XLOC_006276 (gene) - C. hemisphaerica

Overview
NameXLOC_006276
Unique NameXLOC_006276
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:396594..402621+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006276 ID=XLOC_006276|Name=XLOC_006276|organism=Clytia hemisphaerica|type=gene|length=6028bp|location=Sequence derived from alignment at sc0000122:396594..402621+ (Clytia hemisphaerica)
ttttgagtcTGTACTTTGTATGTTTTCGAATTAAGGGCACAAAATTATTC GTACGGTCACGTGACATCTGTATAGATTTTGTGTAAAGCAAAAGCTTTCT TTCCACATCGAGCATTGGACAGTGTGTCACACTACACTCCTCGAAGTCTA ACCCACATAATCTCAAGCTTAAAACTACAAAGTAAGTGCGTTCGTTAGAT AGATTTTTGCCACTGATATCTTGTGTCTTTCTCTGTACGTTTTATACCCA ATTTACCTATCACTCTTAATTCAGGGTTTGGTTGCAAAAAAGAGCCTACT TTTAAAGTAAGATGGTTTAAGCATGAAATATCAAACAGGTCTTATGCATT TGCGTTTCTTCAGTTTATATTCATTATGTTATTCCAGTCTCTGGCTAGAT TAGTGCTGTGTAGCTACAAAGATATGATATATTATAGGCGAAGGGAAGTT AGGTATTAGTTTACCGTTACAATGAATTCATAATTCGAtgcggcaaaatt tcatttttcattattcattattttaccATAAACTCTCCCACGCGAATAAT CAAATGTAAACAGCAGTAGAACGTCTTCATTTTTTACTGGCGCACACTTG TATTCTTTGTTTCACATTGCATTGGGCATGCATTGCATAATTGAAAGGGT GGGTATATATTAGTTTAGTCACAGAATGTTTCAGAATCCATGCTgcaaaa tttcaattattttcatttatttttaactTTGACACTCCTGTCCAATCCAG TTTGCCCAGATGGTACCGtgaatggtcctaaatccgacagccctgcctaa ttccgaccccccaaataaaggttatgaaaaaaaattctatgtttataCAA ACACtccttctccaagttgaacgaaaaactattgcaagaattctcaaaac aaattcaaaacatctaacaagatggctataatgtcaaaatgtcaataatg taagttaaaaagtgcgagttgtaaaagTCTGAatgtaattaccttttatt atCATTTATGATGTTTGACATATTGCAAAAAGAATTATGTTTCGTATAAG AATTATTGTTAATTATTTGGTTCAACTGGTTTACTGTATCAAatttctca gtttagttgacactttggtattttcGTTGCGTCATagcaaaaggtttttt tattttagtttgtatctttgaaataccacgtcggatttaggcagggctgt cggatttaggaccactcacggtattagTCAAATAACTTTGAACAACAATT ACAATTGAACCGATGGAACATGGAACAAATGCGATCCAATGATTGCTTTT CGATTGTCATAATAGTTGttgcaaacgatatcatccttCAGTGATTGGGA ATCTATTATTGTCCGTTACAGAGTTGGAGGCCTTCTTGGGGACACTTGTT TCCTGTGTATAGGGTTGAGAGCTAAACAATacgagagcgactgtattcac ctcattgtaatacataaggNNCGTTAGTGTAGTAGTTGGTGGATTCCAAC ACACTAGCAATGTGGAGATGGATTTCTCCCAATTCATCGTCTCTGACCag tcagtagacaagaattcacttccagcTCTACCGAGTGGCAATTGAGTCAT TGGGTTCCACATGGacccgtagctcaatggtagagcaaatgcccgcgaat ggcatggttgtgagttcgagtctcgccggatccgttggttttccaacggt tctggtggatGGTCAGTAAACAATacgagagcgactgtattcacctcatt gtaatacataaggGCAATATTCATGATTATCTGTAATTGGCTTCAAAAAA CAACACAAAGAGTCCTTTTTTAAGTCAACCAGGGcaaagttttaagctgt attttttgactgaataaatattttttgaattttttttcgcatttatgacg ttctaagattgaaaAATCTCTATAAAAATTAAGGTCAAGTATTATTTTat aagaagttgattttcttcttcatttttcatctttacttttcaatttttta aatctttactTTTTTAATGATATTCCACTCTGGATTATCTTttaaacgag cacaaaaccgttTTCTAATtagaattctatcaaaagttacagcctttttt tgtctccgctgcaaattatattgtgACAGACTTAAGTTGATCTGCaagaa aacatcaaaaattattttgaactgCTTATCAACTGCTTTCTCCTTGCCAT GTGAGTTTTGCCTAATCTTAAAGAACTTAAAGTTTCTTGTAAATGCCACC TCAACCTACCTCTTTGTGGCTTCTGCTTTTACAGCCCTTGAGTCTGATGC CTTAACATTTCCTTGAGGGACAAAATTAAAAACTAATTTCAATATTGAAA TTAATAGGCTAAAATTTGGCAACACAGTAAAGCCATTACTCCTGAAGGCA GGAAATTATGTTGATTGTTAAGGTCAATGTTGTTAAGGTTTACTAAATAT GGGGAACATCTGTATACAAATTCTATGAACGTAATCGCAAATAGCTTCTC TATTGGCAATAGAGTGTAAACAAGAACTTAAAAAGTCTGTTCtatgtttt taagattttcagaaaGCATAAGATAAAGATTAACCAACCTGGAAAGTTTT TTAGTTATCAATTTCTGTATTTTTGTTCTAACATACGGTAGTACTTTGTG ATTCCAGTGCCGTAGCAACACATTCTTAACATCAAAGAAAGTATATATTC TTAGCTTGAATTCATTGGTTTTTGGTGTATTTTCCCAGTGATGAAGATGG TCTTAGTCATCAGTATAGGGTGTTAAATACAACGAATGATGGTTTTTATT GATTGCCACTGTTACTTACCACTGTTAGGTAAAAATCTACAAATCATTGT TTGTCTAAAATGCTTGACCACTGGATTCAATTAAAGCAATATTCCTTTTT CAGATGGCTGGACAAAGAAAACTTGGATTTGCCGAAAACTTTGCCCTCAG TGGTGCTGCCGCTGTTATCTCGAAGACTGCTGCTGCCCCTATCGAACGAA TCAAGTTGTTGGTTCAAAATCAAGATGAGATGTTGAAACaaggaaaaatc tcggaaccaTACAAAGGTGTTATCGATTGCACAGTCAAAACTTTCAGATC AGAAGGTAAAAAGtactctttgtttttttttatttctttttgtgaGTGGT GGTCATTCAGGTTAAATTTTAAGGCAGAGCAGTGTTTCGAAATAACGGTc agacattgtccgacccaaaaatcataattttcaagctaaagcagcCCTGA TCAGACATTTTGTCCgtgtccgacccacttgaaatcgttatttcgagcct ttaggggtcaaaaagggcactttttgctcctattttttttctcataaaaa gtCCTTTTTCACTATTACTTTTCACAATTTCCTAAATTCAACttgttatt gaattttttacCAACACTTTTGGTTTCTACCCATACAGCAATTTANGTTT CGAAATAACGGTCAGACATTGTCCGActcaaaaatcataattttcaagct aaagcagcCCTGATCAGACATTTTGTCCgtgtccgacccacttgaaattg ttatttcgagcctttaggggtcaaaaagggcactttttcactattacttt tcacaatttcataaattcaacttgttattgaattttttacTAACATTTTT GGTTTCTACCCATAcagcaatttagcagactcgaaTCTGAGCTGTAAgta aaactttttgaatttcaggTATAATTCCATTCTGGAGAGGTAACTTGGCC AACTGTATCAGATACTTCCCTACACAAGCCTTGAACTTTGCCTTCAAaga caaaatcaaaatcatgtTCAAACAAAGCAAGAATGACCCATATACAGTca actttgcaaaaaatatcgCATCTGGTGGTTGTGCTGGTGCTCTTTCACTC TGCTTTGTCTACTCTTTGGATTTCGCCCGTACCAAGCTTGCTAACGATAC TAAATCTGCTGGTAAAGGTAAAGAAGCATCTTTTTGTATGGGCTATTTTT GAATGTCTTTAATAAATTTTCTGAACATTTTGGTTTTCTTGTAGCTACTT CAAATTGAATTGTCCCTCCAGTACAATCAATATATTATGTATGTGCTGCT TATTTAAAGCTTATACTTATTTAAAGCTTCAACATTTTACGTTTTCTATT ATGTATGTGTAAATTACAATTACTAATTATTTCGATACCTTTCTTAAATA GGTGGATCACGTGAATACAATGGTTTAGTTGATGTTTACCGAAAGACCTT GAAATCTGATGGTATTCAAGGTTTATACAGAGGTTTCGTCATTTCATGTG TTGGTATCATCGTCTACCGTGGTTGCTACTTCGGATTCTACGACAGTTTG AAACCAATGCTTCTCGGTGATGATGCATCACTCTTCCTCTCTTTCTGTTT GGGTTATGGTAAGGCTATTTTacgttattttttgttttggatgAATAGAA ATATCATGGTTCTTGTTTCAAACTCTGAAACTTATACATCGAATAATAAA GCCTGAAATTTTTACAGCTAGCTCAGCAGCTATTCATTGATTTTCAGATT TCATGCACGTCCACTAAAAAGTTAAATATGAACTTAaacaattaatattt ttttaatgtagGTGTTACCGTCACCTCCGGTTTGATCTCCTACCCAATTG ATACCATCCGAAGACGTATGATGATGACCTCAGGACAAGCTGTCAAATAC GACGGTGCCATTGACTGCACAAGACAAATCTTAGCCAATGAAGGATTCAT GTCCATGATGAAAGGTATGTTGTATACTTTGTCCTACTTGCTGCCTTGCT CTCTTTCGAACCATTAATCAGCATACGAAGTTATGTTCAGTCCGTCTGTC TACTTTCGTCTAAATTATCGTCAACAACTTTAaaatactttgaaataaaa cttttttcccATTATCGGAAACGATAGAAAAAATTATCGCCCAGGTAATT AATTGTGGATGGACCACAAAGACCAGTAAATGACACATATTTAGACTTTA GACTCCGTCCAAACTAGAGACAAGAGCGAggttatgtattcgagataaat cgagggggacggtataaagcaaagttgacatggggccgaaatcaccgtcc actttgctcgacgacggtaaaaacaccaagataccgtcgtctgtttaggt gagcaaaggcgatatagaacCTTAGAACAACTATCGACTTtattttgtat cgatttcacttaccgccGCCTTCGATATCCTCTGATACATAAACTCAGTA AGATTGAGGTAGAGTCGGTCATTTAAGTCAAGAAACTTTTGTTCCTAATC TCTAAATTGTTTCATTGTTAACTTTCAGGTGCTGGTGCTAACATTCTCCG TGGTGTTGCCGGAGCTGGTGTCTTGGCTGGATTCGATAAATTCAAGGAAG TTTACATGAACTACCGATTCAAAGAATAAATTATTTATTAAGCATGAAGA GATTATGCATATaggaactttttaaatttttagttttttaaaaagcttcG AGAGTGAGTGGTGTAAGAATTATTTTGTAACAAATTTTGATCATCGTCCA TCAACACATCGATACACTGTCCCTACCAAAATGTAgacaacaatttttta attgtaaacGAAAAAGAGTCGTAGAAAAATTACCATGAAActgtttttta gttttgatatTAATNtttttgaccaaaaagttatgtttttgaacgaattt ctgcctaatggtccaggggaatttcaggcttaatttagggaacccaaaat ttgcgtacacatgaaattttttttattgaaatgtgttcattaGGTCCTTA GGAGTGAAAAACCATCGAGTGACACTTTTCACACCTTGGGCATTTTCTNG TAGAAAAATTACCATGAAActgttttttagttttgatatTAATTGTTTTT GTCCTTTTTGTTTCCACCTTTTTGTAAATTATGGCTTACTAGAAGAATTT AGTAGCAAAATGAAATAGTCAACAACATAACAAATTATTGTTACACAAAT ATAACTCGTTTTTATATTTCTTGGTCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011202TCONS_00011202Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011202-proteinTCONS_00011202-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:396594..402621 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC25A5ADP/ATP translocase 2 Homo Sapiens
SLC25A6ADP/ATP translocase 3 Homo Sapiens
SLC25A4ADP/ATP translocase 1 Homo Sapiens
SLC25A31PREDICTED: ADP/ATP translocase 4 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2311.58 2446.01 2392.69 2491.81 1380.63 1072.25 1627.98 1760.21 3154.73 2743.93 3653.34 4106.27 3545.71 3396.18 3141.02 3195.48 3713.66 4240.72 2196.01 2368.62 3979.78 4017.5 2869.08 2858.36 2191.88 2277.06 3241.37 3538.51 2529.32 2648.75