TCONS_00050319 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050319
Unique NameTCONS_00050319
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1307

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050319 ID=TCONS_00050319|Name=TCONS_00050319|organism=Clytia hemisphaerica|type=transcript|length=1307bp
ANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGA
AAACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAG
TAGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTC
ACGTTACATCATTTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGC
TCACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccg
ccaaattacCCAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGC
CCAGGAgaagaagaaaagttttttgaagaagGTTCAGACATTTTGAAAAG
AGACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTT
ACGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCC
GCTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAA
CGAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATG
TCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAA
TACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCA
CGAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAA
ACGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCT
GTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGA
GAAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAA
AGAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCG
AGCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGG
AAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAG
CAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGT
GCTGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCT
GCAGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaata
attggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttatt
acaggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagct
tgtcccccaaatttggccctgttttacttgattttgtcctccagcgaatt
aatttga
Run BLAST on NCBI

transcript from alignment at scaffold_169:365230..376986+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050319 ID=TCONS_00050319|Name=TCONS_00050319|organism=Clytia hemisphaerica|type=transcript|length=11757bp|location=Sequence derived from alignment at scaffold_169:365230..376986+ (Clytia hemisphaerica)
ANAGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAG
TCTTTTTACATTAAGTAAATTTTCTCTAATTTGAATCTCTATTACGTGAC
TTTTCCTcccgttcaaaactttttgaacgtaagcaaactctacataaGGC
ACTCTTCAAGGTCttacgtaaaattttacgtacatgtgaaaaaagcttta
cttttgatagaatgaattcacaaaaaaaattataaagacagttttttgtt
aaaagtgtaaagGAATTTAAATCAAAGATTTTATCTTCAAACCTCTTAAC
CGATCTTATGACTGCTGTACAAAACATAATCTTATATGTCTTAAATTTAT
TTGACCTTCGGTGGTATTAATTTGAATAGAAATAAATTCAACTTGTATTG
GATTAGTTTCCCCACTTAATTATTACATGCATAATAATTTATGGCCCCCG
AAACGTCGATCAAATATAAAGCAAGATTCGcacaaatgcgactaaatatt
tcccttacacttgcagatggactgcctgatcgaaaaaaaaaaacgtttca
actTGAGGCCGTCCAGGCTTGCCCACCGCACTGGGCTCGACTTCAGTAAC
Tttcgaattatttattatttaaaggtctgattgtagcagtttaagatttt
gaataaaatgaaaactcgaccccaggcccaaaaatcaaaattttcaaaaa
agaaatacgGTTTGTctcttagccaatcagattgcttatatttttcaagt
tcaggaaaggaaaacaaaattcgagttatggagccaAAAAAGGGGAACAT
TCGATATAtggaggtttttttataagagtttattaggagattttcatgct
gccaacgaattttttcgagttaaggagatgttcgagtaatagaggttcga
gttatggagactctactgtatttaaaaaagtaagctcatctccaggataa
gatgataaaaactTCGGGCATTACGatacgcttataaaaaagtgtaggct
aaaaatatagaaaaaaggGCTTGGTACTGAAAGGGTTCACagcatacact
ctttttttataagaacaatcaggCTTAGACTGAAACAATATGTCTATCAA
GGAAACCAGCACAAATGGGATAGGGCAAATAAGCAGTTTTTATTGGAATC
ATAAAGGCAAAGGTCAAGGAATTGCATTGTNGACAAAGTTTATATTTTTC
CGTGTACGAAATATCGGACAATAGTTTTTCTATCGACTTATTTTTCGAGA
GTGTAAATAATCAATCTGCTCaacaagcagacaaggtttgttttatcgac
ctcttcttcgagaatgtaaatcaatctgctcaagcagacaaggtttgttt
tatcgacctctttgtcgataatgtaaatcaatctgctcaagcagacaagg
tttatatttttgccgTGTACCTCTTTAGTGATCAAGCACTGTTGTTTACT
CACGCTGTTGGTGATCAATGCTTCCTTAATCACCAGCACACTGTATGGCA
CTTTtaggagaaaaaaaagaaaaaagaatatgcatccaaaaacttcaaaa
atcctTAGGAAAAAGATCCCTGAAAGTCACTTTTAAAGCTGTCTGACTGT
CTGAAAAATAACCAGAGAGAAAGTCTNTCAGTCGAGGTGACAACCAAAAC
AGTCCAGAACATGCACCACATGGTGAGTTAAATTTCCTCAATAAAAATCG
CACATTGATTAATCCTGACTAAAGGTTTTACACTATAGGCAACAGTTCCG
CCTCGCTACACAAATGCCTCGCTGCACAAATCGATCGGGAGAGGCGTGGG
CGTTATtaagggcgcaaaaagggcgtaagtagccaaggatcgaagaaatg
cctttttaactaatatttccccttatagcggggaaatattcaataaaatt
tctctcaaatctattCTAGATTGGGAGGAAAGAAAATTCAGaggttttac
aaagatttttgctgcatgCAAAACTTTatcatctctactttatttctcga
aagtctttttcaaaattttcaatctcaacaatatttttcaatcgcttaaa
actattttctaatgccccccccccaaaaaacgTAGGTTTTTTCgcgattt
ctcgagatctcTTTAAGGTAGGACtatattaaaattttgaccatagtttg
gaaatgtgatttagagggttttgggcagaaatttgtttgataaagcTTTT
AAAGTATACCCCTGGTAGTTAAAGgtcaggtttggggcccccaaaatgTA
GGTGTATTTAAAATCATAAGCCCATtggtaatagggggagaaactataca
tttttattctcccttaaatttacgacccgatgaatgtaaaattttgtgat
tcataaaatattgcaagattttcgatgatgcaaagtccaaactaaaaatt
tataaattttcaaaataacaattATCATTTAACGACTTCttaattaaccc
tttaagtgccacggtcatttttttttctaagttttttaaagaaaatcgcc
agttcaaactttaaaggctaatatctccggatctagaaggagttagaagc
tcgtttatagtccgTTGGATAGATTAGaatctcctctttcttttaggcgc
ctTTGGCGCCGCCTAATTTAGGAAGGGTGGGGTGCGCGGCGGCTAAAGGG
AGGGAGGTAGTAAGggaaattaaagcagtcaggcctgaatgatagaaaga
tgcCCAGTGAAACTTCAAATTATTTCGCTGGAAGACAGAATCGAGTAAAT
CAGGGCCAAATTttgaggttcttggatcactcgttgaccaaaaatggtca
aaaaacggtcaaaatcttaaaaaagtggatttttgtcaaatttttgtatt
tgttttactttttagcttaaaatctcgctgaaaagactcacttttgattt
ttttttgcttggccgTAAAGctcaatccaattcctacgagttcgaccaaa
atgacgatttctaactcaaactgggcattacaggagggcttcacCCCAAT
Gtttgatatatacgacattggcacttaaagggttaagtttcagaaaacca
gtttctctcctatattttgaaaagaatAGAATTTCCCGTTTTCGCTGATT
CAGTGaacatttttatatataatgttaattttctgTTATAAACTAGCAAG
TAAAGCTGGTAGGAAGggaattccaaatttttttgctgttactcatattt
agaatttcggttttatcaatgctgattcttaGGGCCCgaaaaatactggt
tgaccttaagatgctatatcttttactcTTCATAAAGTCACAGATATATT
AGACTAGAGTCtgcttctgactgaactttgctttttgatggcggtgagtc
cagtgaagtagactatgagcatttgacgaggtttccattttgaaaaagaa
attttaaaatccaaataacaaaaaagctacttgaagttgaaaattttaat
taagaatgagaaacaaacatcaataacagattttgaatcccttattttca
aataaaagcattgcttcattcttttttttacctggcaaaaacaacgaact
gttttacagtccgcttaagcaaaagcatattaccatactgggccatccag
tctataaaaaagctttaagtggaccccgggctacagATGTATCTGTATTT
TCTGAAacgcattaggtgtagaaagctCCAAGGAGCTAGAATGAGTTATA
TGAAATTtctatctaattttggtgttgtaatattttcttcagacgcaaat
atgttattttgaatctgtttcaaaccatcaaaaacatactTATTTTAAAG
CATAatcatcattctttcaaaataaacaaaaatcgtttaattatctgata
aatctacaggtcagaatcctcgtgtccgttttgggggccatatactgtac
aaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTGGAG
AGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAACTT
CATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCAT
GTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTTA
CATCATTTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACGA
TTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaat
tacgtaagttttttttcagattatgtAGTCTAGTAAGCTAGACGATCAAt
ccagacatagtagaaataaagcaaaaagtaatggagggaacaatttttat
acaaactaaatcccatAACAGTAATCgcattatcatataacgcctataac
ACACAATATAAACTCCAGTCTCCAGATTATGTTGACATATCTTATCTCAT
ATGATTCATGATTTTctagatcctgattgactgGGGATGACGGTTGTTGC
TTCAGTCCACATACATAAGCTCACTTGTCGAAAATTANAGCTAGAATGAG
TTATATGAAATTtctatctaattttggtgttgtaatattttcttcagacg
caaatatgttattttgaatctgtttcaaaccatcaaaaacatactTATTT
TAAAGCATAatcatcattctttcaaaataaacaaaaatcgtttaattatc
tgataaatctacaggtcagaatcctcgtgtccgttttgggggccatatac
tgtacaaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACG
TGGAGAGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAA
AACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGT
AGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCA
CGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCT
CACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgc
caaattacgtgagttttttttctgattatgTAGTCTAGTAAGCTAGACGA
TCAAtccagacatagtagaaataaagcaaaaagtaatggagggaacaatt
tttaTACTAACTAAATCCAATAACAGTATTCgcattatcatataacgcct
atactactgtattataCGCATTATAAACAACTCCAGTCTCCAGATTATGT
TGACATATCTTACATGATTCATGATTTTctagatcctgattgactgGGGA
TGACGGTTGTCGATTCAGTCACTCCGCCGTCCTCacaagtgcaaatacat
aagcTCGCTTCTCGAAAATTTATGTGATTTAGGTGATCTTTTATATAGGA
CTGAAAtggatttttcattttcatttcttctCTTAAAACAGCCAAAGGAG
CACACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaag
ttttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGA
AAATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAA
GtaagctaaaaatatttttatttttctcttttacatTCCCGTGTTGCAGA
TgtctgccccttggtcaggGTTGTATATGCTTGAGCTTTCAAAGCATCAA
GACATAACCTTATTTGATGTTTATGAAGTGGTTATTGCCATAAATGCTGC
AATGTCGTGTATGCTTATATGCTGAATAAAAGCTTATGGAACTGTTCGAA
TTTTAAAAGCAGTGAAATATGAAGAAACGCGAACTTTAGCCCTTTTAGCG
GAAGTCTTTGAAATTTCTTGGAAGGGCCATTCGAAAAactttatgctcgc
gaaaaattcttgataaaaaatggaaaatctgtaaaacttcaaactttgaa
tgaaaTGTAAGAAGTAtagcactttttagcctgttaaTAAGTCAAAAGAC
AATAGTTCACATTCAAGaagccattttttcaaatgaaaatttatttcttg
ATTCACTCAAGGTTTATGCTCAGGAAAAAGATCTTTTCGTCGAATtcacg
aaagtaaatgtcgcaaatttcctgaattttctACCTCTCCAAAACTTCTG
CTCgagaaagtttgtacgcctatagtatgcttatgttatgctgtTAATCT
CACATAACTATCGTTCAACTATTCCAACTTATGATTTGAACTTAATCGTA
ACTTCCCTCCGAACTTAAATAAACctctttttctccattttcttTAGATT
CCCAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAA
ACTTGTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTAT
TATCGCTGGCGGAGGGTAAGTTTACTGTTTTTTCCTTACATAGAAAAAAA
AGTACTTACTCCAGGATGACTTGGCTTTTCCGTTCCCGGATAAATATTCC
TGGTACATTTCTGAAATCTTTCCGCTGCTTTCCCTGGGTTGCCTACAAAC
AGTCTCGGTCTATTTCAGTTGTAAAGGAATATTTAGCCGGGAATAAGGAA
TTTTAGCCATCATACAGTAATCAAATTCAAGCTGTGGTAAAGGgcgaaat
tcgattttaaaATATATAGTCCGCGGCTAGAAATTGCTTTACGAGAGATT
CGAGCTAATTAATACTTATAATTctctttactttttatttccatTACAGC
TGTTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGG
TCGCGGATGTGAATACAAGAGCACTGCAATCCATGAGGTAAGTAGTCCTT
TTTCAACAACAATTTGCTCGTTTTTAAACGCTAActctactctgtaccag
agtgtatctcacgtttatcgcttcgtagtacctCTACGGCTTTTTCATAA
ATGATGTCACGACCAGTACCTGTTTTGTTAAATATGATGATGTAATTCTG
TGACAACTTATTTCCACTTTGTTTGCCAAAATTATGTTATGTGAACTCTC
ActaattttctcaaatctttctataatttgaactatCACTCAGCTCCCAT
CCTAATAAAAAACACTTGTACTCTCCAtagttcgaatctctctgttCGAA
CTAATTAGACTTCCCGTTTCACTTTGTCTGTAcccagacccagtatctac
ggctaatttcaaaattcattgccgtagaggtactacgaagcgataacaCT
CTACTTTGCTAGCGTAGGCGGTCAGAGCATCTCACTAGTATAcataataa
ttttataaatataaatatttttttctagactttgcACACATAtgttatat
aatattttcagccgaagagccaaatgtaaattttggagaTTGAAATACTA
GTATACcattattattactattattaagCTTTTCCACTGTACCAATATCA
TACAACACTTTTTCAAATCCAGGCCCCGAGCAAGTTTAAAGTTAGCAATG
ATAGAAGGAAACAAAGCCTTGGGACTTCATATGCGACAATGGTCGAAAtt
ctacagttgactctctctaattcgatcttcaagggacgaaaaattttcct
ttaattGTAAAAAGAATCGGATTATGGGGAGTGTTTTGCACGACTTTCTA
GCCGAAGGAACCAATGCTTTTAtctcgaattatagaaagatcaATAATAG
AGGTTAAAATTAGAGAGAGAGATGAGAgtattttattttccttttatttt
cagTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCG
TGATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGTGAGATTT
AGCAAATTATAAAGCAGATCACCAATAGAGTTTTTGACCTCATTAGCCAA
TCAAATGAAACCTATTCACTGTGAACCAATGGAGTTAAAGGTTTCTTCAT
ATAATATCCCCAACCAGACCTTTTCTGCATACTCAGAGCCAATCAAATTA
AACTTTGTTTATGCGAAATCAACTAAAAACTTGAAAGGgaattttcttag
tttttagtaTTGAAGGGTGTTTTCAACCTTTTCCGTTTCTCCTAGATACA
CATTGTTTTACAAACACTCTTATTTTCGGGTCAGACTTTGCGTTGCTTGC
ATTCTaactcattttctgaaaaatctgccttaaccacccctgatattata
ccatatctAAATTTATTAGGTCAAGGGCTATCGATTGCCATGGTTAGGTT
TTCTAAAAAGCTTTTCCTCTCAGAGATAGTGGAAAAAAACCGGCTAAATT
GAGGCCTCGAGCTTTAGCAACCTAGTTGCTTGTAAAAGAAATATCTATAT
ATATTAAATTACTATCTTAAGTGTACTTAATTTGGTGGTCGGCTAAAATG
TGATTTTTCagcgtgtatttaatttggcggatggcagaatttgtataatt
ttacgGGGATTTAATTTAGCGGATGGGGACATTTCAGGCACTTGTAAATC
ATAAATTACTTGATTTCTTAATAATTCTTACTTTAAAATGCTACTAATTT
TGGAAAGGAATTTCTATCataaagcttttttctaattttgtggatattta
attttgcggatggtaaatttcttaaaattttggcgggTATCTAATTTTGC
GAATCCACCAAATTTAATCtccgccaaaattaatacacttaagGTGTATT
TTCTATTTCTTAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTC
TGTCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATG
AGAAGTAAGTTATAACACTGaactagaattaaaaaaaactggaACGACCT
TCTTCATTTGTTTTGCGGATTTACTTTGTTGTTTATTCGAATTCTTCCAA
GAGATCTCGATTTTTGAAATGACTTGATGATCTCCAAAACCTATAAAGTG
TTGTACAGCTACTCTCGGAGACCTAATAAATGCCTCCTCTAATTCAACGG
TGGTCACACGTTTGTTTATAAAGCTTCGgtggctaaaatattaagaacat
gttaagaacatttgaagacTCTCCGGaatctaaaacacctgatttcttag
gaaaattgataaaaatacagaattgagaatatttcaacctctgaagacca
ataataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcactgactctt
tttaaaaagcattgatgatatttttcagttgtgttttcaacgacgggaat
aaaaatatcaactttgaacttcatccaaaatcttggatggtcgtcacggt
tacttttctctgcgttgattgcgcgctgaatagaatctggattggtagGC
ACAGCGTCGAATTATGATTTCCACCTGTGCTTTTAACGGTAATCACTCCC
ATAAAAGGCGATGAGTTTGGACCTGAttcatcatatttttcaaaacaaat
ttttcataacccaaaacaaaattctttcatctctgtcgattttctgattt
tgtaTAATTTCCCAACCACTATACCTATTAAGTCCATTGTGGGGGAGGGA
GCGTACGAGGCTCCTGAACACCgacaatttttcacaaaattacaACAATA
CcgacacatatttttttcatgtttttattcttCAAAATTCTAATATGAGA
TAAGAGGATAAGAGGGATTTCTGAGAATTTAGCACCGTTTCTCCATCGTT
TTAAGCAAAATTACCGTATCACCGATTGAATGTTATTTAATTAACATTTT
CCGTCATCTAAAAGCATCtcaaacaccgaaataccgacaaattTTTTGTT
GATCACCGAAAAACCGACGCAAAAAAAGGTCAACCGACACACCGACAAAC
TGGTACGCCCCCTCCATTGAGTACCTGTGACTACATGATATGTTTTCAAC
CAGCATTCAACTGACTATTTTTACATTTATTATCAAATCAGAAAACTGGG
AATTACATTTTCATCATTTAGTTTCTTACACTTTCTTTCAGATATGCATT
TTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAA
ATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCC
AAACAACTCAACGCTATGTACTGTGGAGGTATGTACAGTATGTTTATTTT
AACCGGGTTAATTTTTcttgagtttttgatttttgcctTTTTCGCCAAAA
AAAACTTGCGATATTGCATGAGATTGTTGATACGCGAAATTGACTAGTGA
ATAAAGTTACCTTTCGGCTCGGCCTAATTTGTGCATATCATATAAAAGGG
TTTCATGTTTTGTGAGGATGAACTAAAGAACTCAACCATTACTTTTTTAC
AATATCATATTTGCCGAcgaatattaaaaacaaaaattgtttcatcataC
ATCcttaaatacacccctgtctcacagccccggtggaacttttttgcCTC
AGAGGGGGATAAAAAATCCTAtggaaatctcaatggggatagaaattcta
ttgttccaggttaaaaaatctagttaggatggtttttgagtgcaatttta
gaacattgaatttcgaatggggttgaaatcaaagttaatttcccTGAAAT
TTCAGTGTATTTTCCCAGCGGGGACGaaatctttgccaaattttccagtg
agactggggtcccagcgggtctgtttAAGTTAGAAATAAAGTACAACTTT
TCATGATAACATAGCTGCATGCGCGGAACTGAAATTTGTTGGGTATCaga
aaattctatttttaagGGGTTTTTTTAATGTAGAGAAGAAAACAAACATG
ACGCCAGATAATACCCTGGTGTAGGCTGATGCAAGTAGAGAATTAGAGAA
TTAtagaaaagattcaaataatggaagttcgaataagcaaTAGGTGTGCT
GTAgtaattaaatccagaaaatttcgcgatttttttcgctcgcgaaattt
aatctcgcaaaATTTAAGCAATAGGTGTACtgtagttaattttttttctg
tatgGAACGATAAACTAAAGTACACTGTCTTTATCTTCTTATGTTGTCTG
GCAACTTTTTCTTCATCCTTTTTCTTCATCCTTTTTCTAGGTGGCCCTGG
AAAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAG
CAAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGT
GCTGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCT
GCAGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaata
attggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttatt
acaggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagct
tgtcccccaaatttggccctgttttacttgattttgtcctccagcgaatt
aatttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031858XLOC_031858Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050319-exon-scaffold_169-1491911889:365230..365274TCONS_00050319-exon-scaffold_169-1491911889:365230..365274Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:365230..365274TCONS_00050319-exon-scaffold_169-1510915933:365230..365274Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:365230..365274TCONS_00050319-exon-scaffold_169-1575043694:365230..365274Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:369219..369432TCONS_00050319-exon-scaffold_169-1491911889:369219..369432Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:369219..369432TCONS_00050319-exon-scaffold_169-1510915933:369219..369432Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:369219..369432TCONS_00050319-exon-scaffold_169-1575043694:369219..369432Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:370621..370779TCONS_00050319-exon-scaffold_169-1491911889:370621..370779Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:370621..370779TCONS_00050319-exon-scaffold_169-1510915933:370621..370779Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:370621..370779TCONS_00050319-exon-scaffold_169-1575043694:370621..370779Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:371477..371594TCONS_00050319-exon-scaffold_169-1491911889:371477..371594Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:371477..371594TCONS_00050319-exon-scaffold_169-1510915933:371477..371594Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:371477..371594TCONS_00050319-exon-scaffold_169-1575043694:371477..371594Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:371929..372016TCONS_00050319-exon-scaffold_169-1491911889:371929..372016Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:371929..372016TCONS_00050319-exon-scaffold_169-1510915933:371929..372016Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:371929..372016TCONS_00050319-exon-scaffold_169-1575043694:371929..372016Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:372933..373020TCONS_00050319-exon-scaffold_169-1491911889:372933..373020Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:372933..373020TCONS_00050319-exon-scaffold_169-1510915933:372933..373020Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:372933..373020TCONS_00050319-exon-scaffold_169-1575043694:372933..373020Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:373893..373983TCONS_00050319-exon-scaffold_169-1491911889:373893..373983Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:373893..373983TCONS_00050319-exon-scaffold_169-1510915933:373893..373983Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:373893..373983TCONS_00050319-exon-scaffold_169-1575043694:373893..373983Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:375521..375657TCONS_00050319-exon-scaffold_169-1491911889:375521..375657Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:375521..375657TCONS_00050319-exon-scaffold_169-1510915933:375521..375657Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:375521..375657TCONS_00050319-exon-scaffold_169-1575043694:375521..375657Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1491911889:376620..376986TCONS_00050319-exon-scaffold_169-1491911889:376620..376986Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1510915933:376620..376986TCONS_00050319-exon-scaffold_169-1510915933:376620..376986Clytia hemisphaericaexon
TCONS_00050319-exon-scaffold_169-1575043694:376620..376986TCONS_00050319-exon-scaffold_169-1575043694:376620..376986Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:365230..376986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.861279	1.72095	0	0	0	0	1.43851e-09	0	0	0	0	0	0.0429864	0	0	0.0664363	0	0	0.017179	0	0	0	0	0	0	0	0	0	0	0.950627
Blast
[Close]
BLAST of TCONS_00050319 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 9.195e-33
Identity = 86/229 (37.55%), Postives = 120/229 (52.40%), Query Frame = 1 
Query:  280 NGDILFRPGEEEKFFEEGSDILKRDAIRNENA---RWPKA-----RVPYVISSXXXXXXXXXXXXXXXXXXK-TCIRLVPRTNERDYARIIAGGGCYSYVGRVGGSQDLSLGRGCEYKSTAI--HEFMHALGFFHEQSRPDRDQFIRINFGNVQSGMESQFRKQTSSSVTTFNQPYDYVSVMHYEKYAFSKSYGRLATIVPKNNPNQKLGQDVNGGLSSIDAKQLNAMY 933
            N  ++     E  F  EG DI++    R  +A   +WP        VP+++SS   +    +   A     + TCIR V   ++RD+  II   GC+S VGR GG Q +SL   C  K   I  HE MH LGF+HE +R DRD++IR+N+  +  G E  F K  SS++ T   PYDY SVMHY + AFS+    L TI P   P+  +GQ  N  LS+ D  ++  +Y
Sbjct:   59 NQGLILEETPESSFLIEG-DIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLT---PYDYSSVMHYGRLAFSRR--GLPTITPLWAPSVHIGQRWN--LSASDITRVLKLY 279
The following BLAST results are available for this feature:
BLAST of TCONS_00050319 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL9.195e-3337.55Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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