XLOC_031858 (gene) - C. hemisphaerica

Overview
NameXLOC_031858
Unique NameXLOC_031858
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_169:364982..376986+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031858 ID=XLOC_031858|Name=XLOC_031858|organism=Clytia hemisphaerica|type=gene|length=12005bp|location=Sequence derived from alignment at scaffold_169:364982..376986+ (Clytia hemisphaerica)
ttagcatttaaaggtacaaaagataaaaagaaattgGTAATAAACTGTGC CGAGTGGACAAATAATTTGGTTAATAACGCATGCGCAATAAAAACTACAA TCTTTATAAAACCTGACATGCCTTCGCAATCAGAACATTCACCTCGAAGC AAGTAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAGT CTTTTTACATTAAGTtaattttctctaattcgaatctctattaCGTGAAN AGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAGTC TTTTTACATTAAGTAAATTTTCTCTAATTTGAATCTCTATTACGTGACTT TTCCTcccgttcaaaactttttgaacgtaagcaaactctacataaGGCAC TCTTCAAGGTCttacgtaaaattttacgtacatgtgaaaaaagctttact tttgatagaatgaattcacaaaaaaaattataaagacagttttttgttaa aagtgtaaagGAATTTAAATCAAAGATTTTATCTTCAAACCTCTTAACCG ATCTTATGACTGCTGTACAAAACATAATCTTATATGTCTTAAATTTATTT GACCTTCGGTGGTATTAATTTGAATAGAAATAAATTCAACTTGTATTGGA TTAGTTTCCCCACTTAATTATTACATGCATAATAATTTATGGCCCCCGAA ACGTCGATCAAATATAAAGCAAGATTCGcacaaatgcgactaaatatttc ccttacacttgcagatggactgcctgatcgaaaaaaaaaaacgtttcaac tTGAGGCCGTCCAGGCTTGCCCACCGCACTGGGCTCGACTTCAGTAACTt tcgaattatttattatttaaaggtctgattgtagcagtttaagattttga ataaaatgaaaactcgaccccaggcccaaaaatcaaaattttcaaaaaag aaatacgGTTTGTctcttagccaatcagattgcttatatttttcaagttc aggaaaggaaaacaaaattcgagttatggagccaAAAAAGGGGAACATTC GATATAtggaggtttttttataagagtttattaggagattttcatgctgc caacgaattttttcgagttaaggagatgttcgagtaatagaggttcgagt tatggagactctactgtatttaaaaaagtaagctcatctccaggataaga tgataaaaactTCGGGCATTACGatacgcttataaaaaagtgtaggctaa aaatatagaaaaaaggGCTTGGTACTGAAAGGGTTCACagcatacactct ttttttataagaacaatcaggCTTAGACTGAAACAATATGTCTATCAAGG AAACCAGCACAAATGGGATAGGGCAAATAAGCAGTTTTTATTGGAATCAT AAAGGCAAAGGTCAAGGAATTGCATTGTNGACAAAGTTTATATTTTTCCG TGTACGAAATATCGGACAATAGTTTTTCTATCGACTTATTTTTCGAGAGT GTAAATAATCAATCTGCTCaacaagcagacaaggtttgttttatcgacct cttcttcgagaatgtaaatcaatctgctcaagcagacaaggtttgtttta tcgacctctttgtcgataatgtaaatcaatctgctcaagcagacaaggtt tatatttttgccgTGTACCTCTTTAGTGATCAAGCACTGTTGTTTACTCA CGCTGTTGGTGATCAATGCTTCCTTAATCACCAGCACACTGTATGGCACT TTtaggagaaaaaaaagaaaaaagaatatgcatccaaaaacttcaaaaat cctTAGGAAAAAGATCCCTGAAAGTCACTTTTAAAGCTGTCTGACTGTCT GAAAAATAACCAGAGAGAAAGTCTNTCAGTCGAGGTGACAACCAAAACAG TCCAGAACATGCACCACATGGTGAGTTAAATTTCCTCAATAAAAATCGCA CATTGATTAATCCTGACTAAAGGTTTTACACTATAGGCAACAGTTCCGCC TCGCTACACAAATGCCTCGCTGCACAAATCGATCGGGAGAGGCGTGGGCG TTATtaagggcgcaaaaagggcgtaagtagccaaggatcgaagaaatgcc tttttaactaatatttccccttatagcggggaaatattcaataaaatttc tctcaaatctattCTAGATTGGGAGGAAAGAAAATTCAGaggttttacaa agatttttgctgcatgCAAAACTTTatcatctctactttatttctcgaaa gtctttttcaaaattttcaatctcaacaatatttttcaatcgcttaaaac tattttctaatgccccccccccaaaaaacgTAGGTTTTTTCgcgatttct cgagatctcTTTAAGGTAGGACtatattaaaattttgaccatagtttgga aatgtgatttagagggttttgggcagaaatttgtttgataaagcTTTTAA AGTATACCCCTGGTAGTTAAAGgtcaggtttggggcccccaaaatgTAGG TGTATTTAAAATCATAAGCCCATtggtaatagggggagaaactatacatt tttattctcccttaaatttacgacccgatgaatgtaaaattttgtgattc ataaaatattgcaagattttcgatgatgcaaagtccaaactaaaaattta taaattttcaaaataacaattATCATTTAACGACTTCttaattaaccctt taagtgccacggtcatttttttttctaagttttttaaagaaaatcgccag ttcaaactttaaaggctaatatctccggatctagaaggagttagaagctc gtttatagtccgTTGGATAGATTAGaatctcctctttcttttaggcgcct TTGGCGCCGCCTAATTTAGGAAGGGTGGGGTGCGCGGCGGCTAAAGGGAG GGAGGTAGTAAGggaaattaaagcagtcaggcctgaatgatagaaagatg cCCAGTGAAACTTCAAATTATTTCGCTGGAAGACAGAATCGAGTAAATCA GGGCCAAATTttgaggttcttggatcactcgttgaccaaaaatggtcaaa aaacggtcaaaatcttaaaaaagtggatttttgtcaaatttttgtatttg ttttactttttagcttaaaatctcgctgaaaagactcacttttgattttt ttttgcttggccgTAAAGctcaatccaattcctacgagttcgaccaaaat gacgatttctaactcaaactgggcattacaggagggcttcacCCCAATGt ttgatatatacgacattggcacttaaagggttaagtttcagaaaaccagt ttctctcctatattttgaaaagaatAGAATTTCCCGTTTTCGCTGATTCA GTGaacatttttatatataatgttaattttctgTTATAAACTAGCAAGTA AAGCTGGTAGGAAGggaattccaaatttttttgctgttactcatatttag aatttcggttttatcaatgctgattcttaGGGCCCgaaaaatactggttg accttaagatgctatatcttttactcTTCATAAAGTCACAGATATATTAG ACTAGAGTCtgcttctgactgaactttgctttttgatggcggtgagtcca gtgaagtagactatgagcatttgacgaggtttccattttgaaaaagaaat tttaaaatccaaataacaaaaaagctacttgaagttgaaaattttaatta agaatgagaaacaaacatcaataacagattttgaatcccttattttcaaa taaaagcattgcttcattcttttttttacctggcaaaaacaacgaactgt tttacagtccgcttaagcaaaagcatattaccatactgggccatccagtc tataaaaaagctttaagtggaccccgggctacagATGTATCTGTATTTTC TGAAacgcattaggtgtagaaagctCCAAGGAGCTAGAATGAGTTATATG AAATTtctatctaattttggtgttgtaatattttcttcagacgcaaatat gttattttgaatctgtttcaaaccatcaaaaacatactTATTTTAAAGCA TAatcatcattctttcaaaataaacaaaaatcgtttaattatctgataaa tctacaggtcagaatcctcgtgtccgttttgggggccatatactgtacaa TTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTGGAGAG TTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAACTTCA TTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCATGT ATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTTACA TCATTTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACGATT TAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaatta cgtaagttttttttcagattatgtAGTCTAGTAAGCTAGACGATCAAtcc agacatagtagaaataaagcaaaaagtaatggagggaacaatttttatac aaactaaatcccatAACAGTAATCgcattatcatataacgcctataacAC ACAATATAAACTCCAGTCTCCAGATTATGTTGACATATCTTATCTCATAT GATTCATGATTTTctagatcctgattgactgGGGATGACGGTTGTTGCTT CAGTCCACATACATAAGCTCACTTGTCGAAAATTANAGCTAGAATGAGTT ATATGAAATTtctatctaattttggtgttgtaatattttcttcagacgca aatatgttattttgaatctgtttcaaaccatcaaaaacatactTATTTTA AAGCATAatcatcattctttcaaaataaacaaaaatcgtttaattatctg ataaatctacaggtcagaatcctcgtgtccgttttgggggccatatactg tacaaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTG GAGAGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAA CTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAG CATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACG TTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCA CGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgcca aattacgtgagttttttttctgattatgTAGTCTAGTAAGCTAGACGATC AAtccagacatagtagaaataaagcaaaaagtaatggagggaacaatttt taTACTAACTAAATCCAATAACAGTATTCgcattatcatataacgcctat actactgtattataCGCATTATAAACAACTCCAGTCTCCAGATTATGTTG ACATATCTTACATGATTCATGATTTTctagatcctgattgactgGGGATG ACGGTTGTCGATTCAGTCACTCCGCCGTCCTCacaagtgcaaatacataa gcTCGCTTCTCGAAAATTTATGTGATTTAGGTGATCTTTTATATAGGACT GAAAtggatttttcattttcatttcttctCTTAAAACAGCCAAAGGAGCA CACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaagtt ttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGAAA ATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAGt aagctaaaaatatttttatttttctcttttacatTCCCGTGTTGCAGATg tctgccccttggtcaggGTTGTATATGCTTGAGCTTTCAAAGCATCAAGA CATAACCTTATTTGATGTTTATGAAGTGGTTATTGCCATAAATGCTGCAA TGTCGTGTATGCTTATATGCTGAATAAAAGCTTATGGAACTGTTCGAATT TTAAAAGCAGTGAAATATGAAGAAACGCGAACTTTAGCCCTTTTAGCGGA AGTCTTTGAAATTTCTTGGAAGGGCCATTCGAAAAactttatgctcgcga aaaattcttgataaaaaatggaaaatctgtaaaacttcaaactttgaatg aaaTGTAAGAAGTAtagcactttttagcctgttaaTAAGTCAAAAGACAA TAGTTCACATTCAAGaagccattttttcaaatgaaaatttatttcttgAT TCACTCAAGGTTTATGCTCAGGAAAAAGATCTTTTCGTCGAATtcacgaa agtaaatgtcgcaaatttcctgaattttctACCTCTCCAAAACTTCTGCT CgagaaagtttgtacgcctatagtatgcttatgttatgctgtTAATCTCA CATAACTATCGTTCAACTATTCCAACTTATGATTTGAACTTAATCGTAAC TTCCCTCCGAACTTAAATAAACctctttttctccattttcttTAGATTCC CAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAAAC TTGTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTATTA TCGCTGGCGGAGGGTAAGTTTACTGTTTTTTCCTTACATAGAAAAAAAAG TACTTACTCCAGGATGACTTGGCTTTTCCGTTCCCGGATAAATATTCCTG GTACATTTCTGAAATCTTTCCGCTGCTTTCCCTGGGTTGCCTACAAACAG TCTCGGTCTATTTCAGTTGTAAAGGAATATTTAGCCGGGAATAAGGAATT TTAGCCATCATACAGTAATCAAATTCAAGCTGTGGTAAAGGgcgaaattc gattttaaaATATATAGTCCGCGGCTAGAAATTGCTTTACGAGAGATTCG AGCTAATTAATACTTATAATTctctttactttttatttccatTACAGCTG TTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTC GCGGATGTGAATACAAGAGCACTGCAATCCATGAGGTAAGTAGTCCTTTT TCAACAACAATTTGCTCGTTTTTAAACGCTAActctactctgtaccagag tgtatctcacgtttatcgcttcgtagtacctCTACGGCTTTTTCATAAAT GATGTCACGACCAGTACCTGTTTTGTTAAATATGATGATGTAATTCTGTG ACAACTTATTTCCACTTTGTTTGCCAAAATTATGTTATGTGAACTCTCAc taattttctcaaatctttctataatttgaactatCACTCAGCTCCCATCC TAATAAAAAACACTTGTACTCTCCAtagttcgaatctctctgttCGAACT AATTAGACTTCCCGTTTCACTTTGTCTGTAcccagacccagtatctacgg ctaatttcaaaattcattgccgtagaggtactacgaagcgataacaCTCT ACTTTGCTAGCGTAGGCGGTCAGAGCATCTCACTAGTATAcataataatt ttataaatataaatatttttttctagactttgcACACATAtgttatataa tattttcagccgaagagccaaatgtaaattttggagaTTGAAATACTAGT ATACcattattattactattattaagCTTTTCCACTGTACCAATATCATA CAACACTTTTTCAAATCCAGGCCCCGAGCAAGTTTAAAGTTAGCAATGAT AGAAGGAAACAAAGCCTTGGGACTTCATATGCGACAATGGTCGAAAttct acagttgactctctctaattcgatcttcaagggacgaaaaattttccttt aattGTAAAAAGAATCGGATTATGGGGAGTGTTTTGCACGACTTTCTAGC CGAAGGAACCAATGCTTTTAtctcgaattatagaaagatcaATAATAGAG GTTAAAATTAGAGAGAGAGATGAGAgtattttattttccttttattttca gTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCGTG ATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGTGAGATTTAG CAAATTATAAAGCAGATCACCAATAGAGTTTTTGACCTCATTAGCCAATC AAATGAAACCTATTCACTGTGAACCAATGGAGTTAAAGGTTTCTTCATAT AATATCCCCAACCAGACCTTTTCTGCATACTCAGAGCCAATCAAATTAAA CTTTGTTTATGCGAAATCAACTAAAAACTTGAAAGGgaattttcttagtt tttagtaTTGAAGGGTGTTTTCAACCTTTTCCGTTTCTCCTAGATACACA TTGTTTTACAAACACTCTTATTTTCGGGTCAGACTTTGCGTTGCTTGCAT TCTaactcattttctgaaaaatctgccttaaccacccctgatattatacc atatctAAATTTATTAGGTCAAGGGCTATCGATTGCCATGGTTAGGTTTT CTAAAAAGCTTTTCCTCTCAGAGATAGTGGAAAAAAACCGGCTAAATTGA GGCCTCGAGCTTTAGCAACCTAGTTGCTTGTAAAAGAAATATCTATATAT ATTAAATTACTATCTTAAGTGTACTTAATTTGGTGGTCGGCTAAAATGTG ATTTTTCagcgtgtatttaatttggcggatggcagaatttgtataatttt acgGGGATTTAATTTAGCGGATGGGGACATTTCAGGCACTTGTAAATCAT AAATTACTTGATTTCTTAATAATTCTTACTTTAAAATGCTACTAATTTTG GAAAGGAATTTCTATCataaagcttttttctaattttgtggatatttaat tttgcggatggtaaatttcttaaaattttggcgggTATCTAATTTTGCGA ATCCACCAAATTTAATCtccgccaaaattaatacacttaagGTGTATTTT CTATTTCTTAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCTG TCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGAG AAGTAAGTTATAACACTGaactagaattaaaaaaaactggaACGACCTTC TTCATTTGTTTTGCGGATTTACTTTGTTGTTTATTCGAATTCTTCCAAGA GATCTCGATTTTTGAAATGACTTGATGATCTCCAAAACCTATAAAGTGTT GTACAGCTACTCTCGGAGACCTAATAAATGCCTCCTCTAATTCAACGGTG GTCACACGTTTGTTTATAAAGCTTCGgtggctaaaatattaagaacatgt taagaacatttgaagacTCTCCGGaatctaaaacacctgatttcttagga aaattgataaaaatacagaattgagaatatttcaacctctgaagaccaat aataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcactgactctttt taaaaagcattgatgatatttttcagttgtgttttcaacgacgggaataa aaatatcaactttgaacttcatccaaaatcttggatggtcgtcacggtta cttttctctgcgttgattgcgcgctgaatagaatctggattggtagGCAC AGCGTCGAATTATGATTTCCACCTGTGCTTTTAACGGTAATCACTCCCAT AAAAGGCGATGAGTTTGGACCTGAttcatcatatttttcaaaacaaattt ttcataacccaaaacaaaattctttcatctctgtcgattttctgattttg taTAATTTCCCAACCACTATACCTATTAAGTCCATTGTGGGGGAGGGAGC GTACGAGGCTCCTGAACACCgacaatttttcacaaaattacaACAATACc gacacatatttttttcatgtttttattcttCAAAATTCTAATATGAGATA AGAGGATAAGAGGGATTTCTGAGAATTTAGCACCGTTTCTCCATCGTTTT AAGCAAAATTACCGTATCACCGATTGAATGTTATTTAATTAACATTTTCC GTCATCTAAAAGCATCtcaaacaccgaaataccgacaaattTTTTGTTGA TCACCGAAAAACCGACGCAAAAAAAGGTCAACCGACACACCGACAAACTG GTACGCCCCCTCCATTGAGTACCTGTGACTACATGATATGTTTTCAACCA GCATTCAACTGACTATTTTTACATTTATTATCAAATCAGAAAACTGGGAA TTACATTTTCATCATTTAGTTTCTTACACTTTCTTTCAGATATGCATTTT CTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAAAT CAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCCAA ACAACTCAACGCTATGTACTGTGGAGGTATGTACAGTATGTTTATTTTAA CCGGGTTAATTTTTcttgagtttttgatttttgcctTTTTCGCCAAAAAA AACTTGCGATATTGCATGAGATTGTTGATACGCGAAATTGACTAGTGAAT AAAGTTACCTTTCGGCTCGGCCTAATTTGTGCATATCATATAAAAGGGTT TCATGTTTTGTGAGGATGAACTAAAGAACTCAACCATTACTTTTTTACAA TATCATATTTGCCGAcgaatattaaaaacaaaaattgtttcatcataCAT CcttaaatacacccctgtctcacagccccggtggaacttttttgcCTCAG AGGGGGATAAAAAATCCTAtggaaatctcaatggggatagaaattctatt gttccaggttaaaaaatctagttaggatggtttttgagtgcaattttaga acattgaatttcgaatggggttgaaatcaaagttaatttcccTGAAATTT CAGTGTATTTTCCCAGCGGGGACGaaatctttgccaaattttccagtgag actggggtcccagcgggtctgtttAAGTTAGAAATAAAGTACAACTTTTC ATGATAACATAGCTGCATGCGCGGAACTGAAATTTGTTGGGTATCagaaa attctatttttaagGGGTTTTTTTAATGTAGAGAAGAAAACAAACATGAC GCCAGATAATACCCTGGTGTAGGCTGATGCAAGTAGAGAATTAGAGAATT AtagaaaagattcaaataatggaagttcgaataagcaaTAGGTGTGCTGT Agtaattaaatccagaaaatttcgcgatttttttcgctcgcgaaatttaa tctcgcaaaATTTAAGCAATAGGTGTACtgtagttaattttttttctgta tgGAACGATAAACTAAAGTACACTGTCTTTATCTTCTTATGTTGTCTGGC AACTTTTTCTTCATCCTTTTTCTTCATCCTTTTTCTAGGTGGCCCTGGAA AACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAGCA AGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGTGC TGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCTGC AGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaataat tggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttattac aggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagcttg tcccccaaatttggccctgttttacttgattttgtcctccagcgaattaa tttga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050317TCONS_00050317Clytia hemisphaericatranscript
TCONS_00050318TCONS_00050318Clytia hemisphaericatranscript
TCONS_00050319TCONS_00050319Clytia hemisphaericatranscript
TCONS_00050320TCONS_00050320Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050320-proteinTCONS_00050320-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:364982..376986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1449.7 1574.89 1255.27 1125.38 17.35 13.72 2.45 2.88 7.84 6.68 22.24 17.64 0.09 0.11 0.02 0.13 51.02 70.18 0.03 0.1 129.12 126.48 681.9 505.6 83.56 92.36 83.85 76.99 222.59 270.12