TCONS_00050527 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050527
Unique NameTCONS_00050527
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050527 ID=TCONS_00050527|Name=TCONS_00050527|organism=Clytia hemisphaerica|type=transcript|length=1923bp
GTTAGGTTGTTTTCTCGTTACCGTGAAAGCTGTTGAAGTTGAGCTCAAAT
TCTTTCAAACTGAATTCTTTTCTAGTAGGGGTTGATCTTACATAACGTTT
CAGAAGTAGCAACAAATCTTTTCAAGATTTCGTCGTGTGAATGGGAAAAG
TTTCATTTCGCAAAACAGCTTCTCAGCAAAACTATCTGTACTTTTTGCAA
GAATACCAACAACAGAACGTATTGTCTCTACGAACAAGAACTCAGgtGAC
TCAAGGTGCCCAAAAAGTAAGCAAGGAAGGAAAAGAGTCACGTCAAGTCC
TTCCAAGCCTTCGGAACAAGATAAGCTTTGCTTAAAAGAAGTAAAGAAGG
AAGACAACGTAAATATTGAAGCAGTTTGACTTGACATTAAAACCAATTCA
TTCAACGTCTCAAGAGAGTCAAAATGCCGAACAAATGCTTATCGTTGCTA
CCAGTTTCGGCCGCTTTCGTTTTGTTAGCAGCAGCTGTATCAAGCTACCT
CTTGGGATTGCTGCACAAAGGTACTTTAGAGTATGTCCCATACCCAAGTG
ATTTAGGTTTACAACAACCTGAGCTTGGTATATTTTCAACTGGGATTGCG
TTTAGTGGTTCAATCACTTTCGCTGTCATCCTGTTACGTTTTATCCAAGT
TAACACGTTTTATCCAATGGTGTGTTATAAAGCCAATTACATATCTTTCT
TATCTGGTATGTTGATGCTGATTGGTTTATACATGGTACCAGCTTTCCCG
TACGATACACATGCTTTCCTTCACTACATCGGTGCcggaattttcttctt
tttcatgattCTCTTCATGATTACCCAAGCAAGGATCACCCACAAGCATC
CGTATAATCACACTAAATGCTTAGCGAGTTTCCGAATCCTTCTCTGTGTT
TTCGCCTGTGCAACACCGGTTACATTTGTCTGCGGACGTCTACTTGCTCC
TAAAGAGGAACGTTATTATTATATCCCACAAGGCTGTGAATGGTTCCAAT
GTTTACTTTACTTAATCTACATGTGCACCTTCGCATGGGATTTTGGTCGT
ATCCATCTACGTCTAAACAGCTACGAGGTTTGCCCGCGAAGTCCAGATAC
TCGAAAGTTGACCCGCAGGCCGTTAGATGCTCATAGTACAATGTAAAAGA
CGAAATGGAAGATTCATACATGCGGTGAATTGTTTGGAATTTATACTGCT
TCCCAAgtcttggtcttgtctctgtTCGCAAATATTGTAAAAGACAAGAC
TCGCAGCATAATGGATTTTAATGGAAAATTTGGTGTAATTCACACTTTTA
TTATGGATGATATCGTTaaacgattttgatttttttttaagaaaatggaa
atttcaaaGAACGTTCCAAAGCAATGGACAGTGCATCGTGTGCCCATCTA
GGAAACCATTGAATTTTGAATCGTTGGCAAACGAACGTATTTAAAACACC
CTGTCTCAACGGTTGCACGGGGCTATGACAGTATGTGATATGACAgcaca
ataattttttttgatcggAACTTAAACACCTCTTGTGCTATTTTAGGACG
TCCTTCTGTTGTTCAGATGGCTATTTTCATCCTTTTGCAGGTTTTTCCAT
CTCCAAAAGTCTTGATAATAAGTCCCTCGCTTAATTCCAATTTGTACCGA
CCCCCTGTTCGTTTATTAGACACCTAGAGACCTGATGAAAGTGCCTTAAT
TTCCTATGTATAAGCGCGTTTATAAGTATGCCTTGCTCACACTTTATTCA
AGTATTTATAGTTATATTATAAAATTTAGGTATTTTCTTTTTAGAGggtt
ttaatatctttttagaggCATTAATAGCATTTACTTAACATATTTATCTT
ACTCTTCATATTTATCGGCGTGGATATTTTATTCGGTTTTCGAATGATCG
ATAAAAACATCATTCTCTCTTAT
Run BLAST on NCBI

protein sequence of TCONS_00050527-protein

>TCONS_00050527-protein ID=TCONS_00050527-protein|Name=TCONS_00050527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
MPNKCLSLLPVSAAFVLLAAAVSSYLLGLLHKGTLEYVPYPSDLGLQQPE
LGIFSTGIAFSGSITFAVILLRFIQVNTFYPMVCYKANYISFLSGMLMLI
GLYMVPAFPYDTHAFLHYIGAGIFFFFMILFMITQARITHKHPYNHTKCL
ASFRILLCVFACATPVTFVCGRLLAPKEERYYYIPQGCEWFQCLLYLIYM
CTFAWDFGRIHLRLNSYEVCPRSPDTRKLTRRPLDAHSTM
Run BLAST on NCBI

transcript from alignment at scaffold_179:406417..414204+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050527 ID=TCONS_00050527|Name=TCONS_00050527|organism=Clytia hemisphaerica|type=transcript|length=7788bp|location=Sequence derived from alignment at scaffold_179:406417..414204+ (Clytia hemisphaerica)
GTTAGGTTGTTTTCTCGTTACCGTGAAAGCTGTTGAAGTTGAGCTCAAAT TCTTTCAAACTGAATTCTTTTCTAGTAGGGTAGTTAGTGCTTACTTTTTT GCAAATATCGTCTGTACTTGCTTATTCCTCCCGGGtccctaatagccgcc cccccccccgctaattaatttttcgaaaattttcccccccggacattttt ttcccccccccccccccccgctaattaatttttcgaaaattttccccccc ggacatttttttcccccccccccccccccgctaattaatttttcgaaaat tttcccccccggacatttttttcccccccccccccccccgctaattaatt tttcgaaaattttcccccccggacatttttttcccccccccccccccccg ctaattaatttttcgaaaattttcccccccggacatttttttcccccccc cccccccccgctaattaatttttcgaaaattttcccccccggacattttt ttcccccccccccccccccgctaattaatttttcgaaaattttccccccc ggacatttttttcccccccccccccccccgctaattaatttttcgaaaat tttcccccccggacatttttttcccccccccccccccccgctaattaatt tttcgaaaattttcccccccggacatttttttcccccccccccccccccg ctaattaatttttcgaaaattttcccccccggacatttttttcccccccc cccccccccgctaattaatttttcgaaaattttcccccccggacattttt ttcccccccccccccccccgctaattaatttttcgaaaattttccccccc ggacatttttttcccccccccccccccccgctaattaatttttcgaaaat tttcccccccggacatttttttcccccccccccccccccgctaattaatt tttcgaaaattttcccccccggacatttttttcccccccccccccccccg ctaattaatttttcgaaaattttcccccccggacatttttttcccccccc cccccccccgctaattaatttttcgaaaattttcccccccggacattttt ttcccccccccccccccccgctaattaatttttcgaaaattttccccccc ggacatttttttcccccccccccccccccgctaattaatttttcgaaaat tttcccccccggacatttttttcccccccccccccccccgctaattaatt tttcgaaaattttcccccccggacatttttttcccccccccccccccccg cttattaagttttgagattttttccaacccccctgcttattccaaccccc ttggctattaggtacccgagagtaaaaaTTAGAATTTGAACATTCAAAAT CTAACAATCTCATTTTTAAGATTTGCTAGCAAGCTTTGTACGAAAATCAA TCGATGATGCTAATCTGAAGGCTACTCAGAAAATAtgagattaaaatata ttgttaTCATTGCAAGTCGTTAAGATGATGTAATCTATTGTCAAGTTTTG AATTTGATAATCGATACTTTACCATCCCAACACCATATGACATTTTTATa agctttttttttatttccacaAATACTCTATCAAAAAGAATAATATTGTA CTGAAAAAAAGATCAACACGAATTTTGAGTAACCTTTTCTAGATTGTGAC GGACAGAGACTTGTTTTTTTGACGATTTGACTATTTCTAATTCGTTTTAG GTCAAACCTTCATTCAGATGACTCGATACACGAAATCTTTTTTGCACAAT TTTCAcataatgatattttttgtcCTTCTTTATTAGGGTTGATCTTACAT AACGTTTCAGAAGTAGCAACAAATCTTTTCAAGGTACAGTATGAtccatt acacgtttttttataagaacatctacaatttttgaagcctttggatgttc ttattttcaccattttgtgaccatttttaaaatttttttgagtccacaaa gccttaaaatgttcttaacaagtCTTTTGtgcttatatagtttgttccca taaaaaaaacgtgtaatgacCGTTACTTTAGCACTTATCGCATTTGGGAC AAGGGTCCTTTCATATTCCAATATTCTGATATTTTTGTTGGCTTCAGTTT TTAAGAGGcaagaaaataaattgtttattcttggtgTGTGTAAAGTCTAG AGTCTAAGACagaaagtacacgtttttttataagaacaaactatatagga acataaggcttcgatggccaatatgttaagaacaagttaagaacatttta agactttgaggactctaaaatacccaatttcttagaaaaacggacaaaag tactcaaaaaatggcgaaaataagagcatgttaagaataatttttagact tgaaacccaaaaagttaagaacatctcaaggcttcaaaatttttagatgc tCTTAtacaaaaacgtgtattcagAGTCATCTTGATGTGTTGATAGGGAT TAGTAATCTGTGTGACTATCCAGTATTTTATCACGAGGGACATACtactc aaaaattgttttttaattcgGAAATTGATTTGTTTGAATTATCAAAAATA CCTTGACAATGTAAAGGTAAATAGGATTATACTCATTAAACCAAATTTCT TCAAAACTCTCAGTAGAGTATTAATCAATTTCTATGTCTTTATCATTTTA AGAGAGTCATGTAGTTTATGTTGTTTTAATTTGATTCATTATAGATTTCG TCGTGTGAATGGGAAAAGTTTCATTTCGCAAAACAGCTTCTCAGCAAAAC TATCTGTACTTTTTGCAAGAATACCAACAACAGAACGTATTGTCTCTACG AACAAGAACTCAGGTAAACACATCATGATTTTATGTtacgtctttttata agaacaaactatataagaataagGCTTCataaccaaaatgttaagaaggA TTTGTAAACTCTAAAACagccgatttcttagaaaactAGACAAAAATACC CAGAAAATTGAATGCTTAGAATAAGAACTTGgtaagaacacttttaggct taggtttaaaactcaaaaaagttaagagcattcgaaggcttcaaatattt ttgatgttcttattaaaaaaacgtgtacagtatTATGTAAAAGTAAACTT TTTCTCCTTCCCATAAAATATTACCATGTATTAAAACTGCTTTCATTAGT TTGCTACTGGTGCTGATtcttttgtatgtatttttgaattttttaaggaC CTAACCCTCGCAATCCTTGGTACAGTCCTAGACTAGAATTATAGGCTTTT TTtactaaaaagttttgtttttaaataagagtgatatcaattttaattta caagctttttcgcattgaattgacacggatgtggagcaagactggtcaga aagaggaaaagaaaaacatttttgcttatGGTATCAACAGATATCAAccc aatacacgctttttcttttataagagtgtactttggatgagggtcaagta ttcttaagaaagtgccaaaattgagggtgaaatgttcttaacgtattctt acttttttgagACTTGCCTTTTTCACAAACATGAGattgatcaatttgag agttttggacttttgagtgaaaatttgggttaaaattacatttcttcctc aaagcttcaatttatctctaacaaaggaagcagtttgactgtattcttat caaattctgtgaaattcacctcagaaaaaaagcgtaaaaaagaaaagtcc tgatatgaaacatgtgtctgatatactgatatgaaacggggacACTTTAG TAAATATGAAACCTTTAGGAAATTTTGTAGTAAAGAAGTTACATTGAATT GGAATGTTACTGCTGCGTGTTTAGTCAACGATTAGCCATCTGTCAACGAT TATACAAACCCCGGGAgggaggggggtacttaggcaaaaatggatgatgg gtatgtgcggacggtaagggtcggttttttcacctttcaaagtctctcta agggtcggaaaaatcaggaTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNACCCTAGAgagtattcttagggtatttttatg atttggccaattttcatcctgatattcttatagaagatattcttataaaa aaagcgtgtataataATAAGTAGActctgtcctgatatgaaacatgtgtc tgatatgagacGGGAACACTTTTGTAAATATGAAACAGGTGAAACCTTTA AGAAATTTTGTAGTAAAGAAGTTACATTGAATTGGAATGTTACTGCTGCG TGTTTAGTCTCTGGTACATGAATTTGTTCAGGTTTTCTAGCTATTGAACT GATATTTTGGAAGACATTAAAAACGTAATCAGCATAGCTTTGAATGGATT TTGAAAGCCTTTAGTTGTTACAACAATATTAGAGACCACTTTCGAAAGTC TACGACTGCTACAAACCCCCATTTGTCAACAATTATACAAACCAAGCCCC ATTCAAAAGCTCATCCCTTGAAGTGCATATATTTtgatattggaagttta tcgtggcttggatcacaagatttacgtttggctacgtttcgagagattct tttCCCATAATCAGGCAAGGTGGAGGGTGTTTTCTTCTCTATTATGGGAG AaaaatctctcgaaacgtagccaaccTTTAAATCTTGTAATCCAAGctac gataaacttccaatatcaAAATATATAAGCTTCAAGGGACGAGCTTTTGA ATGGGGTTTGGTTTGTATAATCGTTGACGAATGGGGGTTTAAATCACCGG ATCGATAAACTCAAACTTATTTAGCTTACATTTTGATAAAGGGGTCATCT TCTATTACACTGGAGAGTGTAActaatttttctctaaaaattaaGGCACA ATAAGAGCAATTTAAAagccgagcctcaacaaaaatttactagTTCTTAT GAAGAAAGGTCTGTATAATACACCCCCTTcccacagacccggtaggactt tttcagccagtgtggataaaaacaacagaaagaaactcgatattttttat agctGGGGACTTCAATTCATTATGTTTTCAAGTAGGTagaaaattcaatg gggatggCAAAAATAGTAaattattttgcagtgaggattggttaatttga ttattttcagtggggcaaaaattggaggatgattttccaccggggacgat atttttagggaaggggtcccagtgggtctgtgagcaGGTGGTGTTATAAT ATTATATtgctcttcttcattttcaggtGACTCAAGGTGCCCAAAAAGTA AGCAAGGAAGGAAAAGAGTCACGTCAAGTCCTTGTGAGTATAGTCCTTTG CTACTTTGAGTACATTATTgagcaaagaaaaaaatcaattatttaaTCTT GAGCGctgaatatttctttttatacTTCTCGCTGTGGTAACTGTTCCCGC GCAACAAGATGGTACTGTTCCATTGAATAAAATCATTCTGAGAATAAATT GGCCAAACATTTTACTACCGATAAGGATCTTTTCTTTTAGAAGgcttata agaacaagctagaaaaattgaattttcagaaaactTGACTTCTAAAGGCT TCCTCGACAGTACAGAAACAAATTTACCCTTATTTCACTTAGATTGATTT CTGAAACGACAGGATCAACTGAATAGAAAAGTTTGAAGCATATTGCTCCC TAGTTCAAGAGTTCTTTCAAGATAGCTTTGTTATACCATCTCGTGTGTTT TTGCTTGTAACACGTACGAGAAAAGAGTCTTGTGGCGAATGTACTAGTGT ACTATTGATATATTATTTTCACCACGCACAGTTTcttaataaaaaattta ttattagTTATTATTACAAGGTTACTCTGATCAACGAAATGAAAATCGCT GTACccttttttaataactttttcccTCTTTTCTTAACACGAAATAGATG TTTCCCCATATCTTTCTCTCTGTAAAAAAATGacgtattttttttctttc tttctcatttcTTAAAGCCAAGCCTTCGGAACAAGATAAGCTTTGCTTAA AAGAAGTAAAGAAGGAAGACAACGTAAATATTGAAGCAGTTTGACTTGAC ATTAAAACCAATTCATTCAACGTCTCAAGAGAGTCAAAATGCCGAACAAA TGCTTATCGTTGCTACCAGTTTCGGCCGCTTTCGTTTTGTTAGCAGCAGC TGTATCAAGCTACCTCTTGGGATTGCTGCACAAAGGTACTTTAGAGTATG TCCCATACCCAAGTGATTTAGGTTTACAACAACCTGAGCTTGGTATATTT TCAACTGGGATTGCGTTTAGTGGTTCAATCACTTTCGCTGTCATCCTGTT ACGTTTTATCCAAGTTAACACGTTTTATCCAATGGTGTGTTATAAAGCCA ATTACATATCTTTCTTATCTGGTATGTTGATGCTGATTGGTTTATACATG GTACCAGCTTTCCCGTACGATACACATGCTTTCCTTCACTACATCGGTGC cggaattttcttctttttcatgattCTCTTCATGATTACCCAAGCAAGGA TCACCCACAAGCATCCGTATAATCACACTAAATGCTTAGCGAGTTTCCGA ATCCTTCTCTGTGTTTTCGCCTGTGCAACACCGGTTACATTTGTCTGCGG ACGTCTACTTGCTCCTAAAGAGGAACGTTATTATTATATCCCACAAGGCT GTGAATGGTTCCAATGTTTACTTTACTTAATCTACATGTGCACCTTCGCA TGGGATTTTGGTCGTATCCATCTACGTCTAAACAGCTACGAGGTTTGCCC GCGAAGTCCAGATACTCGAAAGTTGACCCGCAGGCCGTTAGATGCTCATA GTACAATGTAAAAGACGAAATGGAAGATTCATACATGCGGTGAATTGTTT GGAATTTATACTGCTTCCCAAgtcttggtcttgtctctgtTCGCAAATAT TGTAAAAGACAAGACTCGCAGCATAATGGATTTTAATGGAAAATTTGGTG TAATTCACACTTTTATTATGGATGATATCGTTaaacgattttgatttttt tttaagaaaatggaaatttcaaaGAACGTTCCAAAGCAATGGACAGTGCA TCGTGTGCCCATCTAGGAAACCATTGAATTTTGAATCGTTGGCAAACGAA CGTATTTAAAACACCCTGTCTCAACGGTTGCACGGGGCTATGACAGTATG TGATATGACAgcacaataattttttttgatcggAACTTAAACACCTCTTG TGCTATTTTAGGACGTCCTTCTGTTGTTCAGATGGCTATTTTCATCCTTT TGCAGGTTTTTCCATCTCCAAAAGTCTTGATAATAAGTCCCTCGCTTAAT TCCAATTTGTACCGACCCCCTGTTCGTTTATTAGACACCTAGAGACCTGA TGAAAGTGCCTTAATTTCCTATGTATAAGCGCGTTTATAAGTATGCCTTG CTCACACTTTATTCAAGTATTTATAGTTATATTATAAAATTTAGGTATTT TCTTTTTAGAGggttttaatatctttttagaggCATTAATAGCATTTACT TAACATATTTATCTTACTCTTCATATTTATCGGCGTGGATATTTTATTCG GTTTTCGAATGATCGATAAAAACATCATTCTCTCTTAT

Coding sequence (CDS) from alignment at scaffold_179:406417..414204+

>TCONS_00050527 ID=TCONS_00050527|Name=TCONS_00050527|organism=Clytia hemisphaerica|type=CDS|length=723bp|location=Sequence derived from alignment at scaffold_179:406417..414204+ (Clytia hemisphaerica)
ATGCCGAACAAATGCTTATCGTTGCTACCAGTTTCGGCCGCTTTCGTTTT
GTTAGCAGCAGCTGTATCAAGCTACCTCTTGGGATTGCTGCACAAAGGTA
CTTTAGAGTATGTCCCATACCCAAGTGATTTAGGTTTACAACAACCTGAG
CTTGGTATATTTTCAACTGGGATTGCGTTTAGTGGTTCAATCACTTTCGC
TGTCATCCTGTTACGTTTTATCCAAGTTAACACGTTTTATCCAATGGTGT
GTTATAAAGCCAATTACATATCTTTCTTATCTGGTATGTTGATGCTGATT
GGTTTATACATGGTACCAGCTTTCCCGTACGATACACATGCTTTCCTTCA
CTACATCGGTGCcggaattttcttctttttcatgattCTCTTCATGATTA
CCCAAGCAAGGATCACCCACAAGCATCCGTATAATCACACTAAATGCTTA
GCGAGTTTCCGAATCCTTCTCTGTGTTTTCGCCTGTGCAACACCGGTTAC
ATTTGTCTGCGGACGTCTACTTGCTCCTAAAGAGGAACGTTATTATTATA
TCCCACAAGGCTGTGAATGGTTCCAATGTTTACTTTACTTAATCTACATG
TGCACCTTCGCATGGGATTTTGGTCGTATCCATCTACGTCTAAACAGCTA
CGAGGTTTGCCCGCGAAGTCCAGATACTCGAAAGTTGACCCGCAGGCCGT
TAGATGCTCATAGTACAATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031998XLOC_031998Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050527-exon-scaffold_179-1491911889:406417..406495TCONS_00050527-exon-scaffold_179-1491911889:406417..406495Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1510915933:406417..406495TCONS_00050527-exon-scaffold_179-1510915933:406417..406495Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1575043694:406417..406495TCONS_00050527-exon-scaffold_179-1575043694:406417..406495Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1491911889:408253..408299TCONS_00050527-exon-scaffold_179-1491911889:408253..408299Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1510915933:408253..408299TCONS_00050527-exon-scaffold_179-1510915933:408253..408299Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1575043694:408253..408299TCONS_00050527-exon-scaffold_179-1575043694:408253..408299Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1491911889:409161..409279TCONS_00050527-exon-scaffold_179-1491911889:409161..409279Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1510915933:409161..409279TCONS_00050527-exon-scaffold_179-1510915933:409161..409279Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1575043694:409161..409279TCONS_00050527-exon-scaffold_179-1575043694:409161..409279Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1491911889:411843..411899TCONS_00050527-exon-scaffold_179-1491911889:411843..411899Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1510915933:411843..411899TCONS_00050527-exon-scaffold_179-1510915933:411843..411899Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1575043694:411843..411899TCONS_00050527-exon-scaffold_179-1575043694:411843..411899Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1491911889:412584..414204TCONS_00050527-exon-scaffold_179-1491911889:412584..414204Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1510915933:412584..414204TCONS_00050527-exon-scaffold_179-1510915933:412584..414204Clytia hemisphaericaexon
TCONS_00050527-exon-scaffold_179-1575043694:412584..414204TCONS_00050527-exon-scaffold_179-1575043694:412584..414204Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050527-proteinTCONS_00050527-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:406417..414204 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.193472 0.356556 0.705508 0.67737 0.552647 0.445941 4.93504 4.23843 0.97798 0.963623 9.11989 12.4137 6.60356 8.93716 25.5073 24.0386 3.75154 7.02499 10.1892 14.5136 9.4411 6.51491 6.63809 9.1449
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019402Frag1/DRAM/Sfk1
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050527 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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