TCONS_00046389 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046389
Unique NameTCONS_00046389
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046389 ID=TCONS_00046389|Name=TCONS_00046389|organism=Clytia hemisphaerica|type=transcript|length=2206bp
CCTCACCTTAGAATCTCAATCCAAAATTGTAACGCGGCGACGACAAAACG
TAAATTAGTTGTCTATCCTTCGCAACCGCAAACAATAGACAAACGAGTGA
CATCATGTAACGATTTCCTGGACATAACGTTCCAAACAATATAAAAACTC
TGATTTGTGTGGAGTTGAGCAGAAATCAACAGCACTCAACAGCGGCAATC
AGCAGCACACAGCTTCCATAAGATATTTTAGTATTCGGTAGGATCTTTCA
TCCTAAGCGATACTAAACTAAATCTTGAAGCTCATCAACAACAGCAATTT
ATATCAGCATTTTTTTGATATAACATTTCGTGAAATcaacaattcaagat
ggcaaaTGGATCTACAATCCTCAAACTATCTCTCTTGTTGGCTATGATAA
TGGCGACTCAAGCTTATGTTCGTGTTTGTTATTACACCAATTGGTCACAA
TATCGAAACGGCCTTGGTAAATACTCGTTAAGATCACATTACCAGAAAGG
CTTGTGTACTCACTTAATGTTCTCCTTTGGAAAGGTCGTCAAATCTGGAA
ACGAATACACGATCGACCAATACGAATGGAACGATAAATCAAATCTTTAC
AAAGAGATGCAAGACTTGAAAAAAGACGATCCTGGATTGAAGACTTTGTT
GGCTATCGGTGGTTGGACACATGCATCGAAGGGATTCTCTCCAATGGTGT
CATCCAAACAAAACAGAGCTGCATTCATCAAGAATTCCATGAAATTCATT
CAAGACTATGGATTCGATGGTTTGGATTTGGATTGGGAATTCCCTGGTGA
AGGAGGAGACCGTGGTTCATCACCAATCGATCGTCAACGTTTCACTTATC
TTTGTCAAGAAATGGCTGCTGTTTACCATGACAACGGTTTACTAGTTACT
GCTGCCGTCAAAGCTGCTGAAAGCTCCGTCAGACATTCATATGAAGTTGC
CAAGGTCGCCCAAGCTTTAGATTTCATCAACCTAATGACTTATGATTTAT
ACGGCCACTGGTCAAGCACACTTGGTCATCACACCAACACTGACCGCAAT
GCTCGTCCACACAATTTACACTTGACCGTTGAAACTTGGCTCAAGAACGG
TGCAAATCCTAAAAAGTTGGTTTTAGGTCTTGGTTCATATGGAAGAGCtt
tctctttgaaaaataaatgccAATACCATCCAGGACATCCTGGGGGAAAA
GCAAGAGCTGGTCGAATGACTGGTGAAGGAGGATTCTTGGCTTACTATGA
AATCTGCCAAATGAAATTTGACAATCATGTCTGTACCAAAGACAGCAAAG
TGCACGCACCATATGGCAATGCTGGTGATCAATGGGTTGGCTATGATGAC
CAAGAATCAATCGTCTACAAAATTGAGAATGTAATGAAAAAACACAATCT
TCTGGGATACATGTTTTGGGCTTTGGATCTTGATGATTTCACTGGCAAAT
TTTGTGGACAAGGAAAATATCCTTTGATGAATGCCGCCAAAGATGCTGCT
GAAGGGCGGAGAAAATCTTACTCATGCATGACAAAGGACTCATGCGATGG
CGTCCgcccaccaccaccaccagaACCGACAATGCCCACCAACCCTCCAG
TTGTAGTGACAGGAAAATGCAAAGGAAAAGCTCCATGGGGTGCGCAATAT
GACGTATGGTGCAATCAAGGTGAAAATTGTCAACTGGCTTGTAATGAAAG
AAATGACTGCAAGCAAGGAAGACCATGTTCGGTTTGCATATGCCCCAATG
ACCCAGAGCCACCAAAAACAACGACCACTACAACGACAATGAGTACCACC
ACAACTACTACGACCACCCCCAAAACTATAACGACCACCCCAAAAACTAA
AACAACGACCACCAAGGGGCCCAAAATGAATTGCAAACCAAAATTGGAGT
TGTTCATTAAAATTAAATGGTTTTGTAATGCATATTGCTACAGATGTGAC
AAAAACATCGGAAGCAGAACAACCAAATTCTTCAATAGTTATTGCACATG
TGAGTGAAGATGAAtgaggaaaaaaagaaaaacttcgaAAGCATTTTAAG
ATTATTTATTGTGCTATTTATTTgctaatttattaatttatttttatgaa
aaactttcttaatcgaagtaacgaaagtgccaaatgattttcaaattttg
aaatttaaaatgaagtaaaaattttcaaatttcaaaatttgaaaaatgaa
aaatgg
Run BLAST on NCBI

protein sequence of TCONS_00046389-protein

>TCONS_00046389-protein ID=TCONS_00046389-protein|Name=TCONS_00046389-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MANGSTILKLSLLLAMIMATQAYVRVCYYTNWSQYRNGLGKYSLRSHYQK
GLCTHLMFSFGKVVKSGNEYTIDQYEWNDKSNLYKEMQDLKKDDPGLKTL
LAIGGWTHASKGFSPMVSSKQNRAAFIKNSMKFIQDYGFDGLDLDWEFPG
EGGDRGSSPIDRQRFTYLCQEMAAVYHDNGLLVTAAVKAAESSVRHSYEV
AKVAQALDFINLMTYDLYGHWSSTLGHHTNTDRNARPHNLHLTVETWLKN
GANPKKLVLGLGSYGRAFSLKNKCQYHPGHPGGKARAGRMTGEGGFLAYY
EICQMKFDNHVCTKDSKVHAPYGNAGDQWVGYDDQESIVYKIENVMKKHN
LLGYMFWALDLDDFTGKFCGQGKYPLMNAAKDAAEGRRKSYSCMTKDSCD
GVRPPPPPEPTMPTNPPVVVTGKCKGKAPWGAQYDVWCNQGENCQLACNE
RNDCKQGRPCSVCICPNDPEPPKTTTTTTTMSTTTTTTTTPKTITTTPKT
KTTTTKGPKMNCKPKLELFIKIKWFCNAYCYRCDKNIGSRTTKFFNSYCT
CE
Run BLAST on NCBI

transcript from alignment at scaffold_109:61055..64373-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046389 ID=TCONS_00046389|Name=TCONS_00046389|organism=Clytia hemisphaerica|type=transcript|length=3319bp|location=Sequence derived from alignment at scaffold_109:61055..64373- (Clytia hemisphaerica)
CCTCACCTTAGAATCTCAATCCAAAATTGTAACGCGGCGACGACAAAACG
TAAATTAGTTGTCTATCCTTCGCAACCGCAAACAATAGACAAACGAGTGA
CATCATGTAACGATTTCCTGGACATAACGTTCCAAACAATATAAAAACTC
TGATTTGTGTGGAGTTGAGCAGAAATCAACAGCACTCAACAGCGGCAATC
AGCAGCACACAGCTTCCATAAGATATTTTAGTATTCGGTAGGATCTTTCA
TCCTAAGCGATACTAAACTAAATCTTGAAGCTCATCAACAACAGCAATTT
ATATCAGCATTTTTTTGATATAACATTTCGTGAAATCAACAATTCAAGAT
GGCAAATGGATCTACAATCCTCAAACTATCTCTCTTGTTGGCTATGATAA
TGGCGACTCAAGCTTATGTTCGTGTTTGTTATTACACCAATTGGTCACAA
TATCGAAACGGCCTTGGTAAATACTCGTTAAGATCACATTACCAGAAAGG
CTTGTGTACTCACTTAATGTTCTCCTTTGGAAAGGTCGTCAAATCTGGAA
ACGAATACACGATCGACCAATACGAATGGAACGATAAATCAAATCTTTAC
AAAGAGGTAAGAGTGATTATTATCGGACACTTAAGTTTAGTCTTCGCCAC
GATTTGGTGCGTGCTTGTTTCCCCATTGAAATAATTAAATTAACAAAAAT
CTTATTAGCCTCTGTCTCACAGCCCCAGTGGGCAATTCTATTGTACAGAG
GATAAAAAATCCATCGGGGATAGTCATGGAGGATAGTGTAACTTTTAAAC
ATTGAATTTCAAGTTTTAATGAAATCAAAGTCAATTTCCAAGTGAGGCTG
GGGTCACGGCAGTGTCTTATTGATTGAAAAGTATACAGTAAAAAGACTCA
TTTCTTCCAGAATCATTCATTTTACTGGAACATGATATTATTCTCTAGGC
TATGTCATATCTTCCTTCATTACAAGCGTAAAACTTCTACTCCTATTGAA
GCCTAAGCTTTTATTGGGTAGACTTAATCTTTTATTCTGTAAAATCTAAC
TCTTCATCTCATTTTTCTTAGATGCAAGACTTGAAAAAAGACGATCCTGG
ATTGAAGACTTTGTTGGCTATCGGTGGTTGGACACATGCATCGAAGGGAT
TCTCTCCAATGGTGTCATCCAAACAAAACAGAGCTGCATTCATCAAGAAT
TCCATGAAATTCATTCAAGACTATGGTATGTGAAAAAATCTAAACAGTTG
AAAATAATCGATCGCCTGTAAAGCCAATTTCAGTACAATTCACAAAAGAT
AATAATCTCGAGTGCCCCCTTTTTTCAAGAGTTTAAACAATTTACTTCCT
TGAGGTATGAAATACTCTTATAACAAAGTTTCCTCAAAAGTCGGAGAAGA
GACGTGAAAAAACCAATTATAGTGGCCTTTATTATTTGAACTATTTTGGC
TATTATTTGAACTTCATTACTTCGAATTCCTCTGTAATTCAAACACTTTC
AGAAAAAGATTTCCCCGTTTGAGTTCGAATTAACAGGAGTCGACTGTAAC
ACGTCATAATATGGTCATGTACATAAGTCATATGGTCATGCATATGTATA
GAATCAATTTTTTACTTTAGGATTCGATGGTTTGGATTTGGATTGGGAAT
TCCCTGGTGAAGGAGGAGACCGTGGTTCATCACCAATCGATCGTCAACGT
TTCACTTATCTTTGTCAAGAAATGGCTGCTGTTTACCATGACAACGGTTT
ACTAGTTACTGCTGCCGTCAAAGCTGCTGAAAGCTCCGTCAGACATTCAT
ATGAAGTTGCCAAGGTCGCCCAAGCTTTAGATTTCATCAACCTAATGACT
TATGATTTATACGGCCACTGGTCAAGCACACTTGGTCATCACACCAACAC
TGACCGCAATGCTCGTCCACACAATTTACACTTGACCGTTGAAACTTGGC
TCAAGAACGGTGCAAATCCTAAAAAGTTGGTTTTAGGTCTTGGTTCATAT
GGAAGAGCTTTCTCTTTGAAAAATAAATGCCAATACCATCCAGGACATCC
TGGGGGAAAAGCAAGAGCTGGTCGAATGACTGGTGAAGGAGGATTCTTGG
CTTACTATGAAATCTGCCAAATGAAATTTGACAATCATGTCTGTACCAAA
GACAGCAAAGTGCACGCACCATATGGCAATGCTGGTGATCAATGGGTTGG
CTATGATGACCAAGAATCAATCGTCTACAAAATTGAGAATGTAATGAAAA
AACACAATCTTCTGGGATACATGTTTTGGGCTTTGGATCTTGATGATTTC
ACTGGCAAATTTTGTGGACAAGGAAAATATCCTTTGATGAATGCCGCCAA
AGATGCTGCTGAAGGGCGGAGAAAATCTTACTCATGCATGACAAAGGACT
CATGCGATGGCGTCCGCCCACCACCACCACCAGAACCGACAATGCCCACC
AACCCTCCAGTTGTAGTGACAGGAAAATGCAAAGGAAAAGCTCCATGGGG
TGCGCAATATGACGTATGGTGCAATCAAGGTGAAAATTGTCAACTGGCTT
GTAATGAAAGAAATGACTGCAAGCAAGGAAGACCATGTTCGGTGAGTTTT
CATTCACATTTTTTTGGGACACGCTTCAATACAGTGTGTCCCAAAAAAGG
TGGATAAATCTTTATTAAAGTAAAATCATCTTACCTGGGCTTAGAATGAT
TGGAATATATAAGATTAAAATTCTATATTCAATTAGATATTCAATTCCCA
AGATGATTGAATAGGTTTTTGAGATTGAAATATTAAGTATACAACTCTCA
AAATTTCACATGAATTAATGACTAACTTTTTCTTTTCTTTGCAGGTTTGC
ATATGCCCCAATGACCCAGAGCCACCAAAAACAACGACCACTACAACGAC
AATGAGTACCACCACAACTACTACGACCACCCCCAAAACTATAACGACCA
CCCCAAAAACTAAAACAACGACCACCAAGGGGCCCAAAATGAATTGCAAA
CCAAAATTGGAGTTGTTCATTAAAATTAAATGGTTTTGTAATGCATATTG
CTACAGATGTGACAAAAACATCGGAAGCAGAACAACCAAATTCTTCAATA
GTTATTGCACATGTGAGTGAAGATGAATGAGGAAAAAAAGAAAAACTTCG
AAAGCATTTTAAGATTATTTATTGTGCTATTTATTTGCTAATTTATTAAT
TTATTTTTATGAAAAACTTTCTTAATCGAAGTAACGAAAGTGCCAAATGA
TTTTCAAATTTTGAAATTTAAAATGAAGTAAAAATTTTCAAATTTCAAAA
TTTGAAAAATGAAAAATGG

Coding sequence (CDS) from alignment at scaffold_109:61055..64373-

>TCONS_00046389 ID=TCONS_00046389|Name=TCONS_00046389|organism=Clytia hemisphaerica|type=CDS|length=6636bp|location=Sequence derived from alignment at scaffold_109:61055..64373- (Clytia hemisphaerica)
GTTTGCATATGCCCCAATGACCCAGAGCCACCAAAAACAACGACCACTAC
AACGACAATGAGTACCACCACAACTACTACGACCACCCCCAAAACTATAA
CGACCACCCCAAAAACTAAAACAACGACCACCAAGGGGCCCAAAATGAAT
TGCAAACCAAAATTGGAGTTGTTCATTAAAATTAAATGGTTTTGTAATGC
ATATTGCTACAGATGTGACAAAAACATCGGAAGCAGAACAACCAAATTCT
TCAATAGTTATTGCACATGTGAGTGAGATTCGATGGTTTGGATTTGGATT
GGGAATTCCCTGGTGAAGGAGGAGACCGTGGTTCATCACCAATCGATCGT
CAACGTTTCACTTATCTTTGTCAAGAAATGGCTGCTGTTTACCATGACAA
CGGTTTACTAGTTACTGCTGCCGTCAAAGCTGCTGAAAGCTCCGTCAGAC
ATTCATATGAAGTTGCCAAGGTCGCCCAAGCTTTAGATTTCATCAACCTA
ATGACTTATGATTTATACGGCCACTGGTCAAGCACACTTGGTCATCACAC
CAACACTGACCGCAATGCTCGTCCACACAATTTACACTTGACCGTTGAAA
CTTGGCTCAAGAACGGTGCAAATCCTAAAAAGTTGGTTTTAGGTCTTGGT
TCATATGGAAGAGCTTTCTCTTTGAAAAATAAATGCCAATACCATCCAGG
ACATCCTGGGGGAAAAGCAAGAGCTGGTCGAATGACTGGTGAAGGAGGAT
TCTTGGCTTACTATGAAATCTGCCAAATGAAATTTGACAATCATGTCTGT
ACCAAAGACAGCAAAGTGCACGCACCATATGGCAATGCTGGTGATCAATG
GGTTGGCTATGATGACCAAGAATCAATCGTCTACAAAATTGAGAATGTAA
TGAAAAAACACAATCTTCTGGGATACATGTTTTGGGCTTTGGATCTTGAT
GATTTCACTGGCAAATTTTGTGGACAAGGAAAATATCCTTTGATGAATGC
CGCCAAAGATGCTGCTGAAGGGCGGAGAAAATCTTACTCATGCATGACAA
AGGACTCATGCGATGGCGTCCGCCCACCACCACCACCAGAACCGACAATG
CCCACCAACCCTCCAGTTGTAGTGACAGGAAAATGCAAAGGAAAAGCTCC
ATGGGGTGCGCAATATGACGTATGGTGCAATCAAGGTGAAAATTGTCAAC
TGGCTTGTAATGAAAGAAATGACTGCAAGCAAGGAAGACCATGTTCGATG
CAAGACTTGAAAAAAGACGATCCTGGATTGAAGACTTTGTTGGCTATCGG
TGGTTGGACACATGCATCGAAGGGATTCTCTCCAATGGTGTCATCCAAAC
AAAACAGAGCTGCATTCATCAAGAATTCCATGAAATTCATTCAAGACTAT
GATGGCAAATGGATCTACAATCCTCAAACTATCTCTCTTGTTGGCTATGA
TAATGGCGACTCAAGCTTATGTTCGTGTTTGTTATTACACCAATTGGTCA
CAATATCGAAACGGCCTTGGTAAATACTCGTTAAGATCACATTACCAGAA
AGGCTTGTGTACTCACTTAATGTTCTCCTTTGGAAAGGTCGTCAAATCTG
GAAACGAATACACGATCGACCAATACGAATGGAACGATAAATCAAATCTT
TACAAAGAGGTTTGCATATGCCCCAATGACCCAGAGCCACCAAAAACAAC
GACCACTACAACGACAATGAGTACCACCACAACTACTACGACCACCCCCA
AAACTATAACGACCACCCCAAAAACTAAAACAACGACCACCAAGGGGCCC
AAAATGAATTGCAAACCAAAATTGGAGTTGTTCATTAAAATTAAATGGTT
TTGTAATGCATATTGCTACAGATGTGACAAAAACATCGGAAGCAGAACAA
CCAAATTCTTCAATAGTTATTGCACATGTGAGTGAGATTCGATGGTTTGG
ATTTGGATTGGGAATTCCCTGGTGAAGGAGGAGACCGTGGTTCATCACCA
ATCGATCGTCAACGTTTCACTTATCTTTGTCAAGAAATGGCTGCTGTTTA
CCATGACAACGGTTTACTAGTTACTGCTGCCGTCAAAGCTGCTGAAAGCT
CCGTCAGACATTCATATGAAGTTGCCAAGGTCGCCCAAGCTTTAGATTTC
ATCAACCTAATGACTTATGATTTATACGGCCACTGGTCAAGCACACTTGG
TCATCACACCAACACTGACCGCAATGCTCGTCCACACAATTTACACTTGA
CCGTTGAAACTTGGCTCAAGAACGGTGCAAATCCTAAAAAGTTGGTTTTA
GGTCTTGGTTCATATGGAAGAGCTTTCTCTTTGAAAAATAAATGCCAATA
CCATCCAGGACATCCTGGGGGAAAAGCAAGAGCTGGTCGAATGACTGGTG
AAGGAGGATTCTTGGCTTACTATGAAATCTGCCAAATGAAATTTGACAAT
CATGTCTGTACCAAAGACAGCAAAGTGCACGCACCATATGGCAATGCTGG
TGATCAATGGGTTGGCTATGATGACCAAGAATCAATCGTCTACAAAATTG
AGAATGTAATGAAAAAACACAATCTTCTGGGATACATGTTTTGGGCTTTG
GATCTTGATGATTTCACTGGCAAATTTTGTGGACAAGGAAAATATCCTTT
GATGAATGCCGCCAAAGATGCTGCTGAAGGGCGGAGAAAATCTTACTCAT
GCATGACAAAGGACTCATGCGATGGCGTCCGCCCACCACCACCACCAGAA
CCGACAATGCCCACCAACCCTCCAGTTGTAGTGACAGGAAAATGCAAAGG
AAAAGCTCCATGGGGTGCGCAATATGACGTATGGTGCAATCAAGGTGAAA
ATTGTCAACTGGCTTGTAATGAAAGAAATGACTGCAAGCAAGGAAGACCA
TGTTCGATGCAAGACTTGAAAAAAGACGATCCTGGATTGAAGACTTTGTT
GGCTATCGGTGGTTGGACACATGCATCGAAGGGATTCTCTCCAATGGTGT
CATCCAAACAAAACAGAGCTGCATTCATCAAGAATTCCATGAAATTCATT
CAAGACTATGATGGCAAATGGATCTACAATCCTCAAACTATCTCTCTTGT
TGGCTATGATAATGGCGACTCAAGCTTATGTTCGTGTTTGTTATTACACC
AATTGGTCACAATATCGAAACGGCCTTGGTAAATACTCGTTAAGATCACA
TTACCAGAAAGGCTTGTGTACTCACTTAATGTTCTCCTTTGGAAAGGTCG
TCAAATCTGGAAACGAATACACGATCGACCAATACGAATGGAACGATAAA
TCAAATCTTTACAAAGAGGTTTGCATATGCCCCAATGACCCAGAGCCACC
AAAAACAACGACCACTACAACGACAATGAGTACCACCACAACTACTACGA
CCACCCCCAAAACTATAACGACCACCCCAAAAACTAAAACAACGACCACC
AAGGGGCCCAAAATGAATTGCAAACCAAAATTGGAGTTGTTCATTAAAAT
TAAATGGTTTTGTAATGCATATTGCTACAGATGTGACAAAAACATCGGAA
GCAGAACAACCAAATTCTTCAATAGTTATTGCACATGTGAGTGAGATTCG
ATGGTTTGGATTTGGATTGGGAATTCCCTGGTGAAGGAGGAGACCGTGGT
TCATCACCAATCGATCGTCAACGTTTCACTTATCTTTGTCAAGAAATGGC
TGCTGTTTACCATGACAACGGTTTACTAGTTACTGCTGCCGTCAAAGCTG
CTGAAAGCTCCGTCAGACATTCATATGAAGTTGCCAAGGTCGCCCAAGCT
TTAGATTTCATCAACCTAATGACTTATGATTTATACGGCCACTGGTCAAG
CACACTTGGTCATCACACCAACACTGACCGCAATGCTCGTCCACACAATT
TACACTTGACCGTTGAAACTTGGCTCAAGAACGGTGCAAATCCTAAAAAG
TTGGTTTTAGGTCTTGGTTCATATGGAAGAGCTTTCTCTTTGAAAAATAA
ATGCCAATACCATCCAGGACATCCTGGGGGAAAAGCAAGAGCTGGTCGAA
TGACTGGTGAAGGAGGATTCTTGGCTTACTATGAAATCTGCCAAATGAAA
TTTGACAATCATGTCTGTACCAAAGACAGCAAAGTGCACGCACCATATGG
CAATGCTGGTGATCAATGGGTTGGCTATGATGACCAAGAATCAATCGTCT
ACAAAATTGAGAATGTAATGAAAAAACACAATCTTCTGGGATACATGTTT
TGGGCTTTGGATCTTGATGATTTCACTGGCAAATTTTGTGGACAAGGAAA
ATATCCTTTGATGAATGCCGCCAAAGATGCTGCTGAAGGGCGGAGAAAAT
CTTACTCATGCATGACAAAGGACTCATGCGATGGCGTCCGCCCACCACCA
CCACCAGAACCGACAATGCCCACCAACCCTCCAGTTGTAGTGACAGGAAA
ATGCAAAGGAAAAGCTCCATGGGGTGCGCAATATGACGTATGGTGCAATC
AAGGTGAAAATTGTCAACTGGCTTGTAATGAAAGAAATGACTGCAAGCAA
GGAAGACCATGTTCGATGCAAGACTTGAAAAAAGACGATCCTGGATTGAA
GACTTTGTTGGCTATCGGTGGTTGGACACATGCATCGAAGGGATTCTCTC
CAATGGTGTCATCCAAACAAAACAGAGCTGCATTCATCAAGAATTCCATG
AAATTCATTCAAGACTATGATGGCAAATGGATCTACAATCCTCAAACTAT
CTCTCTTGTTGGCTATGATAATGGCGACTCAAGCTTATGTTCGTGTTTGT
TATTACACCAATTGGTCACAATATCGAAACGGCCTTGGTAAATACTCGTT
AAGATCACATTACCAGAAAGGCTTGTGTACTCACTTAATGTTCTCCTTTG
GAAAGGTCGTCAAATCTGGAAACGAATACACGATCGACCAATACGAATGG
AACGATAAATCAAATCTTTACAAAGAGGTTTGCATATGCCCCAATGACCC
AGAGCCACCAAAAACAACGACCACTACAACGACAATGAGTACCACCACAA
CTACTACGACCACCCCCAAAACTATAACGACCACCCCAAAAACTAAAACA
ACGACCACCAAGGGGCCCAAAATGAATTGCAAACCAAAATTGGAGTTGTT
CATTAAAATTAAATGGTTTTGTAATGCATATTGCTACAGATGTGACAAAA
ACATCGGAAGCAGAACAACCAAATTCTTCAATAGTTATTGCACATGTGAG
TGAGATTCGATGGTTTGGATTTGGATTGGGAATTCCCTGGTGAAGGAGGA
GACCGTGGTTCATCACCAATCGATCGTCAACGTTTCACTTATCTTTGTCA
AGAAATGGCTGCTGTTTACCATGACAACGGTTTACTAGTTACTGCTGCCG
TCAAAGCTGCTGAAAGCTCCGTCAGACATTCATATGAAGTTGCCAAGGTC
GCCCAAGCTTTAGATTTCATCAACCTAATGACTTATGATTTATACGGCCA
CTGGTCAAGCACACTTGGTCATCACACCAACACTGACCGCAATGCTCGTC
CACACAATTTACACTTGACCGTTGAAACTTGGCTCAAGAACGGTGCAAAT
CCTAAAAAGTTGGTTTTAGGTCTTGGTTCATATGGAAGAGCTTTCTCTTT
GAAAAATAAATGCCAATACCATCCAGGACATCCTGGGGGAAAAGCAAGAG
CTGGTCGAATGACTGGTGAAGGAGGATTCTTGGCTTACTATGAAATCTGC
CAAATGAAATTTGACAATCATGTCTGTACCAAAGACAGCAAAGTGCACGC
ACCATATGGCAATGCTGGTGATCAATGGGTTGGCTATGATGACCAAGAAT
CAATCGTCTACAAAATTGAGAATGTAATGAAAAAACACAATCTTCTGGGA
TACATGTTTTGGGCTTTGGATCTTGATGATTTCACTGGCAAATTTTGTGG
ACAAGGAAAATATCCTTTGATGAATGCCGCCAAAGATGCTGCTGAAGGGC
GGAGAAAATCTTACTCATGCATGACAAAGGACTCATGCGATGGCGTCCGC
CCACCACCACCACCAGAACCGACAATGCCCACCAACCCTCCAGTTGTAGT
GACAGGAAAATGCAAAGGAAAAGCTCCATGGGGTGCGCAATATGACGTAT
GGTGCAATCAAGGTGAAAATTGTCAACTGGCTTGTAATGAAAGAAATGAC
TGCAAGCAAGGAAGACCATGTTCGATGCAAGACTTGAAAAAAGACGATCC
TGGATTGAAGACTTTGTTGGCTATCGGTGGTTGGACACATGCATCGAAGG
GATTCTCTCCAATGGTGTCATCCAAACAAAACAGAGCTGCATTCATCAAG
AATTCCATGAAATTCATTCAAGACTATGATGGCAAATGGATCTACAATCC
TCAAACTATCTCTCTTGTTGGCTATGATAATGGCGACTCAAGCTTATGTT
CGTGTTTGTTATTACACCAATTGGTCACAATATCGAAACGGCCTTGGTAA
ATACTCGTTAAGATCACATTACCAGAAAGGCTTGTGTACTCACTTAATGT
TCTCCTTTGGAAAGGTCGTCAAATCTGGAAACGAATACACGATCGACCAA
TACGAATGGAACGATAAATCAAATCTTTACAAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029604XLOC_029604Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046389-exon-scaffold_109-1575043694:63768..64373TCONS_00046389-exon-scaffold_109-1575043694:63768..64373Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1575043694:63149..63302TCONS_00046389-exon-scaffold_109-1575043694:63149..63302Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1575043694:61783..62753TCONS_00046389-exon-scaffold_109-1575043694:61783..62753Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1575043694:61055..61529TCONS_00046389-exon-scaffold_109-1575043694:61055..61529Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1510915933:63768..64373TCONS_00046389-exon-scaffold_109-1510915933:63768..64373Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1510915933:63149..63302TCONS_00046389-exon-scaffold_109-1510915933:63149..63302Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1510915933:61783..62753TCONS_00046389-exon-scaffold_109-1510915933:61783..62753Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1510915933:61055..61529TCONS_00046389-exon-scaffold_109-1510915933:61055..61529Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1491911889:63768..64373TCONS_00046389-exon-scaffold_109-1491911889:63768..64373Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1491911889:63149..63302TCONS_00046389-exon-scaffold_109-1491911889:63149..63302Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1491911889:61783..62753TCONS_00046389-exon-scaffold_109-1491911889:61783..62753Clytia hemisphaericaexon
TCONS_00046389-exon-scaffold_109-1491911889:61055..61529TCONS_00046389-exon-scaffold_109-1491911889:61055..61529Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046389-proteinTCONS_00046389-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:61055..64373 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.748303	0.782024	0.804601	1.0244	2.1562	1.39741	0.776573	2.32947	1.43973	12.7883	2.03387	0.381791	108.478	16.7921	321.842	453.286	8.53786	9.57697	0.305559	0.442289	0.400347	0.354749	1.85673	1.9304	3.94833	2.2477	0.123573	0.261402	0.29636	0.323285
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
IPR029070Chitinase_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Blast
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BLAST of TCONS_00046389 vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 7.156e-91
Identity = 158/384 (41.15%), Postives = 224/384 (58.33%), Query Frame = 1 
Query:  382 LLLAMIMATQAYVRVCYYTNWSQYRNGLGKYSLRSHYQKGLCTHLMFSFGKVVKSGNEYTIDQYEWNDKSNLYKEMQDLKKDDPGLKTLLAIGGWTHASKGFSPMVSSKQNRAAFIKNSMKFIQDYGFDGLDLDWEFPGEGGDRGSSPIDRQRFTYLCQEMAAVYHDNG-------LLVTAAVKAAESSVRHSYEVAKVAQALDFINLMTYDLYGHWSSTLGHHTNTDRN------ARPHNLHLTVETWLKNGANPKKLVLGLGSYGRAFSLKNKCQYHPGHPG-GKARAGRMTGEGGFLAYYEICQMKFDNHVCTKDSKVHAPYGNAGDQWVGYDDQESIVYKIENVMKKHNLLGYMFWALDLDDFTGKFCGQGKYPLMNAAK 1491
            ++L MI    A   VCY+TNW+QYR G  ++ L       LCTHL+++F  +      + +   EWND++ LY+E   LKK +P LKTLLAIGGW   ++ F+ MV++  NR  F+ ++++F++ Y FDGLDLDWE+P   G +GS  +D++RFT L Q++A  +           LL++AAV A ++ V   YEV K+AQ LDF+NLM YD +G W    GH++   +       A   N+   V+ WL+ G    KL+LG+ +YGR+F+L +      G P  G    G  T EGG LAYYE+C  K       +D KV  PY    +QWVG+DD ES   K+ + +K+  L G M WALDLDDF G  C QG+YPL+   +
Sbjct:   11 MVLLMIPWGSAAKLVCYFTNWAQYRQGEARF-LPKDLDPSLCTHLIYAFAGMTN----HQLSTTEWNDET-LYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYP---GSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV--PYIFRDNQWVGFDDVESFKTKV-SYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLR 382
The following BLAST results are available for this feature:
BLAST of TCONS_00046389 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT17.156e-9141.15Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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