TCONS_00015323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015323
Unique NameTCONS_00015323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2636

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015323 ID=TCONS_00015323|Name=TCONS_00015323|organism=Clytia hemisphaerica|type=transcript|length=2636bp
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc
tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG
GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC
TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA
ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa
aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC
AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC
ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC
ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC
AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGACGA
TGATGTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATGAAA
TCGAAATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaaatagaatc
gGCAATTCCATCAAAACCGgTTATGGCAAGAAGTTTCAAggtgaaaagaa
aagaacgacCACTGTGCTGCCTGAGCCAAATCCTATAAAGATCGAAGTCG
AAATTCCGAAAGAAGAAGAACTATCTGACTCTGAATTACCTTCATTTCCA
CAACCGTATTCTCCATCGACCTATTTTCcagaggaagaagaagaagaaga
aacagaAAGTCAAGAAGCTATTTCGGAAACAGTCCAGCCtaagtttcaaa
gaaaaattccGCGGATAATTTGGGAAGGAAAGTCAGTAAATGAGGTACCA
AACATTCCTTACGACATTGATGACATAAAGGTTTACCATGTCCAAAGCTC
TGATGGTCTTTTACCGCAAAAATTGAGAGACGGTAGGAATTGGAAGCCTG
ATTCCAGAACAAGTTGGGCTGGCTATAAGTCCGTTCGATATCGTGAATGC
AGAGGTGGATTTACTTGCTCCAATCCTTCATGTCCTTATGTTAAAAAGTT
TGGAAAATCAAATACTGTTTCGTTTGATAAAAATCATTATTGTAAATTCT
GTCAAGCATCTGGGATTTACGAAAGGTGCGAAGCAAGGAAATATATAGCC
TATACACACAATCCTAATGAAGCTTATGTGTACCACTATGGCTTCCATAC
TTGTGTACCAAAAGAAATCCATCAGGCTCCTATCAGCGAAATCGTACGCG
AAGTTCAAAACAACCCATCTGTTCGACCTACTGAAATCCAGACAAATTTG
ATTCTTTCAGCTATCCGGAATAGAGATTCCTGGGATGAAATCATGCGTAC
CGCGGCACAAGTGGCAGATACAAGAAAAATTTCTAACGAGAAATCAAAGC
AGAAGAAGGTTGTTTATCCTTtaggtgaaaatttcaagggTGTATCTGAT
TTGAAAGAATTCACCGACACAAAGGACAAATTTTTGATATACGATATCAA
CCGAAAAAAACAATACATTTTCAAAAGATCAATGGATTCTTTGAAAATTG
CAAAAGATATGTGCGAATTAGACAACGTTTTGGAGAATGAGTATTGGCAA
TCACAAGAGAACTCTGAATTCTATAACCCTAACCGCAAGTACATCTCACC
CACTGCTGAAAAGACAAGTGCCGCTTGCTTCGATGCAGTGTAATCATGAG
GACGGCGAAACAGTTGAGACATTTTGGAGAGTGTGCAATAAAGCCTACAA
AGAGGCAAACAGTTGCACTAACCGTTTCGAGCCCTCTGGATGGGTGACAG
ATATGGCGACAGCGAATTTTAACGGGTTGTCGAAAATGTATGGTGAAGAT
GTGCTTGAAAAAGTAAAGGGTTGTGAATTCCACTACAAACAATCAGTAGA
AAAGAAAGCAAAGACTTTAGGCGAAAAAGGAGACGAATTTCGCGCAAAGT
CTTTAGAGCTATTGGAAGCGGCAACTGAAGAGGCATACACAGCCTTACAT
AGAGAACTTGAATCTTTTATATCAGGTATTGTTTTACTCGCTTTGCTACT
CCTTCAAACGAAGaaactttcgaaaatttgacaaaacacGAAAGTTTCtt
tccgcgaaagtttcttcgataaagggctctgaccatagtgaaaaatcgtt
tttggaatttgaagataaaaccttttgTTTTCACCTACttaacattttaa
aaaaagactcagtttgaaaaatcttgtttAAATATCATAGTAGTGTTAgt
taaattttttctgaaaatctttcTCATTCAATGTGTAAAAAAGTAATGAT
TGGTTTtatcagagatttgggaaaggAAGATAGGTATCGGCGTATTCATG
TATAGAAATATGTACTGTTATAGTCTTTTGTTTCTTTTGAAATCATTCAA
ATATAACTACTATAACAACCTTTTCTGCCAATCAGAGTAAGGAATTATAA
AACCTCTTTGCCAAATCTTTTGAGCCCGTGCCGAGAAAAACTGACTCTAC
CAACAGAATCCTGGTAATATTCGAATATTTTCTACCTGGAAAAATTTACA
TTTGACTTCCAAAAATTCTTGCTGCTAAGATATTCG
Run BLAST on NCBI

protein sequence of TCONS_00015323-protein

>TCONS_00015323-protein ID=TCONS_00015323-protein|Name=TCONS_00015323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
NGINFISHLYFNFSFSSGTEPQFPCDDQIVDVPGDGHCLIYAWELCLHAS
SQNDISYMSLKDMLERELKSNKETYMKFLMKASKIDYDINVLKYIYKKTS
NNDLCDILILALSNATSLSCMIWEERNRRFTRAHTIFPISGSSNDRIHVL
KRNDHYLAIVDTNNKDDDVIIVREVKPLKIDDEIEITKEVPANPENKNRI
GNSIKTGYGKKFQGEKKRTTTVLPEPNPIKIEVEIPKEEELSDSELPSFP
QPYSPSTYFPEEEEEEETESQEAISETVQPKFQRKIPRIIWEGKSVNEVP
NIPYDIDDIKVYHVQSSDGLLPQKLRDGRNWKPDSRTSWAGYKSVRYREC
RGGFTCSNPSCPYVKKFGKSNTVSFDKNHYCKFCQASGIYERCEARKYIA
YTHNPNEAYVYHYGFHTCVPKEIHQAPISEIVREVQNNPSVRPTEIQTNL
ILSAIRNRDSWDEIMRTAAQVADTRKISNEKSKQKKVVYPLGENFKGVSD
LKEFTDTKDKFLIYDINRKKQYIFKRSMDSLKIAKDMCELDNVLENEYWQ
SQENSEFYNPNRKYISPTAEKTSAACFDAV
Run BLAST on NCBI

transcript from alignment at sc0000210:222383..231087+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015323 ID=TCONS_00015323|Name=TCONS_00015323|organism=Clytia hemisphaerica|type=transcript|length=8705bp|location=Sequence derived from alignment at sc0000210:222383..231087+ (Clytia hemisphaerica)
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc
tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG
GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC
TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA
ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa
aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC
AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC
ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC
ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC
AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGGTGA
AACTCGTTTTAGCTTTTAAACAACTTTAGACACTTTTGTTTTGAATCGAA
TTTTTAGAACAAAAATTTAGATTATGTAATAAGACAAGCCATTGGTCCAG
CAataaattttaaggtttttagaAGAAAACTACGTAGAGGCGTAAAAATA
TTATAACTTGATTAAATTAGTGTATCGGTGCAGTATAGATGGTAGTAAAA
TGATTCTTCCCTATACGAATAGATTTTGCTAAATCAACTTTTATGTTATA
CATTTCAGTGTCGTAGGAAGCCTTTTGATTTTcttggggggagggggtga
aaGTTAGTGACACCTCAAAGGCCAACTGTTGTTCAGAACGAAGAGCGAGG
AAATTCTGAATATTCACGGTCCTAGAATGCCAGAAATCttactcaaaaaa
tgaaaaagatgaaaaattcaaaGGAATATTACTCCAATTCTCACAGTAAA
ACAtctccaaaaaaattatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAGTATA
TCAACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagt
tatGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACC
TGGTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCA
GCTCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGA
GAACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttc
aaaaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCT
CCAACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACC
TCACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGC
ACACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTC
TCAAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGGT
GAAACTCGTTTTAGCTTTTAAACAACTTTAGACACTTTTGTTTTGAATCG
AATTTTTAGAACAAAAATTTAGATTATGTAATAAGACAAGCCATTGATCC
AGCAataaattttaaggtttttagaAGAAAACTACGTAGAGGCGTAAAAA
TATTATAACTTGATTAAATTAGTGTATCGGTGCAGTATAGCTGGTAGTAA
AATGATTCTTCCCTATACGAATAGATTTTGCTAAATCAACTTTTATGTTA
TACATTTCAGTGTCGTAGGAAGCCTTTTGATTTTcttggggggagggggt
gaaaGTTAGTGACACCTCAAAGGCCAACTGTTGTTCAGAACGAAGAGCGA
GGAAATTCTGAATATTCACGGTCCTAGAATGCCAGAAATCttactcaaaa
aatgaaaaagatgaaaaattcaaaGGAATATTACTCCAATTCTCACAGTA
AAACAtctccaaaaaaattatttNTTTGTTTGGTCACGTGATCTCGTATT
CTTTTTGTAATTGGTCTTTGAAACTTGAACGCCACGTGGGTCTCTATCGG
AAAATATTAGTGAGAAAGTGGGGCACCCCGCGGTGCAGCGTGGTATTTCA
AATGGAAAAGTGctaactagaactagaactttATAAAGACATTTCTTATA
ATTTTAGTAATAATGACAatggttttcaactttttaaattgtCTTTCACG
AATGTTTTACAGAGTCTCTTGATAATCGACAGTCTTTAATCGTGAAGGAT
ATTTGCAGCAGAAAAATCATTGGATAAGAAGAAATCCAAATTTACGGGTT
TGCAATTAAAGAAGTTAAACTTCACATCAACTTTTAATGTTAGGGTACAG
AGATAGAGCAAGGTATTTTTCAATGTGCTTTATCCAGCTTCGCTATTACA
TATCCCTGCCTCgatcaacaaattttttttgaatgtttttttcatttagg
ATGAAAGCTTTTCGAGGCAAAATTCGAAGTGTTTAAAATATGTTTTGCGA
GAATTTTATGAATTCAAGCTAATTTATGTATCTGATTTCTTAATAGAAGA
CGATGATGTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATG
AAATCGAAATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaaataga
atcgGCAATTCCATCAAAACCGGTAAATTCTATACTATACATTTTATATA
GAATTGTTTTTATTCATACTTTAAATTTAAATATTCCTTGAGCTTTTTTG
GGCCCCTTCAGGCCCACGTGTTTTAGGCAGGGCAGTGTGGTGTGTAGTGA
TGTGGCTTTAAGTCAATCTTTTTCTAATTCTAATAGCTAGAGGACATAAT
CTAGTGTAGCTGAACCaaggtttttttatattttcgttcactcaatgtca
aaaaagtgaattttgggcattttttttGATACtgtaaaagaaattatttc
aaaatcttttgtgtTACAACTTAATGGGCGTTTTATTTCAGTCAACTCAG
GGGGCTACGCCCTCCTGTATGGTCCTTGTCAGATATAatcgacattggca
cttaaagtgTTAAAAGAAAGTTAAGTGTAAACTTCCTTAACCTGAGTATC
AGAGGACAAGTTTTCTGTGAAAATATTGACCTCTGACGACAAATGCTATG
ATTTTCATCGCGCATGCCCGAACCATTTGCAAAATCTAATTGTTATCATG
TCAAAGAACTACCTAAGAATTATGGGATGGAGAGAAttcatacacccctg
tctcagtgacctggTGGGAATTTTTTTGCTAGTGGGGATAAATAAAGAGA
CATAAAATCCAATGGGGTTAtcaaaaacgggtttttttccactggggata
cgaaattctattgttctttatTCGAAATATTGGTGGGGATGAGACATTTA
AGTCGATCagaatttagtttttttacgATTTTCAATAGGGATGGGCCTTT
TTCTAGTGGGGACGAATTTCTATGCTATTTTTCCGCCGGTGATGACTTTT
TGGGCCTGTATTTCCAGTGGGTAGGGGGTCCCACCGGttctgtgaaacag
gggtgtattcaTTGCCTTTACTTGCTACAGTCTTATTTAGCAAATAATAA
ACCTTGTGCTCAGAACTAAAAGAATTACACCATTAGAAAGCTTNAATATT
CCTTGAGCTTTTTTGGGCCCCTTCAGGCCCACGTGTTTTAGGCAGGGCAG
TGTGGTGTGTAGTGATGTGGCTTTAAGTCAATCTTTTTCTAATTCTAATA
GCTAGAGGACATAATCTAGTGTAGCTGAACCaaggtttttttatattttc
gttcactcaatgtcaaaaaagtgaattttgggcattttttttGATACtgt
aaaagaaattatttcaaaatcttttgtgtTACAACTTAATGGGCGTTTTA
TTTCAGTCAACTCAGGGGGCTACGCCCTCCTGTATGGTCCTTGTCAGATA
TAatcgacattggcacttaaagtgTTAAAAGAAAGTTAAGTGTAAACTTC
CTTAACCTGAGTATCAGAGGACAAGTTTTCTGTGAAAATATTGACCTCTG
ACGACAAATGCTATGATTTTCATCGCGCATGCCCGAACCATTTGCAAAAT
CTAATTGTTATCATGTCAAAGAACTACCTAAGAATTATGGGATGGAGAGA
AttcatacacccctgtctcagtgacctggTGGGAATTTTTTTGCTAGTGG
GGATAAATAAAGAGACATAAAATCCAATGGGGTTAtcaaaaacgggtttt
tttccactggggatacgaaattctattgttctttatTCGAAATATTGGTG
GGGATGAGACATTTAAGTCGATCagaatttagtttttttacgattttcaa
tggggatgggCCTTTTTCTAGTGGGGACGAATTTCTATGCTATTTTTCCG
CCGGTGATGACTTTTTGGGCCTGTATTTCCAGTGGGTAGGGGGTCCCACC
GGttctgtgaaacaggggtgtattcaTTGCCTTTACTTGCTACAGTCTTA
TTTAGCAAATAATAAACCTTGTGCTCAGAACTAAAAGAATTACACCATTA
GAAAgctcttgattttctaaaaattatgaTATAAAAATCGCATCTTGAAC
AAAACAAAAGACTTGACATTATTTTCTTAAAGCTTTCGGTCGTGTTCAGa
tctgaaagtttaagtttaaggtttaagtagtactttgttgatatgggaat
tcaattataatcacttttcttttgtcatcatcgattggcgatctcgagga
atctcctttcctaacttgaaCGTTATATGTATGAAATAAAGACCTTTCTT
AATTCCCTTGGGAATATGTTTTTTCATACCAAGAGCCTTTAACCTGATTG
GCCTTATGGGAGTATATGTGCAAGAAAAACATATATGCCATTCTCAAACT
Aagaaactaaagtctgtccagatataattggcagtggaaacaagaatgcc
tgtaacttttgatagtcaaatataattatagaaattttttttgcttgttt
tagagaatcaaaagcgctatatttgattgtattcttggtttaaaaatttc
aagatttttagcggttaaatttgcgattgcaaaaattgagctttttatct
acttatgctataactttcatttttacatcaATGGCAGTTCAACCTTagat
taagaagtttgttaaatttcaaggcaaacagaaaagtccttcggaagata
tgggacccgaaataccccttggtagcacttttctgtgaaatatcaaatct
ccaacttattgctaaaaaacgggggtagtgatatcattgatataacagtt
tttggatcataacacattttatgatctttttaatgacctcatagccaaac
tgtgtttagtgttttgggaattagcaaacttctttaatgactttaaaata
acaaaggcaatataagttcatgcttatcttttcaataaaaacaattatac
tgtgatttcacttcgtttcgaaataatcaatgataccaataataccaaNN
caaatttaacaaacttcttaatctaaggttgaactaccactggtgtaaaa
atgaaaattatagcataagtaggaaaaaagctcaatttttgcaatcgcaa
atttaaccgctaaagatcgcgaatttttcaaccaaaaatacattcaaata
tagcactattgattctctaaaacaagcaaaaacaatttccatgattatat
ttgactatcaaaagttacaggcattcttgtttccactgccaattatatct
ggacagactttagataCTACTATCTCTATTTTCTCGCGTATTTTGTTATA
ACGTATTTTTCGTCCCTTAAGGGTGTATTGGCTTATATCTCTTTATAGAA
ATTACTTTTAGCTGGCTCAAGTTTACTTCCATTTtaacaagaagaaaaat
cagCAAATCCTGGGTCGAACTGGGtttttttaaactgtttttttttaaga
gcgAAGCGATGTCGCGCCAGCGGCATGCGACGCTGGCTTGCCAGCTAGTA
CataataattttcttatttaggTTATGGCAAGAAGTTTCAAggtgaaaag
aaaagaacgacCACTGTGCTGCCTGAGCCAAGCAAGTTTTTCATAttaca
ttttcatattttgaccaTTAGTAAACCTAGAATTACTTCGGGAAATGAGG
ATTCAGAGTGACTCTTAAGAGACTTTTATGGACTTTTAAGGCgaacccaa
aaaattttttgtttccggtccaccgggtgacgaaaaaagaCACTCTCTCG
GCCGgccgcgaaaaatttttttgtgctaaatttcgatcccaaaactcgat
tttttaaagcactcgtaGAAGTTAAAAGGATGGTATTTTTTTGCCTTAAA
TCTGCAGTAATTTGACACCAAAATGCAAATTTTGTAAGAAAAACTTTGAG
TACGATGTCAAAATAATATTCTAATAATTGCCTGAAAGAGGGCCGGAAAT
TTCTGGGTTTTGATACTTTTAAGATCGGCCTGTAAAACTCCTATtgtttt
tgacttgaaattttgagctattgTATTATAGGTATAATTTAAATTTACCA
AATGTTCAACTTTTActggtaaattttcaaacagcTCGAAGTCCATCGTG
ggataaatttgtctttgtaatCAATCATTACCTCTAATCTCTCCATAGAT
CCTATAAAGATCGAAGTCGAAATTCCGAAAGAAGAAGAACTATCTGACTC
TGAATTACCTTCATTTCCACAACCGTATTCTCCATCGACCTATTTTCcag
aggaagaagaagaagaagaaacagaAAGTCAAGAAGCTATTTCGGAAACA
GTCCAGCCtaagtttcaaagaaaaattccGCGGATAATTTGGGAAGGAAA
GTCAGTAAATGAGGTACCAAACATTCCTTACGACATTGATGACATAAAGG
TTTACCATGTCCAAAGCTCTGATGGTCTTTTACCGCAAAAATTGAGAGAC
GGTAGGAATTGGAAGCCTGATTCCAGAACAAGTTGGGCTGGCTATAAGTC
CGTTCGATATCGTGAATGCAGAGGTGGATTTACTTGCTCCAATCCTTCAT
GTCCTTATGTTAAAAAGTTTGGAAAATCAAATACTGTTTCGTTTGATAAA
AATCATTATTGTAAATTCTGTCAAGCATCTGGGATTTACGAAAGGTGCGA
AGCAAGGAAATATATAGCCTATACACACAATCCTAATGAAGCTTATGTGT
ACCACTATGGCTTCCATACTTGTGTACCAAAAGAAATCCATCAGGCTCCT
ATCAGCGAAATCGTACGCGAAGTTCAAAACAACCCATCTGTTCGACCTAC
TGAAATCCAGACAAATTTGATTCTTTCAGCTATCCGGAATAGAGATTCCT
GGGATGAAATCATGCGTACCGCGGCACAAGTGGCAGATACAAGAAAAATT
TCTAACGAGAAATCAAAGCAGAAGAAGGTTGTTTATCCTTtaggtgaaaa
tttcaagggTGTATCTGATTTGAAAGAATTCACCGACACAAAGGACAAAT
TTTTGATATACGATATCAACCGAAAAAAACAATACATTTTCAAAAGATCA
ATGGATTCTTTGAAAATTGCAAAAGATATGTGCGAATTAGACAACGTTTT
GGAGAATGAGTATTGGCAATCACAAGAGAACTCTGAATTCTATAACCCTA
ACCGCAAGTACATCTCACCCACTGCTGAAAAGACAAGTGCCGCTTGCTTC
GATGCAGTGTAATCATGAGGACGGCGAAACAGTTGAGACATTTTGGAGAG
TGTGCAATAAAGCCTACAAAGAGGCAAACAGTTGCACTAACCGTTTCGAG
CCCTCTGGATGGGTGACAGATATGGCGACAGCGAATTTTAACGGGTTGTC
GAAAATGTATGGTGAAGATGTGCTTGAAAAAGTAAAGGGTTGTGAATTCC
ACTACAAACAATCAGTAGAAAAGAAAGCAAAGACTTTAGGCGAAAAAGGA
GACGAATTTCGCGCAAAGTCTTTAGAGCTATTGGAAGCGGCAACTGAAGA
GGCATACACAGCCTTACATAGAGAACTTGAATCTTTTATATCAGGTATTG
TTTTACTCGCTTTGCTACTCCTTCAAACGAAGaaactttcgaaaatttga
caaaacacGAAAGTTTCtttccgcgaaagtttcttcgataaagggctctg
accatagtgaaaaatcgtttttggaatttgaagataaaaccttttgTTTT
CACCTACttaacattttaaaaaaagactcagtttgaaaaatcttgtttAA
ATATCATAGTAGTGTTAgttaaattttttctgaaaatctttcTCATTCAA
TGTGTAAAAAAGTAATGATTGGTTTtatcagagatttgggaaaggAAGAT
AGGTATCGGCGTATTCATGTATAGAAATATGTACTGTTATAGTCTTTTGT
TTCTTTTGAAATCATTCAAATATAACTACTATAACAACCTTTTCTGCCAA
TCAGAGTAAGGAATTATAAAACCTCTTTGCCAAATCTTTTGAGCCCGTGC
CGAGAAAAACTGACTCTACCAACAGAATCCTGGTAATATTCGAATATTTT
CTACCTGGAAAAATTTACATTTGACTTCCAAAAATTCTTGCTGCTAAGAT
ATTCG

Coding sequence (CDS) from alignment at sc0000210:222383..231087+

>TCONS_00015323 ID=TCONS_00015323|Name=TCONS_00015323|organism=Clytia hemisphaerica|type=CDS|length=6972bp|location=Sequence derived from alignment at sc0000210:222383..231087+ (Clytia hemisphaerica)
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc
tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG
GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC
TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA
ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa
aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC
AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC
ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC
ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC
AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGACGA
TGATGTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATGAAA
TCGAAATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaaatagaatc
gGCAATTCCATCAAAACCGgTTATGGCAAGAAGTTTCAAggtgaaaagaa
aagaacgacCACTGTGCTGCCTGAGCCAAATCCTATAAAGATCGAAGTCG
AAATTCCGAAAGAAGAAGAACTATCTGACTCTGAATTACCTTCATTTCCA
CAACCGTATTCTCCATCGACCTATTTTCcagaggaagaagaagaagaaga
aacagaAAGTCAAGAAGCTATTTCGGAAACAGTCCAGCCtaagtttcaaa
gaaaaattccGCGGATAATTTGGGAAGGAAAGTCAGTAAATGAGGTACCA
AACATTCCTTACGACATTGATGACATAAAGGTTTACCATGTCCAAAGCTC
TGATGGTCTTTTACCGCAAAAATTGAGAGACGGTAGGAATTGGAAGCCTG
ATTCCAGAACAAGTTGGGCTGGCTATAAGTCCGTTCGATATCGTGAATGC
AGAGGTGGATTTACTTGCTCCAATCCTTCATGTCCTTATGTTAAAAAGTT
TGGAAAATCAAATACTGTTTCGTTTGATAAAAATCATTATTGTAAATTCT
GTCAAGCATCTGGGATTTACGAAAGGTGCGAAGCAAGGAAATATATAGCC
TATACACACAATCCTAATGAAGCTTATGTGTACCACTATGGCTTCCATAC
TTGTGTACCAAAAGAAATCCATCAGGCTCCTATCAGCGAAATCGTACGCG
AAGTTCAAAACAACCCATCTGTTCGACCTACTGAAATCCAGACAAATTTG
ATTCTTTCAGCTATCCGGAATAGAGATTCCTGGGATGAAATCATGCGTAC
CGCGGCACAAGTGGCAGATACAAGAAAAATTTCTAACGAGAAATCAAAGC
AGAAGAAGGTTGTTTATCCTTtaggtgaaaatttcaagggTGTATCTGAT
TTGAAAGAATTCACCGACACAAAGGACAAATTTTTGATATACGATATCAA
CCGAAAAAAACAATACATTTTCAAAAGATCAATGGATTCTTTGAAAATTG
CAAAAGATATGTGCGAATTAGACAACGTTTTGGAGAATGAGTATTGGCAA
TCACAAGAGAACTCTGAATTCTATAACCCTAACCGCAAGTACATCTCACC
CACTGCTGAAAAGACAAGTGCCGCTTGCTTCGATGCAGTGTAAAACGGTA
TTAACTTCATTTCGCatctttattttaatttttctttcagttctGGCACA
GAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTGGTGATGG
GCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGCTCCCAAA
ATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGAACTCAAA
TCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaaaaattga
tTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCCAACAACG
ATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTCACTCTCG
TGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCACACACGAT
ATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTCAAACGCA
ACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGACGATGATGTT
ATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATGAAATCGAAAT
CACCAAAGAAGTTCCAGCTaatcctgaaaataaaaatagaatcgGCAATT
CCATCAAAACCGgTTATGGCAAGAAGTTTCAAggtgaaaagaaaagaacg
acCACTGTGCTGCCTGAGCCAAATCCTATAAAGATCGAAGTCGAAATTCC
GAAAGAAGAAGAACTATCTGACTCTGAATTACCTTCATTTCCACAACCGT
ATTCTCCATCGACCTATTTTCcagaggaagaagaagaagaagaaacagaA
AGTCAAGAAGCTATTTCGGAAACAGTCCAGCCtaagtttcaaagaaaaat
tccGCGGATAATTTGGGAAGGAAAGTCAGTAAATGAGGTACCAAACATTC
CTTACGACATTGATGACATAAAGGTTTACCATGTCCAAAGCTCTGATGGT
CTTTTACCGCAAAAATTGAGAGACGGTAGGAATTGGAAGCCTGATTCCAG
AACAAGTTGGGCTGGCTATAAGTCCGTTCGATATCGTGAATGCAGAGGTG
GATTTACTTGCTCCAATCCTTCATGTCCTTATGTTAAAAAGTTTGGAAAA
TCAAATACTGTTTCGTTTGATAAAAATCATTATTGTAAATTCTGTCAAGC
ATCTGGGATTTACGAAAGGTGCGAAGCAAGGAAATATATAGCCTATACAC
ACAATCCTAATGAAGCTTATGTGTACCACTATGGCTTCCATACTTGTGTA
CCAAAAGAAATCCATCAGGCTCCTATCAGCGAAATCGTACGCGAAGTTCA
AAACAACCCATCTGTTCGACCTACTGAAATCCAGACAAATTTGATTCTTT
CAGCTATCCGGAATAGAGATTCCTGGGATGAAATCATGCGTACCGCGGCA
CAAGTGGCAGATACAAGAAAAATTTCTAACGAGAAATCAAAGCAGAAGAA
GGTTGTTTATCCTTtaggtgaaaatttcaagggTGTATCTGATTTGAAAG
AATTCACCGACACAAAGGACAAATTTTTGATATACGATATCAACCGAAAA
AAACAATACATTTTCAAAAGATCAATGGATTCTTTGAAAATTGCAAAAGA
TATGTGCGAATTAGACAACGTTTTGGAGAATGAGTATTGGCAATCACAAG
AGAACTCTGAATTCTATAACCCTAACCGCAAGTACATCTCACCCACTGCT
GAAAAGACAAGTGCCGCTTGCTTCGATGCAGTGTAAAACGGTATTAACTT
CATTTCGCatctttattttaatttttctttcagttctGGCACAGAACCAC
AATTTCCTTGCGATGATCAAATAGTCGATGTACCTGGTGATGGGCATTGT
TTAATATACGCGTGGGAGCTCTGTCTACATGCCAGCTCCCAAAATGACAT
CTCATATATGAGTCTCAAAGATATGCTCGAGAGAGAACTCAAATCTAATA
AAGAGACATacatgaaatttttgatgaaagcttcaaaaattgatTATGAT
ATAAATGTATTGAAATACATTTACAAGAAAACCTCCAACAACGATCTATG
TGACATTCTGATATTGGCTCTCAGTAATGCTACCTCACTCTCGTGCATGA
TATGGGAAGAAAGGAACAGACGTTTCACAAGAGCACACACGATATTCCCC
ATCTCTGGATCTTCCAATGACAGAATACATGTTCTCAAACGCAACGATCA
TTATTTGGCCATCGTGGACACAAACAATAAAGACGATGATGTTATAATTG
TGCGAGAGGTAAAACCGTTGAAGATTGATGATGAAATCGAAATCACCAAA
GAAGTTCCAGCTaatcctgaaaataaaaatagaatcgGCAATTCCATCAA
AACCGgTTATGGCAAGAAGTTTCAAggtgaaaagaaaagaacgacCACTG
TGCTGCCTGAGCCAAATCCTATAAAGATCGAAGTCGAAATTCCGAAAGAA
GAAGAACTATCTGACTCTGAATTACCTTCATTTCCACAACCGTATTCTCC
ATCGACCTATTTTCcagaggaagaagaagaagaagaaacagaAAGTCAAG
AAGCTATTTCGGAAACAGTCCAGCCtaagtttcaaagaaaaattccGCGG
ATAATTTGGGAAGGAAAGTCAGTAAATGAGGTACCAAACATTCCTTACGA
CATTGATGACATAAAGGTTTACCATGTCCAAAGCTCTGATGGTCTTTTAC
CGCAAAAATTGAGAGACGGTAGGAATTGGAAGCCTGATTCCAGAACAAGT
TGGGCTGGCTATAAGTCCGTTCGATATCGTGAATGCAGAGGTGGATTTAC
TTGCTCCAATCCTTCATGTCCTTATGTTAAAAAGTTTGGAAAATCAAATA
CTGTTTCGTTTGATAAAAATCATTATTGTAAATTCTGTCAAGCATCTGGG
ATTTACGAAAGGTGCGAAGCAAGGAAATATATAGCCTATACACACAATCC
TAATGAAGCTTATGTGTACCACTATGGCTTCCATACTTGTGTACCAAAAG
AAATCCATCAGGCTCCTATCAGCGAAATCGTACGCGAAGTTCAAAACAAC
CCATCTGTTCGACCTACTGAAATCCAGACAAATTTGATTCTTTCAGCTAT
CCGGAATAGAGATTCCTGGGATGAAATCATGCGTACCGCGGCACAAGTGG
CAGATACAAGAAAAATTTCTAACGAGAAATCAAAGCAGAAGAAGGTTGTT
TATCCTTtaggtgaaaatttcaagggTGTATCTGATTTGAAAGAATTCAC
CGACACAAAGGACAAATTTTTGATATACGATATCAACCGAAAAAAACAAT
ACATTTTCAAAAGATCAATGGATTCTTTGAAAATTGCAAAAGATATGTGC
GAATTAGACAACGTTTTGGAGAATGAGTATTGGCAATCACAAGAGAACTC
TGAATTCTATAACCCTAACCGCAAGTACATCTCACCCACTGCTGAAAAGA
CAAGTGCCGCTTGCTTCGATGCAGTGTAAAACGGTATTAACTTCATTTCG
CatctttattttaatttttctttcagttctGGCACAGAACCACAATTTCC
TTGCGATGATCAAATAGTCGATGTACCTGGTGATGGGCATTGTTTAATAT
ACGCGTGGGAGCTCTGTCTACATGCCAGCTCCCAAAATGACATCTCATAT
ATGAGTCTCAAAGATATGCTCGAGAGAGAACTCAAATCTAATAAAGAGAC
ATacatgaaatttttgatgaaagcttcaaaaattgatTATGATATAAATG
TATTGAAATACATTTACAAGAAAACCTCCAACAACGATCTATGTGACATT
CTGATATTGGCTCTCAGTAATGCTACCTCACTCTCGTGCATGATATGGGA
AGAAAGGAACAGACGTTTCACAAGAGCACACACGATATTCCCCATCTCTG
GATCTTCCAATGACAGAATACATGTTCTCAAACGCAACGATCATTATTTG
GCCATCGTGGACACAAACAATAAAGACGATGATGTTATAATTGTGCGAGA
GGTAAAACCGTTGAAGATTGATGATGAAATCGAAATCACCAAAGAAGTTC
CAGCTaatcctgaaaataaaaatagaatcgGCAATTCCATCAAAACCGgT
TATGGCAAGAAGTTTCAAggtgaaaagaaaagaacgacCACTGTGCTGCC
TGAGCCAAATCCTATAAAGATCGAAGTCGAAATTCCGAAAGAAGAAGAAC
TATCTGACTCTGAATTACCTTCATTTCCACAACCGTATTCTCCATCGACC
TATTTTCcagaggaagaagaagaagaagaaacagaAAGTCAAGAAGCTAT
TTCGGAAACAGTCCAGCCtaagtttcaaagaaaaattccGCGGATAATTT
GGGAAGGAAAGTCAGTAAATGAGGTACCAAACATTCCTTACGACATTGAT
GACATAAAGGTTTACCATGTCCAAAGCTCTGATGGTCTTTTACCGCAAAA
ATTGAGAGACGGTAGGAATTGGAAGCCTGATTCCAGAACAAGTTGGGCTG
GCTATAAGTCCGTTCGATATCGTGAATGCAGAGGTGGATTTACTTGCTCC
AATCCTTCATGTCCTTATGTTAAAAAGTTTGGAAAATCAAATACTGTTTC
GTTTGATAAAAATCATTATTGTAAATTCTGTCAAGCATCTGGGATTTACG
AAAGGTGCGAAGCAAGGAAATATATAGCCTATACACACAATCCTAATGAA
GCTTATGTGTACCACTATGGCTTCCATACTTGTGTACCAAAAGAAATCCA
TCAGGCTCCTATCAGCGAAATCGTACGCGAAGTTCAAAACAACCCATCTG
TTCGACCTACTGAAATCCAGACAAATTTGATTCTTTCAGCTATCCGGAAT
AGAGATTCCTGGGATGAAATCATGCGTACCGCGGCACAAGTGGCAGATAC
AAGAAAAATTTCTAACGAGAAATCAAAGCAGAAGAAGGTTGTTTATCCTT
taggtgaaaatttcaagggTGTATCTGATTTGAAAGAATTCACCGACACA
AAGGACAAATTTTTGATATACGATATCAACCGAAAAAAACAATACATTTT
CAAAAGATCAATGGATTCTTTGAAAATTGCAAAAGATATGTGCGAATTAG
ACAACGTTTTGGAGAATGAGTATTGGCAATCACAAGAGAACTCTGAATTC
TATAACCCTAACCGCAAGTACATCTCACCCACTGCTGAAAAGACAAGTGC
CGCTTGCTTCGATGCAGTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008573XLOC_008573Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015323-exon-sc0000210-1491911889:222383..222878TCONS_00015323-exon-sc0000210-1491911889:222383..222878Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1510915933:222383..222878TCONS_00015323-exon-sc0000210-1510915933:222383..222878Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1575043694:222383..222878TCONS_00015323-exon-sc0000210-1575043694:222383..222878Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1491911889:225032..225154TCONS_00015323-exon-sc0000210-1491911889:225032..225154Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1510915933:225032..225154TCONS_00015323-exon-sc0000210-1510915933:225032..225154Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1575043694:225032..225154TCONS_00015323-exon-sc0000210-1575043694:225032..225154Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1491911889:228504..228563TCONS_00015323-exon-sc0000210-1491911889:228504..228563Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1510915933:228504..228563TCONS_00015323-exon-sc0000210-1510915933:228504..228563Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1575043694:228504..228563TCONS_00015323-exon-sc0000210-1575043694:228504..228563Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1491911889:229131..231087TCONS_00015323-exon-sc0000210-1491911889:229131..231087Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1510915933:229131..231087TCONS_00015323-exon-sc0000210-1510915933:229131..231087Clytia hemisphaericaexon
TCONS_00015323-exon-sc0000210-1575043694:229131..231087TCONS_00015323-exon-sc0000210-1575043694:229131..231087Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015323-proteinTCONS_00015323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:222383..231087 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19362	0	0.738965	0.873321	1.87675	0	0	1.47938	0.867956	0.740581	0	0	0.471855	0.728885	0.805539	0.958648	2.07678	1.37568	0.670106	1.07242	1.83827	1.46739	0.853395	0	0.761818	1.35905	1.2214	1.18604	0.747216	0.79379
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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