TCONS_00021263 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021263
Unique NameTCONS_00021263
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length920

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021263 ID=TCONS_00021263|Name=TCONS_00021263|organism=Clytia hemisphaerica|type=transcript|length=920bp
CAACTGAAGAACTATACTATAAAGCATCAAGATCTGAAGTGATGTATATC
ATCATGTATAGTATAGTATAAACTGAACTCACATTTGGTTAGAAACAGAA
TTTATCAATAATTGAAACTTGCATGGTTATCCCATCATCCATATTTTATA
AGCTGGCAAATCCATTCTACGTACCCTTTTAATAGCGTTGTTGTTGGATT
ATTTGATTATTATTGTCGAGATATGTTTTTGTCTATTACTCATGGTATCA
TTGCATTCTTGACCTACATACAGCAGaatgatggcaaaaatgaagataCA
ATAGAAGCAGATGATCCCTTGGATGAAAATGATAATCCTGACGGTCAATA
TCTCAATGTCAAACGAAACGATGATAAAGTtcaattaaaattaaatattt
cttgGCAGCCCAATGGTTCAAACGAATACATTTCAATCAAACGATATATT
GACGCAAATTACCACAATGCAGAAACAGTGTTTCAGAATGCATTAAAAGA
TGAAATATTTACTTATATTGTTGAGAATACTAAAGATGATAAGAAAGATC
CTGATTTGATAAAGGCTGTGCGACAAATGATAAATACTCCTGAAAAGGTC
CCATTCTACAAactatatcaaaacaaactgaaTAAATATGCCATCAAAGC
CAAGCTAGACAGAGGTGATGACCCTCTAGCGCAGGATGAAAAGCTTGGTG
AAACATTTTTGCATTTATTGTGTGGTGGAAAAAGAAGGGATAGGCAAATT
ATGAGAGATATTGTGACGATGATTTGCGAGAAAGCGCCTTACATTAAGAC
CAAAAGGTCCAAAAAAGGCAAGACCCCATACCAGCTGGCTAAAATGACAC
ATAAAAACGATATCCTACATCTATTAGGTAAGAATCATATTACAGTAGag
tttccttaactcaaacgaTC
Run BLAST on NCBI

protein sequence of TCONS_00021263-protein

>TCONS_00021263-protein ID=TCONS_00021263-protein|Name=TCONS_00021263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MFLSITHGIIAFLTYIQQNDGKNEDTIEADDPLDENDNPDGQYLNVKRND
DKVQLKLNISWQPNGSNEYISIKRYIDANYHNAETVFQNALKDEIFTYIV
ENTKDDKKDPDLIKAVRQMINTPEKVPFYKLYQNKLNKYAIKAKLDRGDD
PLAQDEKLGETFLHLLCGGKRRDRQIMRDIVTMICEKAPYIKTKRSKKGK
TPYQLAKMTHKNDILHLLGKNHITVEFP
Run BLAST on NCBI

transcript from alignment at sc0000380:256657..267298+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021263 ID=TCONS_00021263|Name=TCONS_00021263|organism=Clytia hemisphaerica|type=transcript|length=10642bp|location=Sequence derived from alignment at sc0000380:256657..267298+ (Clytia hemisphaerica)
CAACTGAAGAACTATACTATAAAGCATCAAGATCTGAAGTGATGTATATC ATCATGTATAGTATAGTATAAACTGAACTCACATTTGGTTAGAAACAGAA TTTATCAATAATTGAAACTTGCATGGTTATCCCATCATCCATATTTTATA AGCTGGCAAATCCATTCTACGTACCCTTTTAATAGCGTTGTTGTTGGATT ATTTGATTATTATTGTCGAGATATGTTTTTGTCTATTACTCATGGTATCA TTGCATTCTTGACCTACATACAGCAGGTACCTACCGTAGATTTGTCTATT ATTGACATGTCTCCTTTAATTTTGGCAcatttagtagggggaaatacctt tcccgtaattcaaatttcccaGAAATgacccgggaaaatgtgcgctccac cgttgtgtataaaattgtttcggaggtaaaaaatgtgtttttgcctgcga ggggttagggaaagtgggatttgagcctctaacttttgacagcgaccttc ttttggcaaaatattttcagggtggtataatatgatgaatagattgaaca tactaaaatttgaggggattttgtttgACAGAACCAACCTTCCCTAtggg aacgcaggcaaaaacgggtttgttttacctccagagaccaaacggtggag agcatcaaaataatgtgcgcgcattagttttacgaattacgggaaaggtg tatttgtTCGTTTTTTCGAGGTCGCTCCCGagagaccttttttcaaagag gccaccctgttgaataagtaagtaagtaagtaagtaagtaagtatttatt taccatttaacactacagaaaagatacaagtgatgatatgcacaaaaaat atatggaagGAGACCGCATGtcaataattatgtagtccagcagaaaaaaa atgataaaaccatgcataattattacaatatgcatgatacagtaattatg catggctctatcattgtttttatggctggactacataattattcaacagg acgtcctctttgaaaaaaggtctattgttttggtcaaagcaattgttata catttttggaaagctaccgtaagttagtctaatgtcgacatccgtcttct aatttcgacacccttttttagagataggaacaatagaaactgaggaaggt cagaatcgctgattgactttcATTAGCATGCTGGGAAGAAGTTATATCGG Atcgcccaaagttaccttcatgtttttattttattttcttatctctgatc ctgtctttctcttttctgactgtttgagtttctgagacttagattctcat ttctgactgagttttcatgcctatcaatcatttttccatcaatttcgacc agtctaattttcgcaccgagtgggattcaaaccaccaccaaagaaagacc ttcgaattcggaagccagcgctctatccgtNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAATCAATTAaaacaatgtaacaaaaaag TTACAGAATTATGTCAATTATGAACGACAGGTGAGACTTTTATTTATGGC TTTTATTCGCCAATACGATGACATAGTTTTTGGCTAATTTTACGAAAAga aacacacccctgtctcacataTCCCTCATATCTGTTAAAGAGTTTTTATG AATACGGCCGAAGAGTGGGGAAGCGGTACATCATATTATCTCAGTGACGC TTATTAAAAGGGACAAGGGGTGAAACTTTCCACCTCTTAGCGAGTTTATT TCGATTTTCCTTTTAGTTCAAGCTGCAAAAATATCTTGTTTCGATGTTTT TCCATTCGATgtaatttttacttaaaaaggaCGTGAGAATTTCGGTACGG TTTTCCTTTAAACTACCTTAAATTTCCATTTGATGAGATAGGGATATGGA GGCCAAGTAGAAATAAAGAGCATTGAGAAATGGGAACTTTCATCGGGTAA AATTTGACAGGCTCGGAGATGCTTCGGTCGAGGTCTTGAAAAGGCTGAAA GATGCTTATAACGATACTAACGGTGTATTTTACCTTTTTCATAGTCCACC TGGATTTCAAAACTTcaccgagacaggggtgtataaatcttacattttac TTTAAGGAGACGGGGGTGTgtaaatgttaatttttattccCAGTTTTACA GATGTTATTTTCTGtctataaactttcgcgaatggcccttttaaaagaat tttcaaaaaatgctgtgGCAAAGGAATTTGTCCGCGCGGTCATATTTTTG GATGCGGAACATACGAAATTTAGAATACGGGCATTGTGAGATAACGATGT TTCAGAACCCTGATCTTGCCACTCCATGCTCATTGCTAGGTCTCCAGTGG TCTAGATTGGATGAATCACAACAATTCTTCTCTCGtgctattttgttttt ttctttttcatttcagtcattttcattttttatgggaaCACAATTGCAAT ATCATTTATCCAGATGACACGTGTATTTTCCACATTTCCACTGTCGTAAT ATCATAATGATACACATTCATTGGCGAAGTCAAGAATCTGGAAGCCTTCC GGAGAATACCTGTGTCAGAGATCCGGTGGAGCCCtgcaaaaccatcccca ttgtAAACTTCGAGCTGGAATATAGATTTTCTAACCCAATCGGGACAATA CGattagatagaaattttcatccacactgaataagcaaaaagctccaccg gggcggcATTGAGACAGTGGTGCGTGTGGTGAGAGAATGAAAAGAACGcc cagaaagaaaagaaagaccaaCGAAGTTACAGTATATATTCTATTATAAC TTGATTGTAATGATCAGTCCCTGGTAAGAATTCTTGATATGATCTGAAAA GAtcgttgaagatctttcaagatctttaacaagtaagaatcttaaaaaat ctttgtaagatcttacaacgATTCTTAggcaatcttgaaaatttcttcca acaaaaagatctttaaagattttgtaaagAAATTGTAAAGAGTTGTCAAG ATTCTTCCCGCATATTTATAGtaagaaaatttattatttcTTATTAAGTT CTTAAGCAGAATCTTGAgccataaaatattttaagattcttTGCGTAACT TATAACGTttttataaagagactttccaaatcttaacTAACTATTATGTA CAAAGAAGCTTTAAGATTCTTAGTGGTTCTTATTAAGTTCGGGTTAAGAA TCTTAAAAACATGTAAATTTCTGGTTatgattgtttttcataagaaggaG TCTTTAGACTCAAGGAGAGCAATCTCTTAGGATAGTATTTACGAATCAGT TTTTGGTTAAATTCGAAATACGGTAAGTTTTTCTTGTGTGTGTTTGTTAT CATTGATTGTATTATTAATGAAATAGGTGATTAATGAGAAGCATTCACGA GGTCATCGGTTGAATGATGTTACTCGAGCAAAGCTTTCGGCCCTTATTCA ATAACTGAAGGGGGATAGTAGTAGTAAGATTCCgtcagcgaccgtagtgc agtggtagagcatccggctacggtgcgcaaggttgtggttTCGACCCCCA GCCGGTTCaaaccaaagattcccaaaatggtacttggtaCCTCtgtgctt gatgctcagcaattaagagaaggatcaagggtaagtggagctatcaaggg agaaagagtgacgccctcccctaccttcgggtagaacTGCTGGCGTAGAC TTATTTTTACTTAAGATTCCGGCAAGATTCTTGAATCACTGTAAGGGACA AGAATCTTAttcaaaacttataaaaaagtctTATCAGATCGtcaaagatc ttgaaagatcttgaaagatcttgGCACGTTCgtagtaagaaactgaaaaa gaataagcaaagtttcttgataagatcttttcaagaacttttcaagaatt tttaccagggagtgacctcatttttaattttcgagccacttttttaaatg ttttatgtatttcgtaacgtatattattttatgaattgttaaatttaata aaaaaggtggttcttattttcttcttcacgacTCTCAAGCAGCACGCTCT CCCTGAACAGCTCATAATGGTAACAATCGGTAACTAAATAAAGaagaaca attaaaaatacTATCATTCATATGACCGTTAGAAGATCCATGGTACAGTA GATTTTTCAGCTTCAaactttagacaaattgacagTCGCTCAAACTCAAA AAGCTCGTTAGATAAACTGCCGAAGTTACGGTGACAAGAAACAACGCACA CTAATTGATGAGAAGCACAAAAAACAATCTAGATTTCAACATAGATGAGA TAATTGTTTCATACATATAACAATGTAACTTACATTGTCTCGGACACTTC TCAAGTTTAGTGAAAGCAGTCCGCAATGATTATGTGATATTGACAAAACG TCTCGCTTCATTTGATCCGTTTTTCCtgaataaaaataaagtaaaaacat cATTTGAACTTGAACTTTCAAAGTATTGAAATCAACGGATCATCAGTCGC TTTTGTTAGCAGTGAAGTAAGTAAGTCTATAATCTTTAGTAAGAGAAAAC GGATATGAATTTGATGCAGTGGTGTATTTAGGATTGTTAGGCATCGCTGA ATAGTATTCTATAtgatataaaaaagattgaatgggtgaaaaatttttca atgggCACAATACCTTATTAGATTTAAAGAATGAatcttgtaaagaaaaa atgaaagccccgttcatcttcattttcccccgttttcactttaaagttga aattggCGTATTTGTCTGACGCGTTCTAGCTCATCTGCACAGAGTAGGGA AAAACccagggggtacttaggcaaatggaagtacggtatgtgccaccctt aagagtaccttttttggataaagtccgggtaagggtcggaaaattcacaa NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAatgtcgggcggcacccccc tcGTCAGATCGCAACCCTAGGATCCTCCCCCCGGGGGAAaacccgttgca aatgcacaccCCGTGCAAATGCCCAAGGATTTTTCTGACTGCCAAATATA GTCCATCTAAAATCGATGCAAATTTATGCCAAATTCATTCCATAAAGGCA GGTGTCCACTTTCGTGCGAAGCATTTATGACATTAAGTTTTTCGAATATA GTCGCCTGGTATTCAacttttatagcttaaaaaGTCACTCACGCATTAAA TGTAATGCGCCGTTTTTAATTCTCCTTTTGGAAAACGAAAGCTGTTATGC AAGTTACGATTGATTCGTTTTTTATACTACTTAATTGACAAGGAATTTAC GATGTTCTCTACCGTTTTGACTTTCTTGACGTCACAACTATGTGTAAGTA CTTTCGTTTACATAATGAAAACACACGGGTTTTACCAAGCTgtccgttga gccatcgccgcacagcaaactcacgcaattcataacatgttataccgaac tggcaaaagacgggggtaatgttattataatatgggtaaaagtacacctt tttttaacctgactgaaattcgagctgttactagcaaccctgcggggccc aaggcgccgagtatgcacccggcacagtgacaaggcgttactagcaaccc tgaNaacctgactgaaattcgagccgttactagcaaccctgcggggccca aggcgccgagtatgcacccggcacagtgacaaggcgttactagcaaccct gaccctacctaactgttagtcaatcaattccaaacaacaaaacccccgga aaggtgactatcagcgatccgtggataagaaaataaaataaaaaaatgaa ggtatcTTTGGGCGATCCGATATAACTCTCTCCCGGAGAGGATCatatca gtgatttcgaccttactattattcctatctataaaggaggctgtcaaaat tagaagacggatgtcgacattacttttaggttccaatttttttttggaca ctttggtgtgattttcaaacaaatatgacggtctcaggcaaaaatcgtag ggtcaaaaattaaaaaaaattttagctcgagaaaaaaaagacctgttgta tatttttggaaagctctcaaaaaattaagattagagatatattgcaagta taggtgatttctgtacctaactcgaaaTATATATCAAAATTACCAATATC AATCATTAAATCGTACTCttcctatcacgtcacagattgttgatgTATGA GAAGTCATCACTAAACACTAATTAACATGCTTTCCACACGAAAAGATatc caaattaaaaaaactttttgcgtGCAAGGGTTTTTTTAGTTGGCCTTTAC CGTGaaccaaaaataataaaaagaacctgGTTTCCTTTTAAATTTAATGT GACTGCCATACCGCAAACAACTCCACCCAGCTGTCTGGgtgatcaaaatg aaaataaggaGACAAATGAGTGTGCGGCCTCTTGGTGCCTCGAGTGTGTG CTTACAACGATAAGTAATAAGAAAGCGCGCAAATAATTTTTATCACATGA CTGGCAGCGTAGTAAAGTTATAAAATGTTAATGACGGACACAAAAAAATG TGCAAGCACGTTTCATGTTGTTTGAAATGGCTTCCcatttgaatgttttt tattgaaagaattgAAATGTTTTAACAGAACTTCTCgcttgatggatgaa cttgttcgatataAGTATATTTACCAAGAATTTtattaaaggtttgtttt tactATTTTGCAGATCCTGTGTTGAGATTAAAGGGGGTGTTGATAATAGA TGAATCTACAgtataatgcataatgcatccTGTCAGTATAGCCCTAACTC TCCATACAAAATTTacgggaaacacatatttggatTTTATACTCAATGCT GCACACAAGCACAAGAAGCTAAAATCCCACAGAAGCAGGATAAAAATCAG TTTGCAAAAAAGAGTCacatagaagatttttcaaattcacttttctattt tccctttttttttttgcaaaaattccagaaataaaaataaagggaTAGTG ATAATTGAGCACTACagtatccattgatgatccgggGCACTATATATATT CTATCAGTGTAGCTCTAATCCTTCAGAGAAAATACAATATAAAGAAAACG CATTTATTGGACTTTTCTGTGGGCCAATGCtgcactttcgatttcacctA AATGTGATTGGTTTGAAAGTAGATGAGTTTTAAATCATTCAACATGACAT TGcaactagcaaaaggtctattgtgtaAAGCTTTAATCACCCTGTGTACT CCTAACTTtagaaaatgattgaaaatgtTGTCCACCCGTCCTGTGTGAGG GAGTTTGCAGGTGTTTTAACTCAAAATGATACCCTGGAGCAGACAAATTT GAGATCATTTGTAATTCAATTTAGGCAGAAATAAGGTGTTGTTGGCAAAC tgaacaaaaaaagttttgcaGAGAAAACACTCAAACTACTGAAATCAAGT CAAAGTATTGCAAACATTAGTGATTCTAATCAAGGTTTATTAAAGGTTTT CTGCAAAGTTCAAAGCTCAtttctttaaagggataatcagatggtttgag atatttggcctgCAGATCCCTTTCATGGTCCATTTTTGTCAAACTGTTTC ATATATCATATAAGACATTCAtgcttcaactttttttcacttttagcAAG AAAACGATATAGTTTTTTAATGTAAAGAACCGATATTTTgagaaatcaat ttttggaaagTAGTGAGGCCAGTGTGGGCCAATAAAATAATTGTacactt tttgcaaaaaaacattaaatttggCACAGACCTAAATAAACAATTTCTGT CCGGgagcccaaataaatttttcctttttttccctGTTTCAGCCCACTTT CTGCAGACATCAGCGAAAAAATGTTAGCCTAGAGGTCATCTCGGAAAATA TGGCCATTTCATATATCGTTAGATCGGAAATTGTATACGTAGTNAAAATG TTAGCCTAGAGGTCATCTCGGAAAATATGGCCATTTCATATATCGCTAGA TCGGAAATTGTATACGTAGGTTCCAAAAAAGGATTATCTAATACCGTAAA AATCAACccaataaaagttattcatcCTCTAACTAGGGTTAATGAATAAA AGTAGAGCCCAGACCTCCCAAACCAGCCCTTACAGAGACTAAACTTTCGA ATTTAGGAgcgaaaaattggatttttgcaAAGGAGATTAAATTAAGCAAC CTTTGACCAAGGGAATTTAAAATTGATTGAAGAAACTTAATAATTTTCCC TCATTGTTACCTTTTCTGGGCAAGAACATTATATGGCAAATTTGCGCAAC CACTGAAACCTTTTCTTAGGGAAAGCCTGGGAAAGCTTGCATTGTTTGAT GCAGTGATCATCTCGCAATCAGGGTTTTGCTTAACTGGTGGTCTTAGAGA Gactcaaaatatttattattattattatagtattattattttatgaccta ataactaaaaatgtttatttttgggaACTTGCCTACTAGTACTGTAAAAC ATTTTATTGATTTAAGACAAAGATGGCACACTGTATCAGACGGACTTGAG TAAGATTAGTAAAATCattttgataaattatttctaatttttcagaatga tggcaaaaatgaagataCAATAGAAGCAGATGATCCCTTGGATGAAAATG TATGTGAAATAAATTCTTTAACTTTTTAAGCCTTGTCTTTTCCACTTTGA CCTTGTCTTAATGAAATGCatccttttaaaaaaagatgtAAGGGTTAAGT AGTAACTCAGTATATTATTTGTTAGAGTTCAGGTATTGGTTAAAGAACGC AAAGCAAAACAAGAATTAGTACACGCTTAATTAAATGGAATTTCAGTTGT TTTTCATCATCCAATCTTGACCACCCACCTGGCATTGATCCCTACATCAA ACTACCGATCCGACCCCACCTTAATGAATAAAATTGCCCACAGAAAAAAA CTCGAACTTTTACTTCACACGTATATTACAATCCTACTTGGATTCTTTTT AGGATAATCCTGACGGTCAATATCTCAATGTCAAACGAAACGATGATAAA GTtcaattaaaattaaatatttcttgGCAGCCCAATGGTTCAAACGAATA CATTTCAATCAAACGATATATTGACGCAAATTACCACAATGCAGAAACAG TGTTTCAGAATGCATTAAAAGATGAAATATTTACTTATATTGTTGAGAAT ACTAAAGATGATAAGAAAGATCCTGATTTGATAAAGGCTGTGCGACAAAT GATAAATACTCCTGAAAAGGTCCCATTCTACAAactatatcaaaacaaac tgaaTAAATATGCCATCAAAGCCAAGCTAGACAGAGGTGATGACCCTCTA GCGCAGGATGAAAAGCTTGGTGAAACATTTTTGCATTTATTGTGTGGTGG AAAAAGAAGGGATAGGCAAATTATGAGAGATATTGTGACGATGATTTGCG AGAAAGCGCCTTACATTAAGACCAAAAGGTCCAAAAAAGGCAAGACCCCA TACCAGCTGGCTAAAATGACACATAAAAACGATATCCTACATCTATTAGG TAAGAATCATATTACAGTAGagtttccttaactcaaacgaTC

Coding sequence (CDS) from alignment at sc0000380:256657..267298+

>TCONS_00021263 ID=TCONS_00021263|Name=TCONS_00021263|organism=Clytia hemisphaerica|type=CDS|length=2061bp|location=Sequence derived from alignment at sc0000380:256657..267298+ (Clytia hemisphaerica)
ATGTTTTTGTCTATTACTCATGGTATCATTGCATTCTTGACCTACATACA
GCAGaatgatggcaaaaatgaagataCAATAGAAGCAGATGATCCCTTGG
ATGAAAATGATAATCCTGACGGTCAATATCTCAATGTCAAACGAAACGAT
GATAAAGTtcaattaaaattaaatatttcttgGCAGCCCAATGGTTCAAA
CGAATACATTTCAATCAAACGATATATTGACGCAAATTACCACAATGCAG
AAACAGTGTTTCAGAATGCATTAAAAGATGAAATATTTACTTATATTGTT
GAGAATACTAAAGATGATAAGAAAGATCCTGATTTGATAAAGGCTGTGCG
ACAAATGATAAATACTCCTGAAAAGGTCCCATTCTACAAactatatcaaa
acaaactgaaTAAATATGCCATCAAAGCCAAGCTAGACAGAGGTGATGAC
CCTCTAGCGCAGGATGAAAAGCTTGGTGAAACATTTTTGCATTTATTGTG
TGGTGGAAAAAGAAGGGATAGGCAAATTATGAGAGATATTGTGACGATGA
TTTGCGAGAAAGCGCCTTACATTAAGACCAAAAGGTCCAAAAAAGGCAAG
ACCCCATACCAGCTGGCTAAAATGACACATAAAAACGATATCCTACATCT
ATTAGGTAAGAATCATATTACAGTAGagtttccttaaATGTTTTTGTCTA
TTACTCATGGTATCATTGCATTCTTGACCTACATACAGCAGaatgatggc
aaaaatgaagataCAATAGAAGCAGATGATCCCTTGGATGAAAATGATAA
TCCTGACGGTCAATATCTCAATGTCAAACGAAACGATGATAAAGTtcaat
taaaattaaatatttcttgGCAGCCCAATGGTTCAAACGAATACATTTCA
ATCAAACGATATATTGACGCAAATTACCACAATGCAGAAACAGTGTTTCA
GAATGCATTAAAAGATGAAATATTTACTTATATTGTTGAGAATACTAAAG
ATGATAAGAAAGATCCTGATTTGATAAAGGCTGTGCGACAAATGATAAAT
ACTCCTGAAAAGGTCCCATTCTACAAactatatcaaaacaaactgaaTAA
ATATGCCATCAAAGCCAAGCTAGACAGAGGTGATGACCCTCTAGCGCAGG
ATGAAAAGCTTGGTGAAACATTTTTGCATTTATTGTGTGGTGGAAAAAGA
AGGGATAGGCAAATTATGAGAGATATTGTGACGATGATTTGCGAGAAAGC
GCCTTACATTAAGACCAAAAGGTCCAAAAAAGGCAAGACCCCATACCAGC
TGGCTAAAATGACACATAAAAACGATATCCTACATCTATTAGGTAAGAAT
CATATTACAGTAGagtttccttaaATGTTTTTGTCTATTACTCATGGTAT
CATTGCATTCTTGACCTACATACAGCAGaatgatggcaaaaatgaagata
CAATAGAAGCAGATGATCCCTTGGATGAAAATGATAATCCTGACGGTCAA
TATCTCAATGTCAAACGAAACGATGATAAAGTtcaattaaaattaaatat
ttcttgGCAGCCCAATGGTTCAAACGAATACATTTCAATCAAACGATATA
TTGACGCAAATTACCACAATGCAGAAACAGTGTTTCAGAATGCATTAAAA
GATGAAATATTTACTTATATTGTTGAGAATACTAAAGATGATAAGAAAGA
TCCTGATTTGATAAAGGCTGTGCGACAAATGATAAATACTCCTGAAAAGG
TCCCATTCTACAAactatatcaaaacaaactgaaTAAATATGCCATCAAA
GCCAAGCTAGACAGAGGTGATGACCCTCTAGCGCAGGATGAAAAGCTTGG
TGAAACATTTTTGCATTTATTGTGTGGTGGAAAAAGAAGGGATAGGCAAA
TTATGAGAGATATTGTGACGATGATTTGCGAGAAAGCGCCTTACATTAAG
ACCAAAAGGTCCAAAAAAGGCAAGACCCCATACCAGCTGGCTAAAATGAC
ACATAAAAACGATATCCTACATCTATTAGGTAAGAATCATATTACAGTAG
agtttccttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011900XLOC_011900Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021263-proteinTCONS_00021263-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021263-exon-sc0000380-1491911889:256657..256932TCONS_00021263-exon-sc0000380-1491911889:256657..256932Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1510915933:256657..256932TCONS_00021263-exon-sc0000380-1510915933:256657..256932Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1575043694:256657..256932TCONS_00021263-exon-sc0000380-1575043694:256657..256932Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1491911889:266302..266355TCONS_00021263-exon-sc0000380-1491911889:266302..266355Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1510915933:266302..266355TCONS_00021263-exon-sc0000380-1510915933:266302..266355Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1575043694:266302..266355TCONS_00021263-exon-sc0000380-1575043694:266302..266355Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1491911889:266709..267298TCONS_00021263-exon-sc0000380-1491911889:266709..267298Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1510915933:266709..267298TCONS_00021263-exon-sc0000380-1510915933:266709..267298Clytia hemisphaericaexon
TCONS_00021263-exon-sc0000380-1575043694:266709..267298TCONS_00021263-exon-sc0000380-1575043694:266709..267298Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000380supercontigsc0000380:256657..267298 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.59675 1.4111 0.67797 0.221096 5.31597 2.8714 5.19633 4.08398 2.73315 2.60419 2.98267 1.89423 2.45575 1.72319 1.44503 1.91562 1.61072 1.11342 2.54607 1.38764 1.54383 1.41192 1.8308 1.87252 1.66078 2.86879 0.821047 1.16832 0.443066 0.338561
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021263 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top