XLOC_008573 (gene) - C. hemisphaerica

Overview
NameXLOC_008573
Unique NameXLOC_008573
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000210:222383..231087+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008573 ID=XLOC_008573|Name=XLOC_008573|organism=Clytia hemisphaerica|type=gene|length=8705bp|location=Sequence derived from alignment at sc0000210:222383..231087+ (Clytia hemisphaerica)
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGGTGA AACTCGTTTTAGCTTTTAAACAACTTTAGACACTTTTGTTTTGAATCGAA TTTTTAGAACAAAAATTTAGATTATGTAATAAGACAAGCCATTGGTCCAG CAataaattttaaggtttttagaAGAAAACTACGTAGAGGCGTAAAAATA TTATAACTTGATTAAATTAGTGTATCGGTGCAGTATAGATGGTAGTAAAA TGATTCTTCCCTATACGAATAGATTTTGCTAAATCAACTTTTATGTTATA CATTTCAGTGTCGTAGGAAGCCTTTTGATTTTcttggggggagggggtga aaGTTAGTGACACCTCAAAGGCCAACTGTTGTTCAGAACGAAGAGCGAGG AAATTCTGAATATTCACGGTCCTAGAATGCCAGAAATCttactcaaaaaa tgaaaaagatgaaaaattcaaaGGAATATTACTCCAATTCTCACAGTAAA ACAtctccaaaaaaattatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAGTATA TCAACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagt tatGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACC TGGTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCA GCTCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGA GAACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttc aaaaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCT CCAACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACC TCACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGC ACACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTC TCAAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGGT GAAACTCGTTTTAGCTTTTAAACAACTTTAGACACTTTTGTTTTGAATCG AATTTTTAGAACAAAAATTTAGATTATGTAATAAGACAAGCCATTGATCC AGCAataaattttaaggtttttagaAGAAAACTACGTAGAGGCGTAAAAA TATTATAACTTGATTAAATTAGTGTATCGGTGCAGTATAGCTGGTAGTAA AATGATTCTTCCCTATACGAATAGATTTTGCTAAATCAACTTTTATGTTA TACATTTCAGTGTCGTAGGAAGCCTTTTGATTTTcttggggggagggggt gaaaGTTAGTGACACCTCAAAGGCCAACTGTTGTTCAGAACGAAGAGCGA GGAAATTCTGAATATTCACGGTCCTAGAATGCCAGAAATCttactcaaaa aatgaaaaagatgaaaaattcaaaGGAATATTACTCCAATTCTCACAGTA AAACAtctccaaaaaaattatttNTTTGTTTGGTCACGTGATCTCGTATT CTTTTTGTAATTGGTCTTTGAAACTTGAACGCCACGTGGGTCTCTATCGG AAAATATTAGTGAGAAAGTGGGGCACCCCGCGGTGCAGCGTGGTATTTCA AATGGAAAAGTGctaactagaactagaactttATAAAGACATTTCTTATA ATTTTAGTAATAATGACAatggttttcaactttttaaattgtCTTTCACG AATGTTTTACAGAGTCTCTTGATAATCGACAGTCTTTAATCGTGAAGGAT ATTTGCAGCAGAAAAATCATTGGATAAGAAGAAATCCAAATTTACGGGTT TGCAATTAAAGAAGTTAAACTTCACATCAACTTTTAATGTTAGGGTACAG AGATAGAGCAAGGTATTTTTCAATGTGCTTTATCCAGCTTCGCTATTACA TATCCCTGCCTCgatcaacaaattttttttgaatgtttttttcatttagg ATGAAAGCTTTTCGAGGCAAAATTCGAAGTGTTTAAAATATGTTTTGCGA GAATTTTATGAATTCAAGCTAATTTATGTATCTGATTTCTTAATAGAAGA CGATGATGTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATG AAATCGAAATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaaataga atcgGCAATTCCATCAAAACCGGTAAATTCTATACTATACATTTTATATA GAATTGTTTTTATTCATACTTTAAATTTAAATATTCCTTGAGCTTTTTTG GGCCCCTTCAGGCCCACGTGTTTTAGGCAGGGCAGTGTGGTGTGTAGTGA TGTGGCTTTAAGTCAATCTTTTTCTAATTCTAATAGCTAGAGGACATAAT CTAGTGTAGCTGAACCaaggtttttttatattttcgttcactcaatgtca aaaaagtgaattttgggcattttttttGATACtgtaaaagaaattatttc aaaatcttttgtgtTACAACTTAATGGGCGTTTTATTTCAGTCAACTCAG GGGGCTACGCCCTCCTGTATGGTCCTTGTCAGATATAatcgacattggca cttaaagtgTTAAAAGAAAGTTAAGTGTAAACTTCCTTAACCTGAGTATC AGAGGACAAGTTTTCTGTGAAAATATTGACCTCTGACGACAAATGCTATG ATTTTCATCGCGCATGCCCGAACCATTTGCAAAATCTAATTGTTATCATG TCAAAGAACTACCTAAGAATTATGGGATGGAGAGAAttcatacacccctg tctcagtgacctggTGGGAATTTTTTTGCTAGTGGGGATAAATAAAGAGA CATAAAATCCAATGGGGTTAtcaaaaacgggtttttttccactggggata cgaaattctattgttctttatTCGAAATATTGGTGGGGATGAGACATTTA AGTCGATCagaatttagtttttttacgATTTTCAATAGGGATGGGCCTTT TTCTAGTGGGGACGAATTTCTATGCTATTTTTCCGCCGGTGATGACTTTT TGGGCCTGTATTTCCAGTGGGTAGGGGGTCCCACCGGttctgtgaaacag gggtgtattcaTTGCCTTTACTTGCTACAGTCTTATTTAGCAAATAATAA ACCTTGTGCTCAGAACTAAAAGAATTACACCATTAGAAAGCTTNAATATT CCTTGAGCTTTTTTGGGCCCCTTCAGGCCCACGTGTTTTAGGCAGGGCAG TGTGGTGTGTAGTGATGTGGCTTTAAGTCAATCTTTTTCTAATTCTAATA GCTAGAGGACATAATCTAGTGTAGCTGAACCaaggtttttttatattttc gttcactcaatgtcaaaaaagtgaattttgggcattttttttGATACtgt aaaagaaattatttcaaaatcttttgtgtTACAACTTAATGGGCGTTTTA TTTCAGTCAACTCAGGGGGCTACGCCCTCCTGTATGGTCCTTGTCAGATA TAatcgacattggcacttaaagtgTTAAAAGAAAGTTAAGTGTAAACTTC CTTAACCTGAGTATCAGAGGACAAGTTTTCTGTGAAAATATTGACCTCTG ACGACAAATGCTATGATTTTCATCGCGCATGCCCGAACCATTTGCAAAAT CTAATTGTTATCATGTCAAAGAACTACCTAAGAATTATGGGATGGAGAGA AttcatacacccctgtctcagtgacctggTGGGAATTTTTTTGCTAGTGG GGATAAATAAAGAGACATAAAATCCAATGGGGTTAtcaaaaacgggtttt tttccactggggatacgaaattctattgttctttatTCGAAATATTGGTG GGGATGAGACATTTAAGTCGATCagaatttagtttttttacgattttcaa tggggatgggCCTTTTTCTAGTGGGGACGAATTTCTATGCTATTTTTCCG CCGGTGATGACTTTTTGGGCCTGTATTTCCAGTGGGTAGGGGGTCCCACC GGttctgtgaaacaggggtgtattcaTTGCCTTTACTTGCTACAGTCTTA TTTAGCAAATAATAAACCTTGTGCTCAGAACTAAAAGAATTACACCATTA GAAAgctcttgattttctaaaaattatgaTATAAAAATCGCATCTTGAAC AAAACAAAAGACTTGACATTATTTTCTTAAAGCTTTCGGTCGTGTTCAGa tctgaaagtttaagtttaaggtttaagtagtactttgttgatatgggaat tcaattataatcacttttcttttgtcatcatcgattggcgatctcgagga atctcctttcctaacttgaaCGTTATATGTATGAAATAAAGACCTTTCTT AATTCCCTTGGGAATATGTTTTTTCATACCAAGAGCCTTTAACCTGATTG GCCTTATGGGAGTATATGTGCAAGAAAAACATATATGCCATTCTCAAACT Aagaaactaaagtctgtccagatataattggcagtggaaacaagaatgcc tgtaacttttgatagtcaaatataattatagaaattttttttgcttgttt tagagaatcaaaagcgctatatttgattgtattcttggtttaaaaatttc aagatttttagcggttaaatttgcgattgcaaaaattgagctttttatct acttatgctataactttcatttttacatcaATGGCAGTTCAACCTTagat taagaagtttgttaaatttcaaggcaaacagaaaagtccttcggaagata tgggacccgaaataccccttggtagcacttttctgtgaaatatcaaatct ccaacttattgctaaaaaacgggggtagtgatatcattgatataacagtt tttggatcataacacattttatgatctttttaatgacctcatagccaaac tgtgtttagtgttttgggaattagcaaacttctttaatgactttaaaata acaaaggcaatataagttcatgcttatcttttcaataaaaacaattatac tgtgatttcacttcgtttcgaaataatcaatgataccaataataccaaNN caaatttaacaaacttcttaatctaaggttgaactaccactggtgtaaaa atgaaaattatagcataagtaggaaaaaagctcaatttttgcaatcgcaa atttaaccgctaaagatcgcgaatttttcaaccaaaaatacattcaaata tagcactattgattctctaaaacaagcaaaaacaatttccatgattatat ttgactatcaaaagttacaggcattcttgtttccactgccaattatatct ggacagactttagataCTACTATCTCTATTTTCTCGCGTATTTTGTTATA ACGTATTTTTCGTCCCTTAAGGGTGTATTGGCTTATATCTCTTTATAGAA ATTACTTTTAGCTGGCTCAAGTTTACTTCCATTTtaacaagaagaaaaat cagCAAATCCTGGGTCGAACTGGGtttttttaaactgtttttttttaaga gcgAAGCGATGTCGCGCCAGCGGCATGCGACGCTGGCTTGCCAGCTAGTA CataataattttcttatttaggTTATGGCAAGAAGTTTCAAggtgaaaag aaaagaacgacCACTGTGCTGCCTGAGCCAAGCAAGTTTTTCATAttaca ttttcatattttgaccaTTAGTAAACCTAGAATTACTTCGGGAAATGAGG ATTCAGAGTGACTCTTAAGAGACTTTTATGGACTTTTAAGGCgaacccaa aaaattttttgtttccggtccaccgggtgacgaaaaaagaCACTCTCTCG GCCGgccgcgaaaaatttttttgtgctaaatttcgatcccaaaactcgat tttttaaagcactcgtaGAAGTTAAAAGGATGGTATTTTTTTGCCTTAAA TCTGCAGTAATTTGACACCAAAATGCAAATTTTGTAAGAAAAACTTTGAG TACGATGTCAAAATAATATTCTAATAATTGCCTGAAAGAGGGCCGGAAAT TTCTGGGTTTTGATACTTTTAAGATCGGCCTGTAAAACTCCTATtgtttt tgacttgaaattttgagctattgTATTATAGGTATAATTTAAATTTACCA AATGTTCAACTTTTActggtaaattttcaaacagcTCGAAGTCCATCGTG ggataaatttgtctttgtaatCAATCATTACCTCTAATCTCTCCATAGAT CCTATAAAGATCGAAGTCGAAATTCCGAAAGAAGAAGAACTATCTGACTC TGAATTACCTTCATTTCCACAACCGTATTCTCCATCGACCTATTTTCcag aggaagaagaagaagaagaaacagaAAGTCAAGAAGCTATTTCGGAAACA GTCCAGCCtaagtttcaaagaaaaattccGCGGATAATTTGGGAAGGAAA GTCAGTAAATGAGGTACCAAACATTCCTTACGACATTGATGACATAAAGG TTTACCATGTCCAAAGCTCTGATGGTCTTTTACCGCAAAAATTGAGAGAC GGTAGGAATTGGAAGCCTGATTCCAGAACAAGTTGGGCTGGCTATAAGTC CGTTCGATATCGTGAATGCAGAGGTGGATTTACTTGCTCCAATCCTTCAT GTCCTTATGTTAAAAAGTTTGGAAAATCAAATACTGTTTCGTTTGATAAA AATCATTATTGTAAATTCTGTCAAGCATCTGGGATTTACGAAAGGTGCGA AGCAAGGAAATATATAGCCTATACACACAATCCTAATGAAGCTTATGTGT ACCACTATGGCTTCCATACTTGTGTACCAAAAGAAATCCATCAGGCTCCT ATCAGCGAAATCGTACGCGAAGTTCAAAACAACCCATCTGTTCGACCTAC TGAAATCCAGACAAATTTGATTCTTTCAGCTATCCGGAATAGAGATTCCT GGGATGAAATCATGCGTACCGCGGCACAAGTGGCAGATACAAGAAAAATT TCTAACGAGAAATCAAAGCAGAAGAAGGTTGTTTATCCTTtaggtgaaaa tttcaagggTGTATCTGATTTGAAAGAATTCACCGACACAAAGGACAAAT TTTTGATATACGATATCAACCGAAAAAAACAATACATTTTCAAAAGATCA ATGGATTCTTTGAAAATTGCAAAAGATATGTGCGAATTAGACAACGTTTT GGAGAATGAGTATTGGCAATCACAAGAGAACTCTGAATTCTATAACCCTA ACCGCAAGTACATCTCACCCACTGCTGAAAAGACAAGTGCCGCTTGCTTC GATGCAGTGTAATCATGAGGACGGCGAAACAGTTGAGACATTTTGGAGAG TGTGCAATAAAGCCTACAAAGAGGCAAACAGTTGCACTAACCGTTTCGAG CCCTCTGGATGGGTGACAGATATGGCGACAGCGAATTTTAACGGGTTGTC GAAAATGTATGGTGAAGATGTGCTTGAAAAAGTAAAGGGTTGTGAATTCC ACTACAAACAATCAGTAGAAAAGAAAGCAAAGACTTTAGGCGAAAAAGGA GACGAATTTCGCGCAAAGTCTTTAGAGCTATTGGAAGCGGCAACTGAAGA GGCATACACAGCCTTACATAGAGAACTTGAATCTTTTATATCAGGTATTG TTTTACTCGCTTTGCTACTCCTTCAAACGAAGaaactttcgaaaatttga caaaacacGAAAGTTTCtttccgcgaaagtttcttcgataaagggctctg accatagtgaaaaatcgtttttggaatttgaagataaaaccttttgTTTT CACCTACttaacattttaaaaaaagactcagtttgaaaaatcttgtttAA ATATCATAGTAGTGTTAgttaaattttttctgaaaatctttcTCATTCAA TGTGTAAAAAAGTAATGATTGGTTTtatcagagatttgggaaaggAAGAT AGGTATCGGCGTATTCATGTATAGAAATATGTACTGTTATAGTCTTTTGT TTCTTTTGAAATCATTCAAATATAACTACTATAACAACCTTTTCTGCCAA TCAGAGTAAGGAATTATAAAACCTCTTTGCCAAATCTTTTGAGCCCGTGC CGAGAAAAACTGACTCTACCAACAGAATCCTGGTAATATTCGAATATTTT CTACCTGGAAAAATTTACATTTGACTTCCAAAAATTCTTGCTGCTAAGAT ATTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015323TCONS_00015323Clytia hemisphaericatranscript
TCONS_00015324TCONS_00015324Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015323-proteinTCONS_00015323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:222383..231087 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19 1.05 0.74 0.87 1.88 1.59 1.49 1.48 0.87 1.12 0.67 0.46 0.65 0.73 1.02 0.96 2.08 1.38 0.67 1.07 1.84 1.47 0.85 1.01 1.85 1.72 1.22 1.19 0.76 0.88