TCONS_00015168 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015168
Unique NameTCONS_00015168
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015168 ID=TCONS_00015168|Name=TCONS_00015168|organism=Clytia hemisphaerica|type=transcript|length=1408bp
AGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGT
AGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGA
AGAACGAATTTACTGAGtaTTATGATCCGACCATGGAGGAAACTTATGAA
ACAGAGATCACTTACGAGGGAAAACTCCACCAGGTGGAGATTATCGATAC
AGCAGGTCAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCTCTACCG
GCGATGCGTTTATGATTTTGTACGCCATCAATTCATTGTCCAGTTGGAAC
GACTTGAAGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAA
TGCGGGACACAGGATACCTATGATCATTGTCGGTAATAAAAAGGATTTGG
ACAACGATCGAGACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCG
TTGCGTGTCCCATACATTGAAACATCCGCTAAGACGGGATACAACGTCAA
AGAAGCTTTCCATCTTATCATGTCGGAGATTGAACGAATACGTCCCGACC
TGTTAGTGAAACGGACCAAGAACAGACCGTCGACGAGTAGCGATCCGAAG
AAAAAAGACTGTAGGATTGTTTAAccatttattcatgatatgtagGAGAT
AANCGAAGAAAAAAGACTGTAGGATTGTTTAAccatctattcatgatatg
tagGAGATAATAGACCCTTTATGGAATCTTTAAATACATGTTTGATTATG
GTGGTGATAATGGTTTATTTGACGAATTATTATGGAGGTAATAAAGGATG
ATATCAGCTGAATTCCATAGTAAAGAGTTCGGCTTTTTAAAAGTTCTGAG
ACAAAGACAAAGTTCTGTTGGTTGGACCAACTTATTTATGGGGTGTTGTC
AATGTCCGCAATACCCTCAAGTGTAAATAAAGCTTCTCTATCCAATACAT
AATTAGAAAAAATAGTGGTTGCTTATATTttatcaatgaaaaaaattgaa
cccATCCCGTTCCTCGTTTGCGCgtgaaaaatgagaaatattCTGCATTT
TGACGGTATTGTGGATGAGGGAATTGATCTCTTGTGAGATACAAGATAcg
gtggagtctccataactcgaacctctatagctcgaatgtctccttgaCTT
GAACGAGTTTTCTGTTCCGTTTAGTTAACAATGCttcataaaccttactc
cataactcgataTTACCTTATAGTTAAATCGAACATACATATTTTTTTGA
TAagctactttaggcgtacaaactttcacgagcagaaactttcgcgattt
tcgcgaatttgtgcgaattttagcccttttcgcgaaagtaaatgtctttg
aaaattcttgagagggcaattcgcgaaagtttatgctcgcgaaaaaaaat
ctgcaaaG
Run BLAST on NCBI

protein sequence of TCONS_00015168-protein

>TCONS_00015168-protein ID=TCONS_00015168-protein|Name=TCONS_00015168-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
RRSVICPSAAQMLRICVVGSGGVGKSCVTIRFLKNEFTEYYDPTMEETYE
TEITYEGKLHQVEIIDTAGQEEFTSFLDSSLSTGDAFMILYAINSLSSWN
DLKTLRSKIFHGSEGKNAGHRIPMIIVGNKKDLDNDRDTSEESAQEYADS
LRVPYIETSAKTGYNVKEAFHLIMSEIERIRPDLLVKRTKNRPSTSSDPK
KKDCRIV
Run BLAST on NCBI

transcript from alignment at sc0000205:10422..14507+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015168 ID=TCONS_00015168|Name=TCONS_00015168|organism=Clytia hemisphaerica|type=transcript|length=4086bp|location=Sequence derived from alignment at sc0000205:10422..14507+ (Clytia hemisphaerica)
AGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGT
AGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGA
AGAACGAATTTACTGAGGTAtgtattgaaagtttgtggATACATTGTAAA
GAGATACTTTTCATAAATATCAAATCTGGGTTTGTGTTAAGATGTAAAAT
TTATACCGGGTGCGATATTTGACGTttttgaaagtaactttttaattcat
tttaatATAAGTTTTGTTCCAATGAACCAAATTTATTAAAGACCCATCAA
AGTTTTAGTTTATCCTTTCTCTTTCCGAGagaaaatgattcaatttttaa
aactcTAGAAGTCAAGACAATTTACTTCAGAAAggtaaactttttgtttt
ttgtggcgcacccggtatccCATTTTTTGAACAATCATAACCCTATAAAA
cgattttagaaaattacaTGCTTTAGATTTCAAAGATATGAAGCTCATTT
TCATCTCCTCATATAATATATCATAATCATAAGCCAAAATTTACTAATTC
TTACAAAATCTTTgtatattcttttctttttctttagtaTTATGATCCGA
CCATGGAGGAAACTTATGAAACAGAGGTATGTTTTTGATGAGACACCTGA
CTTTCTGTCTTGCCTACtcttattttgtattttttataagcaactcaaAT
TTTCGGTTCAAGcctggggttgcttagcattctagtccaactttaaaaaa
attgctttgaccACCATTGATGTTATACcatatttttgcattttaggGCT
ATTGTTTGCCATGTTAGATTCTGTAAAGAGCTTTCACTTTACGAGAGAGT
GGGGGAAAAATCGGCCAATTGGATGCCTCGAACCTTAGCAACCTTtggtt
ttaaagaaatttgtacTCTAGTATCTTTCTAACATTTCAGATCACTTACG
AGGGAAAACTCCACCAGGTGGAGATTATCGATACAGCAGGTCAGGAGGAG
TTCACTTCATTTTTGGACTCTTCGCTCTCTACCGGCGATGCGTTTATGAT
TTTGTACGCCATCAATTCATTGTCCAGTTGGAACGACTTGAAGACTCTGA
GGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAATGCGGGACACAGGATA
CCTATGATCATTGTCGGTAATAAAAAGGTAacgaacattttgaaaaaaaa
tgctaTATCATGTGGAAACCACGCCTTAATTTTTGCATAAATATTGGCAT
AATTTTTCgctcctttgttcttataaaactaaTCTACTCTTGCAGAATGT
ATGTATTCTGATCAAGATTAAAGTTCAATAAGAAAAGACTTGAACCATTA
TTTTATTAGTCAATTCTCAAATTTGAGACtcatattgggctcttccaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG
TTGTTTccggagaaaatattttttcatgaatagcACGAATTGCTCCCAAT
TTGTTCTTAATCATTAGTCAGAAATGAGCCACATGAAGCTGCTCTTATAA
AAATGATGTATATTTCACTTATCTTTCAGGATTTGGACAACGATCGAGAC
ACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTTGCGTGTCCCATA
CATTGAAACATCCGCTAAGGTCTGTTGTTAAAGTGTATCTAGATacaatt
ggcagtggaaacaagaatgcctgtaacttttgttAGTCAAATATAGTTAT
GCTACGACGTTTGTTTTTAcatcagtggtagttcaaccttaggttaagaa
gtttgttaaatttcaaggcaaacggaaaagtccttcggaagatatggtaC
CCTTTTCTGTGAAACTCCAAATCTCCAGATTTTTAATaaattgttgattt
tttaaaacATGCAAAAAGGATTTCcacaattatatttgactaacagaagt
tacaggcattcttgtttccactgccaattgtATGTTGATACACTTTAGTT
TGACTTATTCGTGAGATGATCCCCAATACCGACCTTTCAGATCTTAAAGG
ggtaatcagatggtttgagatttttggcCTGCGGAAACTTTCCTAATAGC
GCTGACTCATTCCTATAAGCATTTTTGCCTGTTTTTGCCTTacttttttc
caaattcgaGACATCGCAATTTAAAAGTTCTGAACTAAATAAGTTCGCAC
ATGGCTCTTACGTCAAAATTGCCGTTGCTTCTTtactaaaaagtcaaaaa
cttgttATATCtatttaggcaaaaatattttgaggttttgctcGGGACAA
TAGAAGGTTTCCACAAACCAAATATCTTAAACTACCTGTTTTAAAAGTGG
TTAAAAGTTAACTTAACTCTATAAAGACTTCAAAGAGTAACTCTAAAGTT
AAGCATGTCTCGGTAAAAATAACGAAAACATTTGAACCGTCGCAATATTT
ATTCTTTCAGATACACCCTTTTTTAATTCCGAATCTTATACTCAGAATCA
gcttatttaaaatattttccttgtTTCCTTGTTTGCTTTCAACTCCATTC
TGGATGTatcttgttggaaagataattttgagcgaagaaatattatattt
ttctctctTAGACGGGATACAACGTCAAAGAAGCTTTCCATCTTATCATG
TCGGAGATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACCAAGAA
CAGACCGTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGATTGTTT
AAccatttattcatgatatgtagGAGATAANCGAAGAAAAAAGACTGTAG
GATTGTTTAAccatctattcatgatatgtagGAGATAATAGACCCTTTAT
GGAATCTTTAAATACATGTTTGATTATGGTGGTGATAATGGTTTATTTGA
CGAATTATTATGGAGGTAATAAAGGATGATATCAGCTGAATTCCATAGTA
AAGAGTTCGGCTTTTTAAAAGTTCTGAGACAAAGACAAAGTTCTGTTGGT
TGGACCAACTTATTTATGGGGTGTTGTCAATGTCCGCAATACCCTCAAGT
GTAAATAAAGCTTCTCTATCCAATACATAATTAGAAAAAATAGTGGTTGC
TTATATTttatcaatgaaaaaaattgaacccATCCCGTTCCTCGTTTGCG
CgtgaaaaatgagaaatattCTGCATTTTGACGGTATTGTGGATGAGGGA
ATTGATCTCTTGTGAGATACAAGATAcggtggagtctccataactcgaac
ctctatagctcgaatgtctccttgaCTTGAACGAGTTTTCTGTTCCGTTT
AGTTAACAATGCttcataaaccttactccataactcgataTTACCTTATA
GTTAAATCGAACATACATATTTTTTTGATAagctactttaggcgtacaaa
ctttcacgagcagaaactttcgcgattttcgcgaatttgtgcgaatttta
gcccttttcgcgaaagtaaatgtctttgaaaattcttgagagggcaattc
gcgaaagtttatgctcgcgaaaaaaaatctgcaaaG

Coding sequence (CDS) from alignment at sc0000205:10422..14507+

>TCONS_00015168 ID=TCONS_00015168|Name=TCONS_00015168|organism=Clytia hemisphaerica|type=CDS|length=3120bp|location=Sequence derived from alignment at sc0000205:10422..14507+ (Clytia hemisphaerica)
AGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGT
AGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGA
AGAACGAATTTACTGAGtaTTATGATCCGACCATGGAGGAAACTTATGAA
ACAGAGATCACTTACGAGGGAAAACTCCACCAGGTGGAGATTATCGATAC
AGCAGGTCAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCTCTACCG
GCGATGCGTTTATGATTTTGTACGCCATCAATTCATTGTCCAGTTGGAAC
GACTTGAAGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAA
TGCGGGACACAGGATACCTATGATCATTGTCGGTAATAAAAAGGATTTGG
ACAACGATCGAGACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCG
TTGCGTGTCCCATACATTGAAACATCCGCTAAGACGGGATACAACGTCAA
AGAAGCTTTCCATCTTATCATGTCGGAGATTGAACGAATACGTCCCGACC
TGTTAGTGAAACGGACCAAGAACAGACCGTCGACGAGTAGCGATCCGAAG
AAAAAAGACTGTAGGATTGTTTAAAGAAGAAGTGTCATCTGCCCTTCTGC
CGCCCAAATGTTACGAATATGCGTAGTGGGATCTGGGGGCGTGGGAAAGA
GTTGCGTCACTATACGCTTCCTGAAGAACGAATTTACTGAGtaTTATGAT
CCGACCATGGAGGAAACTTATGAAACAGAGATCACTTACGAGGGAAAACT
CCACCAGGTGGAGATTATCGATACAGCAGGTCAGGAGGAGTTCACTTCAT
TTTTGGACTCTTCGCTCTCTACCGGCGATGCGTTTATGATTTTGTACGCC
ATCAATTCATTGTCCAGTTGGAACGACTTGAAGACTCTGAGGAGTAAGAT
TTTCCACGGTTCGGAGGGCAAGAATGCGGGACACAGGATACCTATGATCA
TTGTCGGTAATAAAAAGGATTTGGACAACGATCGAGACACGAGTGAGGAA
AGTGCTCAAGAGTACGCCGACTCGTTGCGTGTCCCATACATTGAAACATC
CGCTAAGACGGGATACAACGTCAAAGAAGCTTTCCATCTTATCATGTCGG
AGATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACCAAGAACAGA
CCGTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGATTGTTTAAAG
AAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGTAG
TGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGAAG
AACGAATTTACTGAGtaTTATGATCCGACCATGGAGGAAACTTATGAAAC
AGAGATCACTTACGAGGGAAAACTCCACCAGGTGGAGATTATCGATACAG
CAGGTCAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCTCTACCGGC
GATGCGTTTATGATTTTGTACGCCATCAATTCATTGTCCAGTTGGAACGA
CTTGAAGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAATG
CGGGACACAGGATACCTATGATCATTGTCGGTAATAAAAAGGATTTGGAC
AACGATCGAGACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTT
GCGTGTCCCATACATTGAAACATCCGCTAAGACGGGATACAACGTCAAAG
AAGCTTTCCATCTTATCATGTCGGAGATTGAACGAATACGTCCCGACCTG
TTAGTGAAACGGACCAAGAACAGACCGTCGACGAGTAGCGATCCGAAGAA
AAAAGACTGTAGGATTGTTTAAAGAAGAAGTGTCATCTGCCCTTCTGCCG
CCCAAATGTTACGAATATGCGTAGTGGGATCTGGGGGCGTGGGAAAGAGT
TGCGTCACTATACGCTTCCTGAAGAACGAATTTACTGAGtaTTATGATCC
GACCATGGAGGAAACTTATGAAACAGAGATCACTTACGAGGGAAAACTCC
ACCAGGTGGAGATTATCGATACAGCAGGTCAGGAGGAGTTCACTTCATTT
TTGGACTCTTCGCTCTCTACCGGCGATGCGTTTATGATTTTGTACGCCAT
CAATTCATTGTCCAGTTGGAACGACTTGAAGACTCTGAGGAGTAAGATTT
TCCACGGTTCGGAGGGCAAGAATGCGGGACACAGGATACCTATGATCATT
GTCGGTAATAAAAAGGATTTGGACAACGATCGAGACACGAGTGAGGAAAG
TGCTCAAGAGTACGCCGACTCGTTGCGTGTCCCATACATTGAAACATCCG
CTAAGACGGGATACAACGTCAAAGAAGCTTTCCATCTTATCATGTCGGAG
ATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACCAAGAACAGACC
GTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGATTGTTTAAAGAA
GAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGTAGTG
GGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGAAGAA
CGAATTTACTGAGtaTTATGATCCGACCATGGAGGAAACTTATGAAACAG
AGATCACTTACGAGGGAAAACTCCACCAGGTGGAGATTATCGATACAGCA
GGTCAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCTCTACCGGCGA
TGCGTTTATGATTTTGTACGCCATCAATTCATTGTCCAGTTGGAACGACT
TGAAGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAATGCG
GGACACAGGATACCTATGATCATTGTCGGTAATAAAAAGGATTTGGACAA
CGATCGAGACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTTGC
GTGTCCCATACATTGAAACATCCGCTAAGACGGGATACAACGTCAAAGAA
GCTTTCCATCTTATCATGTCGGAGATTGAACGAATACGTCCCGACCTGTT
AGTGAAACGGACCAAGAACAGACCGTCGACGAGTAGCGATCCGAAGAAAA
AAGACTGTAGGATTGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008496XLOC_008496Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015168-proteinTCONS_00015168-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015168-exon-sc0000205-1491911889:10422..10538TCONS_00015168-exon-sc0000205-1491911889:10422..10538Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1510915933:10422..10538TCONS_00015168-exon-sc0000205-1510915933:10422..10538Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1575043694:10422..10538TCONS_00015168-exon-sc0000205-1575043694:10422..10538Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1491911889:11009..11047TCONS_00015168-exon-sc0000205-1491911889:11009..11047Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1510915933:11009..11047TCONS_00015168-exon-sc0000205-1510915933:11009..11047Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1575043694:11009..11047TCONS_00015168-exon-sc0000205-1575043694:11009..11047Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1491911889:11362..11598TCONS_00015168-exon-sc0000205-1491911889:11362..11598Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1510915933:11362..11598TCONS_00015168-exon-sc0000205-1510915933:11362..11598Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1575043694:11362..11598TCONS_00015168-exon-sc0000205-1575043694:11362..11598Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1491911889:12551..12640TCONS_00015168-exon-sc0000205-1491911889:12551..12640Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1510915933:12551..12640TCONS_00015168-exon-sc0000205-1510915933:12551..12640Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1575043694:12551..12640TCONS_00015168-exon-sc0000205-1575043694:12551..12640Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1491911889:13583..14507TCONS_00015168-exon-sc0000205-1491911889:13583..14507Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1510915933:13583..14507TCONS_00015168-exon-sc0000205-1510915933:13583..14507Clytia hemisphaericaexon
TCONS_00015168-exon-sc0000205-1575043694:13583..14507TCONS_00015168-exon-sc0000205-1575043694:13583..14507Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:10422..14507 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
73.6331	75.5954	109.232	109.955	39.4242	28.5001	35.4746	37.9979	37.4218	46.3898	25.9768	26.7613	27.2578	27.7941	29.4171	33.0508	49.7786	45.5569	23.0245	26.0605	35.3979	33.8428	49.024	47.7875	42.8244	44.0208	41.5716	34.5106	26.2582	26.8576
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
[Close]
BLAST of TCONS_00015168 vs. Swiss-Prot (Human)
Match: RASH (GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.091e-26
Identity = 64/179 (35.75%), Postives = 104/179 (58.10%), Query Frame = 1 
Query:   85 TIRFLKNEFTEYYDPXXXXXXXXXXXXXGKLHQVEIIDTAGQEEFTSFLDSSLSTGDAFMILYAINSLSSWNDLKTLRSKIFHGSEGKNAGHRIPMIIVGNKKDLDNDRDTSEESAQEYADSLRVPYIETSAKTGYNVKEAFHLIMSEIERIRPDLLVKRTKNRPSTSSDPKKKDCRIV 621
            TI+ ++N F + YDPT+E++Y  ++  +G+   ++I+DTAGQEE+++  D  + TG+ F+ ++AIN+  S+ D+   R +I    +  +    +PM++VGNK DL   R      AQ+ A S  +PYIETSAKT   V++AF+ ++ EI +       K  K  P   S P    C+ V
Sbjct:   20 TIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDD----VPMVLVGNKCDL-AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ------HKLRKLNPPDESGPGCMSCKCV 187
The following BLAST results are available for this feature:
BLAST of TCONS_00015168 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASH4.091e-2635.75GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1[more]
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