TCONS_00012388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012388
Unique NameTCONS_00012388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1132

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012388 ID=TCONS_00012388|Name=TCONS_00012388|organism=Clytia hemisphaerica|type=transcript|length=1132bp
GGTTTTTATGTTTACAAAAACACTTTATGTATAATGAGCACAACAGCTTG
AGAGCTTTGCAATTTATATAAGATTTTGATTTCCTTGCACACTAACTACT
TATTATTCTGATAGTTAAAAACATATAATGGGCGATGATTTTGATGACTT
GTTAGATGAGGTGGAATCAAAGTTTTGCACCAGCAAAAAGAAAACCAATG
TCACAAAGCAAGCAGTTTGTAAATCACCACAGCATAGAGGAACATGTTCT
GCTCCTGATCAGCCAAAAGTTCAAAGAAAGAAaaaatcaaGCGCGGATGA
TAACCTGGATGACATCATTGATGATATTATGATTGATGATGGATTGAATC
TAAAGAGTTTAAAGATAAGTGGCCACGAAGAGAACAATATCTCACCGAGT
AGAAGTGTCAAAAAAGGTTTGAAAGTCAAATGTTTTGCCATTCACATTGG
TGGTACATCTTTGGTAAAAGGCCCCTCAACTTCTACTAATACTCAATGTT
GTGATCGAATGCATTGCACTTCATGCGACAATCGAATCGTTTTCTTTGAC
GATTACAAATGGGATGAATCACAATGCGAATACTTGGCTTTTCGAAACTA
CTATCCTGATTTTTCAAGactaaagaaaatattaataCCAAGGAAAGGTT
ATCGAGCCTTTTGTTGTCAGTGCAGTTGGATATGTACTAAAGAAACTGTT
TTTTTGAAAGATGCTAAACCTGAATTCAAATGGGTTTGTACAAAACACTA
ACAATGCGtttctttccataggatatgtttgtttttttcggcTAAGAAAT
TAAAAGTAAAAGNACAATGCGtttctttccataggatatgtttgtttttt
tcgacTAAGAAATTAAAAGTAAAAGTGCTAATTCTAGTTTCTCAcgcaaa
aattggatttaaGCCAGTATTGTGCAACGATACCAGGAGGTCTATCCCTT
CGAAAacgttttcagtttttttaaaaattgtacatagatgcaaaaaatta
tttgtgaaaaaatttgtaaaatattattGGTGCACCgatgtgattttttt
tgtaagaaatattttgattttaggaattttttatttGTGGATAGAAATGT
AATATTTGTCATTATGTTCGATTGCTAGTTTG
Run BLAST on NCBI

protein sequence of TCONS_00012388-protein

>TCONS_00012388-protein ID=TCONS_00012388-protein|Name=TCONS_00012388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MGDDFDDLLDEVESKFCTSKKKTNVTKQAVCKSPQHRGTCSAPDQPKVQR
KKKSSADDNLDDIIDDIMIDDGLNLKSLKISGHEENNISPSRSVKKGLKV
KCFAIHIGGTSLVKGPSTSTNTQCCDRMHCTSCDNRIVFFDDYKWDESQC
EYLAFRNYYPDFSRLKKILIPRKGYRAFCCQCSWICTKETVFLKDAKPEF
KWVCTKH
Run BLAST on NCBI

transcript from alignment at sc0000144:206883..211744+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012388 ID=TCONS_00012388|Name=TCONS_00012388|organism=Clytia hemisphaerica|type=transcript|length=4862bp|location=Sequence derived from alignment at sc0000144:206883..211744+ (Clytia hemisphaerica)
GGTTTTTATGTTTACAAAAACACTTTATGTATAATGAGCACAACAGCTTG AGAGCTTTGCAATTTATATAAGATTTTGATTTCCTTGCACACTAACTACT TATTATTCTGATAGTTAAAAACATATAATGGGCGATGATTTTGATGACTT GTTAGATGAGGTGGAATCAAAGTTTTGCACCAGCAAAAAGAAAACCAATG TCACAAAGCAAGCAGTTTGTAAATCACCACAGCATAGAGGAACATGTTCT GCTCCTGATCAGCCAAAAGTTCAAAGAAAGAAGTATATTCTATTATATTT TTTGTGCCCATACCAATGCGTGCTATCAGATGTTTCAGTTTCTGAATTTT AGCTACCTTCtaaatatacacgttttttttattttaagaaacacactttt aagaaacacgaggctcagaatgcctaaaaactaagaaacatctaagaaac atgctgaggctgagaatgagaaaataacatcttTTAACTTGGTTTTTTTA GAACCTTCCAATCTTTGCatgaaatacaagaaaaaacataacccgaagat cagcatccttcttagtttttaaataaaaaacaacaagaaagtgTTCATAA TGTGGAATATTTCGATGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTGAAGCTTTCAA CCCGTCATTAATCTTTGGCCTTAGTTTTTTAATGTAAAATGCTTCTAAAA AGGCCAATTGTGACCAATTATCATTCGAATCTAAGAATTTACAATGATTC AAAACAGCGTTCAAAATGTGTTCTTTATGGTTAATCCCATGTGATTCTCC AAACAATTGTGCGAGATTAAACATGTCAGTCAAATCGTGAAAACTACTAC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGTTGGTCCACTCGTTTCCCATGTTCAATCATACGGGTTTTGAAAC AACGGTCGGTCTTTCCAACATACCTTTCACCGCAACCAGGGCAAACAATT TCGTAAATTACCTGAgactgcttggtaaaactagtttcttaaaaaaaata aacgtgtatTTAGTAATAATGTGGACCTTTAATCTCTTCATTCCCTCAAT GTCTGTCTTCATTGTTTTCTAAAAGCTTGCAAGTCACATCAAATATTAtt cttttgccagaaaatcaaGCGCGGATGATAACCTGGATGACATCATTGAT GATATTATGATTGATGATGGATTGAATCTAAAGGTTTGTTGTCTCTATTT GATTGATAATGAGCTTTTGACTACAAACTACATTCTCCTAATTGTAGAGG ACTTCGTTGCTTTTCTTTATATGATTCTCCCTTGTATATATCAACCCATC ATGTCATAGTCTGTAGAAAATGGTTTGTGTAGGAGATAATCTATTAAGTT ACCGAGTGATGGCCcggtaatttcaaatttttcaaatgtgcgtACACACC CCAACTAAGAAAGAAATCTCAAATCTATACGTAAATTACGTGAATTCATT GGAAAGCTCACTTGACCTCATTTTCCTCTTCTGGTAAACTAGAACCTTGG TTATCTTTTCTTACTAGCGCTTCTTTTGGAGCTTTTGGTCAAGCTGTATG CCTgtattattcaatttttctacAGTTTTTCAGTGAGTTGCACGAAACTC TAATATGTGtattttgtttactttgtataGAGTTTAAAGATAAGTGGCCA CGAAGAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAAGGTTTGAAAG TCAAATGTTTTGCCATTCACATTGGTGGTACATCTTTGGTAAAAGGCCCC TCAACTTCTACTAATACTCAGTAAGTGTTAgtgtttttgaaagatttatt ttgatataattgAGACTCTTTCTTGTAAACCATCGAAGACTGCTTTCATA TCATAAGTGTCTACAATGAAAAGTTCATCGGGATGTCCCTTAGGGAAATA ATTTGAGGTTTTTATCAGGATACCATAAAAGTTATATCACACTGTATGGT TATCAGCTTTgctttaaaaaaggtttttaaaatttgttgTACTGTTTGCC TTCTCTTGTGCAGTGATCTCCAACATAGGTTAACACCCTTCTCCATTTTC TTGATATATCTTATCTTGTCCTACAAGAATTTAAAGAGAATTTATCTAAA GTTAGGCTTGCGGGGATGCTTTGATCTCCAAATTTTTCTTGCATTTTGTA GATGTTGTGATCGAATGCATTGCACTTCATGCGACAATCGAATCGTTTTC TTTGACGATTACAAATGGGATGAATCACAATGCGAATACTTGGCTTTTCG AAACTACTATCCTGATTTTTCAAGactaaagaaaatattaataCCAAGGA AAGGTAAGCCAAGTGCTTTTGAGCTAGAAATTTATGATACGAAACTCTGT AANCTGTATGCCTgtattattcaatttttctacAGTTTTTCAGTGAGTTG CACGAAACTCTAATATGTGtattttgtttactttgtataGAGTTTAAAGA TAAGTGGCCACGAAGAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAA GGTTTGAAAGTCAAATGTTTTGCCATTCACATTGGTGGTACATCTTTGGT AAAAGGCCCCTCAACTTCTACTAATACTCAGTAAGTGTTAgtgtttttga aagatttattttgatataattgAGACTCTTTCTTGTAAACCATCGAAGAC TGCTTTCATATCATAAGTGTCTACAATGAAAAGTTCATCGGGATGTCCCT TAGGGAAATAATTTGAGGTTTTTATCAGGATACCATAAAAGTTATATCAC ACTGTATGGTTATCAGCTTTgctttaaaaaaggtttttaaaatttgttgT ACTGTTTGCCTTCTCTTGTGCAGTGATCTCCAACATAGGTTAACACCCTT CTCCATTTTCTTGATATATCTTATCTTGTCCTACAAGAATTTAAAGAGAA TTTATCTAAAGTTAGGCTTGCGGGGATGCTTCGATCTCTAAATTTTTCTT GCATTTTGTAGATGTTGTGATCGAATGCATTGCACTTCATGCGACAATCG AATCGTTTTCTTTGACGATTACAAATGGGATGAATCACAATGCGAATACT TGGCTTTTCGAAACTACTATCCTGATTTTTCAAGactaaagaaaatatta ataCCAAGGAAAGGTAAGCCAAGTGCTTTTGAGCTAGAAATTTATGATAC GAAACTCTGTAATAATGTGATAAAAGGTTCCTATCCTTATGTTGCATTAC TTTAACCCTTTGAACgctcaacatttttgaaaatcttaaaaaatttccat gttttctttttgaaactcaaaacttcaaaatgactttaaagATTGTAGTC TGATTGTTGGTCAATGATTTTAGTACCATTTGAAAGGTCTTTCAGAAGAT TTTAAATCAAGTCGTAGGGAGCTGGGACCTAACGTatgggacttggtatt tttgCTGTTTCAAGACGTCAAAAACAGTCCCACGGAACCTAAGggcaata aaataaaaaaagcaaaacgtcTGGAGAACGTCAGAAAGATTCCTGGAGTT attcataacaaaaataaattttgttctttatcaacaagatttggaaattt tgtttgaaactgTACATGcatatttttttgctttcacTACTGTAGTTACC ATTTTTAACGGCTCTTCTTCTTTCTAGGTTATCGAGCCTTTTGTTGTCAG TGCAGTTGGATATGTACTAAAGAAACTGTTTTTTTGAAAGATGCTAAACC TGAATTCAAATGGGTTTGTACAAAACACTAACAATGCGtttctttccata ggatatgtttgtttttttcggcTAAGAAATTAAAAGTAAAAGNACAATGC GtttctttccataggatatgtttgtttttttcgacTAAGAAATTAAAAGT AAAAGTGCTAATTCTAGTTTCTCAcgcaaaaattggatttaaGCCAGTAT TGTGCAACGATACCAGGAGGTCTATCCCTTCGAAAacgttttcagttttt ttaaaaattgtacatagatgcaaaaaattatttgtgaaaaaatttgtaaa atattattGGTGCACCgatgtgattttttttgtaagaaatattttgattt taggaattttttatttGTGGATAGAAATGTAATATTTGTCATTATGTTCG ATTGCTAGTTTG

Coding sequence (CDS) from alignment at sc0000144:206883..211744+

>TCONS_00012388 ID=TCONS_00012388|Name=TCONS_00012388|organism=Clytia hemisphaerica|type=CDS|length=3120bp|location=Sequence derived from alignment at sc0000144:206883..211744+ (Clytia hemisphaerica)
ATGGGCGATGATTTTGATGACTTGTTAGATGAGGTGGAATCAAAGTTTTG
CACCAGCAAAAAGAAAACCAATGTCACAAAGCAAGCAGTTTGTAAATCAC
CACAGCATAGAGGAACATGTTCTGCTCCTGATCAGCCAAAAGTTCAAAGA
AAGAAaaaatcaaGCGCGGATGATAACCTGGATGACATCATTGATGATAT
TATGATTGATGATGGATTGAATCTAAAGAGTTTAAAGATAAGTGGCCACG
AAGAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAAGGTTTGAAAGTC
AAATGTTTTGCCATTCACATTGGTGGTACATCTTTGGTAAAAGGCCCCTC
AACTTCTACTAATACTCAATGTTGTGATCGAATGCATTGCACTTCATGCG
ACAATCGAATCGTTTTCTTTGACGATTACAAATGGGATGAATCACAATGC
GAATACTTGGCTTTTCGAAACTACTATCCTGATTTTTCAAGactaaagaa
aatattaataCCAAGGAAAGGTTATCGAGCCTTTTGTTGTCAGTGCAGTT
GGATATGTACTAAAGAAACTGTTTTTTTGAAAGATGCTAAACCTGAATTC
AAATGGGTTTGTACAAAACACTAAATGGGCGATGATTTTGATGACTTGTT
AGATGAGGTGGAATCAAAGTTTTGCACCAGCAAAAAGAAAACCAATGTCA
CAAAGCAAGCAGTTTGTAAATCACCACAGCATAGAGGAACATGTTCTGCT
CCTGATCAGCCAAAAGTTCAAAGAAAGAAaaaatcaaGCGCGGATGATAA
CCTGGATGACATCATTGATGATATTATGATTGATGATGGATTGAATCTAA
AGAGTTTAAAGATAAGTGGCCACGAAGAGAACAATATCTCACCGAGTAGA
AGTGTCAAAAAAGGTTTGAAAGTCAAATGTTTTGCCATTCACATTGGTGG
TACATCTTTGGTAAAAGGCCCCTCAACTTCTACTAATACTCAATGTTGTG
ATCGAATGCATTGCACTTCATGCGACAATCGAATCGTTTTCTTTGACGAT
TACAAATGGGATGAATCACAATGCGAATACTTGGCTTTTCGAAACTACTA
TCCTGATTTTTCAAGactaaagaaaatattaataCCAAGGAAAGGTTATC
GAGCCTTTTGTTGTCAGTGCAGTTGGATATGTACTAAAGAAACTGTTTTT
TTGAAAGATGCTAAACCTGAATTCAAATGGGTTTGTACAAAACACTAAAT
GGGCGATGATTTTGATGACTTGTTAGATGAGGTGGAATCAAAGTTTTGCA
CCAGCAAAAAGAAAACCAATGTCACAAAGCAAGCAGTTTGTAAATCACCA
CAGCATAGAGGAACATGTTCTGCTCCTGATCAGCCAAAAGTTCAAAGAAA
GAAaaaatcaaGCGCGGATGATAACCTGGATGACATCATTGATGATATTA
TGATTGATGATGGATTGAATCTAAAGAGTTTAAAGATAAGTGGCCACGAA
GAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAAGGTTTGAAAGTCAA
ATGTTTTGCCATTCACATTGGTGGTACATCTTTGGTAAAAGGCCCCTCAA
CTTCTACTAATACTCAATGTTGTGATCGAATGCATTGCACTTCATGCGAC
AATCGAATCGTTTTCTTTGACGATTACAAATGGGATGAATCACAATGCGA
ATACTTGGCTTTTCGAAACTACTATCCTGATTTTTCAAGactaaagaaaa
tattaataCCAAGGAAAGGTTATCGAGCCTTTTGTTGTCAGTGCAGTTGG
ATATGTACTAAAGAAACTGTTTTTTTGAAAGATGCTAAACCTGAATTCAA
ATGGGTTTGTACAAAACACTAAATGGGCGATGATTTTGATGACTTGTTAG
ATGAGGTGGAATCAAAGTTTTGCACCAGCAAAAAGAAAACCAATGTCACA
AAGCAAGCAGTTTGTAAATCACCACAGCATAGAGGAACATGTTCTGCTCC
TGATCAGCCAAAAGTTCAAAGAAAGAAaaaatcaaGCGCGGATGATAACC
TGGATGACATCATTGATGATATTATGATTGATGATGGATTGAATCTAAAG
AGTTTAAAGATAAGTGGCCACGAAGAGAACAATATCTCACCGAGTAGAAG
TGTCAAAAAAGGTTTGAAAGTCAAATGTTTTGCCATTCACATTGGTGGTA
CATCTTTGGTAAAAGGCCCCTCAACTTCTACTAATACTCAATGTTGTGAT
CGAATGCATTGCACTTCATGCGACAATCGAATCGTTTTCTTTGACGATTA
CAAATGGGATGAATCACAATGCGAATACTTGGCTTTTCGAAACTACTATC
CTGATTTTTCAAGactaaagaaaatattaataCCAAGGAAAGGTTATCGA
GCCTTTTGTTGTCAGTGCAGTTGGATATGTACTAAAGAAACTGTTTTTTT
GAAAGATGCTAAACCTGAATTCAAATGGGTTTGTACAAAACACTAAATGG
GCGATGATTTTGATGACTTGTTAGATGAGGTGGAATCAAAGTTTTGCACC
AGCAAAAAGAAAACCAATGTCACAAAGCAAGCAGTTTGTAAATCACCACA
GCATAGAGGAACATGTTCTGCTCCTGATCAGCCAAAAGTTCAAAGAAAGA
AaaaatcaaGCGCGGATGATAACCTGGATGACATCATTGATGATATTATG
ATTGATGATGGATTGAATCTAAAGAGTTTAAAGATAAGTGGCCACGAAGA
GAACAATATCTCACCGAGTAGAAGTGTCAAAAAAGGTTTGAAAGTCAAAT
GTTTTGCCATTCACATTGGTGGTACATCTTTGGTAAAAGGCCCCTCAACT
TCTACTAATACTCAATGTTGTGATCGAATGCATTGCACTTCATGCGACAA
TCGAATCGTTTTCTTTGACGATTACAAATGGGATGAATCACAATGCGAAT
ACTTGGCTTTTCGAAACTACTATCCTGATTTTTCAAGactaaagaaaata
ttaataCCAAGGAAAGGTTATCGAGCCTTTTGTTGTCAGTGCAGTTGGAT
ATGTACTAAAGAAACTGTTTTTTTGAAAGATGCTAAACCTGAATTCAAAT
GGGTTTGTACAAAACACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006966XLOC_006966Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012388-exon-sc0000144-1491911889:206883..207164TCONS_00012388-exon-sc0000144-1491911889:206883..207164Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1510915933:206883..207164TCONS_00012388-exon-sc0000144-1510915933:206883..207164Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1575043694:206883..207164TCONS_00012388-exon-sc0000144-1575043694:206883..207164Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1491911889:208743..208815TCONS_00012388-exon-sc0000144-1491911889:208743..208815Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1510915933:208743..208815TCONS_00012388-exon-sc0000144-1510915933:208743..208815Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1575043694:208743..208815TCONS_00012388-exon-sc0000144-1575043694:208743..208815Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1491911889:209263..209402TCONS_00012388-exon-sc0000144-1491911889:209263..209402Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1510915933:209263..209402TCONS_00012388-exon-sc0000144-1510915933:209263..209402Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1575043694:209263..209402TCONS_00012388-exon-sc0000144-1575043694:209263..209402Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1491911889:210594..210745TCONS_00012388-exon-sc0000144-1491911889:210594..210745Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1510915933:210594..210745TCONS_00012388-exon-sc0000144-1510915933:210594..210745Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1575043694:210594..210745TCONS_00012388-exon-sc0000144-1575043694:210594..210745Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1491911889:211260..211744TCONS_00012388-exon-sc0000144-1491911889:211260..211744Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1510915933:211260..211744TCONS_00012388-exon-sc0000144-1510915933:211260..211744Clytia hemisphaericaexon
TCONS_00012388-exon-sc0000144-1575043694:211260..211744TCONS_00012388-exon-sc0000144-1575043694:211260..211744Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012388-proteinTCONS_00012388-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:206883..211744 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.9137 12.869 73.202 86.1076 7.82709 5.5297 5.30413 5.19698 4.62104 3.67774 3.93317 3.17429 2.52227 2.12384 3.01927 3.00591 3.8954 4.00252 2.76485 2.7792 4.90558 3.7523 8.13855 8.1337 3.74168 4.38291 4.02317 2.84993 4.65022 4.41908
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029239C8orf37
Blast
BLAST of TCONS_00012388 vs. Swiss-Prot (Human)
Match: CH037 (Protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.349e-26
Identity = 77/223 (34.53%), Postives = 114/223 (51.12%), Query Frame = 2
Query:  128 MGDDFDDLLDEVESKFCTSK--KKTNVTKQAVCKSPQHRGTCSAPDQPKVQRKKKSSAXXXXXXXXXXXXXXXGLNLKSLKISGHEENNI--------------SPSRSVKKGLKVKCFAIHIGGTSLVKGPSTSTNTQCCDRMHCTSCDNRIVFFDDYKWDESQCEYLAFRNYYPDFSRLKKILIPRKGYRAFCCQCSWICTKETVFLKDAKPEFKWVCTKH 748
            M +D D+LLDEVESKFCT    ++  V +   C    H    S  +Q K +   +S+     +D           +L SL     EE N+              +  R+  +GL   C  +++GG+S+  G  T+ + + CD + C +CD  +V +DDY WD+S C+YL FRN  P+F +LK  LI +KG RA+ CQCSW   +E   L+    + +WVC KH
Sbjct:    1 MAEDLDELLDEVESKFCTPDLLRRGMVEQPKGCGGGTHS---SDRNQAKAKETLRSTETFKKED-----------DLDSLINEILEEPNLDKKPSKLKSKSSGNTSVRASIEGLGKSCSPVYLGGSSIPCGIGTNISWRACDHLRCIACDFLVVSYDDYMWDKS-CDYLFFRNNMPEFHKLKAKLIKKKGTRAYACQCSWRTIEEVTDLQ-TDHQLRWVCGKH 207          
The following BLAST results are available for this feature:
BLAST of TCONS_00012388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CH0371.349e-2634.53Protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=1 SV... [more]
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