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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018932 ID=TCONS_00018932|Name=TCONS_00018932|organism=Clytia hemisphaerica|type=transcript|length=2411bp
GGATACTATTCATCTACTCTTGTTTATTATACGAAAGAGTAATATGTTTT
TGCCTTCCTTTGTCAATTTTCTTTACCTGGTACTCATTCTTTCTCATTTC
TTGTTTTTTAGTGTAGGtacataaaaaagaacaaaatgtcTTTGGCGGAT
GAATTATTAGCAGATCTTGATGACATTGAGGATGAAGAGGTTACAGCCAA
TGTTGAGGATGATGGTGATATCCAGGAGATTATGGAGACAGATGATCTCC
AACAACAACAAGACAACTCTAAGTCTGTCAGTCACATTGCACGTCTGCGG
GACAGCAATGAGTTCAAAGAGACTTTAGAGAAAATGAATTATTACTTAGA
GAATCCCAGGAGCCGAGACACTGTGATGGGTCCTGTTGAGGAAGACCCTG
AATACAAATTGATTGTAACGGCGAATAATTTGACAGcggaaatcgaaaat
gaaacaagTATCATTAATAAATATTGTAGGGATAACTATTCCAAACGATT
CCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAGAATACATACAGACAG
TCCAAGCACTGGGTAATGATTTAGATTCaaataaaattgacaatttAGAC
TTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGTTACAGCGGCAACCAC
ACAGGGCGAGCAAATCGGACAAAATGAACTGGATAATATCAACGAAgctt
gtcaaatgaatatggacttAGTAGatgctaaaatgaaaattttccaatat
GTAGAATCGAGAATGTCCTTTATTGCACCGAATGTGTCGGTAGTTATTGG
TGCTTCAACTGCAGCAAAACTTATGGGTATTGCTGGTGGCTTGACCAATT
TATCTAAAATGCCTTCTTGTAATATCATGCTGTTGGGATCTCAAAAGAAA
ACATTGTCCGGATTTTCGACAGCTTCTGCACAAGTGTTGCCACATACTGG
ATTCATTTACTACAGTGATATCGTTCAGGGTTTACCACCATATTTGCGAA
AGAAAGGAGCTCGACTGGCATCTGCTAAAGTAACATTAGCCGCTCGTATC
GATAGTTTTCACGAAAATCTTGATGGTTCTGCTGGTCGAAAACTCCTAGA
AGAAATCGAGAAGAAATTTGATAAGCTTCAAGAACCGCCCCCAGTCAAGG
ACGCCAAAGCTTTACCACGCCCAGATGACGCCCCACGCCAGAAGCGAGGT
GGAAAACGGGTCCGCAAGATGAAAGAAAAGTTTGCGATTACGGAAATGAG
GCGACAAGCTAGTCGCGTGACGTTTGGAGAAATTTCTGAAGATGTTTATC
AGCAGCATGTTGGATTTGGGATCGGCTCCTTGGCTAAGGAAAGTGCTTCG
GGTAAAATCAGGAACCCTAATGTTGATAAGAAGACGCAAGTTTCGATTTC
CAAACGTTTACAGAGAAATTTGGCGAATATGAACCAATCGTATGGTGGTA
AATCAACAGTGCGTGGTCAAGTCTCCGGTACTGCGTCCAGTGTGGCCTTC
ACACCTTTGCAAGGTATCGAAATTGTCAACCCGAAAGCTGCAGAAAAACG
TGTCCAAGAAGCTAATGCTAAATACTTTTCAAATCAAACGGGATTTTTTC
GTGTTAAGAAGAAAGATCAAACGAATGGTGAAAGTGCGACAAAAAGTTCA
GCTTCTTCGTCCTCAGTGACTTTTGCTAAACCAGCACCACTCAATAAATA
GTTATCATATTTCCGACGGAAATTTACTAAACAGTTGTTTGACTCTTCCA
GAAAAGGTTGGAGAAAAGGTGTCCCGGATGACTACTTAGAGAAAATTGGT
TATATATGACGTGCATCTTGTTAGGGTCCTCTTTTCAAACTCTATAATAA
CTAAACATGGTTGCAAAATCAACAAATTAAGAAAAGATATTTTAggtaat
tttttaaacatttttcacTTTAGGTTTTTCTCACTCAGGGACCAGATTTT
GTCTGTTAGGGTCAGATAGGATTCAAATTTATCTCAACTCCAGCGGCACC
CACTTCCCTGTGGATAACTGATCATTTTCTAGGTACCTGTCGGAAACACT
GTTTGTGGTAAAGGGTTATTTCTAAAATAACCTTTTAAAATCATCATCAT
TAAGTTAAGTTTCCAACCTCACATTTTAAAGGGACCCATGCTAGTCTAAA
TGGATAATATTATTGCTCTTAGCGCATTTGGATAATAATTTTAGGTCTTC
ACAatggttttttgttttttacttcCGAGACTTGCTGACTGGCTTGTTTT
ACCTCTAATGTACCTTTTATGGATTTTTATCTATAGTGTAATGTATTTTA
CAATTGCTTAGTTCTTCAAAGATTTCGTTTTTGAAGCTTGATTTTTTTAA
CTGTAAGTACGATGTCTTTATCACGAGAAAGCAAAGTTATAAAATCCCGA
ATTCATTAAAT Run BLAST on NCBI protein sequence of TCONS_00018932-protein >TCONS_00018932-protein ID=TCONS_00018932-protein|Name=TCONS_00018932-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MSLADELLADLDDIEDEEVTANVEDDGDIQEIMETDDLQQQQDNSKSVSH
IARLRDSNEFKETLEKMNYYLENPRSRDTVMGPVEEDPEYKLIVTANNLT
AEIENETSIINKYCRDNYSKRFPELDSLVTNALEYIQTVQALGNDLDSNK
IDNLDFLPPATRMVVSVTAATTQGEQIGQNELDNINEACQMNMDLVDAKM
KIFQYVESRMSFIAPNVSVVIGASTAAKLMGIAGGLTNLSKMPSCNIMLL
GSQKKTLSGFSTASAQVLPHTGFIYYSDIVQGLPPYLRKKGARLASAKVT
LAARIDSFHENLDGSAGRKLLEEIEKKFDKLQEPPPVKDAKALPRPDDAP
RQKRGGKRVRKMKEKFAITEMRRQASRVTFGEISEDVYQQHVGFGIGSLA
KESASGKIRNPNVDKKTQVSISKRLQRNLANMNQSYGGKSTVRGQVSGTA
SSVAFTPLQGIEIVNPKAAEKRVQEANAKYFSNQTGFFRVKKKDQTNGES
ATKSSASSSSVTFAKPAPLNK Run BLAST on NCBI transcript from alignment at sc0000313:51816..54992- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018932 ID=TCONS_00018932|Name=TCONS_00018932|organism=Clytia hemisphaerica|type=transcript|length=3177bp|location=Sequence derived from alignment at sc0000313:51816..54992- (Clytia hemisphaerica)
GGATACTATTCATCTACTCTTGTTTATTATACGAAAGAGTAATATGTTTT
TGCCTTCCTTTGTCAATTTTCTTTACCTGGTACTCATTCTTTCTCATTTC
TTGTTTTTTAGTGTAGGTACATAAAAAAGAACAAAATGTCTTTGGCGGAT
GAATTATTAGCAGATCTTGATGACATTGAGGATGAAGAGGTTACAGCCAA
TGTTGAGGATGATGGTGATATCCAGGAGATTATGGAGACAGATGATCTCC
AACAACAACAAGACAACTCTAAGTCTGTCAGTCACATTGCACGTCTGCGG
GACAGCAATGAGTTCAAAGAGACTTTAGAGAAAATGAATTATTACTTAGA
GAATCCCAGGAGCCGAGACACTGTGATGGGTCCTGTTGAGGAAGACCCTG
AATACAAATTGATTGTAACGGCGAATAATTTGACAGCGGAAATCGAAAAT
GAAACAAGTATCATTAATAAATATTGTAGGGATAACTATTCCAAACGATT
CCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAGAATACATACAGACAG
TCCAAGCACTGGGTAATGATTTAGATTCAAATAAAATTGACAATTTAGAC
TTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGTTACAGCGGCAACCAC
ACAGGGCGAGCAAATCGGACAAAATGAACTGGATAATATCAACGAAGCTT
GTCAAATGAATATGGACTTAGTAGATGCTAAAATGAAAATTTTCCAATAT
GTAGAATCGAGAATGTCCTTTATTGCACCGAATGTGTCGGTAGTTATTGG
TGCTTCAACTGCAGCAAAACTTATGGGTATTGCTGGTGGCTTGACCAATT
TATCTAAAATGCCTTCTTGTAATATCATGCTGTTGGGATCTCAAAAGAAA
ACATTGTCCGGATTTTCGACAGCTTCTGCACAAGTGTTGCCACATACTGG
ATTCATTTACTACAGTGATATCGTTCAGGTAATATCGATATTATTGCACC
GAATTTTCTCTTGTTTTTTACTTTTGTCAACTTTCAGTTTTAACTCTTTT
CCACACTCAGGAGATTTGAGGAGTTTTACATTTTCTGGAATAAATGATAT
CTGGTTTTGTTTCTCTTTAGTGATTTTCGATGGGGAAATTTTTTTAATTT
GTTAGAGATACGATATATACGATACTTCTCAGGAAGACGTAAGTGGCAAG
AAATAAAGTAATACTCTCTGTGTTTAAACTTCTTCCGTCTCATACGGATT
TCCGTCTGTAGTGAATTAAATAAAGAGGGATTTCCGTCTCAGACCACTGA
CTAGTGTTGTAATAAAAGGGATGACTTTTCTTCCTATCAGGGTTTACCAC
CATATTTGCGAAAGAAAGGAGCTCGACTGGCATCTGCTAAAGTAACATTA
GCCGCTCGTATCGATAGTTTTCACGAAAATCTTGATGGTTCTGCTGGTCG
AAAACTCCTAGAAGAAATCGAGAAGAAATTTGATAAGCTTCAAGAACCGC
CCCCAGTCAAGGACGCCAAAGCTTTACCACGCCCAGATGACGCCCCACGC
CAGAAGCGAGGTGGAAAACGGGTCCGCAAGATGAAAGAAAAGTTTGCGAT
TACGGAAATGAGGCGACAAGCTAGTCGCGTGACGTTTGGAGAAATTTCTG
AAGATGTTTATCAGCAGCATGTTGGATTTGGGATCGGCTCCTTGGCTAAG
GAAAGTGCTTCGGGTAAAATCAGGAACCCTAATGTTGATAAGAAGACGCA
AGTTTCGATTTCCAAACGTTTACAGGTATGGATACTTCTTGTCATTATAA
ATGAGTGTTGCAATTTTCCCGTCTGTAGGCGGAAATGCGTTCAGCTGAGA
TTTTTCACTTTAGTCTTCTATAAACCTTGGAAGAGCGAAATTCTTAAATG
GTGATTGCAACACTGATAAATGACTGTTGCATTTACAGTAAAATTTAACA
GTGTTCGAATTTCTTCCGATCACAGACAGATTTGCCCCTCAGTGAAGCAC
ATTCCGCTAAAAAATTCGATTTAAAAAGATCTCATAACAAAAACTTGTGT
TTTTTGGTTTTATGTATGCTACAAATAAAACAAAACGGTATTTTTATGCG
AAAAAGGATACGAGGGGAGGGTTCTCATTAATACTTAACATTAATTGTCA
CTGATTTTTCTTCTTCTTTCACATAACAGAGAAATTTGGCGAATATGAAC
CAATCGTATGGTGGTAAATCAACAGTGCGTGGTCAAGTCTCCGGTACTGC
GTCCAGTGTGGCCTTCACACCTTTGCAAGGTATCGAAATTGTCAACCCGA
AAGCTGCAGAAAAACGTGTCCAAGAAGCTAATGCTAAATACTTTTCAAAT
CAAACGGGATTTTTTCGTGTTAAGAAGAAAGATCAAACGAATGGTGAAAG
TGCGACAAAAAGTTCAGCTTCTTCGTCCTCAGTGACTTTTGCTAAACCAG
CACCACTCAATAAATAGTTATCATATTTCCGACGGAAATTTACTAAACAG
TTGTTTGACTCTTCCAGAAAAGGTTGGAGAAAAGGTGTCCCGGATGACTA
CTTAGAGAAAATTGGTTATATATGACGTGCATCTTGTTAGGGTCCTCTTT
TCAAACTCTATAATAACTAAACATGGTTGCAAAATCAACAAATTAAGAAA
AGATATTTTAGGTAATTTTTTAAACATTTTTCACTTTAGGTTTTTCTCAC
TCAGGGACCAGATTTTGTCTGTTAGGGTCAGATAGGATTCAAATTTATCT
CAACTCCAGCGGCACCCACTTCCCTGTGGATAACTGATCATTTTCTAGGT
ACCTGTCGGAAACACTGTTTGTGGTAAAGGGTTATTTCTAAAATAACCTT
TTAAAATCATCATCATTAAGTTAAGTTTCCAACCTCACATTTTAAAGGGA
CCCATGCTAGTCTAAATGGATAATATTATTGCTCTTAGCGCATTTGGATA
ATAATTTTAGGTCTTCACAATGGTTTTTTGTTTTTTACTTCCGAGACTTG
CTGACTGGCTTGTTTTACCTCTAATGTACCTTTTATGGATTTTTATCTAT
AGTGTAATGTATTTTACAATTGCTTAGTTCTTCAAAGATTTCGTTTTTGA
AGCTTGATTTTTTTAACTGTAAGTACGATGTCTTTATCACGAGAAAGCAA
AGTTATAAAATCCCGAATTCATTAAAT Coding sequence (CDS) from alignment at sc0000313:51816..54992- >TCONS_00018932 ID=TCONS_00018932|Name=TCONS_00018932|organism=Clytia hemisphaerica|type=CDS|length=4698bp|location=Sequence derived from alignment at sc0000313:51816..54992- (Clytia hemisphaerica)
AGAAATTTGGCGAATATGAACCAATCGTATGGTGGTAAATCAACAGTGCG
TGGTCAAGTCTCCGGTACTGCGTCCAGTGTGGCCTTCACACCTTTGCAAG
GTATCGAAATTGTCAACCCGAAAGCTGCAGAAAAACGTGTCCAAGAAGCT
AATGCTAAATACTTTTCAAATCAAACGGGATTTTTTCGTGTTAAGAAGAA
AGATCAAACGAATGGTGAAAGTGCGACAAAAAGTTCAGCTTCTTCGTCCT
CAGTGACTTTTGCTAAACCAGCACCACTCAATAAATAGGGTTTACCACCA
TATTTGCGAAAGAAAGGAGCTCGACTGGCATCTGCTAAAGTAACATTAGC
CGCTCGTATCGATAGTTTTCACGAAAATCTTGATGGTTCTGCTGGTCGAA
AACTCCTAGAAGAAATCGAGAAGAAATTTGATAAGCTTCAAGAACCGCCC
CCAGTCAAGGACGCCAAAGCTTTACCACGCCCAGATGACGCCCCACGCCA
GAAGCGAGGTGGAAAACGGGTCCGCAAGATGAAAGAAAAGTTTGCGATTA
CGGAAATGAGGCGACAAGCTAGTCGCGTGACGTTTGGAGAAATTTCTGAA
GATGTTTATCAGCAGCATGTTGGATTTGGGATCGGCTCCTTGGCTAAGGA
AAGTGCTTCGGGTAAAATCAGGAACCCTAATGTTGATAAGAAGACGCAAG
TTTCGATTTCCAAACGTTTACAGATGTCTTTGGCGGATGAATTATTAGCA
GATCTTGATGACATTGAGGATGAAGAGGTTACAGCCAATGTTGAGGATGA
TGGTGATATCCAGGAGATTATGGAGACAGATGATCTCCAACAACAACAAG
ACAACTCTAAGTCTGTCAGTCACATTGCACGTCTGCGGGACAGCAATGAG
TTCAAAGAGACTTTAGAGAAAATGAATTATTACTTAGAGAATCCCAGGAG
CCGAGACACTGTGATGGGTCCTGTTGAGGAAGACCCTGAATACAAATTGA
TTGTAACGGCGAATAATTTGACAGCGGAAATCGAAAATGAAACAAGTATC
ATTAATAAATATTGTAGGGATAACTATTCCAAACGATTCCCAGAGTTGGA
TTCTCTTGTCACAAATGCCTTAGAATACATACAGACAGTCCAAGCACTGG
GTAATGATTTAGATTCAAATAAAATTGACAATTTAGACTTTTTACCGCCA
GCTACTCGTATGGTTGTCAGCGTTACAGCGGCAACCACACAGGGCGAGCA
AATCGGACAAAATGAACTGGATAATATCAACGAAGCTTGTCAAATGAATA
TGGACTTAGTAGATGCTAAAATGAAAATTTTCCAATATGTAGAATCGAGA
ATGTCCTTTATTGCACCGAATGTGTCGGTAGTTATTGGTGCTTCAACTGC
AGCAAAACTTATGGGTATTGCTGGTGGCTTGACCAATTTATCTAAAATGC
CTTCTTGTAATATCATGCTGTTGGGATCTCAAAAGAAAACATTGTCCGGA
TTTTCGACAGCTTCTGCACAAGTGTTGCCACATACTGGATTCATTTACTA
CAGTGATATCGTTCAGAGAAATTTGGCGAATATGAACCAATCGTATGGTG
GTAAATCAACAGTGCGTGGTCAAGTCTCCGGTACTGCGTCCAGTGTGGCC
TTCACACCTTTGCAAGGTATCGAAATTGTCAACCCGAAAGCTGCAGAAAA
ACGTGTCCAAGAAGCTAATGCTAAATACTTTTCAAATCAAACGGGATTTT
TTCGTGTTAAGAAGAAAGATCAAACGAATGGTGAAAGTGCGACAAAAAGT
TCAGCTTCTTCGTCCTCAGTGACTTTTGCTAAACCAGCACCACTCAATAA
ATAGGGTTTACCACCATATTTGCGAAAGAAAGGAGCTCGACTGGCATCTG
CTAAAGTAACATTAGCCGCTCGTATCGATAGTTTTCACGAAAATCTTGAT
GGTTCTGCTGGTCGAAAACTCCTAGAAGAAATCGAGAAGAAATTTGATAA
GCTTCAAGAACCGCCCCCAGTCAAGGACGCCAAAGCTTTACCACGCCCAG
ATGACGCCCCACGCCAGAAGCGAGGTGGAAAACGGGTCCGCAAGATGAAA
GAAAAGTTTGCGATTACGGAAATGAGGCGACAAGCTAGTCGCGTGACGTT
TGGAGAAATTTCTGAAGATGTTTATCAGCAGCATGTTGGATTTGGGATCG
GCTCCTTGGCTAAGGAAAGTGCTTCGGGTAAAATCAGGAACCCTAATGTT
GATAAGAAGACGCAAGTTTCGATTTCCAAACGTTTACAGATGTCTTTGGC
GGATGAATTATTAGCAGATCTTGATGACATTGAGGATGAAGAGGTTACAG
CCAATGTTGAGGATGATGGTGATATCCAGGAGATTATGGAGACAGATGAT
CTCCAACAACAACAAGACAACTCTAAGTCTGTCAGTCACATTGCACGTCT
GCGGGACAGCAATGAGTTCAAAGAGACTTTAGAGAAAATGAATTATTACT
TAGAGAATCCCAGGAGCCGAGACACTGTGATGGGTCCTGTTGAGGAAGAC
CCTGAATACAAATTGATTGTAACGGCGAATAATTTGACAGCGGAAATCGA
AAATGAAACAAGTATCATTAATAAATATTGTAGGGATAACTATTCCAAAC
GATTCCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAGAATACATACAG
ACAGTCCAAGCACTGGGTAATGATTTAGATTCAAATAAAATTGACAATTT
AGACTTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGTTACAGCGGCAA
CCACACAGGGCGAGCAAATCGGACAAAATGAACTGGATAATATCAACGAA
GCTTGTCAAATGAATATGGACTTAGTAGATGCTAAAATGAAAATTTTCCA
ATATGTAGAATCGAGAATGTCCTTTATTGCACCGAATGTGTCGGTAGTTA
TTGGTGCTTCAACTGCAGCAAAACTTATGGGTATTGCTGGTGGCTTGACC
AATTTATCTAAAATGCCTTCTTGTAATATCATGCTGTTGGGATCTCAAAA
GAAAACATTGTCCGGATTTTCGACAGCTTCTGCACAAGTGTTGCCACATA
CTGGATTCATTTACTACAGTGATATCGTTCAGAGAAATTTGGCGAATATG
AACCAATCGTATGGTGGTAAATCAACAGTGCGTGGTCAAGTCTCCGGTAC
TGCGTCCAGTGTGGCCTTCACACCTTTGCAAGGTATCGAAATTGTCAACC
CGAAAGCTGCAGAAAAACGTGTCCAAGAAGCTAATGCTAAATACTTTTCA
AATCAAACGGGATTTTTTCGTGTTAAGAAGAAAGATCAAACGAATGGTGA
AAGTGCGACAAAAAGTTCAGCTTCTTCGTCCTCAGTGACTTTTGCTAAAC
CAGCACCACTCAATAAATAGGGTTTACCACCATATTTGCGAAAGAAAGGA
GCTCGACTGGCATCTGCTAAAGTAACATTAGCCGCTCGTATCGATAGTTT
TCACGAAAATCTTGATGGTTCTGCTGGTCGAAAACTCCTAGAAGAAATCG
AGAAGAAATTTGATAAGCTTCAAGAACCGCCCCCAGTCAAGGACGCCAAA
GCTTTACCACGCCCAGATGACGCCCCACGCCAGAAGCGAGGTGGAAAACG
GGTCCGCAAGATGAAAGAAAAGTTTGCGATTACGGAAATGAGGCGACAAG
CTAGTCGCGTGACGTTTGGAGAAATTTCTGAAGATGTTTATCAGCAGCAT
GTTGGATTTGGGATCGGCTCCTTGGCTAAGGAAAGTGCTTCGGGTAAAAT
CAGGAACCCTAATGTTGATAAGAAGACGCAAGTTTCGATTTCCAAACGTT
TACAGATGTCTTTGGCGGATGAATTATTAGCAGATCTTGATGACATTGAG
GATGAAGAGGTTACAGCCAATGTTGAGGATGATGGTGATATCCAGGAGAT
TATGGAGACAGATGATCTCCAACAACAACAAGACAACTCTAAGTCTGTCA
GTCACATTGCACGTCTGCGGGACAGCAATGAGTTCAAAGAGACTTTAGAG
AAAATGAATTATTACTTAGAGAATCCCAGGAGCCGAGACACTGTGATGGG
TCCTGTTGAGGAAGACCCTGAATACAAATTGATTGTAACGGCGAATAATT
TGACAGCGGAAATCGAAAATGAAACAAGTATCATTAATAAATATTGTAGG
GATAACTATTCCAAACGATTCCCAGAGTTGGATTCTCTTGTCACAAATGC
CTTAGAATACATACAGACAGTCCAAGCACTGGGTAATGATTTAGATTCAA
ATAAAATTGACAATTTAGACTTTTTACCGCCAGCTACTCGTATGGTTGTC
AGCGTTACAGCGGCAACCACACAGGGCGAGCAAATCGGACAAAATGAACT
GGATAATATCAACGAAGCTTGTCAAATGAATATGGACTTAGTAGATGCTA
AAATGAAAATTTTCCAATATGTAGAATCGAGAATGTCCTTTATTGCACCG
AATGTGTCGGTAGTTATTGGTGCTTCAACTGCAGCAAAACTTATGGGTAT
TGCTGGTGGCTTGACCAATTTATCTAAAATGCCTTCTTGTAATATCATGC
TGTTGGGATCTCAAAAGAAAACATTGTCCGGATTTTCGACAGCTTCTGCA
CAAGTGTTGCCACATACTGGATTCATTTACTACAGTGATATCGTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018932-exon-sc0000313-1575043694:54015..54992 | TCONS_00018932-exon-sc0000313-1575043694:54015..54992 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1575043694:53218..53652 | TCONS_00018932-exon-sc0000313-1575043694:53218..53652 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1575043694:51816..52813 | TCONS_00018932-exon-sc0000313-1575043694:51816..52813 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1510915933:54015..54992 | TCONS_00018932-exon-sc0000313-1510915933:54015..54992 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1510915933:53218..53652 | TCONS_00018932-exon-sc0000313-1510915933:53218..53652 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1510915933:51816..52813 | TCONS_00018932-exon-sc0000313-1510915933:51816..52813 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1491911889:54015..54992 | TCONS_00018932-exon-sc0000313-1491911889:54015..54992 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1491911889:53218..53652 | TCONS_00018932-exon-sc0000313-1491911889:53218..53652 | Clytia hemisphaerica | exon |
| TCONS_00018932-exon-sc0000313-1491911889:51816..52813 | TCONS_00018932-exon-sc0000313-1491911889:51816..52813 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000313 | supercontig | sc0000313:51816..54992 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00018932 vs. Swiss-Prot (Human)
Match: PRP31 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens GN=PRPF31 PE=1 SV=2) HSP 1 Score: 531.561 bits (1368), Expect = 1.467e-180 Identity = 281/465 (60.43%), Postives = 354/465 (76.13%), Query Frame = 1
Query: 220 IQEIMETDDLQQQQDNSKSVSHIARLRDSNEFKETLEKMNYYLENPRSRDTVMGPVEEDPEYKLIVTANNLTAEIENETSIINKYCRDNYSKRFPELDSLVTNALEYIQTVQALGNDLDSNKI-DNLD-FLPPATRMVVSVTAATTQGEQIGQNELDNINEACQMNMDLVDAKMKIFQYVESRMSFIAPNVSVVIGASTAAKLMGIAGGLTNLSKMPSCNIMLLGSQKKTLSGFSTASAQVLPHTGFIYYSDIVQGLPPYLRKKGARLASAKVTLAARIDSFHENLDGSAGRKLLEEIEKKFDKLQEPPPVKDAKALPRPDDAPRQKRGGKRVRKMKEKFAITEMRRQASRVTFGEISEDVYQQHVGFGIGSLAKESASGKIRNPNVDKKTQVSISKRLQRNLANMNQSYGGKSTVRGQVSGTASSVAFTPLQGIEIVNPKAAEKRVQEANAKYFSNQTGFFRVK 1608
I+++ E L D SV IA+L DS F E + K+ Y+ VMGPVE PEY++IV ANNLT EIENE +II+K+ RD YSKRFPEL+SLV NAL+YI+TV+ LGN LD K +NL L AT MVVSVTA+TTQG+Q+ + EL+ + EAC M ++L +K +I++YVESRMSFIAPN+S++IGASTAAK+MG+AGGLTNLSKMP+CNIMLLG+Q+KTLSGFS+ S VLPHTG+IY+SDIVQ LPP LR+K ARL +AK TLAAR+DSFHE+ +G G +L +EIE+KFDK QEPPPVK K LP P D R+KRGG+R RKMKE+ +TE+R+QA+R++FGEI ED YQ+ +GF +G L K S SG++R V++ T+ ISK LQR L + YGGKST+R + SGTASSVAFTPLQG+EIVNP+AAEK+V EAN KYFS+ F +VK
Sbjct: 32 IEDVQEETQLDLSGD---SVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTS--VLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGK-SGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKVK 490
The following BLAST results are available for this feature:
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