TCONS_00046389-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046389-protein
Unique NameTCONS_00046389-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length552

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046389-protein ID=TCONS_00046389-protein|Name=TCONS_00046389-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MANGSTILKLSLLLAMIMATQAYVRVCYYTNWSQYRNGLGKYSLRSHYQK
GLCTHLMFSFGKVVKSGNEYTIDQYEWNDKSNLYKEMQDLKKDDPGLKTL
LAIGGWTHASKGFSPMVSSKQNRAAFIKNSMKFIQDYGFDGLDLDWEFPG
EGGDRGSSPIDRQRFTYLCQEMAAVYHDNGLLVTAAVKAAESSVRHSYEV
AKVAQALDFINLMTYDLYGHWSSTLGHHTNTDRNARPHNLHLTVETWLKN
GANPKKLVLGLGSYGRAFSLKNKCQYHPGHPGGKARAGRMTGEGGFLAYY
EICQMKFDNHVCTKDSKVHAPYGNAGDQWVGYDDQESIVYKIENVMKKHN
LLGYMFWALDLDDFTGKFCGQGKYPLMNAAKDAAEGRRKSYSCMTKDSCD
GVRPPPPPEPTMPTNPPVVVTGKCKGKAPWGAQYDVWCNQGENCQLACNE
RNDCKQGRPCSVCICPNDPEPPKTTTTTTTMSTTTTTTTTPKTITTTPKT
KTTTTKGPKMNCKPKLELFIKIKWFCNAYCYRCDKNIGSRTTKFFNSYCT
CE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029604XLOC_029604Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046389TCONS_00046389Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
IPR029070Chitinase_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 23..362
e-value: 2.4E-101
score: 352.7
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 26..362
e-value: 1.2E-78
score: 264.8
NoneNo IPR availableGENE3D3.20.20.80coord: 17..399
e-value: 1.8E-89
score: 300.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..502
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 139..147
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 23..264
coord: 333..383
IPR029070Chitinase insertion domainSUPERFAMILY54556Chitinase insertion domaincoord: 264..332

Blast
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BLAST of TCONS_00046389-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 9.603e-95
Identity = 168/432 (38.89%), Postives = 240/432 (55.56%), Query Frame = 0 
Query:   12 LLLAMIMATQAYVRVCYYTNWSQYRNGLGKYSLRSHYQKGLCTHLMFSFGKVVKSGNEYTIDQYEWNDKSNLYKEMQDLKKDDPGLKTLLAIGGWTHASKGFSPMVSSKQNRAAFIKNSMKFIQDYGFDGLDLDWEFPGEGGDRGSSPIDRQRFTYLCQEMAAVYHDNG-------LLVTAAVKAAESSVRHSYEVAKVAQALDFINLMTYDLYGHWSSTLGHHTNTDRN------ARPHNLHLTVETWLKNGANPKKLVLGLGSYGRAFSLKNKCQYHPGHPG-GKARAGRMTGEGGFLAYYEICQMKFDNHVCTKDSKVHAPYGNAGDQWVGYDDQESIVYKIENVMKKHNLLGYMFWALDLDDFTGKFCGQGKYPLMNAAKDAAEGRRKSYSCMTKDSCDGVRPPPPPEPTMPTNPPVVVTGK-CKGKA 428
            ++L MI    A   VCY+TNW+QYR G  ++ L       LCTHL+++F  +      + +   EWND++ LY+E   LKK +P LKTLLAIGGW   ++ F+ MV++  NR  F+ ++++F++ Y FDGLDLDWE+PG    +GS  +D++RFT L Q++A  +           LL++AAV A ++ V   YEV K+AQ LDF+NLM YD +G W    GH++   +       A   N+   V+ WL+ G    KL+LG+ +YGR+F+L +      G P  G    G  T EGG LAYYE+C  K       +D KV  PY    +QWVG+DD ES   K+ + +K+  L G M WALDLDDF G  C QG+YPL+         R++            +  P P +P+ P + P       C+GKA
Sbjct:   11 MVLLMIPWGSAAKLVCYFTNWAQYRQGEARF-LPKDLDPSLCTHLIYAFAGMTN----HQLSTTEWNDET-LYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGS---QGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV--PYIFRDNQWVGFDDVESFKTKV-SYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTL------RQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQGKA 424
The following BLAST results are available for this feature:
BLAST of TCONS_00046389-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT19.603e-9538.89Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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