XLOC_006966 (gene) - C. hemisphaerica

Overview
NameXLOC_006966
Unique NameXLOC_006966
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:206883..211744+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006966 ID=XLOC_006966|Name=XLOC_006966|organism=Clytia hemisphaerica|type=gene|length=4862bp|location=Sequence derived from alignment at sc0000144:206883..211744+ (Clytia hemisphaerica)
GGTTTTTATGTTTACAAAAACACTTTATGTATAATGAGCACAACAGCTTG AGAGCTTTGCAATTTATATAAGATTTTGATTTCCTTGCACACTAACTACT TATTATTCTGATAGTTAAAAACATATAATGGGCGATGATTTTGATGACTT GTTAGATGAGGTGGAATCAAAGTTTTGCACCAGCAAAAAGAAAACCAATG TCACAAAGCAAGCAGTTTGTAAATCACCACAGCATAGAGGAACATGTTCT GCTCCTGATCAGCCAAAAGTTCAAAGAAAGAAGTATATTCTATTATATTT TTTGTGCCCATACCAATGCGTGCTATCAGATGTTTCAGTTTCTGAATTTT AGCTACCTTCtaaatatacacgttttttttattttaagaaacacactttt aagaaacacgaggctcagaatgcctaaaaactaagaaacatctaagaaac atgctgaggctgagaatgagaaaataacatcttTTAACTTGGTTTTTTTA GAACCTTCCAATCTTTGCatgaaatacaagaaaaaacataacccgaagat cagcatccttcttagtttttaaataaaaaacaacaagaaagtgTTCATAA TGTGGAATATTTCGATGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTGAAGCTTTCAA CCCGTCATTAATCTTTGGCCTTAGTTTTTTAATGTAAAATGCTTCTAAAA AGGCCAATTGTGACCAATTATCATTCGAATCTAAGAATTTACAATGATTC AAAACAGCGTTCAAAATGTGTTCTTTATGGTTAATCCCATGTGATTCTCC AAACAATTGTGCGAGATTAAACATGTCAGTCAAATCGTGAAAACTACTAC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGTTGGTCCACTCGTTTCCCATGTTCAATCATACGGGTTTTGAAAC AACGGTCGGTCTTTCCAACATACCTTTCACCGCAACCAGGGCAAACAATT TCGTAAATTACCTGAgactgcttggtaaaactagtttcttaaaaaaaata aacgtgtatTTAGTAATAATGTGGACCTTTAATCTCTTCATTCCCTCAAT GTCTGTCTTCATTGTTTTCTAAAAGCTTGCAAGTCACATCAAATATTAtt cttttgccagaaaatcaaGCGCGGATGATAACCTGGATGACATCATTGAT GATATTATGATTGATGATGGATTGAATCTAAAGGTTTGTTGTCTCTATTT GATTGATAATGAGCTTTTGACTACAAACTACATTCTCCTAATTGTAGAGG ACTTCGTTGCTTTTCTTTATATGATTCTCCCTTGTATATATCAACCCATC ATGTCATAGTCTGTAGAAAATGGTTTGTGTAGGAGATAATCTATTAAGTT ACCGAGTGATGGCCcggtaatttcaaatttttcaaatgtgcgtACACACC CCAACTAAGAAAGAAATCTCAAATCTATACGTAAATTACGTGAATTCATT GGAAAGCTCACTTGACCTCATTTTCCTCTTCTGGTAAACTAGAACCTTGG TTATCTTTTCTTACTAGCGCTTCTTTTGGAGCTTTTGGTCAAGCTGTATG CCTgtattattcaatttttctacAGTTTTTCAGTGAGTTGCACGAAACTC TAATATGTGtattttgtttactttgtataGAGTTTAAAGATAAGTGGCCA CGAAGAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAAGGTTTGAAAG TCAAATGTTTTGCCATTCACATTGGTGGTACATCTTTGGTAAAAGGCCCC TCAACTTCTACTAATACTCAGTAAGTGTTAgtgtttttgaaagatttatt ttgatataattgAGACTCTTTCTTGTAAACCATCGAAGACTGCTTTCATA TCATAAGTGTCTACAATGAAAAGTTCATCGGGATGTCCCTTAGGGAAATA ATTTGAGGTTTTTATCAGGATACCATAAAAGTTATATCACACTGTATGGT TATCAGCTTTgctttaaaaaaggtttttaaaatttgttgTACTGTTTGCC TTCTCTTGTGCAGTGATCTCCAACATAGGTTAACACCCTTCTCCATTTTC TTGATATATCTTATCTTGTCCTACAAGAATTTAAAGAGAATTTATCTAAA GTTAGGCTTGCGGGGATGCTTTGATCTCCAAATTTTTCTTGCATTTTGTA GATGTTGTGATCGAATGCATTGCACTTCATGCGACAATCGAATCGTTTTC TTTGACGATTACAAATGGGATGAATCACAATGCGAATACTTGGCTTTTCG AAACTACTATCCTGATTTTTCAAGactaaagaaaatattaataCCAAGGA AAGGTAAGCCAAGTGCTTTTGAGCTAGAAATTTATGATACGAAACTCTGT AANCTGTATGCCTgtattattcaatttttctacAGTTTTTCAGTGAGTTG CACGAAACTCTAATATGTGtattttgtttactttgtataGAGTTTAAAGA TAAGTGGCCACGAAGAGAACAATATCTCACCGAGTAGAAGTGTCAAAAAA GGTTTGAAAGTCAAATGTTTTGCCATTCACATTGGTGGTACATCTTTGGT AAAAGGCCCCTCAACTTCTACTAATACTCAGTAAGTGTTAgtgtttttga aagatttattttgatataattgAGACTCTTTCTTGTAAACCATCGAAGAC TGCTTTCATATCATAAGTGTCTACAATGAAAAGTTCATCGGGATGTCCCT TAGGGAAATAATTTGAGGTTTTTATCAGGATACCATAAAAGTTATATCAC ACTGTATGGTTATCAGCTTTgctttaaaaaaggtttttaaaatttgttgT ACTGTTTGCCTTCTCTTGTGCAGTGATCTCCAACATAGGTTAACACCCTT CTCCATTTTCTTGATATATCTTATCTTGTCCTACAAGAATTTAAAGAGAA TTTATCTAAAGTTAGGCTTGCGGGGATGCTTCGATCTCTAAATTTTTCTT GCATTTTGTAGATGTTGTGATCGAATGCATTGCACTTCATGCGACAATCG AATCGTTTTCTTTGACGATTACAAATGGGATGAATCACAATGCGAATACT TGGCTTTTCGAAACTACTATCCTGATTTTTCAAGactaaagaaaatatta ataCCAAGGAAAGGTAAGCCAAGTGCTTTTGAGCTAGAAATTTATGATAC GAAACTCTGTAATAATGTGATAAAAGGTTCCTATCCTTATGTTGCATTAC TTTAACCCTTTGAACgctcaacatttttgaaaatcttaaaaaatttccat gttttctttttgaaactcaaaacttcaaaatgactttaaagATTGTAGTC TGATTGTTGGTCAATGATTTTAGTACCATTTGAAAGGTCTTTCAGAAGAT TTTAAATCAAGTCGTAGGGAGCTGGGACCTAACGTatgggacttggtatt tttgCTGTTTCAAGACGTCAAAAACAGTCCCACGGAACCTAAGggcaata aaataaaaaaagcaaaacgtcTGGAGAACGTCAGAAAGATTCCTGGAGTT attcataacaaaaataaattttgttctttatcaacaagatttggaaattt tgtttgaaactgTACATGcatatttttttgctttcacTACTGTAGTTACC ATTTTTAACGGCTCTTCTTCTTTCTAGGTTATCGAGCCTTTTGTTGTCAG TGCAGTTGGATATGTACTAAAGAAACTGTTTTTTTGAAAGATGCTAAACC TGAATTCAAATGGGTTTGTACAAAACACTAACAATGCGtttctttccata ggatatgtttgtttttttcggcTAAGAAATTAAAAGTAAAAGNACAATGC GtttctttccataggatatgtttgtttttttcgacTAAGAAATTAAAAGT AAAAGTGCTAATTCTAGTTTCTCAcgcaaaaattggatttaaGCCAGTAT TGTGCAACGATACCAGGAGGTCTATCCCTTCGAAAacgttttcagttttt ttaaaaattgtacatagatgcaaaaaattatttgtgaaaaaatttgtaaa atattattGGTGCACCgatgtgattttttttgtaagaaatattttgattt taggaattttttatttGTGGATAGAAATGTAATATTTGTCATTATGTTCG ATTGCTAGTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012387TCONS_00012387Clytia hemisphaericatranscript
TCONS_00012388TCONS_00012388Clytia hemisphaericatranscript
TCONS_00012389TCONS_00012389Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012388-proteinTCONS_00012388-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:206883..211744 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C8orf37protein C8orf37 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.74 38.61 219.61 258.32 23.48 16.59 15.91 15.59 13.86 11.03 11.8 9.52 7.57 6.37 9.06 9.02 11.69 12.01 8.29 8.34 14.72 11.26 24.42 24.4 11.23 13.15 12.07 8.55 13.95 13.26