|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012505 ID=TCONS_00012505|Name=TCONS_00012505|organism=Clytia hemisphaerica|type=transcript|length=2429bp ACTGCTTAGATATATCATTTTGTCTCGCACAGTAtcttaatttcttttta ttgtgATTTTTAGTGAGAAAATTGCAGAATATAGTTGCAAAACATACCTT TTCaccaaaaaattgcattctAATTCCTAATAATTTCAGAAGTaccacca aaaagaaaaaatataagtaAAAACTGACATTACCTCCTTTTTTGACAGCA TTTGTGGTAATAGCTGCAACATCAGAACCAGCACCAACCTCACTCACACC CAAACATCCAATAAAATCTCCTGCAATGCTTGGtgccaaaaatgtttttc tcaatTCATCACTCCCAAAATTTGTTAGAGCTGGAGTACACATATCACAT TGCACACCAATTGCCATGGGGATTCCACCACAATCAATCATACCAAATTC TTCGTGCAGCGCCATAGCATAAGAAAAGTCAAGCCCCATTCCACCATATT CAACTGGTTTATTGACTCCTAAATAGCCAGCATTgccaagttttttgaaa agttcatgTCCAGGGAAAGATCCTTGCTCCTCCCACTCTTCAACATAAGG ATTGATTTCTTTATCAATGAATTTCCGAATGTTTCTTCGCAACTCAACAT GATCTTCTGTGAAGACTGATTCATCAGCTAGACTATCTTGAACTTCATAG TTAGATTCAAAAAGTCTTGATCTTTGTAGAGTATTAGACGAAGAAGTCAA GTTTCTCTTGGATAGGATATTAAAAGTTCTTGGAAGGTACCTGGAAGTCT TGAAAATACCAGCCATTTTTGCTTTGATTATGTAAGGTTCTGTCAGGAGT GACCTTTGGACCAAAACAGAGCCAGTCTAGCTCTGCAACTTCTCATTTTT TCCGAGAGTGTAAACCTTTTAGGTTAGTTAGGGGTAAACAAAAGccgatt caaaatggtagcaaaaaaataatcatatgACGCTTTTTTCAAAACAGGAC AAATGATCGACTTTGAAGTGACTGTCATGTGATTTTCTTATCAACTGATA TTTGAAACCAATTTTGTTACGAAATAAAAATTGTACACTAAAAGAACACT TGACATAGTTAGGAAACTCATTCCACTTTCTACAAGGCAGGCAGGAGGAA AGACTCACAATTACTGCAAAATGATGAAAGGTTTAATCTTATTGGGTTTG TTGGGGCTTTCCCTTGCCCATCTTGAGGTGATCGAAGATAAATCATGGCA TTTATGGAAAGGAGTTCACAACAAATATTACCCCAACATGTTTGTTGAGA AGATCAGATATAATATTTGGCAAGACAACAGCAATCGTATTGAAAACTTC AACAAGTTGAACCAAGGATATTCTCTCCGTATGAATCATTTTGGTGATTT GACCAACACTGAATACCGTCAACACATGAATGGTTACAAAATGAGATCCA CAAAACATAGTGAAGCTGCTACCTTTCTTTCACCAACCAATGTCAAAGTA CCAGACACTGTTGACTGGAGACAACAAGGATTCGTCACACCTGTCAAGAA CCAAGGACAATGTGGATCATGCTGGGCTTTCTCCACCACTGGTTCATTGG AAGGACAACATTTCAAGAAAACTGGAAAATTGGTCAGTCTCAGTGAACAA AACTTGGTTGATTGTTCAAGCAAAGAAGGAAACATGGGATGTAATGGTGG TTTGATGGATCAAGCTTTCGCCTACATCAAAACTAATGGTGGTATTGATA CTGAAGAAAGCTACCCATACAAAGGAGCTGACGGACAATGTAAATTCGAC GCAAAGAACATTGGAGCAAAcgacactggattcgttgacgTCAAGAGTGG TGATGAAGATGCTTTGAAAACTGCTGTCTCCACAgTTGGACCAATCTCTG TTGCCATTGATGCATCTCACTTCTCGTTCCAATTCTACCACTCTGGTGTC TACAACTCATGGCTGTGCAGCTCTACACGTCTTGATCACGGTGTCTTAGC TATCGGATACGGTACTTACCAAGGAAAGGACTACTGGCTCGTCAAGAACA GCTGGGGAACAGGATGGGGATTAAAAGGTTACATCATGATGAGCcgaaac aagaaaaatcaatgtGGTATCGCTACTCAAGCTTCATACCCACTCGTTTG AAACTAACTAAAGACAACATGCTAGAGGATTTGTAGATGATTTTTTTGTA GTGCATTTTTTTTACATAGGGTTTTCTTTAGTTGAAACTGATGCTCAGTT TTAAGACAATTATAATCTTTCTCTTCTTGCATTTTTGTTGAATTCTTGAA TTTATCACTGAGATTTATGAAAAGCACCGAGGCTCGATAAGGGTCATTCG GAGGAAATTAGTGAAAGGTTCTCTTGTGAATCAGCATCAGCTAACGAGca atttcatttaatttattatgatttttaattatttttgttaacgtttttta aattttgattaatgGTATATATTGATAAG Run BLAST on NCBI transcript from alignment at sc0000145:276644..286584+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012505 ID=TCONS_00012505|Name=TCONS_00012505|organism=Clytia hemisphaerica|type=transcript|length=9941bp|location=Sequence derived from alignment at sc0000145:276644..286584+ (Clytia hemisphaerica) ACTGCTTAGATATATCATTTTGTCTCGCACAGTAtcttaatttcttttta
ttgtgATTTTTAGTGAGAAAATTGCAGAATATAGTTGCAAAACATACCTT
TTCaccaaaaaattgcattctAATTCCTAATAATTTCAGAAGTaccacca
aaaagaaaaaatataagtaAAAACTGACATTACCTCCTTTTTTGACAGCA
TTTGTGGTAATAGCTGCAACATCAGAACCAGCACCAACCTCACTCACACC
CAAACATCCAATAAAATCTCCTGCAATGCTTGGtgccaaaaatgtttttc
tcaatTCATCACTCCCAAAATTTGTTAGAGCTGGAGTACACATATCACAT
TGCACACCAATTGCCATGGGGATTCCACCACAATCAATCATACCTTTtag
taaaaaatttaaataaattttaattatCTGTCTGATCTTTTAGTTTGGTT
TTACAACTTTGCACACAAAGAAAATGGGGCTTGGAGTTTCTTGGCCAATA
AATCTGTCTCTAATTCTTTTCCGATATACTGTTGGCAAGAGAGCCAGATC
CCCGGGGGatcaaaaatggatgatgggtatgtgcggacggtaagggtcgg
tttttttcacctttcaaagtctctctaagggtcggaaaattcaggatttt
tagcaAATTTTTTGATTTCCAGAGAAAGAATTGTAATATTAAGTCTCTCT
AAGGGTATGACTTTTTTCAAAAATCGAAAAAAAAATTCAAAAAGTTTCTC
TAAGGGTCACCTTTTCAGCAAAAATCAGTCTCTCTAAGGGTTGGTTTTCG
GAGGTCCCGTCCGCACATACCCCTAATTCGCCAACCCTAGTACCCCCCCC
CCGAGCCAGATACAACTACAGTCCCCTGTCCATAACATTATAAGGTGTCA
CAATTATAAACTTTTTGTTGAAAAAATGTTTATCTTCTGATCTCTAAAAA
ATTCTTTCTGATAAAGAGAATTCCCAAAAGTTATAACGAGTAAAATAATT
GCTTTCTCAagatttctaaattttaatcaaaatacgAGCACAAAAATCTG
TGCAAGGTCTCTCCTGGCAGGCCAATCTGTTGCCatcataccgtaagttg
gtctaatgtcgacaacCCTCATAAAATTCGGTCACCCTTCTTTACAGCTG
GCGATAATAGAAAAGTTGGGATCACTGTTTGCTAATTAATGGTCAGAGGg
aaatataacttttttcaatcagtgatttaGACCTACCTTTTAATCCCATC
TATAAGAAAGGTGTCAGAATTGAATTAGGTGAGGTATGTCAACATTACAC
CAATGTGATTAATTAATAGAATAGAATCCATAACCAGCCGCTAATTTTAA
AAaccataaaacaaaagaaagtccgAAAAGATTCATTCTGAcatcaaaaa
tcttgaagtaACAGACAAAGTGATCTCAAGTAAAATATGCTATATTTCGT
ATTCTATCTAATACATCATTCAGGCAAAAAGTCAGTCTTTTTGCCTGAAT
GATGTATTATttacttttgatacttttgatgggttttttgagtctctcaa
tcatccaatttggaaATCCGATGATTCACCATTTCTCTTACACTGTTTGA
ACCCGCTCTCCTGTAGGGATAATAATTCGGGAGCAGTGGTTCGTCCGGCA
GTgtggaaagaaaaaggtcaagttGTCAAAGATAGAATTAGAATTAGATA
GAAGCATATTTTAGCATATTTTACTTGAGATCACTTCGTCtgttatttca
agatttttggtgtcagaatgaatctttttggactttcttttgttttatgg
tTAATAGAATAGAATTATAtgacaaaaatcagaaagatgAATTCAGCCAA
CAGGTTTTTGTCACAAGGTTTCTGGGCTAGGAGTTTCTAAGTTGTTTCTC
TAAGTTATTTGGAGTGAAACATCCAATTTATGTCATTTTACTGAACTATT
TATGagccttcatttttttttaaaatgaaatttggcataGTTTAAGACAG
GTTTTTgtgcttttatttttttcaagttattcaTGAAGATCTgtttaata
ttgaaataaaagatTATAATAAAAATCATTTGCGCTGTTTTAAGATGTCA
CCTGTAGTAGAATTTTGATTAAAGAATATTGCTTGCTTCTAAATAAAACT
GAAAAGattatgaaaaaaactgaaaaaatgaaaacagaaAAAGGCCTAAA
ACCAAgttatgaaatatataaaaaaggcTATAAAACTTAAGTCAAAATAT
GTGAAACAACAAATTACAGGCGTGAAAAACCTTTAGCATTGATAGATTCA
ATAACGTCAAATTATGACACTTCACAAACCAAATATTGCCAAACTCAAGA
ATGAAGTTAATTTAAATTATTGGAATTCCAAAACCCTAAGTATAAAAAAA
ACTAACGCATGCAGTAGTTCAATTATGgtaacaaaaaattcaagattttc
caGTGGAATTTTATATGGTAAAATAAAGGTCACTAATAACTAAAAaacac
gtgcgtttggtttgggaacgcgaaacacgaacgcaaactacccatgtcta
aacttttcaatatatctccagaactaacagattttttgaaattctgtaaa
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNACCCATTcattgttaatacattttttatttgaaagtaatctctt
catggaataaaaagatatagtcaaatcttgtagggtcatttttcaaaaaa
ttttttgccaaattcgattttcgcatttcgccattttaccctacgcaaac
gcacgtgaaaAAGATAAGAACATAACATACCAAATTCTTCGTGCAGCGCC
ATAGCATAAGAAAAGTCAAGCCCCATTCCACCATATTCAACTGGTTTATT
GACTCCTAAATAGCCAGCATTgccaagttttttgaaaagttcatgTCCAG
GGAAAGATCCTTGCTCCTCCCACTCTTCAACATAAGGATTGATTTCTTTA
TCAATGAATTTCCGAATGTTTCTTCGCAACTCAACATGATCTTCTGTGAA
GACTGATTCATCAGCTAGACTATCTTGAACTTCATAGTTAGATTCAAAAA
GTCTTGATCTTTGTAGAGTATTAGACGAAGAAGTCAAGTTTCTCTTGGAT
AGGATATTAAAAGTTCTTGGAAGGTACCTGGAAGTCTTGAAAATACCAGC
CATTTTTGCTTTGATTATGTAAGGTTCTGTCAGGAGTGACCTTTGGACCA
AAACAGAGCCAGTCTAGCTCTGCAACTTCTCATTTTTTCCGAGAGTGTAA
ACCTTTTAGGTTAGTTAGGGGTAAACAAAAGccgattcaaaatggtagca
aaaaaataatcatatgACGCTTTTTTCAAAACAGGACAAATGATCGACTT
TGAAGTGACTGTCATGTGATTTTCTTATCAACTGATATTTGAAACCAATT
TTGTTACGAAATAAAAATTGTACACTAAAAGAACACTTGACATAGTTAGG
AAACTCATTCCACTTTCTACAAGGCAGGCAGGAGGAAAGGTAaccatttt
tatatattttttatatcagCTCTTCTATCTTTTTTAATTTAGTCTTCTTA
GTTTTATTTATAGCTTATCTTGTTTTCCGAAAGTGGAAAATTTCAGGAGG
AAATATTTCTTgtgaaatcaaaagaaaagaatgcTGGCCAATTTCTGCCA
TCAGTCTGTCAGTTGTTATGCAATTTGGCAGCACAGCTTTCTGTGAAATT
TTGAGCtcgatattttgtaaaaaaaattgtcgtatggaacaaaagaaaat
agtcaaagattaaaaaaatttacagttaACTTAAATTGTAATTGATAGCA
AGGTGTGGggcttttaaagtttttaattatGAATGGCAGTTTTCAGGAGC
TTAATCTTGGCACCAGTTTCAACTTTCCCCCAACTTGCCTTcctcgaaaa
tgaagaagaagaagaaatttgcGGTGTCACGATGGAGCACATGACGTCAT
CCTAGCGGCAAATTACACACTTGTAATTTGTCCAGTATATTGGGGGATGG
GTGGTTTGATGGCGCGGGCGACCTCTTATTCTCTAATCGAGGTTTGCCAT
TGACCTTTTCGTCTTTCCATCCgtcatattgaattgtatgcaaaattatg
gtggccgaattgccatggtgaaattcccttttagaaagtatgcaaaacat
gtgcaaaaagaaagtattaatacaAAACTACATGCATAATTTTCAATTAc
aattaaagtgtaatcttgtagaagaaagattaaattagcttttcttgaaa
actaaaaacaattatattcactcatctcttagaacaagcagttcaaaaaa
caataacattagacataaagtcaaactgaaaaatcaccagcgAAGGTAAA
AATTATTCCTTATTCGGCTGatggtaaattattctcctgggaatagagcc
gccaaatgatcaaatcaaaacattgataatgtgtgacgtcataattactg
ctttcagtttgcgtgttttgaaagtttgatgtgtgtactccgtctttgtg
gagttttttaatggcatgaaaacagaatatgctatgtctttaagaacaaa
tttctaaaaggcttttgttattctgtaaatatttatttttgaattaagaa
attccatcttatATTGTTCTaatattataatatttatttataagatgctt
tgttgtctttttaatctttgtgtaaatttgcatatgttttgcatactttc
caactaaatccaaccacggcattttcgttcctgtgtttttgcatacaatt
taagatggcggatggaaaggcagACAGGTCTATTTTGAAGgatgacaaaa
aattaaaaagggcgcgctatcataGCAGTGAAAATTCGTTCGCCATGGTC
TCTGTTTCAGAAATGTTGGTTCGTTTGTGTTGAAATGCTAAATTTTTGGA
CACAAAAATACAATTGGGTATGGGGATGTGCCACTGATCAAGGTCCCTTT
TTAGTCTCTTTAggctgaagatatctgacaggggtCCCTACTTTACTAAT
TTTTAAAGATGTGTATCTTTCAAGGTTGGCTTTttgttatttattattat
ttttgttatcATTATTATAACGAATGCAAAGTTCAGGCACGCTGTTGGCC
TCTAGAACtggtctttgtttatttacaataaatagCGTAAATCATGGTTT
GCCCAtgctttgtttaaaattttccttaaacGGTTTTATTGATGATACta
attattttgtaaaattttcagggtaaaatgggaaaattttcaatttttca
atctgACAGGTTCCCAAATTTGCCTAACATTCATATCTGAGGGAGTAGTG
CCCCCTGGCTAGTACACAGACCTTATGCAAAATTAAGTCTCTAATGTTGT
ATTCATTATTTCATGATGCATTTTTAAAAAGTCAACCTTTTTGTATTTAG
ACTCACAATTACTGCAAAATGATGAAAGGTTTAATCTTATTGGGTTTGTT
GGGGCTTTCCCTTGCCCATCTTGAGGTGATCGAAGATAAATCATGGCATT
TATGGAAAGGAGTTCACAACAAATATTACCCCAACATGTTTGTTGAGAAG
ATCAGATATAATATTTGGCAAGACAACAGCAATCGTATTGAAAACTTCAA
CAAGTTGAACCAAGGATATTCTCTCCGTATGAATCATTTTGGTGATTTGA
CCAACACTGAATACCGTCAACACATGAATGGTTACAAAATGAGATCCACA
AAACATAGTGAAGCTGCTACCTTTCTTTCACCAACCAATGTCAAAGTACC
AGACACTGTTGACTGGAGACAACAAGGATTCGTCACACCTGTCAAGAACC
AAGGACAATGTGGATCATGCTGGGCTTTCTCCACCGTAagaattcaaaac
aaattttctacAAATATTCTTATTGATGCATTTTTAGTAAGAAATAAACC
AAGGTAAATTACTGCATGCCTATAGTTTCCAAAGACTTTGGTATTTCCAC
CACTCCAAAAATTACATTGATACAACAAATTTGGATATCAGTAATTCAAC
CAAGtgtaggattttttattttgacatttttatatttttttattgttaca
CATTCGatagttttattgttaaaatcaattcaaactttaaaaatgaCTTT
GCATGATTTCGTTTGAGTATTGTGTTTCTTATATGATTTTTCGGATACAA
TAACATGTTCCGTATTTTGACATTTGCAGACTGGTTCATTGGAAGGACAA
CATTTCAAGAAAACTGGAAAATTGGTCAGTCTCAGTGAACAAAACTTGGT
TGATTGTTCAAGCAAAGAAGGAAACATGGGATGTAATGGTGGTTTGATGG
ATCAAGCTTTCGCCTACATCAAAACTAATGGTGGTATTGATACTGAAGAA
AGCTACCCATACAAAGGAGCTGTAAGTGTTTaacatagtccgtataaaaa
accctggtctagACGCGTattgttgtaactttttgttaactttttccttt
gttaaaaaCGATTACAAAAATCCaattgctcagtttttgatcacgttacc
aaatactCCTGTTAGGATTGGTTTGAaagttaatcacatgatcaaaaagg
gagcaaaacaaaataatttctcaacgcaagctCAAGTATAGAGCAAAAAT
AGAAAGAAACGAAAGGCTTATACGGACCATGGTGTTAACTTATACATAGA
TTTGTATATTTATTTGAAACGGGAAAAAACCTctacttttttattatttt
ataatatttCGCGTTAACATTGACGGactcaaatttgaattttattgggT
TTATGTAGGTTTTTTTTCCGACGGAGACGATTAGCCTCATATTTGTCTAG
ATTATAATCAGCTAAAAAGGACGATAAAACAGCACTTTTATCGTTCTCTA
TTTCAAGGGTCAAAACTGTGGGttttctaaatcgcttcagttaTTCCGCC
GCCCTCAAAAGGATGGTTGGATAAAAAATATGATTGAATGTCTGTATAAT
TATTTTAAACGGGAGAAAGCCTCTTATATCTCTTATTCTGAGATTACATT
ATCTTTTCATAAGCGTCTGATTTTTATCTGGAAGTGCTATCTGTATGAAG
TAAAGTTTCAACAGTAGATTTTTTCAACATCTATCTAATAGCTTAAAACA
TCTATAACCCTTTAATACTTTTTGCATTAATTTACAGTCCCCTGGAAGGA
AAGTAATAAATAGTTTTACTGTTGAGAATCACATATTATTGATAAAATAG
GACcgtaataatttttcattttgatttttacaagGACGGACAATGTAAAT
TCGACGCAAAGAACATTGGAGCAAAcgacactggattcgttgacgTCAAG
AGTGGTGATGAAGATGCTTTGAAAACTGCTGTCTCCACAggtaataaaaa
ttttctttctattcAAACTCTTTCCAGTGTGCAAAAGTCTTCTTTCTCAA
CGGGtacaaaaatagtttttttggtctccaaattcaacaaaattctgGTG
AATTTGAAGGGTCTTGCTTATTTGTTGTTTAGAGTTTAATTTTCCGAGCA
AGAACCTTTACTTTGAACACTGTCTTTCTCATTACATCTATCAACAGTTG
GGTGTATTTCTGATTACTCATAActgatgtttttaaaacatcaGTAATTA
CACTTGTGTGTGTCCAACATAGCTAAATAACGATTTCAGCGCTATTGCTG
AGCTTTCTTTCTTACCTTACCACAAAATTTTTGACCGTACAAATCCCCTA
GAAAATACTCAGAAAAGATTTCTTATTATCTTATTAACAAAacttctaat
tttcactttagTTGGACCAATCTCTGTTGCCATTGATGCATCTCACTTCT
CGTTCCAATTCTACCACTCTGGTGTCTACAACTCATGGCTGTGCAGCTCT
ACACGTCTTGATCACGGTGTCTTAGCTATCGGATACGGTACTTACCAAGG
AAAGGACTACTGGCTCGTCAAGAACAGGTGAGAGTAATGGAATCATTGgt
attcatttttgattttcctgaTGGATATAATACAACATTTCGTTATTGTC
GCAACCAATCATTAAAAAGAGAAGTAAAGAGACTGGGAAAGTTTTTTCTA
ATACgctctttttataaaaaccagtaaattttggttcAGACTGGGCTGCT
TTTTGAAATTGTCAGGCTTAATATTCTTACGATGTTCCTAATACGCttag
ttttttttacttaaaaactgaaaatttgttTAAATCTGTACTTCTTTGTA
ATTTCTAAACTCTTAGGATCACATTGCTCTTCATCCTTTGTTCCTGACTG
TTGTCAAAAGTAAGATAAGAGAAGGCAGAAAAGTCGACCGTCTAAACTAG
ATCATAGTCTTTCTTTTAAGAACAAGTATAAACCCCTCAAATTGGATATC
AATTAGATCCTATGTTAtgtttatctggcacccagatggtgaaattttca
tccgacacgctaaaggcctgaaggtcgggaaaatctTCGGGGAAATTGGC
CGCTCCTTTAgggctttagcgtgggcggccgccaatccaccatcggaata
tcaaataaatattatgtccaaaaaatctttctcttcatgattttctctct
ttttgctTTCTAGCTGGGGAACAGGATGGGGATTAAAAGGTTACATCATG
ATGAGCcgaaacaagaaaaatcaatgtGGTATCGCTACTCAAGCTTCATA
CCCACTCGTTTGAAACTAACTAAAGACAACATGCTAGAGGATTTGTAGAT
GATTTTTTTGTAGTGCATTTTTTTTACATAGGGTTTTCTTTAGTTGAAAC
TGATGCTCAGTTTTAAGACAATTATAATCTTTCTCTTCTTGCATTTTTGT
TGAATTCTTGAATTTATCACTGAGATTTATGAAAAGCACCGAGGCTCGAT
AAGGGTCATTCGGAGGAAATTAGTGAAAGGTTCTCTTGTGAATCAGCATC
AGCTAACGAGcaatttcatttaatttattatgatttttaattatttttgt
taacgttttttaaattttgattaatgGTATATATTGATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00012505-exon-sc0000145-1491911889:276644..277032 | TCONS_00012505-exon-sc0000145-1491911889:276644..277032 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:276644..277032 | TCONS_00012505-exon-sc0000145-1510915933:276644..277032 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:276644..277032 | TCONS_00012505-exon-sc0000145-1575043694:276644..277032 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:280370..281082 | TCONS_00012505-exon-sc0000145-1491911889:280370..281082 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:280370..281082 | TCONS_00012505-exon-sc0000145-1510915933:280370..281082 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:280370..281082 | TCONS_00012505-exon-sc0000145-1575043694:280370..281082 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:282994..283428 | TCONS_00012505-exon-sc0000145-1491911889:282994..283428 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:282994..283428 | TCONS_00012505-exon-sc0000145-1510915933:282994..283428 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:282994..283428 | TCONS_00012505-exon-sc0000145-1575043694:282994..283428 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:283773..283964 | TCONS_00012505-exon-sc0000145-1491911889:283773..283964 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:283773..283964 | TCONS_00012505-exon-sc0000145-1510915933:283773..283964 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:283773..283964 | TCONS_00012505-exon-sc0000145-1575043694:283773..283964 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:284828..284933 | TCONS_00012505-exon-sc0000145-1491911889:284828..284933 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:284828..284933 | TCONS_00012505-exon-sc0000145-1510915933:284828..284933 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:284828..284933 | TCONS_00012505-exon-sc0000145-1575043694:284828..284933 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:285355..285520 | TCONS_00012505-exon-sc0000145-1491911889:285355..285520 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:285355..285520 | TCONS_00012505-exon-sc0000145-1510915933:285355..285520 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:285355..285520 | TCONS_00012505-exon-sc0000145-1575043694:285355..285520 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1491911889:286157..286584 | TCONS_00012505-exon-sc0000145-1491911889:286157..286584 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1510915933:286157..286584 | TCONS_00012505-exon-sc0000145-1510915933:286157..286584 | Clytia hemisphaerica | exon |
TCONS_00012505-exon-sc0000145-1575043694:286157..286584 | TCONS_00012505-exon-sc0000145-1575043694:286157..286584 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000145 | supercontig | sc0000145:276644..286584 + |
Blast
BLAST of TCONS_00012505 vs. Swiss-Prot (Human)
Match: CATL2 (Cathepsin L2 OS=Homo sapiens GN=CTSV PE=1 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 3.957e-109 Identity = 170/313 (54.31%), Postives = 212/313 (67.73%), Query Frame = 2
Query: 1187 DKSWHLWKGVHNKYYPNMFVEKIRYNIWQDNSNRIE----NFNKLNQGYSLRMNHFGDLTNTEYRQHMNGYKMRSTKHSEAATFLSPTNVKVPDTVDWRQQGFVTPVKNQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSSKEGNMGCNGGLMDQAFAYIKTNGGIDTEESYPYKGADGQCKFDAKNIGANDTGFVDVKSGDEDALKTAVSTVGPISVAIDASHFSFQFYHSGVYNSWLCSSTRLDHGVLAIGYGTYQGKD-----YWLVKNSWGTGWGLKGYIMMSRNKKNQCGIATQASYPLV 2098
D W+ WK H + Y E R +W+ N IE +++ G+++ MN FGD+TN E+RQ M + R+ K + F P + +P +VDWR++G+VTPVKNQ QCGSCWAFS TG+LEGQ F+KTGKLVSLSEQNLVDCS +GN GCNGG M +AF Y+K NGG+D+EESYPY D CK+ +N ANDTGF V G E AL AV+TVGPISVA+DA H SFQFY SG+Y CSS LDHGVL +GYG ++G + YWLVKNSWG WG GY+ ++++K N CGIAT ASYP V
Sbjct: 26 DTKWYQWKATHRRLY-GANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCF--RNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYG-FEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
The following BLAST results are available for this feature:
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