TCONS_00012505 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012505
Unique NameTCONS_00012505
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2429

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012505 ID=TCONS_00012505|Name=TCONS_00012505|organism=Clytia hemisphaerica|type=transcript|length=2429bp
ACTGCTTAGATATATCATTTTGTCTCGCACAGTAtcttaatttcttttta
ttgtgATTTTTAGTGAGAAAATTGCAGAATATAGTTGCAAAACATACCTT
TTCaccaaaaaattgcattctAATTCCTAATAATTTCAGAAGTaccacca
aaaagaaaaaatataagtaAAAACTGACATTACCTCCTTTTTTGACAGCA
TTTGTGGTAATAGCTGCAACATCAGAACCAGCACCAACCTCACTCACACC
CAAACATCCAATAAAATCTCCTGCAATGCTTGGtgccaaaaatgtttttc
tcaatTCATCACTCCCAAAATTTGTTAGAGCTGGAGTACACATATCACAT
TGCACACCAATTGCCATGGGGATTCCACCACAATCAATCATACCAAATTC
TTCGTGCAGCGCCATAGCATAAGAAAAGTCAAGCCCCATTCCACCATATT
CAACTGGTTTATTGACTCCTAAATAGCCAGCATTgccaagttttttgaaa
agttcatgTCCAGGGAAAGATCCTTGCTCCTCCCACTCTTCAACATAAGG
ATTGATTTCTTTATCAATGAATTTCCGAATGTTTCTTCGCAACTCAACAT
GATCTTCTGTGAAGACTGATTCATCAGCTAGACTATCTTGAACTTCATAG
TTAGATTCAAAAAGTCTTGATCTTTGTAGAGTATTAGACGAAGAAGTCAA
GTTTCTCTTGGATAGGATATTAAAAGTTCTTGGAAGGTACCTGGAAGTCT
TGAAAATACCAGCCATTTTTGCTTTGATTATGTAAGGTTCTGTCAGGAGT
GACCTTTGGACCAAAACAGAGCCAGTCTAGCTCTGCAACTTCTCATTTTT
TCCGAGAGTGTAAACCTTTTAGGTTAGTTAGGGGTAAACAAAAGccgatt
caaaatggtagcaaaaaaataatcatatgACGCTTTTTTCAAAACAGGAC
AAATGATCGACTTTGAAGTGACTGTCATGTGATTTTCTTATCAACTGATA
TTTGAAACCAATTTTGTTACGAAATAAAAATTGTACACTAAAAGAACACT
TGACATAGTTAGGAAACTCATTCCACTTTCTACAAGGCAGGCAGGAGGAA
AGACTCACAATTACTGCAAAATGATGAAAGGTTTAATCTTATTGGGTTTG
TTGGGGCTTTCCCTTGCCCATCTTGAGGTGATCGAAGATAAATCATGGCA
TTTATGGAAAGGAGTTCACAACAAATATTACCCCAACATGTTTGTTGAGA
AGATCAGATATAATATTTGGCAAGACAACAGCAATCGTATTGAAAACTTC
AACAAGTTGAACCAAGGATATTCTCTCCGTATGAATCATTTTGGTGATTT
GACCAACACTGAATACCGTCAACACATGAATGGTTACAAAATGAGATCCA
CAAAACATAGTGAAGCTGCTACCTTTCTTTCACCAACCAATGTCAAAGTA
CCAGACACTGTTGACTGGAGACAACAAGGATTCGTCACACCTGTCAAGAA
CCAAGGACAATGTGGATCATGCTGGGCTTTCTCCACCACTGGTTCATTGG
AAGGACAACATTTCAAGAAAACTGGAAAATTGGTCAGTCTCAGTGAACAA
AACTTGGTTGATTGTTCAAGCAAAGAAGGAAACATGGGATGTAATGGTGG
TTTGATGGATCAAGCTTTCGCCTACATCAAAACTAATGGTGGTATTGATA
CTGAAGAAAGCTACCCATACAAAGGAGCTGACGGACAATGTAAATTCGAC
GCAAAGAACATTGGAGCAAAcgacactggattcgttgacgTCAAGAGTGG
TGATGAAGATGCTTTGAAAACTGCTGTCTCCACAgTTGGACCAATCTCTG
TTGCCATTGATGCATCTCACTTCTCGTTCCAATTCTACCACTCTGGTGTC
TACAACTCATGGCTGTGCAGCTCTACACGTCTTGATCACGGTGTCTTAGC
TATCGGATACGGTACTTACCAAGGAAAGGACTACTGGCTCGTCAAGAACA
GCTGGGGAACAGGATGGGGATTAAAAGGTTACATCATGATGAGCcgaaac
aagaaaaatcaatgtGGTATCGCTACTCAAGCTTCATACCCACTCGTTTG
AAACTAACTAAAGACAACATGCTAGAGGATTTGTAGATGATTTTTTTGTA
GTGCATTTTTTTTACATAGGGTTTTCTTTAGTTGAAACTGATGCTCAGTT
TTAAGACAATTATAATCTTTCTCTTCTTGCATTTTTGTTGAATTCTTGAA
TTTATCACTGAGATTTATGAAAAGCACCGAGGCTCGATAAGGGTCATTCG
GAGGAAATTAGTGAAAGGTTCTCTTGTGAATCAGCATCAGCTAACGAGca
atttcatttaatttattatgatttttaattatttttgttaacgtttttta
aattttgattaatgGTATATATTGATAAG
Run BLAST on NCBI

transcript from alignment at sc0000145:276644..286584+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012505 ID=TCONS_00012505|Name=TCONS_00012505|organism=Clytia hemisphaerica|type=transcript|length=9941bp|location=Sequence derived from alignment at sc0000145:276644..286584+ (Clytia hemisphaerica)
ACTGCTTAGATATATCATTTTGTCTCGCACAGTAtcttaatttcttttta
ttgtgATTTTTAGTGAGAAAATTGCAGAATATAGTTGCAAAACATACCTT
TTCaccaaaaaattgcattctAATTCCTAATAATTTCAGAAGTaccacca
aaaagaaaaaatataagtaAAAACTGACATTACCTCCTTTTTTGACAGCA
TTTGTGGTAATAGCTGCAACATCAGAACCAGCACCAACCTCACTCACACC
CAAACATCCAATAAAATCTCCTGCAATGCTTGGtgccaaaaatgtttttc
tcaatTCATCACTCCCAAAATTTGTTAGAGCTGGAGTACACATATCACAT
TGCACACCAATTGCCATGGGGATTCCACCACAATCAATCATACCTTTtag
taaaaaatttaaataaattttaattatCTGTCTGATCTTTTAGTTTGGTT
TTACAACTTTGCACACAAAGAAAATGGGGCTTGGAGTTTCTTGGCCAATA
AATCTGTCTCTAATTCTTTTCCGATATACTGTTGGCAAGAGAGCCAGATC
CCCGGGGGatcaaaaatggatgatgggtatgtgcggacggtaagggtcgg
tttttttcacctttcaaagtctctctaagggtcggaaaattcaggatttt
tagcaAATTTTTTGATTTCCAGAGAAAGAATTGTAATATTAAGTCTCTCT
AAGGGTATGACTTTTTTCAAAAATCGAAAAAAAAATTCAAAAAGTTTCTC
TAAGGGTCACCTTTTCAGCAAAAATCAGTCTCTCTAAGGGTTGGTTTTCG
GAGGTCCCGTCCGCACATACCCCTAATTCGCCAACCCTAGTACCCCCCCC
CCGAGCCAGATACAACTACAGTCCCCTGTCCATAACATTATAAGGTGTCA
CAATTATAAACTTTTTGTTGAAAAAATGTTTATCTTCTGATCTCTAAAAA
ATTCTTTCTGATAAAGAGAATTCCCAAAAGTTATAACGAGTAAAATAATT
GCTTTCTCAagatttctaaattttaatcaaaatacgAGCACAAAAATCTG
TGCAAGGTCTCTCCTGGCAGGCCAATCTGTTGCCatcataccgtaagttg
gtctaatgtcgacaacCCTCATAAAATTCGGTCACCCTTCTTTACAGCTG
GCGATAATAGAAAAGTTGGGATCACTGTTTGCTAATTAATGGTCAGAGGg
aaatataacttttttcaatcagtgatttaGACCTACCTTTTAATCCCATC
TATAAGAAAGGTGTCAGAATTGAATTAGGTGAGGTATGTCAACATTACAC
CAATGTGATTAATTAATAGAATAGAATCCATAACCAGCCGCTAATTTTAA
AAaccataaaacaaaagaaagtccgAAAAGATTCATTCTGAcatcaaaaa
tcttgaagtaACAGACAAAGTGATCTCAAGTAAAATATGCTATATTTCGT
ATTCTATCTAATACATCATTCAGGCAAAAAGTCAGTCTTTTTGCCTGAAT
GATGTATTATttacttttgatacttttgatgggttttttgagtctctcaa
tcatccaatttggaaATCCGATGATTCACCATTTCTCTTACACTGTTTGA
ACCCGCTCTCCTGTAGGGATAATAATTCGGGAGCAGTGGTTCGTCCGGCA
GTgtggaaagaaaaaggtcaagttGTCAAAGATAGAATTAGAATTAGATA
GAAGCATATTTTAGCATATTTTACTTGAGATCACTTCGTCtgttatttca
agatttttggtgtcagaatgaatctttttggactttcttttgttttatgg
tTAATAGAATAGAATTATAtgacaaaaatcagaaagatgAATTCAGCCAA
CAGGTTTTTGTCACAAGGTTTCTGGGCTAGGAGTTTCTAAGTTGTTTCTC
TAAGTTATTTGGAGTGAAACATCCAATTTATGTCATTTTACTGAACTATT
TATGagccttcatttttttttaaaatgaaatttggcataGTTTAAGACAG
GTTTTTgtgcttttatttttttcaagttattcaTGAAGATCTgtttaata
ttgaaataaaagatTATAATAAAAATCATTTGCGCTGTTTTAAGATGTCA
CCTGTAGTAGAATTTTGATTAAAGAATATTGCTTGCTTCTAAATAAAACT
GAAAAGattatgaaaaaaactgaaaaaatgaaaacagaaAAAGGCCTAAA
ACCAAgttatgaaatatataaaaaaggcTATAAAACTTAAGTCAAAATAT
GTGAAACAACAAATTACAGGCGTGAAAAACCTTTAGCATTGATAGATTCA
ATAACGTCAAATTATGACACTTCACAAACCAAATATTGCCAAACTCAAGA
ATGAAGTTAATTTAAATTATTGGAATTCCAAAACCCTAAGTATAAAAAAA
ACTAACGCATGCAGTAGTTCAATTATGgtaacaaaaaattcaagattttc
caGTGGAATTTTATATGGTAAAATAAAGGTCACTAATAACTAAAAaacac
gtgcgtttggtttgggaacgcgaaacacgaacgcaaactacccatgtcta
aacttttcaatatatctccagaactaacagattttttgaaattctgtaaa
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNACCCATTcattgttaatacattttttatttgaaagtaatctctt
catggaataaaaagatatagtcaaatcttgtagggtcatttttcaaaaaa
ttttttgccaaattcgattttcgcatttcgccattttaccctacgcaaac
gcacgtgaaaAAGATAAGAACATAACATACCAAATTCTTCGTGCAGCGCC
ATAGCATAAGAAAAGTCAAGCCCCATTCCACCATATTCAACTGGTTTATT
GACTCCTAAATAGCCAGCATTgccaagttttttgaaaagttcatgTCCAG
GGAAAGATCCTTGCTCCTCCCACTCTTCAACATAAGGATTGATTTCTTTA
TCAATGAATTTCCGAATGTTTCTTCGCAACTCAACATGATCTTCTGTGAA
GACTGATTCATCAGCTAGACTATCTTGAACTTCATAGTTAGATTCAAAAA
GTCTTGATCTTTGTAGAGTATTAGACGAAGAAGTCAAGTTTCTCTTGGAT
AGGATATTAAAAGTTCTTGGAAGGTACCTGGAAGTCTTGAAAATACCAGC
CATTTTTGCTTTGATTATGTAAGGTTCTGTCAGGAGTGACCTTTGGACCA
AAACAGAGCCAGTCTAGCTCTGCAACTTCTCATTTTTTCCGAGAGTGTAA
ACCTTTTAGGTTAGTTAGGGGTAAACAAAAGccgattcaaaatggtagca
aaaaaataatcatatgACGCTTTTTTCAAAACAGGACAAATGATCGACTT
TGAAGTGACTGTCATGTGATTTTCTTATCAACTGATATTTGAAACCAATT
TTGTTACGAAATAAAAATTGTACACTAAAAGAACACTTGACATAGTTAGG
AAACTCATTCCACTTTCTACAAGGCAGGCAGGAGGAAAGGTAaccatttt
tatatattttttatatcagCTCTTCTATCTTTTTTAATTTAGTCTTCTTA
GTTTTATTTATAGCTTATCTTGTTTTCCGAAAGTGGAAAATTTCAGGAGG
AAATATTTCTTgtgaaatcaaaagaaaagaatgcTGGCCAATTTCTGCCA
TCAGTCTGTCAGTTGTTATGCAATTTGGCAGCACAGCTTTCTGTGAAATT
TTGAGCtcgatattttgtaaaaaaaattgtcgtatggaacaaaagaaaat
agtcaaagattaaaaaaatttacagttaACTTAAATTGTAATTGATAGCA
AGGTGTGGggcttttaaagtttttaattatGAATGGCAGTTTTCAGGAGC
TTAATCTTGGCACCAGTTTCAACTTTCCCCCAACTTGCCTTcctcgaaaa
tgaagaagaagaagaaatttgcGGTGTCACGATGGAGCACATGACGTCAT
CCTAGCGGCAAATTACACACTTGTAATTTGTCCAGTATATTGGGGGATGG
GTGGTTTGATGGCGCGGGCGACCTCTTATTCTCTAATCGAGGTTTGCCAT
TGACCTTTTCGTCTTTCCATCCgtcatattgaattgtatgcaaaattatg
gtggccgaattgccatggtgaaattcccttttagaaagtatgcaaaacat
gtgcaaaaagaaagtattaatacaAAACTACATGCATAATTTTCAATTAc
aattaaagtgtaatcttgtagaagaaagattaaattagcttttcttgaaa
actaaaaacaattatattcactcatctcttagaacaagcagttcaaaaaa
caataacattagacataaagtcaaactgaaaaatcaccagcgAAGGTAAA
AATTATTCCTTATTCGGCTGatggtaaattattctcctgggaatagagcc
gccaaatgatcaaatcaaaacattgataatgtgtgacgtcataattactg
ctttcagtttgcgtgttttgaaagtttgatgtgtgtactccgtctttgtg
gagttttttaatggcatgaaaacagaatatgctatgtctttaagaacaaa
tttctaaaaggcttttgttattctgtaaatatttatttttgaattaagaa
attccatcttatATTGTTCTaatattataatatttatttataagatgctt
tgttgtctttttaatctttgtgtaaatttgcatatgttttgcatactttc
caactaaatccaaccacggcattttcgttcctgtgtttttgcatacaatt
taagatggcggatggaaaggcagACAGGTCTATTTTGAAGgatgacaaaa
aattaaaaagggcgcgctatcataGCAGTGAAAATTCGTTCGCCATGGTC
TCTGTTTCAGAAATGTTGGTTCGTTTGTGTTGAAATGCTAAATTTTTGGA
CACAAAAATACAATTGGGTATGGGGATGTGCCACTGATCAAGGTCCCTTT
TTAGTCTCTTTAggctgaagatatctgacaggggtCCCTACTTTACTAAT
TTTTAAAGATGTGTATCTTTCAAGGTTGGCTTTttgttatttattattat
ttttgttatcATTATTATAACGAATGCAAAGTTCAGGCACGCTGTTGGCC
TCTAGAACtggtctttgtttatttacaataaatagCGTAAATCATGGTTT
GCCCAtgctttgtttaaaattttccttaaacGGTTTTATTGATGATACta
attattttgtaaaattttcagggtaaaatgggaaaattttcaatttttca
atctgACAGGTTCCCAAATTTGCCTAACATTCATATCTGAGGGAGTAGTG
CCCCCTGGCTAGTACACAGACCTTATGCAAAATTAAGTCTCTAATGTTGT
ATTCATTATTTCATGATGCATTTTTAAAAAGTCAACCTTTTTGTATTTAG
ACTCACAATTACTGCAAAATGATGAAAGGTTTAATCTTATTGGGTTTGTT
GGGGCTTTCCCTTGCCCATCTTGAGGTGATCGAAGATAAATCATGGCATT
TATGGAAAGGAGTTCACAACAAATATTACCCCAACATGTTTGTTGAGAAG
ATCAGATATAATATTTGGCAAGACAACAGCAATCGTATTGAAAACTTCAA
CAAGTTGAACCAAGGATATTCTCTCCGTATGAATCATTTTGGTGATTTGA
CCAACACTGAATACCGTCAACACATGAATGGTTACAAAATGAGATCCACA
AAACATAGTGAAGCTGCTACCTTTCTTTCACCAACCAATGTCAAAGTACC
AGACACTGTTGACTGGAGACAACAAGGATTCGTCACACCTGTCAAGAACC
AAGGACAATGTGGATCATGCTGGGCTTTCTCCACCGTAagaattcaaaac
aaattttctacAAATATTCTTATTGATGCATTTTTAGTAAGAAATAAACC
AAGGTAAATTACTGCATGCCTATAGTTTCCAAAGACTTTGGTATTTCCAC
CACTCCAAAAATTACATTGATACAACAAATTTGGATATCAGTAATTCAAC
CAAGtgtaggattttttattttgacatttttatatttttttattgttaca
CATTCGatagttttattgttaaaatcaattcaaactttaaaaatgaCTTT
GCATGATTTCGTTTGAGTATTGTGTTTCTTATATGATTTTTCGGATACAA
TAACATGTTCCGTATTTTGACATTTGCAGACTGGTTCATTGGAAGGACAA
CATTTCAAGAAAACTGGAAAATTGGTCAGTCTCAGTGAACAAAACTTGGT
TGATTGTTCAAGCAAAGAAGGAAACATGGGATGTAATGGTGGTTTGATGG
ATCAAGCTTTCGCCTACATCAAAACTAATGGTGGTATTGATACTGAAGAA
AGCTACCCATACAAAGGAGCTGTAAGTGTTTaacatagtccgtataaaaa
accctggtctagACGCGTattgttgtaactttttgttaactttttccttt
gttaaaaaCGATTACAAAAATCCaattgctcagtttttgatcacgttacc
aaatactCCTGTTAGGATTGGTTTGAaagttaatcacatgatcaaaaagg
gagcaaaacaaaataatttctcaacgcaagctCAAGTATAGAGCAAAAAT
AGAAAGAAACGAAAGGCTTATACGGACCATGGTGTTAACTTATACATAGA
TTTGTATATTTATTTGAAACGGGAAAAAACCTctacttttttattatttt
ataatatttCGCGTTAACATTGACGGactcaaatttgaattttattgggT
TTATGTAGGTTTTTTTTCCGACGGAGACGATTAGCCTCATATTTGTCTAG
ATTATAATCAGCTAAAAAGGACGATAAAACAGCACTTTTATCGTTCTCTA
TTTCAAGGGTCAAAACTGTGGGttttctaaatcgcttcagttaTTCCGCC
GCCCTCAAAAGGATGGTTGGATAAAAAATATGATTGAATGTCTGTATAAT
TATTTTAAACGGGAGAAAGCCTCTTATATCTCTTATTCTGAGATTACATT
ATCTTTTCATAAGCGTCTGATTTTTATCTGGAAGTGCTATCTGTATGAAG
TAAAGTTTCAACAGTAGATTTTTTCAACATCTATCTAATAGCTTAAAACA
TCTATAACCCTTTAATACTTTTTGCATTAATTTACAGTCCCCTGGAAGGA
AAGTAATAAATAGTTTTACTGTTGAGAATCACATATTATTGATAAAATAG
GACcgtaataatttttcattttgatttttacaagGACGGACAATGTAAAT
TCGACGCAAAGAACATTGGAGCAAAcgacactggattcgttgacgTCAAG
AGTGGTGATGAAGATGCTTTGAAAACTGCTGTCTCCACAggtaataaaaa
ttttctttctattcAAACTCTTTCCAGTGTGCAAAAGTCTTCTTTCTCAA
CGGGtacaaaaatagtttttttggtctccaaattcaacaaaattctgGTG
AATTTGAAGGGTCTTGCTTATTTGTTGTTTAGAGTTTAATTTTCCGAGCA
AGAACCTTTACTTTGAACACTGTCTTTCTCATTACATCTATCAACAGTTG
GGTGTATTTCTGATTACTCATAActgatgtttttaaaacatcaGTAATTA
CACTTGTGTGTGTCCAACATAGCTAAATAACGATTTCAGCGCTATTGCTG
AGCTTTCTTTCTTACCTTACCACAAAATTTTTGACCGTACAAATCCCCTA
GAAAATACTCAGAAAAGATTTCTTATTATCTTATTAACAAAacttctaat
tttcactttagTTGGACCAATCTCTGTTGCCATTGATGCATCTCACTTCT
CGTTCCAATTCTACCACTCTGGTGTCTACAACTCATGGCTGTGCAGCTCT
ACACGTCTTGATCACGGTGTCTTAGCTATCGGATACGGTACTTACCAAGG
AAAGGACTACTGGCTCGTCAAGAACAGGTGAGAGTAATGGAATCATTGgt
attcatttttgattttcctgaTGGATATAATACAACATTTCGTTATTGTC
GCAACCAATCATTAAAAAGAGAAGTAAAGAGACTGGGAAAGTTTTTTCTA
ATACgctctttttataaaaaccagtaaattttggttcAGACTGGGCTGCT
TTTTGAAATTGTCAGGCTTAATATTCTTACGATGTTCCTAATACGCttag
ttttttttacttaaaaactgaaaatttgttTAAATCTGTACTTCTTTGTA
ATTTCTAAACTCTTAGGATCACATTGCTCTTCATCCTTTGTTCCTGACTG
TTGTCAAAAGTAAGATAAGAGAAGGCAGAAAAGTCGACCGTCTAAACTAG
ATCATAGTCTTTCTTTTAAGAACAAGTATAAACCCCTCAAATTGGATATC
AATTAGATCCTATGTTAtgtttatctggcacccagatggtgaaattttca
tccgacacgctaaaggcctgaaggtcgggaaaatctTCGGGGAAATTGGC
CGCTCCTTTAgggctttagcgtgggcggccgccaatccaccatcggaata
tcaaataaatattatgtccaaaaaatctttctcttcatgattttctctct
ttttgctTTCTAGCTGGGGAACAGGATGGGGATTAAAAGGTTACATCATG
ATGAGCcgaaacaagaaaaatcaatgtGGTATCGCTACTCAAGCTTCATA
CCCACTCGTTTGAAACTAACTAAAGACAACATGCTAGAGGATTTGTAGAT
GATTTTTTTGTAGTGCATTTTTTTTACATAGGGTTTTCTTTAGTTGAAAC
TGATGCTCAGTTTTAAGACAATTATAATCTTTCTCTTCTTGCATTTTTGT
TGAATTCTTGAATTTATCACTGAGATTTATGAAAAGCACCGAGGCTCGAT
AAGGGTCATTCGGAGGAAATTAGTGAAAGGTTCTCTTGTGAATCAGCATC
AGCTAACGAGcaatttcatttaatttattatgatttttaattatttttgt
taacgttttttaaattttgattaatgGTATATATTGATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007029XLOC_007029Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012505-exon-sc0000145-1491911889:276644..277032TCONS_00012505-exon-sc0000145-1491911889:276644..277032Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:276644..277032TCONS_00012505-exon-sc0000145-1510915933:276644..277032Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:276644..277032TCONS_00012505-exon-sc0000145-1575043694:276644..277032Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:280370..281082TCONS_00012505-exon-sc0000145-1491911889:280370..281082Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:280370..281082TCONS_00012505-exon-sc0000145-1510915933:280370..281082Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:280370..281082TCONS_00012505-exon-sc0000145-1575043694:280370..281082Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:282994..283428TCONS_00012505-exon-sc0000145-1491911889:282994..283428Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:282994..283428TCONS_00012505-exon-sc0000145-1510915933:282994..283428Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:282994..283428TCONS_00012505-exon-sc0000145-1575043694:282994..283428Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:283773..283964TCONS_00012505-exon-sc0000145-1491911889:283773..283964Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:283773..283964TCONS_00012505-exon-sc0000145-1510915933:283773..283964Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:283773..283964TCONS_00012505-exon-sc0000145-1575043694:283773..283964Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:284828..284933TCONS_00012505-exon-sc0000145-1491911889:284828..284933Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:284828..284933TCONS_00012505-exon-sc0000145-1510915933:284828..284933Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:284828..284933TCONS_00012505-exon-sc0000145-1575043694:284828..284933Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:285355..285520TCONS_00012505-exon-sc0000145-1491911889:285355..285520Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:285355..285520TCONS_00012505-exon-sc0000145-1510915933:285355..285520Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:285355..285520TCONS_00012505-exon-sc0000145-1575043694:285355..285520Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1491911889:286157..286584TCONS_00012505-exon-sc0000145-1491911889:286157..286584Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1510915933:286157..286584TCONS_00012505-exon-sc0000145-1510915933:286157..286584Clytia hemisphaericaexon
TCONS_00012505-exon-sc0000145-1575043694:286157..286584TCONS_00012505-exon-sc0000145-1575043694:286157..286584Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:276644..286584 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.1449	26.6714	20.251	23.2212	16.5678	11.2619	17.0364	16.3409	37.1708	27.6683	44.6493	26.9014	49.8437	59.6994	180.228	193.384	117.923	116.752	116.46	115.201	85.9278	80.8328	199.548	200.706	68.7345	84.5741	186.527	278.247	891.631	730.094
Blast
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BLAST of TCONS_00012505 vs. Swiss-Prot (Human)
Match: CATL2 (Cathepsin L2 OS=Homo sapiens GN=CTSV PE=1 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 3.957e-109
Identity = 170/313 (54.31%), Postives = 212/313 (67.73%), Query Frame = 2 
Query: 1187 DKSWHLWKGVHNKYYPNMFVEKIRYNIWQDNSNRIE----NFNKLNQGYSLRMNHFGDLTNTEYRQHMNGYKMRSTKHSEAATFLSPTNVKVPDTVDWRQQGFVTPVKNQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSSKEGNMGCNGGLMDQAFAYIKTNGGIDTEESYPYKGADGQCKFDAKNIGANDTGFVDVKSGDEDALKTAVSTVGPISVAIDASHFSFQFYHSGVYNSWLCSSTRLDHGVLAIGYGTYQGKD-----YWLVKNSWGTGWGLKGYIMMSRNKKNQCGIATQASYPLV 2098
            D  W+ WK  H + Y     E  R  +W+ N   IE     +++   G+++ MN FGD+TN E+RQ M  +  R+ K  +   F  P  + +P +VDWR++G+VTPVKNQ QCGSCWAFS TG+LEGQ F+KTGKLVSLSEQNLVDCS  +GN GCNGG M +AF Y+K NGG+D+EESYPY   D  CK+  +N  ANDTGF  V  G E AL  AV+TVGPISVA+DA H SFQFY SG+Y    CSS  LDHGVL +GYG ++G +     YWLVKNSWG  WG  GY+ ++++K N CGIAT ASYP V
Sbjct:   26 DTKWYQWKATHRRLY-GANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCF--RNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYG-FEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
The following BLAST results are available for this feature:
BLAST of TCONS_00012505 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATL23.957e-10954.31Cathepsin L2 OS=Homo sapiens GN=CTSV PE=1 SV=2[more]
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