TCONS_00011215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011215
Unique NameTCONS_00011215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1855

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011215 ID=TCONS_00011215|Name=TCONS_00011215|organism=Clytia hemisphaerica|type=transcript|length=1855bp
gNACCAGTTGCTGGAAGAAcaagaaatcaacaaaagatCAAAAGAACTGG
CTGCCTCCCTGCAAAGAAGATATCTTCAGACACACAGCGAACACCAAGAA
CTGATAGAGAAATTTAATCAAGTGTTAGCGCAACTTTACGAAGCACAACA
GCATATGAACATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAG
AATCCGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTAT
GCAAAGGAGGCAGGACATGGTAGAGGTTTGTGTCCGGAAGAACTATCTTG
TTGTATCGGctgtttgtttctttttattctttgtcTCGGAAAGCTACGAA
GGCAATTTCTACCACTATTTggatatttttattaattttgaatgTTACAA
ATATTAAATGGAGTGTGAATAAAAAGTACATGAAGAGCCGTCTTAATTTT
TGATCGGTCCTTCAATGAAGTTGATTGTCTTCTTCAACCTTCTTTACAGT
CACAAATAATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAGATTG
CAAGACTGGAAAATGAATGTAAACTATTGAGGCAAGAAAATCAATTACTG
TCAAAAGCTCAACCTTCCTCAAGGCCATCATGCTCTCCTTCACCGCAACG
TCACAGATTCGAATCCAATACAAGTACACATGGAGATGATGAAAACACGA
CATCTACCAGCAATAGTATTACTCCTGAAGAACTTCAAGAACAATTGAAG
CTAGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATACGAT
CGAACGTTTCACGCAGAGACAACAGCAATTGATGAATTTCATTACAACCA
TACTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACTTGGACTCATT
GACGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGA
ATTTCTTGAACATCTATTCTAAAATCAATCGAGAGGAAGAGCAGTTTTGG
AAGTTTTTAAAACGACGAGCGCCATATTCAAAGGAAGCGAGAGTCTGTCA
AGTCATTTGGCCCCACATGTTGTCTATCCATGCAGGGAATGCTGGGATAT
TTGGAAATGTCATGGATGGTTTTTATGATAGAAGAAAGTCAGAATTATCA
ATCAGTCTTAGTTGTACGGGttttaaaatgataaatatacaAAAGAAGAC
GAattaaaaaagatataaaattaTAGGCTCACTCTTTTGGAACACAAANA
TAATTTTTTGTGACAATTATTtctagaaatttatgaaatttcaaTTTGAC
GTGAGTTGTGAGTAGATAGCAGTTTTTGACCACATGCAAATGGTTTTATC
CGTGAAAATTATATCTTGTGCGTCTACCATAGATTGACATGTGTATAGGA
GCCCCCAGCGGTAAGTCtaatcacgatatcacgcattttctttgtcttca
ataaacagcaaaaaaattggataatcatgcatccctttgaaaaagtctaa
ATCACGCattatggctcaaattttttcaaatcacgatcaacgttttgacc
tctgatcacgcaatcacgaaaaaaaaaaatccaaatcacgtaatctcGCT
AGAAAAAAGTCctcatcacgccatcacgaaaactgCTTGGGGGGCTCGTA
TAGGGACCTAACTTTGTAATGACCGAAACATTGAGGAccaaaacttttta
ctttttgagtAATATTTATTTAGATTTAGTTTAGATGTATATCATTATAT
GTTATGTTATTCCCTTGGTTTTCAGTTTGtgctttctttatttttgaaca
taTTTGAATTTTAACCAGTTTTTTTCAGCGACTCGTTTCCTTTCGAAGTT
TCCTG
Run BLAST on NCBI

transcript from alignment at sc0000122:462563..473056+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011215 ID=TCONS_00011215|Name=TCONS_00011215|organism=Clytia hemisphaerica|type=transcript|length=10494bp|location=Sequence derived from alignment at sc0000122:462563..473056+ (Clytia hemisphaerica)
gNACCAGTTGCTGGAAGAAcaagaaatcaacaaaagatCAAAAGAACTGG
CTGCCTCCCTGCAAAGTAAGAATATACCTGCATTTTATTTATTATCTTAA
GTTAGAGtcaactttaaagaaagtaAATCTTTTTCCATCAGAAATGTAAG
ACCATTCGTCAAAACGTTCAAAATTAATAGCCTTTTTTTATGTAATGTAG
AGAGAAGAAAATTCCTTTGTCAAATAGAACAATCAACTGACAAAACGCGC
ATTAAAGTGTTTTAATGATTCGTTTAAAAACTGCAATGTTTTGCGAGATG
GGCAGCTTTCTTATGATCGTTTCAGACATCAGACCTTATACACTGCCAAT
CTGGCGTTTCAAGGAAGAATCTTTTTAGTGGAATTTTTCGATTTAGGATT
CGAATTGAAAGTGCTAACAGTATACAGGCTCAAATTTTCATTCTTTGCAA
CTTTATTTTCCAGGAAGATATCTTCAGACACACAGCGAACACCAAGAACT
GATAGAGAAATTTAATCAAGTGTTAGGTATCTGATAAAAGACTGTTTAAA
TCCAGGTTTCTTTTGAATTGGTAGACAGTATATCCGAAGACCTTTCTGTT
TTACCCAGTTTGAATCTTATGTTTATTTGTTTTCATTGTTAGTTCGTTAG
AAATCCCATCCAGTTTATTTCTTTCTTAGATTTCTTTAGTTGAGCTAGAA
TATGACAATTGACAAGTTCCATGACAATTGACAAGTTCCAGAAGCCTTTT
AAACCCTGGTGAAGAGAATGGGCTCCAGTTTACCCGAAGAAAAAGGGAAT
TCCATTTAGATTCCATTAGCTGCATGTTTGATAGGCCGAAAATgcgaatt
taaaaattttgtggcAGATTTAATTTCGCCAAAATGGCAAATATTtgcga
aatcgcgaaatttaatctcgcgaaagttaGTCCTATAAAAGTAAACTGGG
ACCCAGTCTTTTTACAGGGCTCATATTGATAAGTGTATTCATttcaacaa
taaaatttttcagCGCAACTTTACGAAGCACAACAGCATATGAACATCGA
ACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATCCGCGCGGCGAT
TGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAAAGGAGGCAGGA
CATGGTAGAGGTTTGTGTCCGGAAGAACTATCTTGTTGTATCGGctgttt
gtttctttttattctttgtcTCGGAAAGCTACGAAGGCAATTTCTACCAC
TATTTggatatttttattaattttgaatgTTACAAATATTAAATGGAGTG
TGAATAAAAAGTACATGAAGAGCCGTCTTAATTTTTGATCGGTCCTTCAA
TGAAGTTGATTGTCTTCTTCAACCTTCTTTACAGTCACAAATAATAGCCT
TCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGACTGGAAAATG
AATGTAAACTGTAAGTCGGGTTTAATTtgtattattatccatatagcggt
cattaagtaagccattaaagattcgaacggcgggtggtattgaaaggttc
tatgactcaaatagtcataccagcgctgagaaaactaaggcgtcgtgctt
cagagggctgaaatatcattaaccgccctggttatagagcgataacgtca
tttgcggcccgctcggaactttattgaagtcgttgcattgaagcggtgag
actaaaccgacgtcagaaaaaaacacttttttgtcatttgaggcccgctc
gcaagggtactcaaaacttgttgaagtcattgcattggaGCGAAAATACT
tggctgacgctagaaaaaaaacgttgtttgaatttttgatacggataata
atagtaatagcgttaagttttcgttcgttgttgtcattaattctgccctt
gcagtttgattattagccctctagtgccatttgcACCCTCCGCTTCgcga
aaataacaacaacgacctcaaactgaacgccaTTGTTATATTAATTGGCA
ACATATGGTTGATGAAATATTTTGGCGTTTTTCATTACCCGACCGAGCGA
ATTCATATcaagtaaaattgaaaaaaaatgagatcgggtagctcagtcgg
tagagcattcgccttataatctaagggttgtgggttcgatccccggtcac
cgccaactcagcggatgagtagcttagattgggtaatctgatctaggcgg
taagttactgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtcgatctcccaggtctagcgcaaa
tagaaaaggggatagactccctcactcccggctccgccgacagccaccag
atgaatatacttacttacttactactgAAAAAAAAATGGTTCAAACACCG
AAAAGCTCCGGGAAAATGAATTCAATCatgaaattttaagttttgtttta
aaCCTATGTTTTTATCTTTCTCGAATCTCTCTCTTCATAGATTGAGGCAA
GAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGCCATCATGCGT
AAGTCTTTTCACATACTTACAGATTTGCTtctacttttgaaatatttttg
gaatacttataaaattttacttttaagtTACAATTGAGAGCGTTCTCTAA
TCCGACGTTCTCTTATTCTACGCGTTCCATTATTCGATGGTATTGAAAGC
CATCGTGAACGAgaaactctctaattcgatagtaattcgatacgctccat
tgggctattccagaaaaaaatgaatatatgGGGGGGTGGAGGAATTGAAA
TCGactgttttttcgtttttttgtgaTTCGTTCTTTCAAATAGCACTTCT
TCACGCATTTTCCTCTTTTGCAGTCTCCTTCACCGCAACGTCACAGATTC
GAATCCAATACAAGTACAGTGAGTGTAAACAATTTTTTGGTTTATAACTT
CTTATCAAAGCATGAGCATATCTTAAGTCCGtttgctttaagtgtgcact
attTTGCTTGCCATCttcaatcaattttaattctaacatattatataccg
aaTATCAAAGCGAATTTATGGTACTTGAAGAAGTTGTTATTTTTACGTTA
tgtaagggaagaaattttcgcggaatttaagtTCGCGGTTGAGGGaactt
tttgtttacaattccaaaaagaccaattttagggtgattttttaaatcct
gagaataATCATgtttcgtggaatttaatttcgcggattcgTCAAAGaac
tgcgaaattaaattctgcgaaaatttcttcccttaaggtatgcaAAATCT
TGATGTAGTCGTTTATTGAAAGCCGTGTATTTAAAAAGATCTCGAGCAAG
CTTCGAAATTCTTACACACTGTTTGTGCTGAGAGGGGTTAAAAGGAACTT
CAAGAAGGAGAAAGCTTCATGAAAAATTACAACTACTATACTGTTGCCAT
TTTCAACACGACAAGTCAGTTTACCAAtatgtttctttttcaaatgaaTT
CACTTTTCTTTACAGCATGGAGATGATGAAAACACGACATCTACCAGCAA
TAGTATTACTGTAAGTCTCTTCATTGACATCGCTGGTTTTCATTTCTATA
TACAATTTTCGTAGACATTGTACATGTTATTCTTCTCACGCATACACACC
TCGACATATCTTCGATTCTTTTGCACGTCTTAAGCccggtctccacttgc
gcgcgctgcgatcaaACTCTATCTAGCAAAGCtcccacgctattggtcaa
aagaaaaatgaagcaattccattggcgcgatctgacgcaACGGTCGAAAA
AAGTTAAAAcgtattcaacttttttttcgagcgctcGCTACattttcatg
atgtaatcttttttccaggcaaaaaggattgaagccaaacgGTGTGGTCG
CAGCGCGCGttagtggagaccggcctttactcTTGATTTATACCTACCAT
AAAGTGGCAATTTACTCAATTGttttaaatatcaaaaaatttgagaTAGA
AATTATGTTTTAGAATTGTGGTTCTTATTGATTTCAGCGTGCTTTATACC
TGTAGTGTTTCTCTTGTCTTGAGGCCTTCATTTTAGGATAGCTTGGATGC
TTGTTACCCTTTCTCTTGCAATTCAACATCTCATTGGGTTCCCAGCTAGA
AGTAACCacaattttaaaatataattgctAAACTCTTGAATGACTGCTAA
TAATTTGGTAGtctttttaaaactgtttttattatatttatgtGATATTA
TTAAATGTTTGAAATAAAGCTATAAGTTAATAATTCACGCACTAAACGAT
AAACagattaaataaatttttaatattaaaGTAGTGAACGTAACTTATAA
TAACATGGTCGGATTgcttgaatgaatgaatgaaagaacgaatgaatgaa
tgaatgaatgaatgaatgagtggTTGGTTGGTTGCGTGAATCGCTAAAAT
ACGATTAAAATGTCGCGGATAGTATAAGATTAAACGATAAAGCGCTTCAT
AATCATTCCATCGAAAAGCATCTTGGCTATCTTAATATGTTGGCAAGAGA
AACACTACCAGGTAACCTTGCTAAGATTTTTGTTCAAATCTTTTCATTGC
TTTTATTTATGTtgtgtacagggtgtcccgtaAAATGTCCTGTGTCAGAA
CACGActacaaataaaaaaataatcaactaCACAAATGTTTCCAACTTGT
AGTCAAATTTTGATACAACACTCTTTTTCAGGACACCCTGTAAAATTCTT
GTGctatattttcagatttttttgtccTTTAGGGTCGGCGCAAAATCTGA
GAATttgcaaaaactaaaacttgGTATAATTTATTTCCCCCCCTGTAGAT
TGATGAGaattgttctgtaaaatacaacgaTTGGGTGGACTGGCTGGTTA
TTGAAGCATTCTGATCCAAGTCGAAATGAATTCTGCCAGCATCATAGTGG
CTAACAATCTGAAATTTCAAATCTTATCACTCCAACGATGTTAATTGgtc
ttgaaaaatatatttcttggAATGCGTTCGATTAAACTGTGTGGATGGTT
TGTATTTAATGTGAAAGCCTACTTTGCTTGATTAATTGTAGTTTATGTTT
CGTGTTATTTGGTTTTTGGTGTTGCGTATTATCTAACTGTTAATTATACA
AAAtgtgttatttttttattgaatttcaattaatttaatttttagagAGT
ACacactttatttttttaatgaattaattttttcttaattattaatcgaa
aaatatttttatacatcaatcatatcatatcatattcTCGTATACGTTCA
AACTTTCATCTTGCACTGTTGTTTCTTTCTAGCGGAAAAACCTTCTATCT
CATTTTCTATCTCATTCAATGTGTCACCCTCtcttgacgtcaatgcaatg
acttctttcgtTCTTAAATAAGTATTTATCTTTGATAATCCAGCCGGact
agaatatttcaaaagtaaaacatAACCCAAAAATAATCATCTCCTTGGAT
TTCAAATAAGAATAATACGTTAAGGGAAGGGAATACGTTCGGTGTTACAG
AATTATTTCGATGTGTCTTATGCTATCGTATCATTTTAAcccaaatttca
ttttcaattggTTATGGGTTGTGTTgagttatgtttttattttatacttt
tCTGCCCACTTTCTGCCCACATTTTTCTCACTCTTGAAATTATAATTTGC
AGGACATTCAAGTAGAAAGAACCATAATTGCAACAAGAGTGCTTTACACA
CGTTCATTTTGTTGGTCGACTTGAAAATTCTCTGAGCAATCtcaaacacc
ccccccccctgcaattttttaaaaagctgtGAACTTTTTGGCAGTTTTTG
GCTAGCTATTTTATCTGAAAGATTttgtttcagccaaaaaatGGGTGGGT
GTTAAGCATCTTACAGacacgtcatcaaattttgacgtcaaatatttttt
tcattacaTTGCACTTCTTTCTTTCTCGTTTTCACTATACGCAACCTTTT
TGCTAATATATCTACTTATCTACAACACGCAGTTCTTCTTTACCCATAAC
CTCATATTTACTGCTTACTGGCGAGATGTGTTTCAAAAATCCTAGTGTTA
GTTTTGTAACTTTTTctacttttatcaattttactAAAAACATTATACAC
AATAAGgagaaaatataaataatattTGTTAGTTTCCTTTACCTTTTGAT
CAATCCAAACCAATCCTTTAGAAGATGAAAATTTCTTCGCTCAGTGAAAT
ATACAGTGAAATAAACGAATAAACAGAATCACTCAAAAAATTGAGCGAAA
TATCGAGAAAGAAAGAACTACCTAATAATTGCTACACTATGCTGGCGCAA
TCTCCAGGCAATGCAGTGTATTGTAGATTTTATtcaaataccttaaggga
agaaattttcgccggacaaattttcgcggtttttttgACAGATCcgtgaa
attaaatttcgcCGAACACGAATATTCTCAGGATTTAGTAAATCACTTCT
ACAATTGTTCTTTTTATGGCAAAAAATTCtaaccgcgaaagtttctttct
CCGAGAAATTCTTCCCTTAGGGTAAAATAATTGTAAattagttctttatt
tctcgATACTTGAAGTATGACAGCCCATTTCGCatattgaaattaatttt
ctttcttctatCTAGCCTGAAGAACTTCAAGAACAATTGAAGCTAGCAGA
GGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATACGATCGAACGTT
TCACGCAGAGACAACAGCAATTGGTACGTACTTTCGTTTTGTGAATACAG
TGGAGTTTCTGCGACTCGAGCACGCACggggaacgcaaatttgttcgagt
aatggagtaagatttataaggcattgttaacttaaGGGACTGGAAAACTG
GCCAATGATGTCACTTTCAATGGCAACAGGTGGTCACACCGGGTCACACT
TCACAAACTTTGATCTTCTATCTACAAGGAGCAATAATCAAACATAAAAT
CCCTTGACACTTCTGCACATTGGAGTCCTTTTGGGGACAAAAAGCAGAGA
CCCCACTCGGCATGTTTTTCATGATTTTCATGATTTTTGCAAATTTGGCA
TTTTTCATGGTTTTTAGCATGTTTTGGATCATTTTGGCATGTTTTTCAGA
GAAACATTAGGgaattttgtttatattgtcTCTTCTCTGTCCTGATATTC
AGATTCGTTAAAGATAGCTCAAAATAGCACTTTCAGCCcccaaaattcta
aaattttctcacttgcccaaccatggtgggcaacgttaaatattatttta
agttttcaataaATACCATTGACAGGAATGTTAAAACAAGGATGTGTCAG
GCAGGGGGGATCCATCTTTTCCAATGCTTAATAGGGAGGTAGGagatttc
cagaaaaaaattgggggtggaagattttagggggggggggggcaNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNggggggggggggtcaaggaAAAATTAGGGGGGTAACaacttttggtc
aaaatatctatcaggcgagaccaatttaatttgttgttctaagggcagat
cgttagcaaaatatgggtcggtcggtcggtaaaataagaatatatttttc
atttatcaggatTGGTAAAGTaccaaaaatgttttccaaaatatatctgg
ttcaaaaattcactttttttatctccgatgaagatcataataaaatctta
gtgtacggaatgcttgattttctaaattttttaatttcttgaattaattt
tcagctttattcaaatttgatacTTACacataactagtgtgtaaaatata
ttgtagtggaaattcaatattattattttcttgattttagcaaaaatagg
gtcggtcgggcccgtaggacaacaaattaaattggtcttgcCTCATATTT
ATATTGTTTTAGATATTTGGTATGGGACAACTAAAAAACAAGTGTAGATA
GCTAAATCTTTGCCTGGGGCACCATGTTAAACtctttttttcatataatt
tttgatacaaatttcaatgttttcggTTTTGAATGACTGGTGGACTGCTG
CTGGCAATAGCAcgggttcgaaattttttttaaataggggATACACATAT
AGCTTTATAAAACTCTACTTTATAAAACAAGTAGCCAATATTTGGATAAC
TTTTGTCAAGACTACATGTCACTGAACCGCCTCATTATTCTTTCAGGGTT
TAGACAGGTCCATGACCTCGGCAAAACAGGGTTTTTTTTAAGCAccaatt
tttaaaatgtctcTTGCATTATAGCTTGTATTTTAGTGTCTGGATATAca
tgatttttaaatatttctcctTTGGGGCCAACCTTGGTTTTTTCAGGAAC
AGGGCTCCCTAAGCTAAAATTTGCTTTATGTATGTACATTTTTCTGACTC
TTAGTTATATTGTTCCTACATTTCAATCAGTTATTTTCTAGTTTTCCAct
cttgaaaagacacttttatGGCATCTTGAAAATCATAAACTTTTCCTATT
gtccaaccatggtgggctacATTTTAAATTGCAGCCTTTGATTGATTAAT
ACATTCCAAGTGAAATGATTTCTACTTATGTTTGTGATATTTATTAGATT
ATATATCGATTTCTCATCATGTCTACATCACTGTTTTTAGGTACGGGAAA
CACGGGGACTTAGTTGATTAATAACTCTACTTTTTggcatgtttttcatg
tttttccatttaaaattagcaTTATTTAGCATTCTTTTCTGctctttttg
gcattttttcatgcatgttttttcaaaaatgccagTGGGATCTCTGAAAA
AGTAGCTACATTTGTCACCATATCTAAGAATCtcgaatgaaaatgaaatg
aaaacctaagacccgatgatgggagaagaatctcttgATCCGTAATCTCG
taatccaagccacgataaacttccaatatgaagtCTAAGAATGACTAAAC
TGAAAACGAAACAAGAGTCAAGGTATAGGTGGAAAATTCAGAATATTAAA
ATTCAGTCAGCATTTCAAAATTGTTACAATCGGTTTGCCTAAATGGGTTC
TTCAAGAAAATATCGGTTCATGGGGAGTAGAGGAtaaattgattttcaat
gtTCTACTCCTGGATATTTCGCTATATCTCCCGGGTGCGTGTTTCGACca
tgaaaaaaacattaaatcgacaccatggacatggcagtttttcacAACTT
TTTCAATACCAATGGACTCTAGTGTTACCGCAAAACGTTCATTGAAtttc
ttctttcatttcttttgcAGATGAATTTCATTACAACCATACTGCTTTTC
ATGATGATCTTTTTCGTGATGATTTTACTTGGACTCATTGACGTATCACC
CGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAATTTCTTGAAC
ATCTATTCTAAAATCAATCGAGAGGAAGAGCAGTTTTGGAAGTTTTTAAA
ACGACGAGCGCCATATTCAAAGGAAGCGAGAGTCTGTCAAGTCATTTGGC
CCCACATGTTGTCTATCCATGCAGGGAATGCTGGGATATTTGGAAATGTC
ATGGATGGTTTTTATGATAGAAGAAAGTCAGAATTATCAATCAGTCTTAG
TTGTACGGGttttaaaatgataaatatacaAAAGAAGACGAattaaaaaa
gatataaaattaTAGGCTCACTCTTTTGGAACACAAANATAATTTTTTGT
GACAATTATTtctagaaatttatgaaatttcaaTTTGACGTGAGTTGTGA
GTAGATAGCAGTTTTTGACCACATGCAAATGGTTTTATCCGTGAAAATTA
TATCTTGTGCGTCTACCATAGATTGACATGTGTATAGGAGCCCCCAGCGG
TAAGTCtaatcacgatatcacgcattttctttgtcttcaataaacagcaa
aaaaattggataatcatgcatccctttgaaaaagtctaaATCACGCatta
tggctcaaattttttcaaatcacgatcaacgttttgacctctgatcacgc
aatcacgaaaaaaaaaaatccaaatcacgtaatctcGCTAGAAAAAAGTC
ctcatcacgccatcacgaaaactgCTTGGGGGGCTCGTATAGGGACCTAA
CTTTGTAATGACCGAAACATTGAGGAccaaaactttttactttttgagtA
ATATTTATTTAGATTTAGTTTAGATGTATATCATTATATGTTATGTTATT
CCCTTGGTTTTCAGTTTGtgctttctttatttttgaacataTTTGAATTT
TAACCAGTTTTTTTCAGCGACTCGTTTCCTTTCGAAGTTTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006278XLOC_006278Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011215-exon-sc0000122-1491911889:462563..462627TCONS_00011215-exon-sc0000122-1491911889:462563..462627Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:462563..462627TCONS_00011215-exon-sc0000122-1510915933:462563..462627Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:462563..462627TCONS_00011215-exon-sc0000122-1575043694:462563..462627Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:463026..463088TCONS_00011215-exon-sc0000122-1491911889:463026..463088Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:463026..463088TCONS_00011215-exon-sc0000122-1510915933:463026..463088Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:463026..463088TCONS_00011215-exon-sc0000122-1575043694:463026..463088Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:463576..464022TCONS_00011215-exon-sc0000122-1491911889:463576..464022Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:463576..464022TCONS_00011215-exon-sc0000122-1510915933:463576..464022Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:463576..464022TCONS_00011215-exon-sc0000122-1575043694:463576..464022Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:465153..465210TCONS_00011215-exon-sc0000122-1491911889:465153..465210Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:465153..465210TCONS_00011215-exon-sc0000122-1510915933:465153..465210Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:465153..465210TCONS_00011215-exon-sc0000122-1575043694:465153..465210Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:465536..465580TCONS_00011215-exon-sc0000122-1491911889:465536..465580Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:465536..465580TCONS_00011215-exon-sc0000122-1510915933:465536..465580Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:465536..465580TCONS_00011215-exon-sc0000122-1575043694:465536..465580Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:466178..466222TCONS_00011215-exon-sc0000122-1491911889:466178..466222Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:466178..466222TCONS_00011215-exon-sc0000122-1510915933:466178..466222Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:466178..466222TCONS_00011215-exon-sc0000122-1575043694:466178..466222Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:469328..469435TCONS_00011215-exon-sc0000122-1491911889:469328..469435Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:469328..469435TCONS_00011215-exon-sc0000122-1510915933:469328..469435Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:469328..469435TCONS_00011215-exon-sc0000122-1575043694:469328..469435Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1491911889:472033..473056TCONS_00011215-exon-sc0000122-1491911889:472033..473056Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1510915933:472033..473056TCONS_00011215-exon-sc0000122-1510915933:472033..473056Clytia hemisphaericaexon
TCONS_00011215-exon-sc0000122-1575043694:472033..473056TCONS_00011215-exon-sc0000122-1575043694:472033..473056Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:462563..473056 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.69128	2.90728	2.9028	2.42442	0.620007	0.71016	1.36054	2.74534	5.03937	3.37429	2.73276	3.61065	2.74315	3.8749	2.20258	4.47287	2.90477	3.30212	2.84537	3.64613	1.36789	1.05016	0.568956	1.34119	0.111305	0.501811	1.37884	2.23875	1.46343	1.07764
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top