XLOC_009066 (gene) - C. hemisphaerica

Overview
NameXLOC_009066
Unique NameXLOC_009066
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000231:393312..400315-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009066 ID=XLOC_009066|Name=XLOC_009066|organism=Clytia hemisphaerica|type=gene|length=7004bp|location=Sequence derived from alignment at sc0000231:393312..400315- (Clytia hemisphaerica)
CATTAGTTAAGAAAAAGATGAAATCTTTTAACATTACTATAATACATTGA TGAAAATATGAAATGAGTAATGGAAATGAACCAATTTAAGATCATCATTG CTTAAACATTTTCCAGTAATCACCTCTATGATAGAGAAATGTCGGGTATG TATTCTTGATATAGTGTAACTTATGAAATTATGCAGTTCTTGCCCAAAAC ATCTCCTTTCTATCGCTTTCAAGAGTTTTGAGATATTCTGCGTGTAAATT CCTCTGAATCAATTTCTACTTTTTTTTCCGAAATAAAGATCTTCAATCAA GTCAAGCTATTATCTTTTAGCAAGAAAAGAAGTTCTCATAACCCGGCAAG AACCTATTAGACCCAGAGAAGGGGGTTGGACCCAGAGAAGTGGGTCAGTA CTAAAATCTCAGACTTATATAATGAAGACTAAAAGAGCAAGTTTCCCTTT TAAACCAACGTTTTGATATTTTATTATCAAATGATACTAAAATACTTGCA AGACTAATTCACCACGTGACTAAACGTCATGATATCTGAGATTTTAGTAC TGACTCTACTCCCCTGTTTAACATAATAAAATGAGAAATATCTACATGAT TCTCTGGTAATATCTAATTCATATTTTTTTTACTGTTTAAAGGCTGGTTG TTAAAACAATTAGTACCAACGGATGAAAATCCCATAAGCCGTGATGTTAA AGATGTTGTCGCGATGAATTTGAATGTTGACTGGAAGAAATTTGCATACG GAATTATGTCAGATCAAGATATAGAAAGAATTGACCTTGACAATCGAACT GTATATGAGAAATGCTTTGAAATGTTGAACAAATGGACTGAATCGAACCC TCATGAGATAACAAATGCCATATTGAAACTGAAATTAAATGAAATGCAGA GAAGAGACATTCTAATGGACATTGCCGACAGTAAGTGATATTATTGAGTT TAAAGCCCTGAAAAGGACTAGAGATGAATCTTCAACCTTTTTCAAGCATG AAAAAGTGAAACCTTAAGATTTGCGTCGCATTTCGAAATTTTGTTTGAAA AACACACGGGTCACGTGTTCAGGCTAGGAAGTAAGTATCTTCGTCTCCCA AACTCACATATCACAATCAATCCGCAATGGGGAAAACTCTCTAAAAAGAG AGTACACGTTTTTTTTAAGAAACTAGTTTTACCAAGTAGCCTCAACGTTT CTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAA CTTTTTGACACAATCAGCCTATTTTTCATGCAAAAAAAAATTGTTTTGAT TGGAAGGTTCTTAAAAACAACCGAATTAAAAAATGTCATTTTCTCATTCT CAGCCTCAGCATGTTTCTTATTTTTTAGGCATTCTGAGCCTCGTGTTTCT TAAAAGTGTGTTTCTTAAAAATAAAAAAAACGTGTAACGCCTCAATACCA ACATCACATTTATTATTAACCACTCTTGTGTTTCGGATCTAGCTCCTTCA GGGCTTTGAAATCAATGAGTAATACACTATTTACTCTACTGTTTTATTTT GAATTTAAAGTCTGTGGATACTGTACACGTAAAAATTTATACACCGTTGG AAAGATTTTTTTGGAGGCATATAATCTAAAAGATCAAAGATTTTTGAGAA ATTGAAAATTGGAGATGAAAAAAGAAGATGGAAAAAATGAAGATAGACAG TTTCAGTCAGACTTAAGAAATATAATATGGCTCCCAATGTTTGACAATAA AGTTCTGCCCGTGAGGGAGTAGAAATGAGATTATTGCCAACCATTACAAT CTGTCTAACATTGGCTTGCATTGACAGTTCAACGACATTGTAGTAACCAT TTTCTCAAAGGACTATTTCCAAATTTTTCTTACAAATAGAAAGAACTATT GCTACACTCTTGATATTAGTATTTATAATCTGATGTATACAGGATACAGG ATACAGGACGAAGATACAGAATGTATACGGGTTTGATCCGCGAATACAAT TTTGGACTAAGAAAAACTGTTGGAAATTTCGAATTTAGCGCTTTTCTCAC TAAGATAGAAAACAAATGCGTTTTTTTTCTAAGATAGTGTGACCAGTGAA ATAATGATATAATTCCATTTACTGTCTTATCAATTGTTTTTTTGGAGGTG GGAAATTCATAGAAACCAAATTCAACTCGTATAGCTCAAACCATGCAATT AATTTCAAAATTTGTATATGAGAAAAGAAATTATAACATGGGTATGACCC TTCTTTCTCTGTGTGCAGGCTAAAATTATTGCTACAGATTTTTAGGCCTT ACTCTTGAGTAGGAGTTTTACGCTCGAAACGAAGGAAGATATGACGTAGC CTAAGATTGTCATATTATGTATGCTTCTTAGAATTTAATAGAGGAATGTT TACATACCGTTGGTTAAAAAAATGTGATTATAATATTAGTTTTGTACTTG TGTTATGTCAATGTATAATAAGTTTGAACATGCATACACGGATGCTCTAA CTATTTTGTCAACTTTTTTAATTACTCATGACATTCGGCTTTTTCTGAGA AATAGGAAAGTCAAAAATGAAATTCAATAATTCAAAGGAATCTATATGAT GAAAAAAATGGTCGAAATACTTATCAATCATGGAATGTAGGCCTTTATGT AGTGTTGTCTATTCCTTCATATTTTTTTTAAAAACCAAGTATAAGTTGTG GTTTGTTGCTGTTTGTGTAAAGTGGTGCATTTTGTTGTTGTTTTGTTGTT GGTGTTTACTTAGGATTTTGGTTTAATTAATGTTGTCTTTCGAAGAGTGC TGTATGAAAAATAAAAGTTTTAGTTATAGAAAACTGTTAACTTCGTGGCT TCACTTTTTTTCTGGCCATACATAAGGTATCATTCAGTAGCAAAAACACC ATCAAATAAGAAATATACAAACACAACACAATAAACATAGACGGCCTAAG ATCTTTTTATATCGTCCAATATATATAAGGTATCATTCCATACAGCACGC TGATTTCTCACCATTTTAGAGGTTCCATCTTTTGGGAGAGTGAAATTTCC AGACGAGCCTACCAGAAGTTATGAGGAGCCGAGACAACCACAACAACCAC AACAACCGCAACAACCGCAGCAGCCAGCAAGGCAAGAGAACCTTTATGAG AGAGATGGAGGTAATAAAGGTAAAATATAATGTGATATGGAAAATTGCAT GTTAATTGCAAATATTAATTACATATTCTTAAGGAGCGATAGCCAAGTGG TCAAAGGCGTCAGCGTTTCAAACTAGGGATTTGTGTTTTGTCGCCCCTTC CAATGTTCCGTTCAGCTCATAGATAGCCGAGCCGGCTAGCCGTGGCCCCG TGAAAACAATTGAATAACTTCTGAAAGTTATAGATTACTGGGCTATCCAC GTTAAATATCGACTCTGTCTATCTATCTATGTCTCTATTTGTTTTATATA ATGTTCTTTTCATATTTATTTATACTGTCGACCCCTCATTTAATGCAGAT AATACCCGGGGGGTACTAGGTTTGCGAGGTGACGGGTATGTCCGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGGGAG ATAATGTTAGTTAGAGGTGTCTAAAAAGTTCAGGGGTAATTCTCAATCAA TCTGTTCTATATCCGTTACTTTTTTCTTATTTAGTTATACAGTGACCTCC CCCCTCTGAGATGACAATTTTGAAATTGACTAAAAAGTTCTGGAGTTATT CAATCCATGATCAATCATTTTTAGAAATATATCTCAATCTAGTTTTTTGT CAACATGATCCAATTTCTTTGCAAATTGTTGCATTTGTTTTTCTACTCGA TTCTTTCCAGTATTAAGGTGTCATGGGCAACCCTGGAAAAAAATATCAGG AGTTAAAATCAAAAAGATATGTTGTAAATTACCATCTATAAGTTTCCCAA AGTTGACGTTGTTAACTACAGTACAAATACATTAGAACCATTTCCTTTTA ATTAATGAACCCATTTTAATGTTGATTATTGTAAACAAGTTGTCTAGTCT AATAGACTAATGAGTAGTTAAGCCATTATTAACATGAGATAATTTAAATT CAATGCTTTTACAGGTCTTTTAACATAAAGATAAAGCTTACCGAAAAAAA TTATCATGGGTCTTTTTTAAAGTAGTGTACTACGTTGCTTTTTACTTTCA ATTTTATGTATGTTGAAAAACTTGAAATTTAGGAACATAATGTTGAAAAT AGGCAGTAGAGACTTTGTCAAACATTTCAGCTGAAAGAATTGGAATGTTT GTTGTGGAAGGGGGTTGAAGTTTGAATGTATGAAATTTTAGTTTTCTAAC TTTATAAAATGACTGTTCCATAAACTACTGTGTTGTTTTCTTTGTTTCTT TTTCATAAGAGTTTTACGTGACTGATCTGTCCTTAAGAGACACCGATGAA CTGGCAACCAAGCTAGATGTCACTTACGGTGCTGGTATATCAAACTGGAA GAATGTTGCTCACGAACTAATCGGCCGAGATTCAGAGCTATTTTATCAAA TCAAAGACTTAGACCTGCATTATTATGGAGGGGGGAATCCAGCATTGGAA TTTTTTAAACAGTTAGCTATGAAAGAACCTGATGTCACTATCCGGCAATT CCAAAGTATTTGTAAAGAATTTCAGAGAATGGATATGTCGCTTTACATCG ATCAAAAATTAAGTAATAATCTGGACGGGTTTGTACGAGATTTGCAGAGT CAGCACAAAGAACGACTAGCGAGTTACATGAATTTAAATATACCAGGTGT TTATGACTGGGAAATGTTTGCTGACGAATACGGTTTCAATAGACAACAAA TTAATTTGATGCGAGCAGCTCTTAAAGAAGGTGGCAGTTTTAGTCCGACC AAAAAATTGGTTGAATTGTTACAACAATCAAGACCCTTAACAACTCTTGA AGAGATCAAAAGAGCATGCGCTAAACTGGGTCGGAATGATGTCGTCCTTG TATTGAATAAAGCGATTGAGAAAAAGAAACAAAGGATGACGTAATGTTTG TTCGATTTGCTTTAGTTAGAGGAGATTACTACGGGGTAGCGAGCACTCGC CAACGGAAAAGGATTATCTTCCCATAGGTAAGACACTTGAACCTCCACTG TTAGAGACCACCTTATCAACGGTTACCTTTAACTGCGAAGAGTTTCAAAG CGTGCTAACTGCAAATGAGTATGAATAATTTTGATTTTTCATTGTCAAAC CATGCGATACTTAACATTAGATTTTGACCATTATAAACTTCTATATCTTT TCTGTTACACATTTATGCACAATCAGCCTTTTGGTAACCTATCGTACATT AAAAGACTGTTGTACTGCAAGAAATTGCTTAAGTTTTGCTTAGGTTTTAC TTTCGAAGAGGGCCATTTAAAGCGTGTCCGAAAAAAAAAGAGGAACAGAT TTATGTATTATAAGTATTTATCTTTATATATAAAGTAAAATCTTTATGTA ATAGTTATCGGACAGTTGCGAGTACAATATGAGAAATATTTTACGAGTTC CCAGATTTTCCGTACAATATTTTCCGAGCCTTTAGGCGAGGAAAATATAC GGAAAATCCGGAACGAATAAAATATTTCTCATATTGTACGAGCGTCAATT TATATTTAATTTAATATTTAAAGGTTTTGTTTTTAAATAAGAGTTGTTTA CTCATCAAGCTTTTTCACATTGGATTGACAGGGATGTGGAGCAAGATTGG TCAGAAAAAGGAAAAGAAACTGCTTATACCAGCATAATATAACAATAGGC AGANGGTTTTGTTTTTAAATAAGAGTGATATCATTTGCTTACTCATCAAG CTTTTTCACATTGGATTGACAGGGATGTGGAGCAAGATTGGTCAGAAAAA GGAAAAGAAACTGCTTATACCAGCATAATATAACAATAGGCAGAGACTTT CCTGATATGAAATATGTTTCTGATATGAAACGGGAACACTTATATAAAAA TAAAACCTTTAATCAAATATCTACTGATTGAACGAAACAAAATTTCATTT TATTATGATAAATTCAAACTTCAATGATTTTGATAACTGTTTTTTTTTTT TGTTCCACATTTTTCCGGACACAACTCATAGAAAAACATCAAAAAGCTTA CATTCTTTTTATAAGCATTTCACTTATATGCATCGCACTTTTGTGTATAT CTAGGCTCAGAAATTCAAGCTTATGTGAAGCATTTACCCGAGCCTAAATT TTTCGATTTTGGCTATTTTTTGCTGGAATTTTAGGGATTTTTTCGAATTT TCCTAAGATTTTGCTTAATATTTAAACATCCTTCTAGCATTTTTTAGCCT TGTCCGGCTCTCGATATAATGTATGCTTTAAAAATAGCATGTAGACTTTT TTAATTATATCACATCTTCTTAATATTTTTGTTCCGTATAATTGTAAGCA ATTATAAAGAAAAAAGTGTAAAATTTGAAAAAAGGGTTAATAATAAAAGA GGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016235TCONS_00016235Clytia hemisphaericatranscript
TCONS_00016234TCONS_00016234Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016234-proteinTCONS_00016234-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000231supercontigsc0000231:393312..400315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.3 5.71 3.1 2.75 13.96 10.05 14.08 14.81 11.2 13.7 11.17 9.1 14.52 12.2 11.97 11.06 11.48 14 13.05 14.99 12.06 11.74 15.27 15.55 16.15 17.1 10.69 10.51 12.69 14.98