TCONS_00050318 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050318
Unique NameTCONS_00050318
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1456

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050318 ID=TCONS_00050318|Name=TCONS_00050318|organism=Clytia hemisphaerica|type=transcript|length=1456bp
ttagcatttaaaggtacaaaagataaaaagaaattgGTAATAAACTGTGC
CGAGTGGACAAATAATTTGGTTAATAACGCATGCGCAATAAAAACTACAA
TCTTTATAAAACCTGACATGCCTTCGCAATCAGAACATTCACCTCGAAGC
AAGTAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGActGGAA
AACTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGT
AGCATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCA
CGTTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCT
CACGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgc
caaattacCCAAAGGAGCACACATTGGGAACGGAGATATTTTATTCCGCC
CAGGAgaagaagaaaagttttttgaagaagGTTCAGACATTTTGAAAAGA
GACGCAATCCGAAATGAAAATGCACGGTGGCCGAAGGCAAGAGTGCCTTA
CGTCATTTCGTCTGCAAATTCCCAAGCAAGAGCTGCTATAACAGCAGCCG
CTAAGGAGTTTGCTGCCAAAACTTGTATTCGATTGGTACCGCGAACGAAC
GAAAGAGACTACGCTCGTATTATCGCTGGCGGAGGCTGTTATAGTTATGT
CGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTCGCGGATGTGAAT
ACAAGAGCACTGCAATCCATGAGTTCATGCACGCTTTGGGGTTCTTTCAC
GAGCAATCGAGACCTGATCGTGATCAATTCATTAGAATTAATTTCGGAAA
CGTCCAGTCAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCTG
TCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGAG
AAATATGCATTTTCTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAA
GAATAATCCAAATCAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGA
GCATCGATGCCAAACAACTCAACGCTATGTACTGTGGAGGTGGCCCTGGA
AAACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAGC
AAGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGTG
CTGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCTG
CAGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaataa
ttggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttatta
caggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagctt
gtcccccaaatttggccctgttttacttgattttgtcctccagcgaatta
atttga
Run BLAST on NCBI

transcript from alignment at scaffold_169:364982..376986+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050318 ID=TCONS_00050318|Name=TCONS_00050318|organism=Clytia hemisphaerica|type=transcript|length=12005bp|location=Sequence derived from alignment at scaffold_169:364982..376986+ (Clytia hemisphaerica)
ttagcatttaaaggtacaaaagataaaaagaaattgGTAATAAACTGTGC
CGAGTGGACAAATAATTTGGTTAATAACGCATGCGCAATAAAAACTACAA
TCTTTATAAAACCTGACATGCCTTCGCAATCAGAACATTCACCTCGAAGC
AAGTAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAGT
CTTTTTACATTAAGTtaattttctctaattcgaatctctattaCGTGAAN
AGCAAACGAAAGAGTTATTGGAGTTAACAAGTCAACTGTCAGAGTAAGTC
TTTTTACATTAAGTAAATTTTCTCTAATTTGAATCTCTATTACGTGACTT
TTCCTcccgttcaaaactttttgaacgtaagcaaactctacataaGGCAC
TCTTCAAGGTCttacgtaaaattttacgtacatgtgaaaaaagctttact
tttgatagaatgaattcacaaaaaaaattataaagacagttttttgttaa
aagtgtaaagGAATTTAAATCAAAGATTTTATCTTCAAACCTCTTAACCG
ATCTTATGACTGCTGTACAAAACATAATCTTATATGTCTTAAATTTATTT
GACCTTCGGTGGTATTAATTTGAATAGAAATAAATTCAACTTGTATTGGA
TTAGTTTCCCCACTTAATTATTACATGCATAATAATTTATGGCCCCCGAA
ACGTCGATCAAATATAAAGCAAGATTCGcacaaatgcgactaaatatttc
ccttacacttgcagatggactgcctgatcgaaaaaaaaaaacgtttcaac
tTGAGGCCGTCCAGGCTTGCCCACCGCACTGGGCTCGACTTCAGTAACTt
tcgaattatttattatttaaaggtctgattgtagcagtttaagattttga
ataaaatgaaaactcgaccccaggcccaaaaatcaaaattttcaaaaaag
aaatacgGTTTGTctcttagccaatcagattgcttatatttttcaagttc
aggaaaggaaaacaaaattcgagttatggagccaAAAAAGGGGAACATTC
GATATAtggaggtttttttataagagtttattaggagattttcatgctgc
caacgaattttttcgagttaaggagatgttcgagtaatagaggttcgagt
tatggagactctactgtatttaaaaaagtaagctcatctccaggataaga
tgataaaaactTCGGGCATTACGatacgcttataaaaaagtgtaggctaa
aaatatagaaaaaaggGCTTGGTACTGAAAGGGTTCACagcatacactct
ttttttataagaacaatcaggCTTAGACTGAAACAATATGTCTATCAAGG
AAACCAGCACAAATGGGATAGGGCAAATAAGCAGTTTTTATTGGAATCAT
AAAGGCAAAGGTCAAGGAATTGCATTGTNGACAAAGTTTATATTTTTCCG
TGTACGAAATATCGGACAATAGTTTTTCTATCGACTTATTTTTCGAGAGT
GTAAATAATCAATCTGCTCaacaagcagacaaggtttgttttatcgacct
cttcttcgagaatgtaaatcaatctgctcaagcagacaaggtttgtttta
tcgacctctttgtcgataatgtaaatcaatctgctcaagcagacaaggtt
tatatttttgccgTGTACCTCTTTAGTGATCAAGCACTGTTGTTTACTCA
CGCTGTTGGTGATCAATGCTTCCTTAATCACCAGCACACTGTATGGCACT
TTtaggagaaaaaaaagaaaaaagaatatgcatccaaaaacttcaaaaat
cctTAGGAAAAAGATCCCTGAAAGTCACTTTTAAAGCTGTCTGACTGTCT
GAAAAATAACCAGAGAGAAAGTCTNTCAGTCGAGGTGACAACCAAAACAG
TCCAGAACATGCACCACATGGTGAGTTAAATTTCCTCAATAAAAATCGCA
CATTGATTAATCCTGACTAAAGGTTTTACACTATAGGCAACAGTTCCGCC
TCGCTACACAAATGCCTCGCTGCACAAATCGATCGGGAGAGGCGTGGGCG
TTATtaagggcgcaaaaagggcgtaagtagccaaggatcgaagaaatgcc
tttttaactaatatttccccttatagcggggaaatattcaataaaatttc
tctcaaatctattCTAGATTGGGAGGAAAGAAAATTCAGaggttttacaa
agatttttgctgcatgCAAAACTTTatcatctctactttatttctcgaaa
gtctttttcaaaattttcaatctcaacaatatttttcaatcgcttaaaac
tattttctaatgccccccccccaaaaaacgTAGGTTTTTTCgcgatttct
cgagatctcTTTAAGGTAGGACtatattaaaattttgaccatagtttgga
aatgtgatttagagggttttgggcagaaatttgtttgataaagcTTTTAA
AGTATACCCCTGGTAGTTAAAGgtcaggtttggggcccccaaaatgTAGG
TGTATTTAAAATCATAAGCCCATtggtaatagggggagaaactatacatt
tttattctcccttaaatttacgacccgatgaatgtaaaattttgtgattc
ataaaatattgcaagattttcgatgatgcaaagtccaaactaaaaattta
taaattttcaaaataacaattATCATTTAACGACTTCttaattaaccctt
taagtgccacggtcatttttttttctaagttttttaaagaaaatcgccag
ttcaaactttaaaggctaatatctccggatctagaaggagttagaagctc
gtttatagtccgTTGGATAGATTAGaatctcctctttcttttaggcgcct
TTGGCGCCGCCTAATTTAGGAAGGGTGGGGTGCGCGGCGGCTAAAGGGAG
GGAGGTAGTAAGggaaattaaagcagtcaggcctgaatgatagaaagatg
cCCAGTGAAACTTCAAATTATTTCGCTGGAAGACAGAATCGAGTAAATCA
GGGCCAAATTttgaggttcttggatcactcgttgaccaaaaatggtcaaa
aaacggtcaaaatcttaaaaaagtggatttttgtcaaatttttgtatttg
ttttactttttagcttaaaatctcgctgaaaagactcacttttgattttt
ttttgcttggccgTAAAGctcaatccaattcctacgagttcgaccaaaat
gacgatttctaactcaaactgggcattacaggagggcttcacCCCAATGt
ttgatatatacgacattggcacttaaagggttaagtttcagaaaaccagt
ttctctcctatattttgaaaagaatAGAATTTCCCGTTTTCGCTGATTCA
GTGaacatttttatatataatgttaattttctgTTATAAACTAGCAAGTA
AAGCTGGTAGGAAGggaattccaaatttttttgctgttactcatatttag
aatttcggttttatcaatgctgattcttaGGGCCCgaaaaatactggttg
accttaagatgctatatcttttactcTTCATAAAGTCACAGATATATTAG
ACTAGAGTCtgcttctgactgaactttgctttttgatggcggtgagtcca
gtgaagtagactatgagcatttgacgaggtttccattttgaaaaagaaat
tttaaaatccaaataacaaaaaagctacttgaagttgaaaattttaatta
agaatgagaaacaaacatcaataacagattttgaatcccttattttcaaa
taaaagcattgcttcattcttttttttacctggcaaaaacaacgaactgt
tttacagtccgcttaagcaaaagcatattaccatactgggccatccagtc
tataaaaaagctttaagtggaccccgggctacagATGTATCTGTATTTTC
TGAAacgcattaggtgtagaaagctCCAAGGAGCTAGAATGAGTTATATG
AAATTtctatctaattttggtgttgtaatattttcttcagacgcaaatat
gttattttgaatctgtttcaaaccatcaaaaacatactTATTTTAAAGCA
TAatcatcattctttcaaaataaacaaaaatcgtttaattatctgataaa
tctacaggtcagaatcctcgtgtccgttttgggggccatatactgtacaa
TTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTGGAGAG
TTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAACTTCA
TTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAGCATGT
ATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACGTTACA
TCATTTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCACGATT
TAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgccaaatta
cgtaagttttttttcagattatgtAGTCTAGTAAGCTAGACGATCAAtcc
agacatagtagaaataaagcaaaaagtaatggagggaacaatttttatac
aaactaaatcccatAACAGTAATCgcattatcatataacgcctataacAC
ACAATATAAACTCCAGTCTCCAGATTATGTTGACATATCTTATCTCATAT
GATTCATGATTTTctagatcctgattgactgGGGATGACGGTTGTTGCTT
CAGTCCACATACATAAGCTCACTTGTCGAAAATTANAGCTAGAATGAGTT
ATATGAAATTtctatctaattttggtgttgtaatattttcttcagacgca
aatatgttattttgaatctgtttcaaaccatcaaaaacatactTATTTTA
AAGCATAatcatcattctttcaaaataaacaaaaatcgtttaattatctg
ataaatctacaggtcagaatcctcgtgtccgttttgggggccatatactg
tacaaTTCACAAAGGTGTTGCCTTTCATTTCTATCTCATTCTTTGACGTG
GAGAGTTTCAAATAACAagtttgtttcttcttttttttctagctGGAAAA
CTTCATTCTCAATATGAAGCTCTCTTGTTTGTTGTTAATGGTTACAGTAG
CATGTATTCACGCTATCCCTAAGGATTTTAAATGGCATGACACGGTCACG
TTACATCATCTTAAGAAAAGCAATGAAGATTTTGGTGATGATGGTGCTCA
CGATTTAACACACGCTAATCTAGTTGATCACGCTTACgacaaatccgcca
aattacgtgagttttttttctgattatgTAGTCTAGTAAGCTAGACGATC
AAtccagacatagtagaaataaagcaaaaagtaatggagggaacaatttt
taTACTAACTAAATCCAATAACAGTATTCgcattatcatataacgcctat
actactgtattataCGCATTATAAACAACTCCAGTCTCCAGATTATGTTG
ACATATCTTACATGATTCATGATTTTctagatcctgattgactgGGGATG
ACGGTTGTCGATTCAGTCACTCCGCCGTCCTCacaagtgcaaatacataa
gcTCGCTTCTCGAAAATTTATGTGATTTAGGTGATCTTTTATATAGGACT
GAAAtggatttttcattttcatttcttctCTTAAAACAGCCAAAGGAGCA
CACATTGGGAACGGAGATATTTTATTCCGCCCAGGAgaagaagaaaagtt
ttttgaagaagGTTCAGACATTTTGAAAAGAGACGCAATCCGAAATGAAA
ATGCACGGTGGCCGAAGGCAAGAGTGCCTTACGTCATTTCGTCTGCAAGt
aagctaaaaatatttttatttttctcttttacatTCCCGTGTTGCAGATg
tctgccccttggtcaggGTTGTATATGCTTGAGCTTTCAAAGCATCAAGA
CATAACCTTATTTGATGTTTATGAAGTGGTTATTGCCATAAATGCTGCAA
TGTCGTGTATGCTTATATGCTGAATAAAAGCTTATGGAACTGTTCGAATT
TTAAAAGCAGTGAAATATGAAGAAACGCGAACTTTAGCCCTTTTAGCGGA
AGTCTTTGAAATTTCTTGGAAGGGCCATTCGAAAAactttatgctcgcga
aaaattcttgataaaaaatggaaaatctgtaaaacttcaaactttgaatg
aaaTGTAAGAAGTAtagcactttttagcctgttaaTAAGTCAAAAGACAA
TAGTTCACATTCAAGaagccattttttcaaatgaaaatttatttcttgAT
TCACTCAAGGTTTATGCTCAGGAAAAAGATCTTTTCGTCGAATtcacgaa
agtaaatgtcgcaaatttcctgaattttctACCTCTCCAAAACTTCTGCT
CgagaaagtttgtacgcctatagtatgcttatgttatgctgtTAATCTCA
CATAACTATCGTTCAACTATTCCAACTTATGATTTGAACTTAATCGTAAC
TTCCCTCCGAACTTAAATAAACctctttttctccattttcttTAGATTCC
CAAGCAAGAGCTGCTATAACAGCAGCCGCTAAGGAGTTTGCTGCCAAAAC
TTGTATTCGATTGGTACCGCGAACGAACGAAAGAGACTACGCTCGTATTA
TCGCTGGCGGAGGGTAAGTTTACTGTTTTTTCCTTACATAGAAAAAAAAG
TACTTACTCCAGGATGACTTGGCTTTTCCGTTCCCGGATAAATATTCCTG
GTACATTTCTGAAATCTTTCCGCTGCTTTCCCTGGGTTGCCTACAAACAG
TCTCGGTCTATTTCAGTTGTAAAGGAATATTTAGCCGGGAATAAGGAATT
TTAGCCATCATACAGTAATCAAATTCAAGCTGTGGTAAAGGgcgaaattc
gattttaaaATATATAGTCCGCGGCTAGAAATTGCTTTACGAGAGATTCG
AGCTAATTAATACTTATAATTctctttactttttatttccatTACAGCTG
TTATAGTTATGTCGGGCGTGTTGGCGGTAGTCAAGATCTCTCTCTTGGTC
GCGGATGTGAATACAAGAGCACTGCAATCCATGAGGTAAGTAGTCCTTTT
TCAACAACAATTTGCTCGTTTTTAAACGCTAActctactctgtaccagag
tgtatctcacgtttatcgcttcgtagtacctCTACGGCTTTTTCATAAAT
GATGTCACGACCAGTACCTGTTTTGTTAAATATGATGATGTAATTCTGTG
ACAACTTATTTCCACTTTGTTTGCCAAAATTATGTTATGTGAACTCTCAc
taattttctcaaatctttctataatttgaactatCACTCAGCTCCCATCC
TAATAAAAAACACTTGTACTCTCCAtagttcgaatctctctgttCGAACT
AATTAGACTTCCCGTTTCACTTTGTCTGTAcccagacccagtatctacgg
ctaatttcaaaattcattgccgtagaggtactacgaagcgataacaCTCT
ACTTTGCTAGCGTAGGCGGTCAGAGCATCTCACTAGTATAcataataatt
ttataaatataaatatttttttctagactttgcACACATAtgttatataa
tattttcagccgaagagccaaatgtaaattttggagaTTGAAATACTAGT
ATACcattattattactattattaagCTTTTCCACTGTACCAATATCATA
CAACACTTTTTCAAATCCAGGCCCCGAGCAAGTTTAAAGTTAGCAATGAT
AGAAGGAAACAAAGCCTTGGGACTTCATATGCGACAATGGTCGAAAttct
acagttgactctctctaattcgatcttcaagggacgaaaaattttccttt
aattGTAAAAAGAATCGGATTATGGGGAGTGTTTTGCACGACTTTCTAGC
CGAAGGAACCAATGCTTTTAtctcgaattatagaaagatcaATAATAGAG
GTTAAAATTAGAGAGAGAGATGAGAgtattttattttccttttattttca
gTTCATGCACGCTTTGGGGTTCTTTCACGAGCAATCGAGACCTGATCGTG
ATCAATTCATTAGAATTAATTTCGGAAACGTCCAGTCAGGTGAGATTTAG
CAAATTATAAAGCAGATCACCAATAGAGTTTTTGACCTCATTAGCCAATC
AAATGAAACCTATTCACTGTGAACCAATGGAGTTAAAGGTTTCTTCATAT
AATATCCCCAACCAGACCTTTTCTGCATACTCAGAGCCAATCAAATTAAA
CTTTGTTTATGCGAAATCAACTAAAAACTTGAAAGGgaattttcttagtt
tttagtaTTGAAGGGTGTTTTCAACCTTTTCCGTTTCTCCTAGATACACA
TTGTTTTACAAACACTCTTATTTTCGGGTCAGACTTTGCGTTGCTTGCAT
TCTaactcattttctgaaaaatctgccttaaccacccctgatattatacc
atatctAAATTTATTAGGTCAAGGGCTATCGATTGCCATGGTTAGGTTTT
CTAAAAAGCTTTTCCTCTCAGAGATAGTGGAAAAAAACCGGCTAAATTGA
GGCCTCGAGCTTTAGCAACCTAGTTGCTTGTAAAAGAAATATCTATATAT
ATTAAATTACTATCTTAAGTGTACTTAATTTGGTGGTCGGCTAAAATGTG
ATTTTTCagcgtgtatttaatttggcggatggcagaatttgtataatttt
acgGGGATTTAATTTAGCGGATGGGGACATTTCAGGCACTTGTAAATCAT
AAATTACTTGATTTCTTAATAATTCTTACTTTAAAATGCTACTAATTTTG
GAAAGGAATTTCTATCataaagcttttttctaattttgtggatatttaat
tttgcggatggtaaatttcttaaaattttggcgggTATCTAATTTTGCGA
ATCCACCAAATTTAATCtccgccaaaattaatacacttaagGTGTATTTT
CTATTTCTTAGGAATGGAGAGCCAATTTCGCAAACAAACATCAAGTTCTG
TCACAACTTTCAATCAACCTTATGATTATGTATCTGTGATGCATTATGAG
AAGTAAGTTATAACACTGaactagaattaaaaaaaactggaACGACCTTC
TTCATTTGTTTTGCGGATTTACTTTGTTGTTTATTCGAATTCTTCCAAGA
GATCTCGATTTTTGAAATGACTTGATGATCTCCAAAACCTATAAAGTGTT
GTACAGCTACTCTCGGAGACCTAATAAATGCCTCCTCTAATTCAACGGTG
GTCACACGTTTGTTTATAAAGCTTCGgtggctaaaatattaagaacatgt
taagaacatttgaagacTCTCCGGaatctaaaacacctgatttcttagga
aaattgataaaaatacagaattgagaatatttcaacctctgaagaccaat
aataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcactgactctttt
taaaaagcattgatgatatttttcagttgtgttttcaacgacgggaataa
aaatatcaactttgaacttcatccaaaatcttggatggtcgtcacggtta
cttttctctgcgttgattgcgcgctgaatagaatctggattggtagGCAC
AGCGTCGAATTATGATTTCCACCTGTGCTTTTAACGGTAATCACTCCCAT
AAAAGGCGATGAGTTTGGACCTGAttcatcatatttttcaaaacaaattt
ttcataacccaaaacaaaattctttcatctctgtcgattttctgattttg
taTAATTTCCCAACCACTATACCTATTAAGTCCATTGTGGGGGAGGGAGC
GTACGAGGCTCCTGAACACCgacaatttttcacaaaattacaACAATACc
gacacatatttttttcatgtttttattcttCAAAATTCTAATATGAGATA
AGAGGATAAGAGGGATTTCTGAGAATTTAGCACCGTTTCTCCATCGTTTT
AAGCAAAATTACCGTATCACCGATTGAATGTTATTTAATTAACATTTTCC
GTCATCTAAAAGCATCtcaaacaccgaaataccgacaaattTTTTGTTGA
TCACCGAAAAACCGACGCAAAAAAAGGTCAACCGACACACCGACAAACTG
GTACGCCCCCTCCATTGAGTACCTGTGACTACATGATATGTTTTCAACCA
GCATTCAACTGACTATTTTTACATTTATTATCAAATCAGAAAACTGGGAA
TTACATTTTCATCATTTAGTTTCTTACACTTTCTTTCAGATATGCATTTT
CTAAAAGTTATGGTCGCTTAGCAACAATCGTTCCAAAGAATAATCCAAAT
CAAAAATTAGGTCAAGATGTAAATGGTGGGTTATCGAGCATCGATGCCAA
ACAACTCAACGCTATGTACTGTGGAGGTATGTACAGTATGTTTATTTTAA
CCGGGTTAATTTTTcttgagtttttgatttttgcctTTTTCGCCAAAAAA
AACTTGCGATATTGCATGAGATTGTTGATACGCGAAATTGACTAGTGAAT
AAAGTTACCTTTCGGCTCGGCCTAATTTGTGCATATCATATAAAAGGGTT
TCATGTTTTGTGAGGATGAACTAAAGAACTCAACCATTACTTTTTTACAA
TATCATATTTGCCGAcgaatattaaaaacaaaaattgtttcatcataCAT
CcttaaatacacccctgtctcacagccccggtggaacttttttgcCTCAG
AGGGGGATAAAAAATCCTAtggaaatctcaatggggatagaaattctatt
gttccaggttaaaaaatctagttaggatggtttttgagtgcaattttaga
acattgaatttcgaatggggttgaaatcaaagttaatttcccTGAAATTT
CAGTGTATTTTCCCAGCGGGGACGaaatctttgccaaattttccagtgag
actggggtcccagcgggtctgtttAAGTTAGAAATAAAGTACAACTTTTC
ATGATAACATAGCTGCATGCGCGGAACTGAAATTTGTTGGGTATCagaaa
attctatttttaagGGGTTTTTTTAATGTAGAGAAGAAAACAAACATGAC
GCCAGATAATACCCTGGTGTAGGCTGATGCAAGTAGAGAATTAGAGAATT
AtagaaaagattcaaataatggaagttcgaataagcaaTAGGTGTGCTGT
Agtaattaaatccagaaaatttcgcgatttttttcgctcgcgaaatttaa
tctcgcaaaATTTAAGCAATAGGTGTACtgtagttaattttttttctgta
tgGAACGATAAACTAAAGTACACTGTCTTTATCTTCTTATGTTGTCTGGC
AACTTTTTCTTCATCCTTTTTCTTCATCCTTTTTCTAGGTGGCCCTGGAA
AACCCACAACCACCAAAAAACCAACCACTGGTGGCGGTGTAACCGCAGCA
AGATGTAAAAAACGAATGAATAATTGCTCCCGATTCATGAGAGAATGTGC
TGCACTTatgtaaaagatttttctttacgTTATGTAATTTGAACTTCTGC
AGTTAGTTAATGTAGTTAAATAGCTTTCGTAATATTGTANctttaataat
tggtcaatggtacgcgttctttagaaaaagtaacaaaattgttttattac
aggttaacgaccaaccaaatcaaaaaagagcttgtaaaaactccagcttg
tcccccaaatttggccctgttttacttgattttgtcctccagcgaattaa
tttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031858XLOC_031858Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050318-exon-scaffold_169-1491911889:364982..365175TCONS_00050318-exon-scaffold_169-1491911889:364982..365175Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:364982..365175TCONS_00050318-exon-scaffold_169-1510915933:364982..365175Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:364982..365175TCONS_00050318-exon-scaffold_169-1575043694:364982..365175Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:370024..370237TCONS_00050318-exon-scaffold_169-1491911889:370024..370237Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:370024..370237TCONS_00050318-exon-scaffold_169-1510915933:370024..370237Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:370024..370237TCONS_00050318-exon-scaffold_169-1575043694:370024..370237Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:370621..370779TCONS_00050318-exon-scaffold_169-1491911889:370621..370779Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:370621..370779TCONS_00050318-exon-scaffold_169-1510915933:370621..370779Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:370621..370779TCONS_00050318-exon-scaffold_169-1575043694:370621..370779Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:371477..371594TCONS_00050318-exon-scaffold_169-1491911889:371477..371594Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:371477..371594TCONS_00050318-exon-scaffold_169-1510915933:371477..371594Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:371477..371594TCONS_00050318-exon-scaffold_169-1575043694:371477..371594Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:371929..372016TCONS_00050318-exon-scaffold_169-1491911889:371929..372016Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:371929..372016TCONS_00050318-exon-scaffold_169-1510915933:371929..372016Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:371929..372016TCONS_00050318-exon-scaffold_169-1575043694:371929..372016Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:372933..373020TCONS_00050318-exon-scaffold_169-1491911889:372933..373020Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:372933..373020TCONS_00050318-exon-scaffold_169-1510915933:372933..373020Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:372933..373020TCONS_00050318-exon-scaffold_169-1575043694:372933..373020Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:373893..373983TCONS_00050318-exon-scaffold_169-1491911889:373893..373983Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:373893..373983TCONS_00050318-exon-scaffold_169-1510915933:373893..373983Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:373893..373983TCONS_00050318-exon-scaffold_169-1575043694:373893..373983Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:375521..375657TCONS_00050318-exon-scaffold_169-1491911889:375521..375657Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:375521..375657TCONS_00050318-exon-scaffold_169-1510915933:375521..375657Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:375521..375657TCONS_00050318-exon-scaffold_169-1575043694:375521..375657Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1491911889:376620..376986TCONS_00050318-exon-scaffold_169-1491911889:376620..376986Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1510915933:376620..376986TCONS_00050318-exon-scaffold_169-1510915933:376620..376986Clytia hemisphaericaexon
TCONS_00050318-exon-scaffold_169-1575043694:376620..376986TCONS_00050318-exon-scaffold_169-1575043694:376620..376986Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:364982..376986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
240.472	245.177	190.96	187.448	4.81648	1.52242	0.612245	0.573176	1.25191	0.222814	3.45978	1.73047	0	0	0.0161845	0	5.67466	6.98503	0	0.0476695	20.4376	19.3134	103.323	83.1601	33.4893	36.2768	11.8385	12.0954	37.7606	38.8505
Blast
[Close]
BLAST of TCONS_00050318 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 1.424e-32
Identity = 86/229 (37.55%), Postives = 120/229 (52.40%), Query Frame = 3 
Query:  429 NGDILFRPGEEEKFFEEGSDILKRDAIRNENA---RWPKA-----RVPYVISSXXXXXXXXXXXXXXXXXXK-TCIRLVPRTNERDYARIIAGGGCYSYVGRVGGSQDLSLGRGCEYKSTAI--HEFMHALGFFHEQSRPDRDQFIRINFGNVQSGMESQFRKQTSSSVTTFNQPYDYVSVMHYEKYAFSKSYGRLATIVPKNNPNQKLGQDVNGGLSSIDAKQLNAMY 1082
            N  ++     E  F  EG DI++    R  +A   +WP        VP+++SS   +    +   A     + TCIR V   ++RD+  II   GC+S VGR GG Q +SL   C  K   I  HE MH LGF+HE +R DRD++IR+N+  +  G E  F K  SS++ T   PYDY SVMHY + AFS+    L TI P   P+  +GQ  N  LS+ D  ++  +Y
Sbjct:   59 NQGLILEETPESSFLIEG-DIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLT---PYDYSSVMHYGRLAFSRR--GLPTITPLWAPSVHIGQRWN--LSASDITRVLKLY 279
The following BLAST results are available for this feature:
BLAST of TCONS_00050318 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL1.424e-3237.55Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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