TCONS_00011202 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011202
Unique NameTCONS_00011202
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1692

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011202 ID=TCONS_00011202|Name=TCONS_00011202|organism=Clytia hemisphaerica|type=transcript|length=1692bp
ttttgagtcTGTACTTTGTATGTTTTCGAATTAAGGGCACAAAATTATTC
GTACGGTCACGTGACATCTGTATAGATTTTGTGTAAAGCAAAAGCTTTCT
TTCCACATCGAGCATTGGACAGTGTGTCACACTACACTCCTCGAAGTCTA
ACCCACATAATCTCAAGCTTAAAACTACAAAATGGCTGGACAAAGAAAAC
TTGGATTTGCCGAAAACTTTGCCCTCAGTGGTGCTGCCGCTGTTATCTCG
AAGACTGCTGCTGCCCCTATCGAACGAATCAAGTTGTTGGTTCAAAATCA
AGATGAGATGTTGAAACaaggaaaaatctcggaaccaTACAAAGGTGTTA
TCGATTGCACAGTCAAAACTTTCAGATCAGAAGgTATAATTCCATTCTGG
AGAGGTAACTTGGCCAACTGTATCAGATACTTCCCTACACAAGCCTTGAA
CTTTGCCTTCAAagacaaaatcaaaatcatgtTCAAACAAAGCAAGAATG
ACCCATATACAGTcaactttgcaaaaaatatcgCATCTGGTGGTTGTGCT
GGTGCTCTTTCACTCTGCTTTGTCTACTCTTTGGATTTCGCCCGTACCAA
GCTTGCTAACGATACTAAATCTGCTGGTAAAGGTGGATCACGTGAATACA
ATGGTTTAGTTGATGTTTACCGAAAGACCTTGAAATCTGATGGTATTCAA
GGTTTATACAGAGGTTTCGTCATTTCATGTGTTGGTATCATCGTCTACCG
TGGTTGCTACTTCGGATTCTACGACAGTTTGAAACCAATGCTTCTCGGTG
ATGATGCATCACTCTTCCTCTCTTTCTGTTTGGGTTATGGTGTTACCGTC
ACCTCCGGTTTGATCTCCTACCCAATTGATACCATCCGAAGACGTATGAT
GATGACCTCAGGACAAGCTGTCAAATACGACGGTGCCATTGACTGCACAA
GACAAATCTTAGCCAATGAAGGATTCATGTCCATGATGAAAGGTGCTGGT
GCTAACATTCTCCGTGGTGTTGCCGGAGCTGGTGTCTTGGCTGGATTCGA
TAAATTCAAGGAAGTTTACATGAACTACCGATTCAAAGAATAAATTATTT
ATTAAGCATGAAGAGATTATGCATATaggaactttttaaatttttagttt
tttaaaaagcttcGAGAGTGAGTGGTGTAAGAATTATTTTGTAACAAATT
TTGATCATCGTCCATCAACACATCGATACACTGTCCCTACCAAAATGTAg
acaacaattttttaattgtaaacGAAAAAGAGTCGTAGAAAAATTACCAT
GAAActgttttttagttttgatatTAATNtttttgaccaaaaagttatgt
ttttgaacgaatttctgcctaatggtccaggggaatttcaggcttaattt
agggaacccaaaatttgcgtacacatgaaattttttttattgaaatgtgt
tcattaGGTCCTTAGGAGTGAAAAACCATCGAGTGACACTTTTCACACCT
TGGGCATTTTCTNGTAGAAAAATTACCATGAAActgttttttagttttga
tatTAATTGTTTTTGTCCTTTTTGTTTCCACCTTTTTGTAAATTATGGCT
TACTAGAAGAATTTAGTAGCAAAATGAAATAGTCAACAACATAACAAATT
ATTGTTACACAAATATAACTCGTTTTTATATTTCTTGGTCGT
Run BLAST on NCBI

protein sequence of TCONS_00011202-protein

>TCONS_00011202-protein ID=TCONS_00011202-protein|Name=TCONS_00011202-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MAGQRKLGFAENFALSGAAAVISKTAAAPIERIKLLVQNQDEMLKQGKIS
EPYKGVIDCTVKTFRSEGIIPFWRGNLANCIRYFPTQALNFAFKDKIKIM
FKQSKNDPYTVNFAKNIASGGCAGALSLCFVYSLDFARTKLANDTKSAGK
GGSREYNGLVDVYRKTLKSDGIQGLYRGFVISCVGIIVYRGCYFGFYDSL
KPMLLGDDASLFLSFCLGYGVTVTSGLISYPIDTIRRRMMMTSGQAVKYD
GAIDCTRQILANEGFMSMMKGAGANILRGVAGAGVLAGFDKFKEVYMNYR
FKE
Run BLAST on NCBI

transcript from alignment at sc0000122:396594..402621+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011202 ID=TCONS_00011202|Name=TCONS_00011202|organism=Clytia hemisphaerica|type=transcript|length=6028bp|location=Sequence derived from alignment at sc0000122:396594..402621+ (Clytia hemisphaerica)
ttttgagtcTGTACTTTGTATGTTTTCGAATTAAGGGCACAAAATTATTC
GTACGGTCACGTGACATCTGTATAGATTTTGTGTAAAGCAAAAGCTTTCT
TTCCACATCGAGCATTGGACAGTGTGTCACACTACACTCCTCGAAGTCTA
ACCCACATAATCTCAAGCTTAAAACTACAAAGTAAGTGCGTTCGTTAGAT
AGATTTTTGCCACTGATATCTTGTGTCTTTCTCTGTACGTTTTATACCCA
ATTTACCTATCACTCTTAATTCAGGGTTTGGTTGCAAAAAAGAGCCTACT
TTTAAAGTAAGATGGTTTAAGCATGAAATATCAAACAGGTCTTATGCATT
TGCGTTTCTTCAGTTTATATTCATTATGTTATTCCAGTCTCTGGCTAGAT
TAGTGCTGTGTAGCTACAAAGATATGATATATTATAGGCGAAGGGAAGTT
AGGTATTAGTTTACCGTTACAATGAATTCATAATTCGAtgcggcaaaatt
tcatttttcattattcattattttaccATAAACTCTCCCACGCGAATAAT
CAAATGTAAACAGCAGTAGAACGTCTTCATTTTTTACTGGCGCACACTTG
TATTCTTTGTTTCACATTGCATTGGGCATGCATTGCATAATTGAAAGGGT
GGGTATATATTAGTTTAGTCACAGAATGTTTCAGAATCCATGCTgcaaaa
tttcaattattttcatttatttttaactTTGACACTCCTGTCCAATCCAG
TTTGCCCAGATGGTACCGtgaatggtcctaaatccgacagccctgcctaa
ttccgaccccccaaataaaggttatgaaaaaaaattctatgtttataCAA
ACACtccttctccaagttgaacgaaaaactattgcaagaattctcaaaac
aaattcaaaacatctaacaagatggctataatgtcaaaatgtcaataatg
taagttaaaaagtgcgagttgtaaaagTCTGAatgtaattaccttttatt
atCATTTATGATGTTTGACATATTGCAAAAAGAATTATGTTTCGTATAAG
AATTATTGTTAATTATTTGGTTCAACTGGTTTACTGTATCAAatttctca
gtttagttgacactttggtattttcGTTGCGTCATagcaaaaggtttttt
tattttagtttgtatctttgaaataccacgtcggatttaggcagggctgt
cggatttaggaccactcacggtattagTCAAATAACTTTGAACAACAATT
ACAATTGAACCGATGGAACATGGAACAAATGCGATCCAATGATTGCTTTT
CGATTGTCATAATAGTTGttgcaaacgatatcatccttCAGTGATTGGGA
ATCTATTATTGTCCGTTACAGAGTTGGAGGCCTTCTTGGGGACACTTGTT
TCCTGTGTATAGGGTTGAGAGCTAAACAATacgagagcgactgtattcac
ctcattgtaatacataaggNNCGTTAGTGTAGTAGTTGGTGGATTCCAAC
ACACTAGCAATGTGGAGATGGATTTCTCCCAATTCATCGTCTCTGACCag
tcagtagacaagaattcacttccagcTCTACCGAGTGGCAATTGAGTCAT
TGGGTTCCACATGGacccgtagctcaatggtagagcaaatgcccgcgaat
ggcatggttgtgagttcgagtctcgccggatccgttggttttccaacggt
tctggtggatGGTCAGTAAACAATacgagagcgactgtattcacctcatt
gtaatacataaggGCAATATTCATGATTATCTGTAATTGGCTTCAAAAAA
CAACACAAAGAGTCCTTTTTTAAGTCAACCAGGGcaaagttttaagctgt
attttttgactgaataaatattttttgaattttttttcgcatttatgacg
ttctaagattgaaaAATCTCTATAAAAATTAAGGTCAAGTATTATTTTat
aagaagttgattttcttcttcatttttcatctttacttttcaatttttta
aatctttactTTTTTAATGATATTCCACTCTGGATTATCTTttaaacgag
cacaaaaccgttTTCTAATtagaattctatcaaaagttacagcctttttt
tgtctccgctgcaaattatattgtgACAGACTTAAGTTGATCTGCaagaa
aacatcaaaaattattttgaactgCTTATCAACTGCTTTCTCCTTGCCAT
GTGAGTTTTGCCTAATCTTAAAGAACTTAAAGTTTCTTGTAAATGCCACC
TCAACCTACCTCTTTGTGGCTTCTGCTTTTACAGCCCTTGAGTCTGATGC
CTTAACATTTCCTTGAGGGACAAAATTAAAAACTAATTTCAATATTGAAA
TTAATAGGCTAAAATTTGGCAACACAGTAAAGCCATTACTCCTGAAGGCA
GGAAATTATGTTGATTGTTAAGGTCAATGTTGTTAAGGTTTACTAAATAT
GGGGAACATCTGTATACAAATTCTATGAACGTAATCGCAAATAGCTTCTC
TATTGGCAATAGAGTGTAAACAAGAACTTAAAAAGTCTGTTCtatgtttt
taagattttcagaaaGCATAAGATAAAGATTAACCAACCTGGAAAGTTTT
TTAGTTATCAATTTCTGTATTTTTGTTCTAACATACGGTAGTACTTTGTG
ATTCCAGTGCCGTAGCAACACATTCTTAACATCAAAGAAAGTATATATTC
TTAGCTTGAATTCATTGGTTTTTGGTGTATTTTCCCAGTGATGAAGATGG
TCTTAGTCATCAGTATAGGGTGTTAAATACAACGAATGATGGTTTTTATT
GATTGCCACTGTTACTTACCACTGTTAGGTAAAAATCTACAAATCATTGT
TTGTCTAAAATGCTTGACCACTGGATTCAATTAAAGCAATATTCCTTTTT
CAGATGGCTGGACAAAGAAAACTTGGATTTGCCGAAAACTTTGCCCTCAG
TGGTGCTGCCGCTGTTATCTCGAAGACTGCTGCTGCCCCTATCGAACGAA
TCAAGTTGTTGGTTCAAAATCAAGATGAGATGTTGAAACaaggaaaaatc
tcggaaccaTACAAAGGTGTTATCGATTGCACAGTCAAAACTTTCAGATC
AGAAGGTAAAAAGtactctttgtttttttttatttctttttgtgaGTGGT
GGTCATTCAGGTTAAATTTTAAGGCAGAGCAGTGTTTCGAAATAACGGTc
agacattgtccgacccaaaaatcataattttcaagctaaagcagcCCTGA
TCAGACATTTTGTCCgtgtccgacccacttgaaatcgttatttcgagcct
ttaggggtcaaaaagggcactttttgctcctattttttttctcataaaaa
gtCCTTTTTCACTATTACTTTTCACAATTTCCTAAATTCAACttgttatt
gaattttttacCAACACTTTTGGTTTCTACCCATACAGCAATTTANGTTT
CGAAATAACGGTCAGACATTGTCCGActcaaaaatcataattttcaagct
aaagcagcCCTGATCAGACATTTTGTCCgtgtccgacccacttgaaattg
ttatttcgagcctttaggggtcaaaaagggcactttttcactattacttt
tcacaatttcataaattcaacttgttattgaattttttacTAACATTTTT
GGTTTCTACCCATAcagcaatttagcagactcgaaTCTGAGCTGTAAgta
aaactttttgaatttcaggTATAATTCCATTCTGGAGAGGTAACTTGGCC
AACTGTATCAGATACTTCCCTACACAAGCCTTGAACTTTGCCTTCAAaga
caaaatcaaaatcatgtTCAAACAAAGCAAGAATGACCCATATACAGTca
actttgcaaaaaatatcgCATCTGGTGGTTGTGCTGGTGCTCTTTCACTC
TGCTTTGTCTACTCTTTGGATTTCGCCCGTACCAAGCTTGCTAACGATAC
TAAATCTGCTGGTAAAGGTAAAGAAGCATCTTTTTGTATGGGCTATTTTT
GAATGTCTTTAATAAATTTTCTGAACATTTTGGTTTTCTTGTAGCTACTT
CAAATTGAATTGTCCCTCCAGTACAATCAATATATTATGTATGTGCTGCT
TATTTAAAGCTTATACTTATTTAAAGCTTCAACATTTTACGTTTTCTATT
ATGTATGTGTAAATTACAATTACTAATTATTTCGATACCTTTCTTAAATA
GGTGGATCACGTGAATACAATGGTTTAGTTGATGTTTACCGAAAGACCTT
GAAATCTGATGGTATTCAAGGTTTATACAGAGGTTTCGTCATTTCATGTG
TTGGTATCATCGTCTACCGTGGTTGCTACTTCGGATTCTACGACAGTTTG
AAACCAATGCTTCTCGGTGATGATGCATCACTCTTCCTCTCTTTCTGTTT
GGGTTATGGTAAGGCTATTTTacgttattttttgttttggatgAATAGAA
ATATCATGGTTCTTGTTTCAAACTCTGAAACTTATACATCGAATAATAAA
GCCTGAAATTTTTACAGCTAGCTCAGCAGCTATTCATTGATTTTCAGATT
TCATGCACGTCCACTAAAAAGTTAAATATGAACTTAaacaattaatattt
ttttaatgtagGTGTTACCGTCACCTCCGGTTTGATCTCCTACCCAATTG
ATACCATCCGAAGACGTATGATGATGACCTCAGGACAAGCTGTCAAATAC
GACGGTGCCATTGACTGCACAAGACAAATCTTAGCCAATGAAGGATTCAT
GTCCATGATGAAAGGTATGTTGTATACTTTGTCCTACTTGCTGCCTTGCT
CTCTTTCGAACCATTAATCAGCATACGAAGTTATGTTCAGTCCGTCTGTC
TACTTTCGTCTAAATTATCGTCAACAACTTTAaaatactttgaaataaaa
cttttttcccATTATCGGAAACGATAGAAAAAATTATCGCCCAGGTAATT
AATTGTGGATGGACCACAAAGACCAGTAAATGACACATATTTAGACTTTA
GACTCCGTCCAAACTAGAGACAAGAGCGAggttatgtattcgagataaat
cgagggggacggtataaagcaaagttgacatggggccgaaatcaccgtcc
actttgctcgacgacggtaaaaacaccaagataccgtcgtctgtttaggt
gagcaaaggcgatatagaacCTTAGAACAACTATCGACTTtattttgtat
cgatttcacttaccgccGCCTTCGATATCCTCTGATACATAAACTCAGTA
AGATTGAGGTAGAGTCGGTCATTTAAGTCAAGAAACTTTTGTTCCTAATC
TCTAAATTGTTTCATTGTTAACTTTCAGGTGCTGGTGCTAACATTCTCCG
TGGTGTTGCCGGAGCTGGTGTCTTGGCTGGATTCGATAAATTCAAGGAAG
TTTACATGAACTACCGATTCAAAGAATAAATTATTTATTAAGCATGAAGA
GATTATGCATATaggaactttttaaatttttagttttttaaaaagcttcG
AGAGTGAGTGGTGTAAGAATTATTTTGTAACAAATTTTGATCATCGTCCA
TCAACACATCGATACACTGTCCCTACCAAAATGTAgacaacaatttttta
attgtaaacGAAAAAGAGTCGTAGAAAAATTACCATGAAActgtttttta
gttttgatatTAATNtttttgaccaaaaagttatgtttttgaacgaattt
ctgcctaatggtccaggggaatttcaggcttaatttagggaacccaaaat
ttgcgtacacatgaaattttttttattgaaatgtgttcattaGGTCCTTA
GGAGTGAAAAACCATCGAGTGACACTTTTCACACCTTGGGCATTTTCTNG
TAGAAAAATTACCATGAAActgttttttagttttgatatTAATTGTTTTT
GTCCTTTTTGTTTCCACCTTTTTGTAAATTATGGCTTACTAGAAGAATTT
AGTAGCAAAATGAAATAGTCAACAACATAACAAATTATTGTTACACAAAT
ATAACTCGTTTTTATATTTCTTGGTCGT

Coding sequence (CDS) from alignment at sc0000122:396594..402621+

>TCONS_00011202 ID=TCONS_00011202|Name=TCONS_00011202|organism=Clytia hemisphaerica|type=CDS|length=4560bp|location=Sequence derived from alignment at sc0000122:396594..402621+ (Clytia hemisphaerica)
ATGGCTGGACAAAGAAAACTTGGATTTGCCGAAAACTTTGCCCTCAGTGG
TGCTGCCGCTGTTATCTCGAAGACTGCTGCTGCCCCTATCGAACGAATCA
AGTTGTTGGTTCAAAATCAAGATGAGATGTTGAAACaaggaaaaatctcg
gaaccaTACAAAGGTGTTATCGATTGCACAGTCAAAACTTTCAGATCAGA
AGgTATAATTCCATTCTGGAGAGGTAACTTGGCCAACTGTATCAGATACT
TCCCTACACAAGCCTTGAACTTTGCCTTCAAagacaaaatcaaaatcatg
tTCAAACAAAGCAAGAATGACCCATATACAGTcaactttgcaaaaaatat
cgCATCTGGTGGTTGTGCTGGTGCTCTTTCACTCTGCTTTGTCTACTCTT
TGGATTTCGCCCGTACCAAGCTTGCTAACGATACTAAATCTGCTGGTAAA
GGTGGATCACGTGAATACAATGGTTTAGTTGATGTTTACCGAAAGACCTT
GAAATCTGATGGTATTCAAGGTTTATACAGAGGTTTCGTCATTTCATGTG
TTGGTATCATCGTCTACCGTGGTTGCTACTTCGGATTCTACGACAGTTTG
AAACCAATGCTTCTCGGTGATGATGCATCACTCTTCCTCTCTTTCTGTTT
GGGTTATGGTGTTACCGTCACCTCCGGTTTGATCTCCTACCCAATTGATA
CCATCCGAAGACGTATGATGATGACCTCAGGACAAGCTGTCAAATACGAC
GGTGCCATTGACTGCACAAGACAAATCTTAGCCAATGAAGGATTCATGTC
CATGATGAAAGGTGCTGGTGCTAACATTCTCCGTGGTGTTGCCGGAGCTG
GTGTCTTGGCTGGATTCGATAAATTCAAGGAAGTTTACATGAACTACCGA
TTCAAAGAATAAATGGCTGGACAAAGAAAACTTGGATTTGCCGAAAACTT
TGCCCTCAGTGGTGCTGCCGCTGTTATCTCGAAGACTGCTGCTGCCCCTA
TCGAACGAATCAAGTTGTTGGTTCAAAATCAAGATGAGATGTTGAAACaa
ggaaaaatctcggaaccaTACAAAGGTGTTATCGATTGCACAGTCAAAAC
TTTCAGATCAGAAGgTATAATTCCATTCTGGAGAGGTAACTTGGCCAACT
GTATCAGATACTTCCCTACACAAGCCTTGAACTTTGCCTTCAAagacaaa
atcaaaatcatgtTCAAACAAAGCAAGAATGACCCATATACAGTcaactt
tgcaaaaaatatcgCATCTGGTGGTTGTGCTGGTGCTCTTTCACTCTGCT
TTGTCTACTCTTTGGATTTCGCCCGTACCAAGCTTGCTAACGATACTAAA
TCTGCTGGTAAAGGTGGATCACGTGAATACAATGGTTTAGTTGATGTTTA
CCGAAAGACCTTGAAATCTGATGGTATTCAAGGTTTATACAGAGGTTTCG
TCATTTCATGTGTTGGTATCATCGTCTACCGTGGTTGCTACTTCGGATTC
TACGACAGTTTGAAACCAATGCTTCTCGGTGATGATGCATCACTCTTCCT
CTCTTTCTGTTTGGGTTATGGTGTTACCGTCACCTCCGGTTTGATCTCCT
ACCCAATTGATACCATCCGAAGACGTATGATGATGACCTCAGGACAAGCT
GTCAAATACGACGGTGCCATTGACTGCACAAGACAAATCTTAGCCAATGA
AGGATTCATGTCCATGATGAAAGGTGCTGGTGCTAACATTCTCCGTGGTG
TTGCCGGAGCTGGTGTCTTGGCTGGATTCGATAAATTCAAGGAAGTTTAC
ATGAACTACCGATTCAAAGAATAAATGGCTGGACAAAGAAAACTTGGATT
TGCCGAAAACTTTGCCCTCAGTGGTGCTGCCGCTGTTATCTCGAAGACTG
CTGCTGCCCCTATCGAACGAATCAAGTTGTTGGTTCAAAATCAAGATGAG
ATGTTGAAACaaggaaaaatctcggaaccaTACAAAGGTGTTATCGATTG
CACAGTCAAAACTTTCAGATCAGAAGgTATAATTCCATTCTGGAGAGGTA
ACTTGGCCAACTGTATCAGATACTTCCCTACACAAGCCTTGAACTTTGCC
TTCAAagacaaaatcaaaatcatgtTCAAACAAAGCAAGAATGACCCATA
TACAGTcaactttgcaaaaaatatcgCATCTGGTGGTTGTGCTGGTGCTC
TTTCACTCTGCTTTGTCTACTCTTTGGATTTCGCCCGTACCAAGCTTGCT
AACGATACTAAATCTGCTGGTAAAGGTGGATCACGTGAATACAATGGTTT
AGTTGATGTTTACCGAAAGACCTTGAAATCTGATGGTATTCAAGGTTTAT
ACAGAGGTTTCGTCATTTCATGTGTTGGTATCATCGTCTACCGTGGTTGC
TACTTCGGATTCTACGACAGTTTGAAACCAATGCTTCTCGGTGATGATGC
ATCACTCTTCCTCTCTTTCTGTTTGGGTTATGGTGTTACCGTCACCTCCG
GTTTGATCTCCTACCCAATTGATACCATCCGAAGACGTATGATGATGACC
TCAGGACAAGCTGTCAAATACGACGGTGCCATTGACTGCACAAGACAAAT
CTTAGCCAATGAAGGATTCATGTCCATGATGAAAGGTGCTGGTGCTAACA
TTCTCCGTGGTGTTGCCGGAGCTGGTGTCTTGGCTGGATTCGATAAATTC
AAGGAAGTTTACATGAACTACCGATTCAAAGAATAAATGGCTGGACAAAG
AAAACTTGGATTTGCCGAAAACTTTGCCCTCAGTGGTGCTGCCGCTGTTA
TCTCGAAGACTGCTGCTGCCCCTATCGAACGAATCAAGTTGTTGGTTCAA
AATCAAGATGAGATGTTGAAACaaggaaaaatctcggaaccaTACAAAGG
TGTTATCGATTGCACAGTCAAAACTTTCAGATCAGAAGgTATAATTCCAT
TCTGGAGAGGTAACTTGGCCAACTGTATCAGATACTTCCCTACACAAGCC
TTGAACTTTGCCTTCAAagacaaaatcaaaatcatgtTCAAACAAAGCAA
GAATGACCCATATACAGTcaactttgcaaaaaatatcgCATCTGGTGGTT
GTGCTGGTGCTCTTTCACTCTGCTTTGTCTACTCTTTGGATTTCGCCCGT
ACCAAGCTTGCTAACGATACTAAATCTGCTGGTAAAGGTGGATCACGTGA
ATACAATGGTTTAGTTGATGTTTACCGAAAGACCTTGAAATCTGATGGTA
TTCAAGGTTTATACAGAGGTTTCGTCATTTCATGTGTTGGTATCATCGTC
TACCGTGGTTGCTACTTCGGATTCTACGACAGTTTGAAACCAATGCTTCT
CGGTGATGATGCATCACTCTTCCTCTCTTTCTGTTTGGGTTATGGTGTTA
CCGTCACCTCCGGTTTGATCTCCTACCCAATTGATACCATCCGAAGACGT
ATGATGATGACCTCAGGACAAGCTGTCAAATACGACGGTGCCATTGACTG
CACAAGACAAATCTTAGCCAATGAAGGATTCATGTCCATGATGAAAGGTG
CTGGTGCTAACATTCTCCGTGGTGTTGCCGGAGCTGGTGTCTTGGCTGGA
TTCGATAAATTCAAGGAAGTTTACATGAACTACCGATTCAAAGAATAAAT
GGCTGGACAAAGAAAACTTGGATTTGCCGAAAACTTTGCCCTCAGTGGTG
CTGCCGCTGTTATCTCGAAGACTGCTGCTGCCCCTATCGAACGAATCAAG
TTGTTGGTTCAAAATCAAGATGAGATGTTGAAACaaggaaaaatctcgga
accaTACAAAGGTGTTATCGATTGCACAGTCAAAACTTTCAGATCAGAAG
gTATAATTCCATTCTGGAGAGGTAACTTGGCCAACTGTATCAGATACTTC
CCTACACAAGCCTTGAACTTTGCCTTCAAagacaaaatcaaaatcatgtT
CAAACAAAGCAAGAATGACCCATATACAGTcaactttgcaaaaaatatcg
CATCTGGTGGTTGTGCTGGTGCTCTTTCACTCTGCTTTGTCTACTCTTTG
GATTTCGCCCGTACCAAGCTTGCTAACGATACTAAATCTGCTGGTAAAGG
TGGATCACGTGAATACAATGGTTTAGTTGATGTTTACCGAAAGACCTTGA
AATCTGATGGTATTCAAGGTTTATACAGAGGTTTCGTCATTTCATGTGTT
GGTATCATCGTCTACCGTGGTTGCTACTTCGGATTCTACGACAGTTTGAA
ACCAATGCTTCTCGGTGATGATGCATCACTCTTCCTCTCTTTCTGTTTGG
GTTATGGTGTTACCGTCACCTCCGGTTTGATCTCCTACCCAATTGATACC
ATCCGAAGACGTATGATGATGACCTCAGGACAAGCTGTCAAATACGACGG
TGCCATTGACTGCACAAGACAAATCTTAGCCAATGAAGGATTCATGTCCA
TGATGAAAGGTGCTGGTGCTAACATTCTCCGTGGTGTTGCCGGAGCTGGT
GTCTTGGCTGGATTCGATAAATTCAAGGAAGTTTACATGAACTACCGATT
CAAAGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006276XLOC_006276Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011202-proteinTCONS_00011202-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011202-exon-sc0000122-1491911889:396594..396774TCONS_00011202-exon-sc0000122-1491911889:396594..396774Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:396594..396774TCONS_00011202-exon-sc0000122-1510915933:396594..396774Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:396594..396774TCONS_00011202-exon-sc0000122-1575043694:396594..396774Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1491911889:399497..399698TCONS_00011202-exon-sc0000122-1491911889:399497..399698Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:399497..399698TCONS_00011202-exon-sc0000122-1510915933:399497..399698Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:399497..399698TCONS_00011202-exon-sc0000122-1575043694:399497..399698Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1491911889:400312..400560TCONS_00011202-exon-sc0000122-1491911889:400312..400560Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:400312..400560TCONS_00011202-exon-sc0000122-1510915933:400312..400560Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:400312..400560TCONS_00011202-exon-sc0000122-1575043694:400312..400560Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1491911889:400795..401001TCONS_00011202-exon-sc0000122-1491911889:400795..401001Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:400795..401001TCONS_00011202-exon-sc0000122-1510915933:400795..401001Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:400795..401001TCONS_00011202-exon-sc0000122-1575043694:400795..401001Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1491911889:401205..401357TCONS_00011202-exon-sc0000122-1491911889:401205..401357Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:401205..401357TCONS_00011202-exon-sc0000122-1510915933:401205..401357Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:401205..401357TCONS_00011202-exon-sc0000122-1575043694:401205..401357Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1491911889:401922..402621TCONS_00011202-exon-sc0000122-1491911889:401922..402621Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1510915933:401922..402621TCONS_00011202-exon-sc0000122-1510915933:401922..402621Clytia hemisphaericaexon
TCONS_00011202-exon-sc0000122-1575043694:401922..402621TCONS_00011202-exon-sc0000122-1575043694:401922..402621Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:396594..402621 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2311.58	2446.01	2392.69	2491.81	1380.63	1072.25	1627.98	1760.21	3154.73	2743.93	3653.34	4106.27	3545.71	3396.18	3141.02	3195.48	3713.66	4240.72	2196.01	2368.62	3979.78	4017.5	2869.08	2858.36	2191.88	2277.06	3241.37	3538.51	2529.32	2648.75
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR002113Aden_trnslctor
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0005215 transporter activity
Blast
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BLAST of TCONS_00011202 vs. Swiss-Prot (Human)
Match: ADT3 (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 278.87 bits (712), Expect = 1.937e-88
Identity = 152/298 (51.01%), Postives = 200/298 (67.11%), Query Frame = 2 
Query:  191 QRKLGFAENFALSGAAAVISKTAAAPIERIKLLVQNQDEMLKQGKISEPYKGVIDCTVKTFRSEGIIPFWRGNLANCIRYFPTQALNFAFKDKIKIMF--KQSKNDPYTVNFAKNIASGGCAGALSLCFVYSLDFARTKLANDTKSAGKGGSREYNGLVDVYRKTLKSDGIQGLYRGFVISCVGIIVYRGCYFGFYDSLKPMLLG-DDASLFLSFCLGYGVTVTSGLISYPIDTIRRRMMMTSGQA---VKYDGAIDCTRQILANEGFMSMMKGAGANILRXXXXXXXXXXFDKFKEV 1066
            ++ + FA++F   G AA ISKTA APIER+KLL+Q Q    KQ    + YKG++DC V+  + +G++ FWRGNLAN IRYFPTQALNFAFKDK K +F     K+  +   FA N+ASGG AGA SLCFVY LDFART+LA D   +G    RE+ GL D   K  KSDGI+GLY+GF +S  GII+YR  YFG YD+ K ML    +  + +S+ +   VT  +G++SYP DT+RRRMMM SG+    + Y G +DC R+I  +EG  +  KGA +N+LRG+ GA VL  +D+ K+V
Sbjct:    3 EQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGT--EREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297
The following BLAST results are available for this feature:
BLAST of TCONS_00011202 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADT31.937e-8851.01ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]
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