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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016834 ID=TCONS_00016834|Name=TCONS_00016834|organism=Clytia hemisphaerica|type=transcript|length=853bp
CTGACAAGGAGTCAGAAAAGAATAGTTGGTTCTAATGATCATCCTGTGGA
ACtaatagaaaaataatatcaagaTGCCTCAATTAGGAAAGAGTGCCAAA
ATGTTGGTACACATCAACTACAGAATGAGATGTCATTTACAAGATGGTCG
ATTATTTATTGGTACATTCTTGGCTTTTGACAAACACATGAATCTTATTC
TTGGTGACTGTGATGAGTTCAGGAAGATCAAATCCAAGGGCGGCTCCGAA
AAGGGACGTGAGGAAAAACGTGCCCTTGGTCTTGTTTTACTAAGAGGAGA
ACATTTAGTTTCAATGACTGTTGAAGCTCCTCCATCAAAAGAGGACCGAA
ACAAAACACCAGCTGCTAAAGCCACCCCTGGCGCTGGTATGGGACGTGCA
GCTGGCCGAGGAATGCCCACACCAAGTATGGGAGCTGCACCTGCTGGTCT
GGCTGGTCCCGTTCGTGGAGTCGGTGGCCCATCACAACAAGCAATGGCTC
CACCACCACAACAGTATGGCCGAGGAGGGCCACCACCACCAGGAATGATG
GGAGGACCTCCACCCGGTATGAGACCTCCAGGAAACCCCAACTGGTAAAA
GAAAACAGCTATGAATTTGAACTGGTAAAACAAATGGATAATAATCAGCA
ATAACTGTTCCTTGTGTAAGATAACAATATTTTAAGGATATTTCATGGAG
CTGTTAGAGACATCAAAGGTGTTTTATTGCTAAATTATCAATATGAAAAA
GGACATTCATTTTTATGCATACTTTTTAACCAAAATAGTTACTCTTGGTA
AGAGAAAGAGAAGCTGCGCTTTTGTTTTGTATTTAGGTCGCGTGTCATGG
GAC Run BLAST on NCBI protein sequence of TCONS_00016834-protein >TCONS_00016834-protein ID=TCONS_00016834-protein|Name=TCONS_00016834-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
MPQLGKSAKMLVHINYRMRCHLQDGRLFIGTFLAFDKHMNLILGDCDEFR
KIKSKGGSEKGREEKRALGLVLLRGEHLVSMTVEAPPSKEDRNKTPAAKA
TPGAGMGRAAGRGMPTPSMGAAPAGLAGPVRGVGGPSQQAMAPPPQQYGR
GGPPPPGMMGGPPPGMRPPGNPNW Run BLAST on NCBI transcript from alignment at sc0000253:25554..38690+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016834 ID=TCONS_00016834|Name=TCONS_00016834|organism=Clytia hemisphaerica|type=transcript|length=13137bp|location=Sequence derived from alignment at sc0000253:25554..38690+ (Clytia hemisphaerica)
CTGACAAGGAGTCAGAAAAGAATAGTTGGTTCTAATGATCATCCTGTGTA
AGTCTCAAGGTTTGTTAGTTTGGAAATAGTATTTTTAACTGtgtgttttt
tcaattcaatctCATTGCTATTGGGTTTTTGAAGACTTTTTAAACAAATA
ATtttaggaccctgccgacgcaccggactgtacggtgtatttgtccggtg
gcaaaaagtatcctttcgctacaccggacgcaataagtctggtgttgcat
acagggaatttttgACGCCTGACATttacgaaacaaaaaattaagaaaca
ccggacgcaccggactggtcatgtcaggtgttttgattgtccggtggaaa
aaatatccttctccaacaccggacatccgacttccttaagtccggtgtag
agattgtccggtggtaaaaaaaattctcattttacaccggactttttTAC
ACCATACTAATTTTTAGGATGCAGACCTTTTtttcacgtgcgtttggttt
gggaacgcgaaacacgaacgcaaactacccatgtctaaacttttcaatat
atctccagaactaacagattttNAATGATCATCCTGTGTAAGTCTCAAGG
TTTGTTAGTTTGGAAATAGTATTTTTAACTGtgtgttttttcaattcaat
ctCATTGCTATTGGCTTTTTGAATACTTTTTAAACAAATAATtttaggac
cctgccgacgcaccggactgtacggtgtatttgtccggcggcaaaaagta
tcctttcgctacaccggacgcaataagtctggtgttgcatacagggaatt
tttgacgccggacatttacgaaacaaaaaattaagaaacaccggacgcac
tggactggtcatgtcaggtgttttgattgtcaggtggaaaaaatatcctt
ctccaacaccggacatccaacttccttaagtccggtgtagagattgtccg
gtggtaaaaaaaattctcattttacaccggactttttTACACCATACTAA
TTTTTAGGATGCAGACCTTTTTTTTTGCGACCTGCTTTGTTTTGATCTgc
cagtctaaacttaaactgctacatcaggattagaaactaggctagtctta
cctcttttatatttttttcagtcTGTGATCCTAAGGCCGATGGAATTTAA
TGTTATCTTTACCGTAAGCCGCCCGCGTGTTCAAAAACCTGCCGCatcaa
gttgtcattatttgccattttctcgaaaagttgtcattatttttcctcCC
ACTTGAgcagagaacaaaaattttcgaagttgatatcaaaacaaacggcc
cgtgGCTTTTTTAGATTGTTAACAACCCGAACGGCTCTCTAGTTGTCTTT
ACcgtgtgaatttaattttttcatattgtggagataacattatataattc
tctagcgggaagaaaaagatttatctcTTTAAGCTTGTACAAACAGGAAT
CAATagaatcaataaaaacacgAGAGTTCCGATTGTGTATctaaggaaaa
atgaaaaatctggtaaaaataaatgtttatgggaaaataatgaataatga
ataatgaaaacttggccggtaaacatatcattaatttccatcagcctaag
gcttaggttttttctcatcttcaatttactgaagaaagcaggaatttgat
gcaagagttagattgtgctgtaaaaaatcattgaataaaagaagaacttt
aaatctttattatttttattttgaagaattggtgcaaaaaagtgaaacat
ggaaaattttcattttttattggctTAATTGAaaggggatttggaaaact
ttctatgtttgtttttttgcacaattccCTGCTAGTTTTCAGAAggcaca
agtgttacgcgtaagccaaatcgcgtatcaCTGCTGTTCCCCTCAGGCAA
AATCGTCGATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCGTTTTAATTCGGCAAAGTTTAGTAAACTCGACCacgtatcaatgtttt
gatttttcaagcggggatttctgtagaatgataaaatatggcTTGGCTGG
AATCGACGCCATAACAGCAGTGGTATTacaaacaacctctaaattgccga
gtacaggagaaaaaaaatcgaaattcaaaatggcggccaagcccatgCTG
AACATTTCGCTAAATGCTCAGAGCGCGACGGCCCATTTTCCCTTTCCTTT
ATCTTTCACCTTACCTGTTTTTTctactttctgagacttagtttctcatt
tctgactgagttcatacctgtcaatcatttgtccatcaatttcgaccagt
ctagttttcgcaccgagtgggattcgaaccaccaccaaagaaagacctca
GTGCTacaaataaggaaatttcagttggccggtaTTTTTTTGAGCGCAAC
GAAAATAATTTGAGCAGGGGGTCTGGCAGAACACCATTAGAAAAGTCTGA
AATGACCTTTACATTGGCTAAACACCTGtattaattcaaaatctattCTT
CTTTTAATTGGAAACGTTATTAAGTATTTATCTAAGCCTCTAGTCTTtaa
attttaaccggacaaaatgaaagattgagcttcagaatggctggtagaaa
ctacgaaatgaccggtaattaccagtcaccggccgttatttgcagcactg
tacCTTCAGATTtcgaagccagcgctctatccgttgagccatcgccgcag
aGCAACAACctgcaattcataacatattataccgaactggcaaaataCGG
TTACTAgtaaccctgcggggcccaaggcgccaagtatgcacccggcacag
tgacaagccgttactagcaaccctgacccgaTACCCCCTGAATCACGGAA
TTACGGATAGGAAAAGTTATCGGGAAAAAAATTGCTcgttacatttcaaa
ataaaacgatttccaaaccaacctaaagtcagtgtctgccaactaaaaac
ttctctgcgttacgacttcagactttagattccaattcttgtataggctg
caactacactgccaaatggtctgtattacaaagacttccaaatgggtcca
taagttaagaaaatgagattatcatctagcacgggggttttgtttttaaa
aacaNataagttaagaaaatgagattatcatccagtatcatctagcacgg
gggttttgtttttaaaaacaaacttcaaaataaaattgttaatgaacttg
ttacttttatgtttgccgcaagaaggaagaaaaatttaatttgacccccg
gtttttctctctttttctagccatttcccgcgtgttagtgtaaacacaac
tttaatccggggaaatgaagcgttttcattggtctaaaatcatggatggt
cacgtgaccagaatttttatccaggaaaatgccgtggccgcaatgttttg
ctttagtgagattgaccattttgttgtttagatttgagcgggcaaaattt
ctgtacaaaccaaaatatggcttcgttggaatactggttgaaacacttgt
gaagGCGGCCCCGAGaagatttttgacttttgaaatgcTGCCCCTGAGAT
AGTGTTGTGCGCCGAAGGTGCAAAAAGGGCGCTGAAGTTGCAAAAAGGGG
TGAttttttaggggtattttataCAAAATTCATTATCTTTGTTTTGGTAC
CGCGATTGAGATGTTCATTAGTGTTGAGGGCGTTGTTATTTTTCAGGACG
GAAGGCCGCATTTTATTAAAAAGGGCGGTCGATTGGGCGTGAACTTATTA
ATTTCAGCCGTCataatattatcaaaatcattttcagaagaaaagatGGC
GGACGTTGGCGGTGGTTTGTAGATGCTGCCCTCTGCCTTGAAATCTTGCA
CTTTCTACCCTTGGTAAGAAGCATTTCTGCCCCTGCCCCTGCCGAAATCT
GCCAtgatcagggggggggtcaacatttataataccaacccatagcccaa
aaacctgacttttgaccttttgagctaagttaacaccaccaccccaaaat
tggtatctaCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNccggagcttgatttaaaaagagactca
tgtacaaactcacgaaattgaccaaaaccgagcgttagacttggaggagg
aggagaagaagaaattttaccgttttaacaaatatttcctatagatagga
aatatttaataaaaaaagaatgaacaaaaaatctagatcctgaagctcac
aatatctcgacaaagttgtatacttttttttggtgcacccggcataatgt
taacaaactttttcacGAAAGAAAGAAATATCAGTAGAAGAGCTTCCTCA
AAAGATGGAGCTGATGCTGATGCACCACCAAAATTAAGGGCATGTTATGT
ATACATAAGAGTCTTGCAaatttaaggggggggggacaggccatatttta
gaaaggcaaggcagcgtccgctggtggccaaaaagggcactttttccagt
gttttccactaaaaaggctgtttttaccaatattttagtaatttcaagag
gggcagcgtccgataaccaaacgcttaaagggcatgaaaaatggtgTGGG
GGAGTAAAACTTAAGTAAGGGGCACCTCAAAACCATCTTCAAGCTTTAAA
GTGGGATAAATTGATAAGGGGTGATTTGTGTTTTAAGGGGGGACTCAAAA
TCATGGATGAAACCATCCCAAGTATGAATCAAACCTCAGTTGCTTGTGCA
GCAACCagggtcaatgaccactataccaggCATCTTAGGAAatggtcgtg
gcttcttcacaaCTCAGGCATGgaaataagggatagaaagtgcatcgcaa
ttttttgataagcatgattttgtatcctaaaatggatcaattttcaattt
ttagcttgtaagtaatcAAAAAATGCATCGCAAATTGCAAAATGCGATac
gctaattcgatccctgcaactgcaaaattttattggtttctttGTGATGG
TATCCAATCAATTGATTGGTTATCTATTAGTCATTGATCAGAAAAAGATA
TCGAGTGGGAGAGTCATTTTTTTATAGAAGATTCAGCCTGATCGGCTGGG
TTTCGCTGTATCACTAGCCAGTAACTTTCCTGCCCACTTTGGTAATTTTC
AATGCACCCGTTTGATTTATGGAAAAACTGACTcagcagaaaaaaggaaa
acaaattaaaatgaaaacatagattcctTTATAAACAAATTGCCTGTTAG
CTGGAATCTTAATACATGTGCTCGATTTTTTGATGTGGCTTTTAGTAGTT
TTGATAGTTTgttaaagagtttttatggtaagttgattatgcgTGTTTCC
CTGGGTTTCCAAAGCTCAGAAGGTCTTAAACAAGGTGGACACAGACTGTT
TCAAAAATTCTGTTTCAAACATTCTGTATCAGACTTATCTACATATACCA
AGTtccataattttagaactttgtatggtGAGGTTATTTTTCTGTATAAA
CAAAAATATGGCTTTGTTGGAATGATATTTGACAAGTGTTTCAAAGTTGG
CAGAGACACAATGCCAATTATCTACTTGATACCTTAGCCTTTTCTGCTGC
CTGTTCTGATTAAAAGTTTCTGCGACATCCCTGaatataatttttcttct
taatGTTGTTCAATTTAGGCTCTAGACAAAGTTAAAACTTAAAATAATGA
CAGATGATAGCATCAGGAATGATCCTGATTATAAGGATTTTTACAACAGT
AGTAATAATGACCCAAATTCAGCAAGAGCGGCTGATTCAAAAGACTTAAc
tgtaaataaaattgaaagtatTGTTGAAAAACAATTTGCCTTGGAGTTGG
AATTCAAAGAGCAAGAGATACAAAAGATCGAGCAACGCATCAATCAAACA
AAATCTATGCTTGATCGGTTACGGGCATATGTTGCTGCAGGTTATTTTGG
ATCTGGTGGATTAGTTGTTCCAGGATCGAAGGCTATCACTAATGAaccaa
aacctaaaaaacaAAAGAGTACAGCAGATGGTTTGGATCCTGCTGCAACT
TCTTTGGTGTTGAAAAATATGGACAAAgagaaggaacctaaaaatgATGA
AAGTCAAGAACCAGAGATGGCTGATACCAATCAACCTGTGAGTGGAGAAA
CTGATAGTAGATTTTATGTATCCAAGAAACTGATCGTCGGGAATGTGTCC
AAATATTTACTTGCAGATAGTCGTAAGGAAAATGATCAATCAACGCATAA
ATGGATGGTCTATGTTAGAACCGAATCAGGAGACGacaaagaaatagaaa
aatacatcaaatgtgttcttttctttttacatcCAAGTTACATTCCAAAC
GATATTGTCACTGTCTCAAAACCACCTTTCCAAGTCACCAGGAGAGGTTG
GGGTGAATTTCCAGTTCGTGTTCAACTCCATTTCCGTGATGCTCGTAATA
AAAGGTTTGATGTGATTCACAACttaaaattagataaaacttaCACTGGA
CTACAAACACTTGGAGCTGAAACCATTGTAAATATTGAACTACACAAGCA
TGCAAATAATGAGAATCTGATTATTTCTAAAAGTTCAACACCTTCCCCTG
CACCTTCAACGCAAGAAATCGCCAGTGATAAAACAGAATCGCATAATGAA
CAAGACAAAGAAAACGTAATTTCTAAAGAAAACGTAATTTCTAAAGAAGA
TATTGAACAATTAAAGTTGTCTCTACCTTTACCTGTCATTGCCGACCTCA
AATCAAAACTACCAACTGCTGAATGTGCCTCCAGTTGTGTGAGCAGTGCA
AACCCTTCCAGGTGTAACTCTCCAGTATCGGAAATCTCTTTCTTTAGCAA
TTTGGTTCAATTAGAATCAGAAATTGATTGCAAAttatacagtttgatcc
aacaTGCCCCACTTATTGCAACTGATGGTGTGAAGAGTAAATTTTTTACT
TGCCAAAGTATTGAATTATATGAAAGTTGGCATTTTACAAAACGACGTGC
TTTTGAATGGTACAGAGCTTCACACTTACGTAAACTATATGCAAAAAATT
ATCAAGACATGACCAGGTGTCCTTCTACGAAAGAGATATTAGTTTGGTTG
CGACAATGTGGTTTCACACCACCAGAAAAGGACTTGAATGTTATTTTACG
CACTCTGTTGTGTTGTCGAAAATGTGGGAAGTGCCTTACAAGAGATCATA
ATAAAAATACTTATTGTAGTAATTGCAAAGATAAATTGTATGCACCAGAA
CCATTACCAGACTCATTGTCACCTTACACGTCTGTACTTTCTAACGTTCA
AATTAAAGAAGAGACTTTACAATGTCTTGAAAAAGCTGTCAAGCAAGAGG
AATCAGAATCAGATATTGATTTAGATATTGTTAAAGTTCCCTCTGTCTTA
ACAGTATCAAAACACTCGGATATTGAAGCCCCTAATGATATTTTACCTAC
ACTTGCAGAGACATGGGTTTCAAATGTTTTATATCAATTCGGTATCCAAA
TCAAACCTTATGTTCTTGGGAACACAAAAACACCAGTTGTACAAGCAATG
CTGCTGCGAGCTATGAAATTGTTCATGTGTCAGTTGTTGAGGAAAAGTAA
TATTGAAGCAAAAACAGAGAACACCAATACATTAGAACCAGCCTTGATCA
CTTTTCGTCAAGTTCATTCAGCCATCTTGAAAGagccactttttgatttt
ttgactgATGCCCATTTAGGGAAATTGTAATTTTATTACTATGACCATAA
GGGAAGGAATTTTCGGGGAAACAATGATTGAAGTACGGTGTCAACACCTA
AAAAATTAGAACTTTTGTAACATCTATAGAATTATCATAAACAATGTGTA
ACCAATACAGTTAATTCGTTAATTTTTTTAGATCAAAGACACCCTCAAAT
ATTTGTTAAATCCTCTGAAAATTCTTTTCTGTaaccttaaaaaataattt
tcatgagAATAATAGAATGTCATAATATGATTCGCTCGGTCTTGAAGCAA
TATGAATTTAAAATTATTCCTATATGCTATAATCGCATCACTCATCATAA
GTATTATGCATTTTTAAGAAGctctgaaattttgtacacatGTCATGGAT
gagattgaaaattatttttaagggTGACAAAgatgaattgtttttttttt
atctcctACATGGCTTGTAAATCAAATTTTGGAGCTAGTTGTTTTCCAGG
CGATGGTCTATTCTACCCTTCAACATCTTATTTCAAGATATTTATTGAAT
CTNATCCAAGTTACATTCCAAACGATATTGTCACTGTCTCAAAACCACCT
TTCCAAGTCACCAGGAGAGGTTGGGGTGAATTTCCAGTTCGTGTTCAACT
CCATTTCCGTGATGCTCGTAATAAAAGGTTTGATGTGATTCACAACttaa
aattagataaaacttaCACTGGACTACAAACACTTGGAGCTGAAACCATT
GTAAATATTGAACTACACAAGCATGCAAATAATGAGAATCTGATTATTTC
TAAAAGTTCAACACCTTCCCCTGCACCTTCAACGCAAGAAATCGCCAGTG
ATAAAACAGAATCGCATAATGAACAAGACAAAGAAAACGTAATTTCTAAA
GAAAACGTAATTTCTAAAGAAGATATTGAACAATTAAAGTTGTCTCTACC
TTTACCTGTCATTGCCGACCTCAAATCAAAACTACCAACTGCTGAATGTG
CCTCCAGTTGTGTGAGCAGTGCAAACCCTTCCAGGTGTAACTCTCCAGTA
TCGGAAATCTCTTTCTTTAGCAATTTGGTTCAATTAGAATCAGAAATTGA
TTGCAAAttatacagtttgatccaacaTGCCCCACTTATTGCAACTGATG
GTGTGAAGAGTAAATTTTTTACTTGCCAAAGTATTGAATTATATGAAAGT
TGGCATTTTACAAAACGACGTGCTTTTGAATGGTACAGAGCTTCACACTT
ACGTAAACTATATGCAAAAAATTATCAAGACATGACCAGGTGTCCTTCTA
CAAAAGAGATATTAGTTTGGTTGCGACAATGTGGTTTCACACCACCAGAA
AAGGACTTGAATGTTATTTTACGCACTCTGTTGTGTTGTCGAAAATGTGG
GAAGTGCCTTACAAGAGATCATAATAAAAATACTTATTGTAGTAATTGCA
AAGATAAATTGTATGCACCAGAACCATTACCAGACTCATTGTCACCTTAC
ACGTCTGTACTTTCTAACGTTCAAATCAAAGAAGAGACTTTACAATGTCT
TGAAAAAGCTGTCAAGCAAGAGGAATCAGAATCAGATATTGATTTAGATA
TTGTTACAGTTCCCTCTGTCTTAACAGTATCAAAACACTCGGATATTGAA
GCCTCTAATGATATTTTACCTACACTTGCAGAGACATGGGTTTCTAATGT
TTTGTATCAATTCGGTATCCAAATCAAACCTTATGTTCTTGGGAACACAA
AAACACCAGTTGTACAAGCAATGCTGCTGCGAGCTATGAAATTGTTCATG
TGTCAGTTGTTGAGGAAAAGTAATATTGAAGCAAAAACAGAGAACACCAA
TACATTAGAACCAGCCTTGATCACTTTTCGTCAAGTTCATTCAGCCATCT
TGAAAGagccactttttgattttttgactgATGCCCATTTAGGGAAATTG
TAATTTTATTACTATGACCATAAGGGAAGGAATTTTCGGGGAAACAATGA
TTGAAGTACGGTGTCAACCTAAAAAATTAGAACTTGGGTAACATCTATTG
ATTTATCATAAACAATGTGTAACCATTACAGTTTATTCGTTAATTTTTTT
AGATCAAAGACACCCTCAAATGTTTGTTAAATCCTGTGAAAATTCTTTTC
TGTaaccttaaaaaataattttcatgagAATAATAGAATGTCATAATATG
ATTCGCTCGGTCTTGAAGCAATATGAATTTAAAATTATTCCTATATGCTA
TAATCGCATCACTCATCATAAGTATTATGCATTTTTAAGAAGctctgaaa
ttttgtacacatGTCATGGATgagattgaaaattatttttaagggTGACA
AAGatgaattgttttttctttatctcCTACATGGCTTGTAAATCAAATTT
TGGAGCTAGTTGTTTCCCAGGCGATGGTCTATTCAACCCTTCGACATCTT
ATTTCAAGACTTGTCTGATATTTATTGAATCTGCTAGCTTCAGATATGTC
ATGTTGAAATACTGTACcgatttttatgtttatttatcTTTTCAGGGAAC
taatagaaaaataatatcaagaTGCCTCAATTAGGAAAGAGTGCCAAAAT
GTTGGTACACATCAACTACAGAATGAGATGTCATTTACAAGATGGTCGAT
TATTTATTGGTACATTCTTGGCTTTTGACAAACACATGAATCTTATTCTT
GGTGACTGTGATGAGTTCAGGAAGATCAAATCCAAGGGCGGCTCCGAAAA
GGGACGTGAGGAAAAACGTGCCCTTGGTCTTGTTTTACTAAGAGGAGAAC
ATTTAGTTTCAATGACTGTTGAAGCTCCTCCATCAAAAGAGGACCGAAAC
AAAACACCAGCTGCTAAAGCCACCCCTGGCGCTGGTATGGGACGTGCAGC
TGGCCGAGGAATGCCCACACCAAGTATGGGAGCTGCACCTGCTGGTCTGG
CTGGTCCCGTTCGTGGAGTCGGTGGCCCATCACAACAAGCAATGGCTCCA
CCACCACAACAGTATGGCCGAGGAGGGCCACCACCACCAGGAATGATGGG
AGGACCTCCACCCGGTATGAGACCTCCAGGAAACCCCAACTGGTAAAAGA
AAACAGCTATGAATTTGAACTGGTAAAACAAATGGATAATAATCAGCAAT
AACTGTTCCTTGTGTAAGATAACAATATTTTAAGGATATTTCATGGAGCT
GTTAGAGACATCAAAGGTGTTTTATTGCTAAATTATCAATATGAAAAAGG
ACATTCATTTTTATGCATACTTTTTAACCAAAATAGTTACTCTTGGTAAG
AGAAAGAGAAGCTGCGCTTTTGTTTTGTATTTAGGTCGCGTGTCATGAGA
CAAagtaaataattgtttttattttgatttataaCATTTTAACGACTTTG
TCTTTTTAATTTCTTCAGATTAGCCACTGCGTTATAATCTGAAATCCTTC
AAAATTCCTGATTATTTAAAGGTTGTATCATTTTCaccttttcaaaattc
atgtgcTTTATATTGCATTTTTCGGACATAATAAATCCCTAAAAAATGTT
GGCCGACTACTTTCAAACCTATGTTTTGGTTTTAAGGCCAGATTTCGTTA
TATGGAAGTACTCGATTTATTTTCTCTGATCCCTATTTTTAAGGAGCATA
AAATATTCTGCTTGTATACTTATTGATTTTCAGatgaatttaaaataaaa
agtaagatTAGAATCATTCAAGNAGCAATGGCTCCACCACCACAACAGTA
TGGCCGAGGAGGGCCACCACCACCAGGAATGATGGGAGGACCTCCACCCG
GTATGAGACCTCCAGGAAACCCCAACTGGTAAAAGAAAACAGCTATGAAT
TTGAACTGGTAAAACAAATGGATAATAATCAGCAATAACTGTTCCTTGTG
TAAGATAACAATATTTTAAGGATATTTCATGGAGCTGTTAGAGACatcaa
aggtattttattgctAAATTATCAATATGAAAAAGGACATTCATTTTTAT
GCATactttttaactaaaatagttACTCTTGGTAAGAGAAAGAGAAGCTG
CGCTTTTGTTTTGTATTTAGGTCGCGTGTCATGGGAC Coding sequence (CDS) from alignment at sc0000253:25554..38690+ >TCONS_00016834 ID=TCONS_00016834|Name=TCONS_00016834|organism=Clytia hemisphaerica|type=CDS|length=525bp|location=Sequence derived from alignment at sc0000253:25554..38690+ (Clytia hemisphaerica)
aTGCCTCAATTAGGAAAGAGTGCCAAAATGTTGGTACACATCAACTACAG
AATGAGATGTCATTTACAAGATGGTCGATTATTTATTGGTACATTCTTGG
CTTTTGACAAACACATGAATCTTATTCTTGGTGACTGTGATGAGTTCAGG
AAGATCAAATCCAAGGGCGGCTCCGAAAAGGGACGTGAGGAAAAACGTGC
CCTTGGTCTTGTTTTACTAAGAGGAGAACATTTAGTTTCAATGACTGTTG
AAGCTCCTCCATCAAAAGAGGACCGAAACAAAACACCAGCTGCTAAAGCC
ACCCCTGGCGCTGGTATGGGACGTGCAGCTGGCCGAGGAATGCCCACACC
AAGTATGGGAGCTGCACCTGCTGGTCTGGCTGGTCCCGTTCGTGGAGTCG
GTGGCCCATCACAACAAGCAATGGCTCCACCACCACAACAGTATGGCCGA
GGAGGGCCACCACCACCAGGAATGATGGGAGGACCTCCACCCGGTATGAG
ACCTCCAGGAAACCCCAACTGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016834-exon-sc0000253-1491911889:25554..25600 | TCONS_00016834-exon-sc0000253-1491911889:25554..25600 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1510915933:25554..25600 | TCONS_00016834-exon-sc0000253-1510915933:25554..25600 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1575043694:25554..25600 | TCONS_00016834-exon-sc0000253-1575043694:25554..25600 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1491911889:37149..37937 | TCONS_00016834-exon-sc0000253-1491911889:37149..37937 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1510915933:37149..37937 | TCONS_00016834-exon-sc0000253-1510915933:37149..37937 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1575043694:37149..37937 | TCONS_00016834-exon-sc0000253-1575043694:37149..37937 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1491911889:38674..38690 | TCONS_00016834-exon-sc0000253-1491911889:38674..38690 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1510915933:38674..38690 | TCONS_00016834-exon-sc0000253-1510915933:38674..38690 | Clytia hemisphaerica | exon |
| TCONS_00016834-exon-sc0000253-1575043694:38674..38690 | TCONS_00016834-exon-sc0000253-1575043694:38674..38690 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253 | supercontig | sc0000253:25554..38690 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00016834 vs. Swiss-Prot (Human)
Match: RSMB (Small nuclear ribonucleoprotein-associated proteins B and B' OS=Homo sapiens GN=SNRPB PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 2.462e-44 Identity = 89/135 (65.93%), Postives = 96/135 (71.11%), Query Frame = 2
Query: 83 LGKSAKMLVHINYRMRCHLQDGRLFIGTFLAFDKHMNLILGDCDEFRKIKSKGGSEKGREEKRALGLVLLRGEHLVSMTVEAPPSKED---RNKTPAAKXXXXXXXXXXXXXXXXXPSMGAAPAGLAGPVRGVGG 478
+GKS+KML HI+YRMRC LQDGR+FIGTF AFDKHMNLIL DCDEFRKIK K + REEKR LGLVLLRGE+LVSMTVE PP K+ R A PG G G P M APAGLAGPVRGVGG
Sbjct: 3 VGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVP-MPQAPAGLAGPVRGVGG 136
The following BLAST results are available for this feature:
|
