TCONS_00049511 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049511
Unique NameTCONS_00049511
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1688

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049511 ID=TCONS_00049511|Name=TCONS_00049511|organism=Clytia hemisphaerica|type=transcript|length=1688bp
TGAAAAGCAGAATAATTATTAAAATGACACAGTACTTACCAGCAAATCTT
CTTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGA
TGGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGTTGACAGATT
TCCTTAGAAACTTTGAGACCACTGCACCTCCACCTCCCACAAAAGGTGAA
AGAAGAGAACAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAGATTATGC
TGATTCCAAACTAGAAGAAAAAGTAGCAACCTGGGATCCACACAGTGACA
CCAATGCTGTTGGCGATCCATTCAAGACTCTATTTGTTGGAAGAATTaaa
tatgaaaCATCTGAAAACAAGCTGAGAAGAGAAATGGAAGCTTATGGTCC
TGTCAGGAATATTGCAATAGTGTTTAACCACAATTCGAGAAAGCCCAGAG
GATATGCATTTGTGGAATTCGAACACGAGAGGGACATGCACAGTGCTTAC
AAACATGCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCGATGT
TGAAAGAGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGGTGGAG
GACTTGGTGGCACTAGACGTGGAGGACCGGAAGATAATATTCGCCACTCA
GGACGTGTTGATCAATGGGAAGGTAAAGAGCGTGAACGCGGAGGCGGAGA
AGATCGTGACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGG
GTGATAGAGATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCA
AGAGACCGAAAAGACAGAGACAGagacCGCGAAAGACGACGAGACCGTGA
CCGAGGCGATCGAGACAAAGACCGAGAACGAAGTGATCGTGGAGACCGTG
ACAAAGATCGAGACAGAGAAAGAAGTGATCGTGACCGAGATAGGGGTGAC
CGTGAAAAACGTGATCGCGGTGAGAGTCGCGACCGCCGAAGAGATCGCGA
TGAGAGACGAGAAGAAGAATATGTCGGAGATGCACCACCTTCAGGTAATG
GTGAGAAGAACCATTACGATAACGAGTTTCCGTACCGATCGGCAGAAGAT
GGGGAAATTAAACAGGAGGAAGTTGAACAGAATAATTACCACGTGGCCGA
TCAACGAGCTGAAGAAGGCGATGATGATTATTATCAGTAAAAATCTAACG
GCGAACATTGTTATTGCTGTGTACGCAGTTATCATTCTTCCTTGGTAGTA
AAGACGAACATTGCGGAATGTTTTGATAGGGAAATGAATTTTAATCGGAA
AGTCGAACAGTTCAGTGAATGTTATGAATGCTTTGTCTCAAATTGGGAAT
TGAGGATAAAGGACGAGTCAGATGTCAAATTTGCATTTTGCTACTTTCAC
GGATTACTGAAAGCTTACCTTGACGATTTCAGGGCTAAAAATCAAACTAT
GTAATTTTAGAATGTTCCAGTCTAAGATGCACGATCTCAGTGTAAACAGG
TATTATTTGCCTTCCCTTCGTCATACTTTgtaaattttattattattctg
ACAACATGACCAAATTtgtaatgttttaattttttgaaatatcgaGACTT
TTATTATTTTATCCACCTTCTTTCAAATTCTTTTATCTTCGTATTTGAGT
TTCAAATAACATGGTGTTGTTGACAGTTTTCTCTCTTG
Run BLAST on NCBI

protein sequence of TCONS_00049511-protein

>TCONS_00049511-protein ID=TCONS_00049511-protein|Name=TCONS_00049511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
KSRIIIKMTQYLPANLLALFTARPPIPFKPPPDGLKKRKNETPIIGLTDF
LRNFETTAPPPPTKGERREQREERKRQEKKDYADSKLEEKVATWDPHSDT
NAVGDPFKTLFVGRIKYETSENKLRREMEAYGPVRNIAIVFNHNSRKPRG
YAFVEFEHERDMHSAYKHADGKKIDGRRIVVDVERGRTVKSWRPRRLGGG
LGGTRRGGPEDNIRHSGRVDQWEGKERERGGGEDRDRDRERDRSEKRERG
DRDRDREERRKRSRSPRDRKDRDRDRERRRDRDRGDRDKDRERSDRGDRD
KDRDRERSDRDRDRGDREKRDRGESRDRRRDRDERREEEYVGDAPPSGNG
EKNHYDNEFPYRSAEDGEIKQEEVEQNNYHVADQRAEEGDDDYYQ
Run BLAST on NCBI

transcript from alignment at scaffold_16:307518..314735-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049511 ID=TCONS_00049511|Name=TCONS_00049511|organism=Clytia hemisphaerica|type=transcript|length=7218bp|location=Sequence derived from alignment at scaffold_16:307518..314735- (Clytia hemisphaerica)
TGAAAAGCAGAATAATTATTAAAATGACACAGTACTTACCAGCAAATCTT
CTTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGA
TGGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGTTGACAGATT
TCCTTAGAAACTTTGAGGTAAGAATTTACACTTTTTATGCCTTTATATAA
TATTCAGATTCATTTTTGTTATTTAAGTCTACATTTAAATTTCAATGCAT
AACTGATTGTTTAATTTTCATTTTGAACTAAATAGTCATTCTTTTTATTT
TAGAGAATGACTTAATATAATATAAAAAATATCCTTTTTCAGACCACTGC
ACCTCCACCTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAGAACGAA
AACGTCAAGAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAAAAAGTA
GCAACCTGTAAGCAAAATCATAACTTTCTTTGGTTTAAAGAAGTATATCT
TTAGTACAATAGTCTGTTCCTACTTGAATGGGACTTATAGTTATGTGATG
TGATGGTAGCCATTGAAAAAGCAAGAATCTGTCTACATTACAAATTGCAT
ATTCACAGCCTTACCATTATGTGATGAATACTGCCATTTATATTTTTCAG
GGGATCCACACAGTGACACCAATGCTGTTGGCGATCCATTCAAGACTCTA
TTTGTTGGAAGAATTGTAAGTCCCTTTCTACATTGTTTATAGTTCTATCA
GAATTCATCAAACTATTCTTAGAGTTTTCAGTTGCTGTCTAATTGCTTGT
TTCATTTCTAGATAAAATTTGTAAAACTACATTATGTCAAGTTGTTGATA
AACAAAGCCTTGTGTACAAAGCCTTATTGAATTTAGTTTGCTTTTTTTAG
AAATATGAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAAGCTTATGG
TCCTGTCAGGAATGTATGTTTTTGTACATTCTTATTTGGGAAATCACTTT
TTAGAATATACACTGTCACGTTTTAAGATTGCTCAATTCCTTAAAACTCT
AACCCTTTCTAGGCCACCTGGAAAGACAGGCAAAAATAGTTTTCAATGGC
AATGCACAGTTGAATTTAATTGGAAAAGACAAAAGTTTTTAAGCAGCCTG
TGGCATTTATATTTATCATTGCTAGTTGTTAGTCACAATGTCGAATCTAC
CCATGGGCCTGTCAATAAACACCCACAATGACAAATTTACTGGACATGGA
CATGGGAAGGCTTTACGTTATCGAAACTGAGTTTATAAATCTTGAAGTGT
CACTTGGAATTGAAATTACATTTTCTACCCTTTCCAATTTCAGATTGCAA
TAGTGTTTAACCACAATTCGAGAAAGCCCAGAGGATATGCATTTGTGGAA
TTCGAACACGAGAGGGACATGCACAGTAAGTCTGAATATTAAATTATGTC
TAAGAATATAACATACTTTTAAATGGAATGAGATATTTAGAAGATTTGTC
CATTCAAACAAAGTTCAAAGACTAAATTAAATATTTTTTTATTTATTTGT
CAGAGCTTTGTGGACAAATCGAAAGGAAAACTTGGCATTAAAATCTATGG
TGGGTATTGGTGGGTATAAAACAACCTCCAATCCAGCCAATTTTAAAACT
ATAACACTTCAAAATTAAAGCATACTTTTGAATAGCTTACTTCTAATAAA
ACATCTTCTATAATCCGTCGACTATCATCTGGGCAATTTAATAAAATACC
TTTGCTTTCTACTATGATATTGATAATGGTGACATTCAACAAGTTATTGC
CCAGATAATTTTAAATCGACCATTATCTTCCTATTTTTCTTTCTTCTCAA
TCTGTCTCTTGCTTTGATATTACTTTTTGTGGAAAATAAAAAATTGTTCA
TCAAAAGTACTGTGGTTGAAGTGGTTAGTTAGTTCGGTAAGTTTAAAAAG
CTTTGGTTAATGCTGGTTTGAAGGTAATATGGAATATGTGGTAAGCTTGG
TAAGTTTCAGTAGTTGTAATCTTCTTAGAATGCTACCACCCTTTTCCCGA
ATGATCATTGCAAGAGTTGTGTTGGTAAGTCTGGTAAGTTTAGCACTCAT
TGTTGAGATTGGATTATTCTGTAAATGGGAACTTTATGTAATTGTGGAAA
ATTCATACATAGTCAACTATTGTGGTGAGTTAAAAAGGTATAATACAAAA
CATAATAAGTATGGTAAGTTATGGTTTAAATGTGATCATGATGGATTTCC
TCTGGTTTACGATTACGATCTATATGGTCAAATAGTATGTTAAAAGGTAT
AGTATAAAATTTGGTATCAGTAAGTTTTCATTCGTTCAACCAGGTAAGGT
TTGGCTGTAATTTTTCTCCTTAATAAAAGTTANATATTTAGTACCAGATA
CTACTTCATTTTTGCTGTAAAAAATAGAGACACCACCCCCTAAAATCTTA
AATTTTACAGATTAGACCAAAAGAGAGGGTTCGATGTTAGTTTTTCTGAC
TGAAATGGACAGATAATTCAAACAAACTATCATTGATTAAGTCAGAGGCT
TTTAAGTCCTTTGATTTTAATAACACACTTCTTGACCATTTCAGAAGTTT
TGTCTTCACAAAAATCAAAAAATTTCTCAAAAGAGTAAAAAAAAGTTTCT
CAATTAAAAAAAATTTCAAATAAAAAAAACAATATTTGAAAAAAGTCAAA
ATATTACAAAAGACTACTTTTTTTATTGAAAAAGGAGCAAAACTCTGTGA
AAAAGTACCCAAATAGTACCCTGTACATGCTAGAAGAGTGAAAAATACAC
ACCCCCACCCCTAAAGTAGTACCGGGTACTAACTTTTTTGAAATGCAAAA
ATAGACACCACCACCCGGCTATGGGTTAGTACCCTGCCTTTGTACCCTGC
CTTTGTACCCCCCCCCCTGAGTCAACTATTGTGGTGAGTTAAAAAGGTAT
AATACAAAACATAATAAGTATGGTAAGTTATGGTTTAAATGTGATCATTA
TGGATTTCCTCTGGTTTACGATTACGATCTATATGGTCAAATAGTATGTT
AAAAGGTATAGTATAAAATTTGGTATCAGTAAGTTTTCATTCGTTCAACC
AGGTAAGGTTTGGCTGTAATTTTTCTCCTTAATAAAAGTTATGAAGACCA
AGGTAAGGTTCTTGCATATTGTTCGGTATCGGTAAGTTTGTGATTAAATG
AAGATGCAGTAATTGTGGTAAACTTTGTAAGTGGTTTGGAAAATTTGAGT
CTATTTGTTCAGGTAAGGCTTCCAATTTGATTGGTAAGTGAATGAAGTTG
ACAATCGAACGTCTGATTTCTGATTAATCAAACGAATGGATTTAATAGTA
AGTTATTTGTGTTGTCCTCTGGCTAGGTGAGTTCTTTGTTCTTTAGTCTT
TAAAACCTTGGTGAGTAATTGCTTATGCACCTCTCTTTCAAATTGACCTT
GGTAAGTGCTCTGACATGGTAGATTCTTTGTAAGTTGGTCTCGGTAAGTT
TTGATGTTAGTGTTGGTGTGATTAATTTTGGTAAGTTTTGCCCTCTCCGG
GTGCTGATGGTGGTACGCTAGAAGTTTGATGTCTTGATCAAATGTGAGCC
GTTGTCTTAATCAAAAATTCGCCAGTGAGTAAATCTTTTCTTCAAACTTC
CCTCGCGAATTCGATAGCTAGTTTTAGCTATACTAATATCAGTTTGTCAT
AGTTTTTGAATAGAAATTATTGATCATCAATTTAATATAAAACCTTTTTT
GGTAAGTAATATTTCTTTGAAAGAAACAGTTGAAAGCACAGATTATTATG
AAATGAATATGGTACCATAGAACCAGACAGATAGTTTTATATCTGGCACA
ATTCTTTCTGACTCCTTTTCCCATTTTCTTCTGCAGGTGCTTACAAACAT
GCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCGATGTTGAAAG
AGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGGTAAGTAGAACT
ACATTCAAAATCAATCTTGAAATGGATGTTTCAATTGTCTGAAATGCTTC
AATAATAGAATGAAAATACGAAAGTAGGATACAAATGTTTTGAGATGTTT
TAGAGTCAAAAAAACTTTCAGCTAATTATCAATATTGATTTTCTCTTCTT
ATTTTGACAGCATGGTTTCCCCTTATCCATTTCTCCCCCCTCAATTTGGA
ATTTGATTTGTACTGTGCCCTTATTTCCTAATCCCCCCTTAAATCTTCTT
TTTCTTTTCTAAAGTGCCCCTTATTAAAGAAGCTGACACACTTTGTAATA
ACACCTGATGCACTTTATAGTAAAGGGAAATTCCATCCAAAACAAAAATT
TTTCTAAGATTTCAAAACCGTTAAGACAAGAAATATAACAGGATGTAAAG
GTTTTAGTTATAAAAATGTATGTGAAGCTGTCTGACATGCCTGGGAAATC
AGTTAGAGGAGACATTCAAATATTTTCTCTTTTGGGCAATGGGTTTTTAA
TTTTCCTTTTAATTATGAAACAATGACTATTTTTCTTTTCATAGCCGATT
AATACAATATTTAAAAATTTGGTTGGTTAAAAAAGTCATTGATTATTTTT
TCAGCCAGAAAGGTTTTCATTTGTTTCTATCAGGGAAATTATCAATATTA
TTCTCTATGATAAATGTTTAATCGACCCATGACTAAGACAACTGAAGACA
GTAAGGTCATTCATTATCTTGCATTTTTAGTATTTAGGACTGAACCCAGT
TTATTTTATTTATTTTTAAGTCTGAAACTTTGGATCTAAATCTTAAAATT
TCTGTTTTAAATGTAGTGAAGCAATTTACAGGGCTTTTTACGAAGCCCTT
TTTATGGCACTTAAATCTATATTTTATTACAAAGTGCGTCAGCTTTTGGT
ATTACAAAGTGCGTCAGCTTTTGGTATTACAAAGTGCGTCAGCTTTTGGT
ATTACAAAGTGCAGCAGGTATTGCAACTGTGGCATTTATTACAAAGTGTT
TTTATTACAGGGGCCAAAAATCACCCAACATTGCTGGGCGACAGAGAAAA
TCTTTGAATTTTTACCCTTAGTTTACCACCTTAAACGGTATATTAAGTAT
ATTTAAGTAAAAAAAAACTTTGCAAGAGTATGAAAAGAGATTTGGATTCA
CATGAATTACCCCCCCCCCTTAAATTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCCCCCCCCCCTAAATTCAAAATTACTTTTTCTTTGATCCCCTTAA
AAATGAATACCCCCTCATTTCTGAAAATTTCAAAAAATTTGCCCTTAAGA
TTTTGCCCAAAATTCAAGTCCCTCCTTATTTTAAGGGGGGGCTGGAACCA
TTGTGACATTTGACGTTTGTTACGAATTTTGCAAGTTACAATAATTAAGA
AATTGTGGTTAAATTAATTTTCCAGGTGGAGGACTTGGTGGCACTAGACG
TGGAGGACCGGAAGATAATATTCGCCACTCAGGACGTGTTGATCAATGGG
AAGGGTAAGTTGTTTTCCATTCAAATTTAAAAATACATATGAAAAAGTGG
AAATATTACACAAAGAATACACGCTTTTTCTTTTATAAGAATAGTGTACT
TTGGTTGAGGATGAGCATTTTTCTTATTTTTCTATTGTTCTAAACAATAG
GCCTATTGTCTTAAACCCGAAATCTCACCCTGATATTCTTATAGAAGTTA
TTCTTATAAAAGAAAATGCGTGTATAACTTAAGTCTCAAAAGTATAGTAT
GTGGTAAAAAAGGACTTTAAAGCACCCCTTTATGTTGGATTAAAAGTTAA
AAAGTATCCACAAACTTTTGAAACAGACTTAAGGTAGATCATTCAAATTG
GGAAATTGTCGACCAAGAAGTTATTTTATTTGATTTAATACGCTACTTTT
CTTATTTTATAACAGTAAAGAGCGTGAACGCGGAGGCGGAGAAGATCGTG
ACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGATAGA
GATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAGACCG
AAAAGACAGAGACAGGTAAAAGAAATCTGTATTCTCTATGCTCCACTTTT
CGCGTAGATTTTTTAAAAAAGTTTTAAAAGCAATATCCAATAGGCCGAAA
CAGAGTCTCGTTTTATTTTTTGGTACTGTTATGCTTACTTATTACTTTTC
CTCCTTGAATGAATTTTTTCTTTTTGTCCGATAAAAGGAAATATCAGTAA
CGTAGTCAGTCACCCAATGAATAAATTTTGATATCTTCATTTAAAATTTT
CAGAGACCGCGAAAGACGACGAGACCGTGACCGAGGCGATCGAGACAAAG
ACCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGATCGAGACAGAGAA
AGAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCGG
TGAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAAT
ATGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGAACCATTACGAT
AACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGGA
AGTTGAACAGAATAATTACCACGTGGCCGATCAACGAGCTGAAGAAGGCG
ATGATGATTATTATCAGTAAAAATCTAACGGCGAACATTGTTATTGCTGT
GTACGCAGTTATCATTCTTCCTTGGTAGTAAAGACGAACATTGCGGAATG
TTTTGATAGGGAAATGAATTTTAATCGGAAAGTCGAACAGTTCAGTGAAT
GTTATGAATGCTTTGTCTCAAATTGGGAATTGAGGATAAAGGACGAGTCA
GATGTCAAATTTGCATTTTGCTACTTTCACGGATTACTGAAAGCTTACCT
TGACGATTTCAGGGCTAAAAATCAAACTATGTAATTTTAGAATGTTCCAG
TCTAAGATGCACGATCTCAGTGTAAACAGGTATTATTTGCCTTCCCTTCG
TCATACTTTGTAAATTTTATTATTATTCTGACAACATGACCAAATTTGTA
ATGTTTTAATTTTTTGAAATATCGAGACTTTTATTATTTTATCCACCTTC
TTTCAAATTCTTTTATCTTCGTATTTGAGTTTCAAATAACATGGTGTTGT
TGACAGTTTTCTCTCTTG

Coding sequence (CDS) from alignment at scaffold_16:307518..314735-

>TCONS_00049511 ID=TCONS_00049511|Name=TCONS_00049511|organism=Clytia hemisphaerica|type=CDS|length=10692bp|location=Sequence derived from alignment at scaffold_16:307518..314735- (Clytia hemisphaerica)
AGACCGCGAAAGACGACGAGACCGTGACCGAGGCGATCGAGACAAAGACC
GAGAACGAAGTGATCGTGGAGACCGTGACAAAGATCGAGACAGAGAAAGA
AGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCGGTGA
GAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAATATG
TCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGAACCATTACGATAAC
GAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGGAAGT
TGAACAGAATAATTACCACGTGGCCGATCAACGAGCTGAAGAAGGCGATG
ATGATTATTATCAGTAATAAAGAGCGTGAACGCGGAGGCGGAGAAGATCG
TGACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGATA
GAGATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAGAC
CGAAAAGACAGAGACAGGTGGAGGACTTGGTGGCACTAGACGTGGAGGAC
CGGAAGATAATATTCGCCACTCAGGACGTGTTGATCAATGGGAAGGGTGC
TTACAAACATGCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCG
ATGTTGAAAGAGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGAT
TGCAATAGTGTTTAACCACAATTCGAGAAAGCCCAGAGGATATGCATTTG
TGGAATTCGAACACGAGAGGGACATGCACAAAATATGAAACATCTGAAAA
CAAGCTGAGAAGAGAAATGGAAGCTTATGGTCCTGTCAGGAATGGGATCC
ACACAGTGACACCAATGCTGTTGGCGATCCATTCAAGACTCTATTTGTTG
GAAGAATTACCACTGCACCTCCACCTCCCACAAAAGGTGAAAGAAGAGAA
CAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAGATTATGCTGATTCCAA
ACTAGAAGAAAAAGTAGCAACCTAAAAGCAGAATAATTATTAAAATGACA
CAGTACTTACCAGCAAATCTTCTTGCCCTCTTCACTGCAAGACCACCAAT
TCCATTCAAGCCTCCGCCAGATGGTCTTAAGAAGAGGAAAAATGAAACAC
CAATTATTGGGTTGACAGATTTCCTTAGAAACTTTGAGAGACCGCGAAAG
ACGACGAGACCGTGACCGAGGCGATCGAGACAAAGACCGAGAACGAAGTG
ATCGTGGAGACCGTGACAAAGATCGAGACAGAGAAAGAAGTGATCGTGAC
CGAGATAGGGGTGACCGTGAAAAACGTGATCGCGGTGAGAGTCGCGACCG
CCGAAGAGATCGCGATGAGAGACGAGAAGAAGAATATGTCGGAGATGCAC
CACCTTCAGGTAATGGTGAGAAGAACCATTACGATAACGAGTTTCCGTAC
CGATCGGCAGAAGATGGGGAAATTAAACAGGAGGAAGTTGAACAGAATAA
TTACCACGTGGCCGATCAACGAGCTGAAGAAGGCGATGATGATTATTATC
AGTAATAAAGAGCGTGAACGCGGAGGCGGAGAAGATCGTGACCGTGATAG
AGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGATAGAGATCGTGACA
GAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAGACCGAAAAGACAGA
GACAGGTGGAGGACTTGGTGGCACTAGACGTGGAGGACCGGAAGATAATA
TTCGCCACTCAGGACGTGTTGATCAATGGGAAGGGTGCTTACAAACATGC
TGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCGATGTTGAAAGAG
GTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGATTGCAATAGTGTT
TAACCACAATTCGAGAAAGCCCAGAGGATATGCATTTGTGGAATTCGAAC
ACGAGAGGGACATGCACAAAATATGAAACATCTGAAAACAAGCTGAGAAG
AGAAATGGAAGCTTATGGTCCTGTCAGGAATGGGATCCACACAGTGACAC
CAATGCTGTTGGCGATCCATTCAAGACTCTATTTGTTGGAAGAATTACCA
CTGCACCTCCACCTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAGAA
CGAAAACGTCAAGAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAAAA
AGTAGCAACCTAAAAGCAGAATAATTATTAAAATGACACAGTACTTACCA
GCAAATCTTCTTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCC
TCCGCCAGATGGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGT
TGACAGATTTCCTTAGAAACTTTGAGAGACCGCGAAAGACGACGAGACCG
TGACCGAGGCGATCGAGACAAAGACCGAGAACGAAGTGATCGTGGAGACC
GTGACAAAGATCGAGACAGAGAAAGAAGTGATCGTGACCGAGATAGGGGT
GACCGTGAAAAACGTGATCGCGGTGAGAGTCGCGACCGCCGAAGAGATCG
CGATGAGAGACGAGAAGAAGAATATGTCGGAGATGCACCACCTTCAGGTA
ATGGTGAGAAGAACCATTACGATAACGAGTTTCCGTACCGATCGGCAGAA
GATGGGGAAATTAAACAGGAGGAAGTTGAACAGAATAATTACCACGTGGC
CGATCAACGAGCTGAAGAAGGCGATGATGATTATTATCAGTAATAAAGAG
CGTGAACGCGGAGGCGGAGAAGATCGTGACCGTGATAGAGAACGCGACCG
TTCAGAAAAACGTGAACGGGGTGATAGAGATCGTGACAGAGAAGAAAGAC
GAAAAAGAAGTCGCTCACCAAGAGACCGAAAAGACAGAGACAGGTGGAGG
ACTTGGTGGCACTAGACGTGGAGGACCGGAAGATAATATTCGCCACTCAG
GACGTGTTGATCAATGGGAAGGGTGCTTACAAACATGCTGATGGTAAAAA
GATTGATGGAAGACGTATTGTTGTCGATGTTGAAAGAGGTCGTACCGTCA
AAAGTTGGAGACCTCGTCGCCTAGATTGCAATAGTGTTTAACCACAATTC
GAGAAAGCCCAGAGGATATGCATTTGTGGAATTCGAACACGAGAGGGACA
TGCACAAAATATGAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAAGC
TTATGGTCCTGTCAGGAATGGGATCCACACAGTGACACCAATGCTGTTGG
CGATCCATTCAAGACTCTATTTGTTGGAAGAATTACCACTGCACCTCCAC
CTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAGAACGAAAACGTCAA
GAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAAAAAGTAGCAACCTA
AAAGCAGAATAATTATTAAAATGACACAGTACTTACCAGCAAATCTTCTT
GCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGATGG
TCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGTTGACAGATTTCC
TTAGAAACTTTGAGAGACCGCGAAAGACGACGAGACCGTGACCGAGGCGA
TCGAGACAAAGACCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGATC
GAGACAGAGAAAGAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAA
CGTGATCGCGGTGAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACG
AGAAGAAGAATATGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGA
ACCATTACGATAACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATT
AAACAGGAGGAAGTTGAACAGAATAATTACCACGTGGCCGATCAACGAGC
TGAAGAAGGCGATGATGATTATTATCAGTAATAAAGAGCGTGAACGCGGA
GGCGGAGAAGATCGTGACCGTGATAGAGAACGCGACCGTTCAGAAAAACG
TGAACGGGGTGATAGAGATCGTGACAGAGAAGAAAGACGAAAAAGAAGTC
GCTCACCAAGAGACCGAAAAGACAGAGACAGGTGGAGGACTTGGTGGCAC
TAGACGTGGAGGACCGGAAGATAATATTCGCCACTCAGGACGTGTTGATC
AATGGGAAGGGTGCTTACAAACATGCTGATGGTAAAAAGATTGATGGAAG
ACGTATTGTTGTCGATGTTGAAAGAGGTCGTACCGTCAAAAGTTGGAGAC
CTCGTCGCCTAGATTGCAATAGTGTTTAACCACAATTCGAGAAAGCCCAG
AGGATATGCATTTGTGGAATTCGAACACGAGAGGGACATGCACAAAATAT
GAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAAGCTTATGGTCCTGT
CAGGAATGGGATCCACACAGTGACACCAATGCTGTTGGCGATCCATTCAA
GACTCTATTTGTTGGAAGAATTACCACTGCACCTCCACCTCCCACAAAAG
GTGAAAGAAGAGAACAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAGAT
TATGCTGATTCCAAACTAGAAGAAAAAGTAGCAACCTAAAAGCAGAATAA
TTATTAAAATGACACAGTACTTACCAGCAAATCTTCTTGCCCTCTTCACT
GCAAGACCACCAATTCCATTCAAGCCTCCGCCAGATGGTCTTAAGAAGAG
GAAAAATGAAACACCAATTATTGGGTTGACAGATTTCCTTAGAAACTTTG
AGAGACCGCGAAAGACGACGAGACCGTGACCGAGGCGATCGAGACAAAGA
CCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGATCGAGACAGAGAAA
GAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCGGT
GAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAATA
TGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGAACCATTACGATA
ACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGGAA
GTTGAACAGAATAATTACCACGTGGCCGATCAACGAGCTGAAGAAGGCGA
TGATGATTATTATCAGTAATAAAGAGCGTGAACGCGGAGGCGGAGAAGAT
CGTGACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGA
TAGAGATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAG
ACCGAAAAGACAGAGACAGGTGGAGGACTTGGTGGCACTAGACGTGGAGG
ACCGGAAGATAATATTCGCCACTCAGGACGTGTTGATCAATGGGAAGGGT
GCTTACAAACATGCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGT
CGATGTTGAAAGAGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAG
ATTGCAATAGTGTTTAACCACAATTCGAGAAAGCCCAGAGGATATGCATT
TGTGGAATTCGAACACGAGAGGGACATGCACAAAATATGAAACATCTGAA
AACAAGCTGAGAAGAGAAATGGAAGCTTATGGTCCTGTCAGGAATGGGAT
CCACACAGTGACACCAATGCTGTTGGCGATCCATTCAAGACTCTATTTGT
TGGAAGAATTACCACTGCACCTCCACCTCCCACAAAAGGTGAAAGAAGAG
AACAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAGATTATGCTGATTCC
AAACTAGAAGAAAAAGTAGCAACCTAAAAGCAGAATAATTATTAAAATGA
CACAGTACTTACCAGCAAATCTTCTTGCCCTCTTCACTGCAAGACCACCA
ATTCCATTCAAGCCTCCGCCAGATGGTCTTAAGAAGAGGAAAAATGAAAC
ACCAATTATTGGGTTGACAGATTTCCTTAGAAACTTTGAGAGACCGCGAA
AGACGACGAGACCGTGACCGAGGCGATCGAGACAAAGACCGAGAACGAAG
TGATCGTGGAGACCGTGACAAAGATCGAGACAGAGAAAGAAGTGATCGTG
ACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCGGTGAGAGTCGCGAC
CGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAATATGTCGGAGATGC
ACCACCTTCAGGTAATGGTGAGAAGAACCATTACGATAACGAGTTTCCGT
ACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGGAAGTTGAACAGAAT
AATTACCACGTGGCCGATCAACGAGCTGAAGAAGGCGATGATGATTATTA
TCAGTAATAAAGAGCGTGAACGCGGAGGCGGAGAAGATCGTGACCGTGAT
AGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGATAGAGATCGTGA
CAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAGACCGAAAAGACA
GAGACAGGTGGAGGACTTGGTGGCACTAGACGTGGAGGACCGGAAGATAA
TATTCGCCACTCAGGACGTGTTGATCAATGGGAAGGGTGCTTACAAACAT
GCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCGATGTTGAAAG
AGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGATTGCAATAGTG
TTTAACCACAATTCGAGAAAGCCCAGAGGATATGCATTTGTGGAATTCGA
ACACGAGAGGGACATGCACAAAATATGAAACATCTGAAAACAAGCTGAGA
AGAGAAATGGAAGCTTATGGTCCTGTCAGGAATGGGATCCACACAGTGAC
ACCAATGCTGTTGGCGATCCATTCAAGACTCTATTTGTTGGAAGAATTAC
CACTGCACCTCCACCTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAG
AACGAAAACGTCAAGAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAA
AAAGTAGCAACCTAAAAGCAGAATAATTATTAAAATGACACAGTACTTAC
CAGCAAATCTTCTTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAG
CCTCCGCCAGATGGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGG
GTTGACAGATTTCCTTAGAAACTTTGAGAGACCGCGAAAGACGACGAGAC
CGTGACCGAGGCGATCGAGACAAAGACCGAGAACGAAGTGATCGTGGAGA
CCGTGACAAAGATCGAGACAGAGAAAGAAGTGATCGTGACCGAGATAGGG
GTGACCGTGAAAAACGTGATCGCGGTGAGAGTCGCGACCGCCGAAGAGAT
CGCGATGAGAGACGAGAAGAAGAATATGTCGGAGATGCACCACCTTCAGG
TAATGGTGAGAAGAACCATTACGATAACGAGTTTCCGTACCGATCGGCAG
AAGATGGGGAAATTAAACAGGAGGAAGTTGAACAGAATAATTACCACGTG
GCCGATCAACGAGCTGAAGAAGGCGATGATGATTATTATCAGTAATAAAG
AGCGTGAACGCGGAGGCGGAGAAGATCGTGACCGTGATAGAGAACGCGAC
CGTTCAGAAAAACGTGAACGGGGTGATAGAGATCGTGACAGAGAAGAAAG
ACGAAAAAGAAGTCGCTCACCAAGAGACCGAAAAGACAGAGACAGGTGGA
GGACTTGGTGGCACTAGACGTGGAGGACCGGAAGATAATATTCGCCACTC
AGGACGTGTTGATCAATGGGAAGGGTGCTTACAAACATGCTGATGGTAAA
AAGATTGATGGAAGACGTATTGTTGTCGATGTTGAAAGAGGTCGTACCGT
CAAAAGTTGGAGACCTCGTCGCCTAGATTGCAATAGTGTTTAACCACAAT
TCGAGAAAGCCCAGAGGATATGCATTTGTGGAATTCGAACACGAGAGGGA
CATGCACAAAATATGAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAA
GCTTATGGTCCTGTCAGGAATGGGATCCACACAGTGACACCAATGCTGTT
GGCGATCCATTCAAGACTCTATTTGTTGGAAGAATTACCACTGCACCTCC
ACCTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAGAACGAAAACGTC
AAGAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAAAAAGTAGCAACC
TAAAAGCAGAATAATTATTAAAATGACACAGTACTTACCAGCAAATCTTC
TTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGAT
GGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGTTGACAGATTT
CCTTAGAAACTTTGAGAGACCGCGAAAGACGACGAGACCGTGACCGAGGC
GATCGAGACAAAGACCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGA
TCGAGACAGAGAAAGAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAA
AACGTGATCGCGGTGAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGA
CGAGAAGAAGAATATGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAA
GAACCATTACGATAACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAA
TTAAACAGGAGGAAGTTGAACAGAATAATTACCACGTGGCCGATCAACGA
GCTGAAGAAGGCGATGATGATTATTATCAGTAATAAAGAGCGTGAACGCG
GAGGCGGAGAAGATCGTGACCGTGATAGAGAACGCGACCGTTCAGAAAAA
CGTGAACGGGGTGATAGAGATCGTGACAGAGAAGAAAGACGAAAAAGAAG
TCGCTCACCAAGAGACCGAAAAGACAGAGACAGGTGGAGGACTTGGTGGC
ACTAGACGTGGAGGACCGGAAGATAATATTCGCCACTCAGGACGTGTTGA
TCAATGGGAAGGGTGCTTACAAACATGCTGATGGTAAAAAGATTGATGGA
AGACGTATTGTTGTCGATGTTGAAAGAGGTCGTACCGTCAAAAGTTGGAG
ACCTCGTCGCCTAGATTGCAATAGTGTTTAACCACAATTCGAGAAAGCCC
AGAGGATATGCATTTGTGGAATTCGAACACGAGAGGGACATGCACAAAAT
ATGAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAAGCTTATGGTCCT
GTCAGGAATGGGATCCACACAGTGACACCAATGCTGTTGGCGATCCATTC
AAGACTCTATTTGTTGGAAGAATTACCACTGCACCTCCACCTCCCACAAA
AGGTGAAAGAAGAGAACAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAG
ATTATGCTGATTCCAAACTAGAAGAAAAAGTAGCAACCTAAAAGCAGAAT
AATTATTAAAATGACACAGTACTTACCAGCAAATCTTCTTGCCCTCTTCA
CTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGATGGTCTTAAGAAG
AGGAAAAATGAAACACCAATTATTGGGTTGACAGATTTCCTTAGAAACTT
TGAGAGACCGCGAAAGACGACGAGACCGTGACCGAGGCGATCGAGACAAA
GACCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGATCGAGACAGAGA
AAGAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCG
GTGAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAA
TATGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGAACCATTACGA
TAACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGG
AAGTTGAACAGAATAATTACCACGTGGCCGATCAACGAGCTGAAGAAGGC
GATGATGATTATTATCAGTAATAAAGAGCGTGAACGCGGAGGCGGAGAAG
ATCGTGACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGT
GATAGAGATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAG
AGACCGAAAAGACAGAGACAGGTGGAGGACTTGGTGGCACTAGACGTGGA
GGACCGGAAGATAATATTCGCCACTCAGGACGTGTTGATCAATGGGAAGG
GTGCTTACAAACATGCTGATGGTAAAAAGATTGATGGAAGACGTATTGTT
GTCGATGTTGAAAGAGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCT
AGATTGCAATAGTGTTTAACCACAATTCGAGAAAGCCCAGAGGATATGCA
TTTGTGGAATTCGAACACGAGAGGGACATGCACAAAATATGAAACATCTG
AAAACAAGCTGAGAAGAGAAATGGAAGCTTATGGTCCTGTCAGGAATGGG
ATCCACACAGTGACACCAATGCTGTTGGCGATCCATTCAAGACTCTATTT
GTTGGAAGAATTACCACTGCACCTCCACCTCCCACAAAAGGTGAAAGAAG
AGAACAGAGGGAAGAACGAAAACGTCAAGAAAAGAAAGATTATGCTGATT
CCAAACTAGAAGAAAAAGTAGCAACCTAAAAGCAGAATAATTATTAAAAT
GACACAGTACTTACCAGCAAATCTTCTTGCCCTCTTCACTGCAAGACCAC
CAATTCCATTCAAGCCTCCGCCAGATGGTCTTAAGAAGAGGAAAAATGAA
ACACCAATTATTGGGTTGACAGATTTCCTTAGAAACTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031406XLOC_031406Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049511-exon-scaffold_16-1575043694:314569..314735TCONS_00049511-exon-scaffold_16-1575043694:314569..314735Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:314279..314393TCONS_00049511-exon-scaffold_16-1575043694:314279..314393Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:314021..314085TCONS_00049511-exon-scaffold_16-1575043694:314021..314085Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:313773..313835TCONS_00049511-exon-scaffold_16-1575043694:313773..313835Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:313311..313392TCONS_00049511-exon-scaffold_16-1575043694:313311..313392Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:310748..310849TCONS_00049511-exon-scaffold_16-1575043694:310748..310849Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:309182..309260TCONS_00049511-exon-scaffold_16-1575043694:309182..309260Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:308621..308770TCONS_00049511-exon-scaffold_16-1575043694:308621..308770Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1575043694:307518..308382TCONS_00049511-exon-scaffold_16-1575043694:307518..308382Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:314569..314735TCONS_00049511-exon-scaffold_16-1510915933:314569..314735Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:314279..314393TCONS_00049511-exon-scaffold_16-1510915933:314279..314393Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:314021..314085TCONS_00049511-exon-scaffold_16-1510915933:314021..314085Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:313773..313835TCONS_00049511-exon-scaffold_16-1510915933:313773..313835Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:313311..313392TCONS_00049511-exon-scaffold_16-1510915933:313311..313392Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:310748..310849TCONS_00049511-exon-scaffold_16-1510915933:310748..310849Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:309182..309260TCONS_00049511-exon-scaffold_16-1510915933:309182..309260Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:308621..308770TCONS_00049511-exon-scaffold_16-1510915933:308621..308770Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1510915933:307518..308382TCONS_00049511-exon-scaffold_16-1510915933:307518..308382Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:314569..314735TCONS_00049511-exon-scaffold_16-1491911889:314569..314735Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:314279..314393TCONS_00049511-exon-scaffold_16-1491911889:314279..314393Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:314021..314085TCONS_00049511-exon-scaffold_16-1491911889:314021..314085Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:313773..313835TCONS_00049511-exon-scaffold_16-1491911889:313773..313835Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:313311..313392TCONS_00049511-exon-scaffold_16-1491911889:313311..313392Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:310748..310849TCONS_00049511-exon-scaffold_16-1491911889:310748..310849Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:309182..309260TCONS_00049511-exon-scaffold_16-1491911889:309182..309260Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:308621..308770TCONS_00049511-exon-scaffold_16-1491911889:308621..308770Clytia hemisphaericaexon
TCONS_00049511-exon-scaffold_16-1491911889:307518..308382TCONS_00049511-exon-scaffold_16-1491911889:307518..308382Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049511-proteinTCONS_00049511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:307518..314735 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
187.631	174.198	340.315	365.044	569.078	437.065	259.981	283.234	221.706	201.933	184.336	169.438	131.807	145.316	139.002	141.57	219.367	186.342	72.3928	67.1619	137.068	137.957	147.42	140.153	143.092	150.462	82.9203	74.4887	95.8479	96.5688
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR022023U1snRNP70_N
IPR034143snRNP70_RRM
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0030619U1 snRNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0030619 U1 snRNA binding
Blast
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BLAST of TCONS_00049511 vs. Swiss-Prot (Human)
Match: RU17 (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 1.978e-61
Identity = 135/215 (62.79%), Postives = 165/215 (76.74%), Query Frame = 3 
Query:   24 MTQYLPANLLALFTARPPIPFKPPPDGLKKRKNET-PIIGLTDFLRNFETTA-PPPPTKGXXXXXXXXXXXXXXXDYADSKLEEKVATWDPHSDTNAVGDPFKTLFVGRIKYETSENKLRREMEAYGPVRNIAIVFNHNSRKPRGYAFVEFEHERDMHSAYKHADGKKIDGRRIVVDVERGRTVKSWXXXXXXXXXXXXXXXXXEDNIRHSGRVD 662
            MTQ+LP NLLALF  R PIP+ PP + L   K+   P  G+  ++R FE     PPPT+ E RE+R ERKR+EK +    ++E ++  WDPH+D NA GD FKTLFV R+ Y+T+E+KLRRE E YGP++ I +V++  S KPRGYAF+E+EHERDMHSAYKHADGKKIDGRR++VDVERGRTVK WRPRRLGGGLGGTRRGG + NIRHSGR D
Sbjct:    1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD 215
The following BLAST results are available for this feature:
BLAST of TCONS_00049511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RU171.978e-6162.79U1 small nuclear ribonucleoprotein 70 kDa OS=Homo ... [more]
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