TCONS_00016234 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00016234
Unique Name	TCONS_00016234
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2678

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000231:393312..400315-
coding sequence from alignment at sc0000231:393312..400315-

transcript sequence

>TCONS_00016234 ID=TCONS_00016234|Name=TCONS_00016234|organism=Clytia hemisphaerica|type=transcript|length=2678bp
cattAGTTAAGAAAAAGATGAAATCTTTTAACATTACTATAATACATtga
tgaaaatatgaaatgagTAATGGAAATGAACCAATTTAAGATCATCATTG
CTTAAACATTTTCCAGTAATCACCTCTATGATAGAGAAATGTCGGGCTGG
TTGTTAAAACAATTAGTACCAACGGATGAAAATCCCATAAGCCGTGATGT
TAAAGATGTTGTCGCGATGAATTTGAATGTTGACTGGAAGAAATTTGCAT
ACGGAATTATGTCAGATCAAGATATAGAAAGAATTGACCTTGACAATCGA
ACTGTATATGAGAAATGCTTTGAAATGTTGAACAAATGGACTGAATCGAA
CCCTCATGAGATAACAAATGCCATATTGAAACTGAAATTAAATGAAATGC
AGAGAAGAGACATTCTAATGGACATTGCCGACAAGGTTCCATCTTTTGGG
AGAGTGAAATTTCCAGACGAGCCTACCAGAAGTTATGAGGAGCCGAGACA
ACcacaacaaccacaacaaccGCAACAACCGCAGCAGCCAGCAAGGCAAG
AGAACCTTTATGAGAGAGATGGAGGTAATAAAGAGTTTTACGTGACTGAT
CTGTCCTTAAGAGACACCGATGAACTGGCAACCAAGCTAGATGTCACTTA
CGGTGCTGGTATATCAAACTGGAAGAATGTTGCTCACGAACTAATCGGCC
GAGATTCAGAGCTattttatcaaatcaaagaCTTAGACCTGCATTATTAT
GGAGGGGGGAATCCAgcattggaattttttaaacagTTAGCTATGAAAGA
ACCTGATGTCACTATCCGGCAATTCCAAAGTATTTGTAAAGAATTTCAGA
GAATGGATATGTCGCTTTACATCGATCAAAAATTAAGTAATAATCTGGAC
GGGTTTGTACGAGATTTGCAGAGTCAGCACAAAGAACGACTAGCGAGTTA
CATGAATTTAAATATACCAGGTGTTTATGACTGGGAAATGTTTGCTGACG
AATACGGTTTCAATAGACAACAAATTAATTTGATGCGAGCAGCTCTTAAA
GAAGGTGGCAGTTTTAGTCCGACCAAAAAATTGGTTGAATTGTTACAACA
ATCAAGACCCTTAACAACTCTTGAAGAGATCAAAAGAGCATGCGCTAAAC
TGGGTCGGAATGATGTCGTCCTTGTATTGAATAAAGCGATTGagaaaaag
aaacaaaggaTGACGTAATGTTTGTTCGATTTGCTTTAGTTAGAGGAGAT
TACTACGGGGTAGCGAGCACTCGCCAACGGAAAAGGATTATCTTCCCATA
GGTAAGACACTTGAACCTCCACTGTTAGAGACCACCTTATCAACGGTTAC
CTTTAACTGCGAAGAGTTTCAAAGCGTGCTAACTGCAAATGAGTatgaat
aattttgatttttcattgtCAAACCATGCGATACTTAACATTAGATTTTG
ACCATTATAAACTTCTATATCTTTTCTGTTACACATTTATGCACAATCAG
CCTTTTGGTAACCTATCGTACATTAAAAGACTGTTGTACTGCAAGAAATT
GCTTAAGTTTTGCTTAGGTTTTACTTTCGAAGAGGGCCATTTAAAgcgtg
tccgaaaaaaaaagagGAACAGATTTATGTATTATAAGTATTTATCTtta
tatataaagtaaaatctttatgtaatagttatcggacagttgcgagtaca
atatgagaaatattttacgagttcccagattttccgtacaatattttccg
agcctttaggcgaggaaaatatacggaaaatccggaacgaataaaatatt
tctcatattgtacgagcgtcaatttatatttaatttaatatttaaaggtt
ttgtttttaaataagagttgTTTACTCatcaagctttttcacattggatt
gacagggatgtggagcaagattggtcagaaaaaggaaaagaaactgCTTA
TaccagcataatataacaataggcagaNggttttgtttttaaataagagt
gatatcatttgcttactcatcaagctttttcacattggattgacagggat
gtggagcaagattggtcagaaaaaggaaaagaaactgCTTATaccagcat
aatataacaataggcagagactttcctgatatgaaatatgtttctgatat
gaaacgggaacacttatataaaaataaaacctttaatcaaATATCTACTG
ATTGAACgaaacaaaatttcattttattatgATAAATTCAAACTTCAATG
ATTTTgataactgttttttttttttgttccacATTTTTCCGGACACAACT
CatagaaaaacatcaaaaagcttacattctttttataagcatttcaCTTA
TATGCATCGCACTTTTGTGTATATCTAGGCTCAGAAATTCAAGCTTATGT
GAAGCATTTACCCGAGcctaaatttttcgattttggctattttttgctgg
aattttagggattttttcgaattttcctaAGATTTTGCTTAATATTTAAA
CATCCTTCTAGCATTTTTTAGCCTTGTCCGGCTCTCGATATAATGTATGC
TTTAAAAATAGCATGTAGACTTTTTTAATTATATCACatcttcttaatat
ttttgttcCGTATAATTGTAAgcaattataaagaaaaaagtgtaaaattt
gaaaaaagggtTAATAATAAAAGAGGGg

Run BLAST on NCBI

protein sequence of TCONS_00016234-protein

>TCONS_00016234-protein ID=TCONS_00016234-protein|Name=TCONS_00016234-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MSGWLLKQLVPTDENPISRDVKDVVAMNLNVDWKKFAYGIMSDQDIERID
LDNRTVYEKCFEMLNKWTESNPHEITNAILKLKLNEMQRRDILMDIADKV
PSFGRVKFPDEPTRSYEEPRQPQQPQQPQQPQQPARQENLYERDGGNKEF
YVTDLSLRDTDELATKLDVTYGAGISNWKNVAHELIGRDSELFYQIKDLD
LHYYGGGNPALEFFKQLAMKEPDVTIRQFQSICKEFQRMDMSLYIDQKLS
NNLDGFVRDLQSQHKERLASYMNLNIPGVYDWEMFADEYGFNRQQINLMR
AALKEGGSFSPTKKLVELLQQSRPLTTLEEIKRACAKLGRNDVVLVLNKA
IEKKKQRMT

Run BLAST on NCBI

transcript from alignment at sc0000231:393312..400315-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00016234 ID=TCONS_00016234|Name=TCONS_00016234|organism=Clytia hemisphaerica|type=transcript|length=7004bp|location=Sequence derived from alignment at sc0000231:393312..400315- (Clytia hemisphaerica)
CATTAGTTAAGAAAAAGATGAAATCTTTTAACATTACTATAATACATTGA
TGAAAATATGAAATGAGTAATGGAAATGAACCAATTTAAGATCATCATTG
CTTAAACATTTTCCAGTAATCACCTCTATGATAGAGAAATGTCGGGTATG
TATTCTTGATATAGTGTAACTTATGAAATTATGCAGTTCTTGCCCAAAAC
ATCTCCTTTCTATCGCTTTCAAGAGTTTTGAGATATTCTGCGTGTAAATT
CCTCTGAATCAATTTCTACTTTTTTTTCCGAAATAAAGATCTTCAATCAA
GTCAAGCTATTATCTTTTAGCAAGAAAAGAAGTTCTCATAACCCGGCAAG
AACCTATTAGACCCAGAGAAGGGGGTTGGACCCAGAGAAGTGGGTCAGTA
CTAAAATCTCAGACTTATATAATGAAGACTAAAAGAGCAAGTTTCCCTTT
TAAACCAACGTTTTGATATTTTATTATCAAATGATACTAAAATACTTGCA
AGACTAATTCACCACGTGACTAAACGTCATGATATCTGAGATTTTAGTAC
TGACTCTACTCCCCTGTTTAACATAATAAAATGAGAAATATCTACATGAT
TCTCTGGTAATATCTAATTCATATTTTTTTTACTGTTTAAAGGCTGGTTG
TTAAAACAATTAGTACCAACGGATGAAAATCCCATAAGCCGTGATGTTAA
AGATGTTGTCGCGATGAATTTGAATGTTGACTGGAAGAAATTTGCATACG
GAATTATGTCAGATCAAGATATAGAAAGAATTGACCTTGACAATCGAACT
GTATATGAGAAATGCTTTGAAATGTTGAACAAATGGACTGAATCGAACCC
TCATGAGATAACAAATGCCATATTGAAACTGAAATTAAATGAAATGCAGA
GAAGAGACATTCTAATGGACATTGCCGACAGTAAGTGATATTATTGAGTT
TAAAGCCCTGAAAAGGACTAGAGATGAATCTTCAACCTTTTTCAAGCATG
AAAAAGTGAAACCTTAAGATTTGCGTCGCATTTCGAAATTTTGTTTGAAA
AACACACGGGTCACGTGTTCAGGCTAGGAAGTAAGTATCTTCGTCTCCCA
AACTCACATATCACAATCAATCCGCAATGGGGAAAACTCTCTAAAAAGAG
AGTACACGTTTTTTTTAAGAAACTAGTTTTACCAAGTAGCCTCAACGTTT
CTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAA
CTTTTTGACACAATCAGCCTATTTTTCATGCAAAAAAAAATTGTTTTGAT
TGGAAGGTTCTTAAAAACAACCGAATTAAAAAATGTCATTTTCTCATTCT
CAGCCTCAGCATGTTTCTTATTTTTTAGGCATTCTGAGCCTCGTGTTTCT
TAAAAGTGTGTTTCTTAAAAATAAAAAAAACGTGTAACGCCTCAATACCA
ACATCACATTTATTATTAACCACTCTTGTGTTTCGGATCTAGCTCCTTCA
GGGCTTTGAAATCAATGAGTAATACACTATTTACTCTACTGTTTTATTTT
GAATTTAAAGTCTGTGGATACTGTACACGTAAAAATTTATACACCGTTGG
AAAGATTTTTTTGGAGGCATATAATCTAAAAGATCAAAGATTTTTGAGAA
ATTGAAAATTGGAGATGAAAAAAGAAGATGGAAAAAATGAAGATAGACAG
TTTCAGTCAGACTTAAGAAATATAATATGGCTCCCAATGTTTGACAATAA
AGTTCTGCCCGTGAGGGAGTAGAAATGAGATTATTGCCAACCATTACAAT
CTGTCTAACATTGGCTTGCATTGACAGTTCAACGACATTGTAGTAACCAT
TTTCTCAAAGGACTATTTCCAAATTTTTCTTACAAATAGAAAGAACTATT
GCTACACTCTTGATATTAGTATTTATAATCTGATGTATACAGGATACAGG
ATACAGGACGAAGATACAGAATGTATACGGGTTTGATCCGCGAATACAAT
TTTGGACTAAGAAAAACTGTTGGAAATTTCGAATTTAGCGCTTTTCTCAC
TAAGATAGAAAACAAATGCGTTTTTTTTCTAAGATAGTGTGACCAGTGAA
ATAATGATATAATTCCATTTACTGTCTTATCAATTGTTTTTTTGGAGGTG
GGAAATTCATAGAAACCAAATTCAACTCGTATAGCTCAAACCATGCAATT
AATTTCAAAATTTGTATATGAGAAAAGAAATTATAACATGGGTATGACCC
TTCTTTCTCTGTGTGCAGGCTAAAATTATTGCTACAGATTTTTAGGCCTT
ACTCTTGAGTAGGAGTTTTACGCTCGAAACGAAGGAAGATATGACGTAGC
CTAAGATTGTCATATTATGTATGCTTCTTAGAATTTAATAGAGGAATGTT
TACATACCGTTGGTTAAAAAAATGTGATTATAATATTAGTTTTGTACTTG
TGTTATGTCAATGTATAATAAGTTTGAACATGCATACACGGATGCTCTAA
CTATTTTGTCAACTTTTTTAATTACTCATGACATTCGGCTTTTTCTGAGA
AATAGGAAAGTCAAAAATGAAATTCAATAATTCAAAGGAATCTATATGAT
GAAAAAAATGGTCGAAATACTTATCAATCATGGAATGTAGGCCTTTATGT
AGTGTTGTCTATTCCTTCATATTTTTTTTAAAAACCAAGTATAAGTTGTG
GTTTGTTGCTGTTTGTGTAAAGTGGTGCATTTTGTTGTTGTTTTGTTGTT
GGTGTTTACTTAGGATTTTGGTTTAATTAATGTTGTCTTTCGAAGAGTGC
TGTATGAAAAATAAAAGTTTTAGTTATAGAAAACTGTTAACTTCGTGGCT
TCACTTTTTTTCTGGCCATACATAAGGTATCATTCAGTAGCAAAAACACC
ATCAAATAAGAAATATACAAACACAACACAATAAACATAGACGGCCTAAG
ATCTTTTTATATCGTCCAATATATATAAGGTATCATTCCATACAGCACGC
TGATTTCTCACCATTTTAGAGGTTCCATCTTTTGGGAGAGTGAAATTTCC
AGACGAGCCTACCAGAAGTTATGAGGAGCCGAGACAACCACAACAACCAC
AACAACCGCAACAACCGCAGCAGCCAGCAAGGCAAGAGAACCTTTATGAG
AGAGATGGAGGTAATAAAGGTAAAATATAATGTGATATGGAAAATTGCAT
GTTAATTGCAAATATTAATTACATATTCTTAAGGAGCGATAGCCAAGTGG
TCAAAGGCGTCAGCGTTTCAAACTAGGGATTTGTGTTTTGTCGCCCCTTC
CAATGTTCCGTTCAGCTCATAGATAGCCGAGCCGGCTAGCCGTGGCCCCG
TGAAAACAATTGAATAACTTCTGAAAGTTATAGATTACTGGGCTATCCAC
GTTAAATATCGACTCTGTCTATCTATCTATGTCTCTATTTGTTTTATATA
ATGTTCTTTTCATATTTATTTATACTGTCGACCCCTCATTTAATGCAGAT
AATACCCGGGGGGTACTAGGTTTGCGAGGTGACGGGTATGTCCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGGGAG
ATAATGTTAGTTAGAGGTGTCTAAAAAGTTCAGGGGTAATTCTCAATCAA
TCTGTTCTATATCCGTTACTTTTTTCTTATTTAGTTATACAGTGACCTCC
CCCCTCTGAGATGACAATTTTGAAATTGACTAAAAAGTTCTGGAGTTATT
CAATCCATGATCAATCATTTTTAGAAATATATCTCAATCTAGTTTTTTGT
CAACATGATCCAATTTCTTTGCAAATTGTTGCATTTGTTTTTCTACTCGA
TTCTTTCCAGTATTAAGGTGTCATGGGCAACCCTGGAAAAAAATATCAGG
AGTTAAAATCAAAAAGATATGTTGTAAATTACCATCTATAAGTTTCCCAA
AGTTGACGTTGTTAACTACAGTACAAATACATTAGAACCATTTCCTTTTA
ATTAATGAACCCATTTTAATGTTGATTATTGTAAACAAGTTGTCTAGTCT
AATAGACTAATGAGTAGTTAAGCCATTATTAACATGAGATAATTTAAATT
CAATGCTTTTACAGGTCTTTTAACATAAAGATAAAGCTTACCGAAAAAAA
TTATCATGGGTCTTTTTTAAAGTAGTGTACTACGTTGCTTTTTACTTTCA
ATTTTATGTATGTTGAAAAACTTGAAATTTAGGAACATAATGTTGAAAAT
AGGCAGTAGAGACTTTGTCAAACATTTCAGCTGAAAGAATTGGAATGTTT
GTTGTGGAAGGGGGTTGAAGTTTGAATGTATGAAATTTTAGTTTTCTAAC
TTTATAAAATGACTGTTCCATAAACTACTGTGTTGTTTTCTTTGTTTCTT
TTTCATAAGAGTTTTACGTGACTGATCTGTCCTTAAGAGACACCGATGAA
CTGGCAACCAAGCTAGATGTCACTTACGGTGCTGGTATATCAAACTGGAA
GAATGTTGCTCACGAACTAATCGGCCGAGATTCAGAGCTATTTTATCAAA
TCAAAGACTTAGACCTGCATTATTATGGAGGGGGGAATCCAGCATTGGAA
TTTTTTAAACAGTTAGCTATGAAAGAACCTGATGTCACTATCCGGCAATT
CCAAAGTATTTGTAAAGAATTTCAGAGAATGGATATGTCGCTTTACATCG
ATCAAAAATTAAGTAATAATCTGGACGGGTTTGTACGAGATTTGCAGAGT
CAGCACAAAGAACGACTAGCGAGTTACATGAATTTAAATATACCAGGTGT
TTATGACTGGGAAATGTTTGCTGACGAATACGGTTTCAATAGACAACAAA
TTAATTTGATGCGAGCAGCTCTTAAAGAAGGTGGCAGTTTTAGTCCGACC
AAAAAATTGGTTGAATTGTTACAACAATCAAGACCCTTAACAACTCTTGA
AGAGATCAAAAGAGCATGCGCTAAACTGGGTCGGAATGATGTCGTCCTTG
TATTGAATAAAGCGATTGAGAAAAAGAAACAAAGGATGACGTAATGTTTG
TTCGATTTGCTTTAGTTAGAGGAGATTACTACGGGGTAGCGAGCACTCGC
CAACGGAAAAGGATTATCTTCCCATAGGTAAGACACTTGAACCTCCACTG
TTAGAGACCACCTTATCAACGGTTACCTTTAACTGCGAAGAGTTTCAAAG
CGTGCTAACTGCAAATGAGTATGAATAATTTTGATTTTTCATTGTCAAAC
CATGCGATACTTAACATTAGATTTTGACCATTATAAACTTCTATATCTTT
TCTGTTACACATTTATGCACAATCAGCCTTTTGGTAACCTATCGTACATT
AAAAGACTGTTGTACTGCAAGAAATTGCTTAAGTTTTGCTTAGGTTTTAC
TTTCGAAGAGGGCCATTTAAAGCGTGTCCGAAAAAAAAAGAGGAACAGAT
TTATGTATTATAAGTATTTATCTTTATATATAAAGTAAAATCTTTATGTA
ATAGTTATCGGACAGTTGCGAGTACAATATGAGAAATATTTTACGAGTTC
CCAGATTTTCCGTACAATATTTTCCGAGCCTTTAGGCGAGGAAAATATAC
GGAAAATCCGGAACGAATAAAATATTTCTCATATTGTACGAGCGTCAATT
TATATTTAATTTAATATTTAAAGGTTTTGTTTTTAAATAAGAGTTGTTTA
CTCATCAAGCTTTTTCACATTGGATTGACAGGGATGTGGAGCAAGATTGG
TCAGAAAAAGGAAAAGAAACTGCTTATACCAGCATAATATAACAATAGGC
AGANGGTTTTGTTTTTAAATAAGAGTGATATCATTTGCTTACTCATCAAG
CTTTTTCACATTGGATTGACAGGGATGTGGAGCAAGATTGGTCAGAAAAA
GGAAAAGAAACTGCTTATACCAGCATAATATAACAATAGGCAGAGACTTT
CCTGATATGAAATATGTTTCTGATATGAAACGGGAACACTTATATAAAAA
TAAAACCTTTAATCAAATATCTACTGATTGAACGAAACAAAATTTCATTT
TATTATGATAAATTCAAACTTCAATGATTTTGATAACTGTTTTTTTTTTT
TGTTCCACATTTTTCCGGACACAACTCATAGAAAAACATCAAAAAGCTTA
CATTCTTTTTATAAGCATTTCACTTATATGCATCGCACTTTTGTGTATAT
CTAGGCTCAGAAATTCAAGCTTATGTGAAGCATTTACCCGAGCCTAAATT
TTTCGATTTTGGCTATTTTTTGCTGGAATTTTAGGGATTTTTTCGAATTT
TCCTAAGATTTTGCTTAATATTTAAACATCCTTCTAGCATTTTTTAGCCT
TGTCCGGCTCTCGATATAATGTATGCTTTAAAAATAGCATGTAGACTTTT
TTAATTATATCACATCTTCTTAATATTTTTGTTCCGTATAATTGTAAGCA
ATTATAAAGAAAAAAGTGTAAAATTTGAAAAAAGGGTTAATAATAAAAGA
GGGG

Coding sequence (CDS) from alignment at sc0000231:393312..400315-

>TCONS_00016234 ID=TCONS_00016234|Name=TCONS_00016234|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at sc0000231:393312..400315- (Clytia hemisphaerica)
AGTTTTACGTGACTGATCTGTCCTTAAGAGACACCGATGAACTGGCAACC
AAGCTAGATGTCACTTACGGTGCTGGTATATCAAACTGGAAGAATGTTGC
TCACGAACTAATCGGCCGAGATTCAGAGCTATTTTATCAAATCAAAGACT
TAGACCTGCATTATTATGGAGGGGGGAATCCAGCATTGGAATTTTTTAAA
CAGTTAGCTATGAAAGAACCTGATGTCACTATCCGGCAATTCCAAAGTAT
TTGTAAAGAATTTCAGAGAATGGATATGTCGCTTTACATCGATCAAAAAT
TAAGTAATAATCTGGACGGGTTTGTACGAGATTTGCAGAGTCAGCACAAA
GAACGACTAGCGAGTTACATGAATTTAAATATACCAGGTGTTTATGACTG
GGAAATGTTTGCTGACGAATACGGTTTCAATAGACAACAAATTAATTTGA
TGCGAGCAGCTCTTAAAGAAGGTGGCAGTTTTAGTCCGACCAAAAAATTG
GTTGAATTGTTACAACAATCAAGACCCTTAACAACTCTTGAAGAGATCAA
AAGAGCATGCGCTAAACTGGGTCGGAATGATGTCGTCCTTGTATTGAATA
AAGCGATTGAGAAAAAGAAACAAAGGATGACGTAAAGGTTCCATCTTTTG
GGAGAGTGAAATTTCCAGACGAGCCTACCAGAAGTTATGAGGAGCCGAGA
CAACCACAACAACCACAACAACCGCAACAACCGCAGCAGCCAGCAAGGCA
AGAGAACCTTTATGAGAGAGATGGAGGTAATAAAGGCTGGTTGTTAAAAC
AATTAGTACCAACGGATGAAAATCCCATAAGCCGTGATGTTAAAGATGTT
GTCGCGATGAATTTGAATGTTGACTGGAAGAAATTTGCATACGGAATTAT
GTCAGATCAAGATATAGAAAGAATTGACCTTGACAATCGAACTGTATATG
AGAAATGCTTTGAAATGTTGAACAAATGGACTGAATCGAACCCTCATGAG
ATAACAAATGCCATATTGAAACTGAAATTAAATGAAATGCAGAGAAGAGA
CATTCTAATGGACATTGCCGACAATGTCGGAGTTTTACGTGACTGATCTG
TCCTTAAGAGACACCGATGAACTGGCAACCAAGCTAGATGTCACTTACGG
TGCTGGTATATCAAACTGGAAGAATGTTGCTCACGAACTAATCGGCCGAG
ATTCAGAGCTATTTTATCAAATCAAAGACTTAGACCTGCATTATTATGGA
GGGGGGAATCCAGCATTGGAATTTTTTAAACAGTTAGCTATGAAAGAACC
TGATGTCACTATCCGGCAATTCCAAAGTATTTGTAAAGAATTTCAGAGAA
TGGATATGTCGCTTTACATCGATCAAAAATTAAGTAATAATCTGGACGGG
TTTGTACGAGATTTGCAGAGTCAGCACAAAGAACGACTAGCGAGTTACAT
GAATTTAAATATACCAGGTGTTTATGACTGGGAAATGTTTGCTGACGAAT
ACGGTTTCAATAGACAACAAATTAATTTGATGCGAGCAGCTCTTAAAGAA
GGTGGCAGTTTTAGTCCGACCAAAAAATTGGTTGAATTGTTACAACAATC
AAGACCCTTAACAACTCTTGAAGAGATCAAAAGAGCATGCGCTAAACTGG
GTCGGAATGATGTCGTCCTTGTATTGAATAAAGCGATTGAGAAAAAGAAA
CAAAGGATGACGTAAAGGTTCCATCTTTTGGGAGAGTGAAATTTCCAGAC
GAGCCTACCAGAAGTTATGAGGAGCCGAGACAACCACAACAACCACAACA
ACCGCAACAACCGCAGCAGCCAGCAAGGCAAGAGAACCTTTATGAGAGAG
ATGGAGGTAATAAAGGCTGGTTGTTAAAACAATTAGTACCAACGGATGAA
AATCCCATAAGCCGTGATGTTAAAGATGTTGTCGCGATGAATTTGAATGT
TGACTGGAAGAAATTTGCATACGGAATTATGTCAGATCAAGATATAGAAA
GAATTGACCTTGACAATCGAACTGTATATGAGAAATGCTTTGAAATGTTG
AACAAATGGACTGAATCGAACCCTCATGAGATAACAAATGCCATATTGAA
ACTGAAATTAAATGAAATGCAGAGAAGAGACATTCTAATGGACATTGCCG
ACAATGTCGGAGTTTTACGTGACTGATCTGTCCTTAAGAGACACCGATGA
ACTGGCAACCAAGCTAGATGTCACTTACGGTGCTGGTATATCAAACTGGA
AGAATGTTGCTCACGAACTAATCGGCCGAGATTCAGAGCTATTTTATCAA
ATCAAAGACTTAGACCTGCATTATTATGGAGGGGGGAATCCAGCATTGGA
ATTTTTTAAACAGTTAGCTATGAAAGAACCTGATGTCACTATCCGGCAAT
TCCAAAGTATTTGTAAAGAATTTCAGAGAATGGATATGTCGCTTTACATC
GATCAAAAATTAAGTAATAATCTGGACGGGTTTGTACGAGATTTGCAGAG
TCAGCACAAAGAACGACTAGCGAGTTACATGAATTTAAATATACCAGGTG
TTTATGACTGGGAAATGTTTGCTGACGAATACGGTTTCAATAGACAACAA
ATTAATTTGATGCGAGCAGCTCTTAAAGAAGGTGGCAGTTTTAGTCCGAC
CAAAAAATTGGTTGAATTGTTACAACAATCAAGACCCTTAACAACTCTTG
AAGAGATCAAAAGAGCATGCGCTAAACTGGGTCGGAATGATGTCGTCCTT
GTATTGAATAAAGCGATTGAGAAAAAGAAACAAAGGATGACGTAAAGGTT
CCATCTTTTGGGAGAGTGAAATTTCCAGACGAGCCTACCAGAAGTTATGA
GGAGCCGAGACAACCACAACAACCACAACAACCGCAACAACCGCAGCAGC
CAGCAAGGCAAGAGAACCTTTATGAGAGAGATGGAGGTAATAAAGGCTGG
TTGTTAAAACAATTAGTACCAACGGATGAAAATCCCATAAGCCGTGATGT
TAAAGATGTTGTCGCGATGAATTTGAATGTTGACTGGAAGAAATTTGCAT
ACGGAATTATGTCAGATCAAGATATAGAAAGAATTGACCTTGACAATCGA
ACTGTATATGAGAAATGCTTTGAAATGTTGAACAAATGGACTGAATCGAA
CCCTCATGAGATAACAAATGCCATATTGAAACTGAAATTAAATGAAATGC
AGAGAAGAGACATTCTAATGGACATTGCCGACAATGTCGGAGTTTTACGT
GACTGATCTGTCCTTAAGAGACACCGATGAACTGGCAACCAAGCTAGATG
TCACTTACGGTGCTGGTATATCAAACTGGAAGAATGTTGCTCACGAACTA
ATCGGCCGAGATTCAGAGCTATTTTATCAAATCAAAGACTTAGACCTGCA
TTATTATGGAGGGGGGAATCCAGCATTGGAATTTTTTAAACAGTTAGCTA
TGAAAGAACCTGATGTCACTATCCGGCAATTCCAAAGTATTTGTAAAGAA
TTTCAGAGAATGGATATGTCGCTTTACATCGATCAAAAATTAAGTAATAA
TCTGGACGGGTTTGTACGAGATTTGCAGAGTCAGCACAAAGAACGACTAG
CGAGTTACATGAATTTAAATATACCAGGTGTTTATGACTGGGAAATGTTT
GCTGACGAATACGGTTTCAATAGACAACAAATTAATTTGATGCGAGCAGC
TCTTAAAGAAGGTGGCAGTTTTAGTCCGACCAAAAAATTGGTTGAATTGT
TACAACAATCAAGACCCTTAACAACTCTTGAAGAGATCAAAAGAGCATGC
GCTAAACTGGGTCGGAATGATGTCGTCCTTGTATTGAATAAAGCGATTGA
GAAAAAGAAACAAAGGATGACGTAAAGGTTCCATCTTTTGGGAGAGTGAA
ATTTCCAGACGAGCCTACCAGAAGTTATGAGGAGCCGAGACAACCACAAC
AACCACAACAACCGCAACAACCGCAGCAGCCAGCAAGGCAAGAGAACCTT
TATGAGAGAGATGGAGGTAATAAAGGCTGGTTGTTAAAACAATTAGTACC
AACGGATGAAAATCCCATAAGCCGTGATGTTAAAGATGTTGTCGCGATGA
ATTTGAATGTTGACTGGAAGAAATTTGCATACGGAATTATGTCAGATCAA
GATATAGAAAGAATTGACCTTGACAATCGAACTGTATATGAGAAATGCTT
TGAAATGTTGAACAAATGGACTGAATCGAACCCTCATGAGATAACAAATG
CCATATTGAAACTGAAATTAAATGAAATGCAGAGAAGAGACATTCTAATG
GACATTGCCGACAATGTCGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009066	XLOC_009066	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00016234-exon-sc0000231-1575043694:400171..400315	TCONS_00016234-exon-sc0000231-1575043694:400171..400315	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1575043694:399386..399673	TCONS_00016234-exon-sc0000231-1575043694:399386..399673	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1575043694:397147..397296	TCONS_00016234-exon-sc0000231-1575043694:397147..397296	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1575043694:393312..395406	TCONS_00016234-exon-sc0000231-1575043694:393312..395406	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1510915933:400171..400315	TCONS_00016234-exon-sc0000231-1510915933:400171..400315	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1510915933:399386..399673	TCONS_00016234-exon-sc0000231-1510915933:399386..399673	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1510915933:397147..397296	TCONS_00016234-exon-sc0000231-1510915933:397147..397296	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1510915933:393312..395406	TCONS_00016234-exon-sc0000231-1510915933:393312..395406	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1491911889:400171..400315	TCONS_00016234-exon-sc0000231-1491911889:400171..400315	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1491911889:399386..399673	TCONS_00016234-exon-sc0000231-1491911889:399386..399673	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1491911889:397147..397296	TCONS_00016234-exon-sc0000231-1491911889:397147..397296	Clytia hemisphaerica	exon
TCONS_00016234-exon-sc0000231-1491911889:393312..395406	TCONS_00016234-exon-sc0000231-1491911889:393312..395406	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00016234-protein	TCONS_00016234-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000231	supercontig	sc0000231:393312..400315 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.02218	4.14089	1.25451	2.32864	11.7997	8.37384	11.6569	11.0783	9.21608	11.881	9.18141	7.24819	8.41841	8.83267	7.08377	8.35507	7.79713	9.02753	7.40533	12.3389	6.11456	8.01985	10.2885	10.4165	9.7731	12.4837	7.84434	7.12775	7.58637	10.0864

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000488	Death_domain
IPR011029	DEATH-like_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00016234 vs. Swiss-Prot (Human)

BLAST of TCONS_00016234 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00016234 (transcript) - C. hemisphaerica