TCONS_00010732 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010732
Unique NameTCONS_00010732
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length764

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010732 ID=TCONS_00010732|Name=TCONS_00010732|organism=Clytia hemisphaerica|type=transcript|length=764bp
GGTTTAGCGTAGTTTTGGCATACTATGGAATTTCTCTTGCATCCGATAAT
CTGGGTGGAAACATGTACCGCGATTTCGCTTTGACGACCATTGTCGAATT
CCCAGCCAACATTTTATTAATGTACTTCTTGAATTTAATTGGCCGGCGCA
ACACGATTGGTGGAAGTATAATTGTGAGTGGAATCTCATGTCTAGCTGTT
GCTTTTATACCAAAACAAGGAGTTTACAATTGGATCCGTGTAGCGATGGG
AATGTTTGGCAAATTCTGGATCACTTTCGCTTTCAGTGGTGTGTACATTT
GGTCCGCAGAACTCTATCCAACGGTCATCAGAGCACAAGGACTTGGAGTA
ATGATGGTTGCCAGCCGCATCGGTGGTTCAGCGGCGCCTTGGGTGGcgca
atatttgagaaaatatgGAGACTTTGTACCGTTTTTAGTAATGGGAACAC
TTTCATTGGTCAGTGCTTTGTTATGCTTCAAATTGAAAGAAACAAATGGA
AAACCATTGGCTGATACTTTGGAAGAATTTTACGCAATATCAAAGATTGT
AAAGGAAAGTCAGCCATCGAGAATCAACTCAACAAAAACGCCGAATCTGC
CATCTGATGTGAAATGATAGACTGGATAGACACCCTTCACAATTTGGAGG
TCCTAATAGTTTGTTATCATTATACAATTGTAAAAAGTCGTTGTAAAAAG
AATTTGATCTGAATGAATGATAAATAAACCGTTATCAAGACGTAAAAATA
CAGTTAAATTGCAG
Run BLAST on NCBI

protein sequence of TCONS_00010732-protein

>TCONS_00010732-protein ID=TCONS_00010732-protein|Name=TCONS_00010732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
FSVVLAYYGISLASDNLGGNMYRDFALTTIVEFPANILLMYFLNLIGRRN
TIGGSIIVSGISCLAVAFIPKQGVYNWIRVAMGMFGKFWITFAFSGVYIW
SAELYPTVIRAQGLGVMMVASRIGGSAAPWVAQYLRKYGDFVPFLVMGTL
SLVSALLCFKLKETNGKPLADTLEEFYAISKIVKESQPSRINSTKTPNLP
SDVK
Run BLAST on NCBI

transcript from alignment at sc0000109:128202..140507-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010732 ID=TCONS_00010732|Name=TCONS_00010732|organism=Clytia hemisphaerica|type=transcript|length=12306bp|location=Sequence derived from alignment at sc0000109:128202..140507- (Clytia hemisphaerica)
GGTTTAGCGTAGTTTTGGCATACTATGGAATTTCTCTTGCATCCGATAAT
CTGGGTGGAAACATGTACCGCGATTTCGCTTTGACGACCATTGTCGAATT
CCCAGCCAACATTTTATTAATGTACTTCTTGAATTTGTAAGTATCTGCTT
TGTTCATTTTCAATACAGTAGACTCTCGTTTATTCGAACTTCTATTATTC
GAATTTGTATATTTAGAATTAATTTTCATGAGTCCCCGTAAAGAAAAAAC
TTTCGTAAAATCCTTTCTATAATTCGAATCTCTCCGTTATTCGAACAAAT
TAGATTCCCCATGCAAGTTCGAATTAGCGAGTATAGTCAATTGTATTTTC
AAACGATTCTCAAACTCGGTGCGTAACAAAGTGAAACAGATTTTTGTATA
GTAAAATCGCCCCCGTTTGAAACACCTTGAAATTTCATGGCTAGTCGAAA
ACTACACTGGACTTAACCAATTAATATTTAAAATATTGATTTCATCCTCA
CTTTTGACCCCAATGTCGAGAGAAAAATCAGTTCCTCGTAGAGGACAATT
TTGGGGGAATTTATGAAAAAAGTGGGAAAACTTTGAGATCATTTTGGACA
TTCAGTCTCATTCAGGGTCACTTTTTTTGCAAATTTTGGCAAATTTAAAA
AAGAGTCTCACGTCCATTTTTTAACCTCAGTGGAACACCCGCTTCGGTCA
ACAAGAGTAGTGCCCCCCCCCATTGGGTGACGTCAATAGGTCACTGAAAC
AGGGGTGTAAAATTAATTTCCTTAGATCACGAGACTGAAATTCTACAAAA
ACACAAACGAATAAACTTGTGCAGGTTGTTACTATACTTTCAGATTCAGC
ACGGTGTGCTTTTAAAAAGCGCTTAGTTTAATAGATATGAAATGCTTGTG
TTTTTTATCATTTCACAGTTTAATAGATATGAAATGCTTGTGTTTTTTAT
CATTTCACAGAATTGGCCGGCGCAACACGATTGGTGGAAGTATAATTGTG
AGTGGAATCTCATGTCTAGCTGTTGCTTTTATACCAAAACAAGGAGGTAG
GAACATTACATTCAAAACACAGTTGTGAATACACGTTTTTTTATAAGAAC
AAACTATATAAGAACATGAGTTTTCAATGGCGAAAATGCTAAGAACAAGC
TAAGAACATTTTAAGGCTTTGCAGACCCTAAAACACCTATTTTCTTAGGA
AAATAGACAAAAAATAGACAATAAAAACGTGCATTAAACCCTTCCATTGC
ATCCCACTGGCTGATATCTCACAGGGTTAATGAGACAGGGGTGTGCATAG
CACTACTTCGTCACATATCCTTACTTCGTCTCCTATTGTTATTTTCTTTT
CTACGTCATAATTTATGCTTAAAAATTAAACAGCTGAATATACATGGTTT
CTACTAGATTATTGTTAATCATTTAAATGACGTAATACATGCTATTATGC
AAGCTAAGAAGTTGATTGACAGATATCTTTGAATGGGAAAATATGAAAAA
TTGATTGACAGATATATTTTTCTAGAATACATAAAATAATTACCGTTAGG
TGTGAAAATGATGGGCGCAGAGGTAAATAAAAGACATATTTTGACATTGT
ACATTTTCTTAACTGACCAATCAAATCACTACTATACATGTAACATTTTG
AAGAGTGAGTGCACGATGAACAATCGTGATTGAAATTCTAAAGAAATATC
TCGAAGAAACCATAATACGCATGCACGGATGCTCTACACATGGTCACATG
ACTTGAAAGTTAGATTTTGCAGATCAGTCAAAAAAATCTATCCTTACTTG
GTCACGATGCATTGCGTAAGAGTTCTTTAAAAATTTCACAAAAATTTATA
TTCTCACTACACGGTCAAGTGATTTAAAAGTTAGATTTTACAGATTAGTC
AAAAAAACTTATCCTTACTTGGTAACATGACTCGAAAGGTTGATTTTGCA
GATCAATCAAAAAAAATTATCCTTACTTGGTCACATGACTTGAAAGTTAG
ATTTCGCAGATCAGGCAAAAAAATTTATCCTTACTTGGTCACATGACTTG
AAAGTTAGATTTCGCAGATCAGGCAAAAAAATTTATCCTTACTTGGTCAC
GACAATGCATAAGAGTTCTTTAAAAATTTCGCAAAAATTTATATTCCCAC
TACACGGTCACATGACTTGAAAGTTAGATTTCGCAGATCAGTCAAAATAA
TTTATCCTTACTTTGTCACATGACTTGACAGTTAGATTTTGCAGATCAGT
CAAAAAATGTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTCGC
AGATCAGTCAAAATAATTTATCCTTACTTTGTCACATGACTTGACAGTTA
GATTTTGCAGATCAGTCAAAAAATGTTATCCTTACTTGGTCACATGACTT
GAAAGTTAGATTTCGCAGATCAGGCAAAAAGATTTATCCTTACTTGGTCA
CGATGCATTGCGTAAGAGTTCTTTAAAAATTTAGCAAAAATTTATATTCT
CACTACACGGTCACGTGATTTAAAAGTTAGATTTTGCAGATCAGTCAAAA
AATGTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTCGCAGATC
AGGCAAAAAGATTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTT
CGCAGATCAGGCAAAAAGATTTATCCTTACTTGGTCACCATTCATTGCAT
AAGAGTTCTTTAAAACTTTCACAAAAATTTATATTCCCACTACACGGTCA
CGTGATTTAAAAGTTAGATTTTGAAGGTTAGTCAAAAAAAATTTTCATTA
CATGGTCACATGACTTGAAAAGTTAGATTTTGCGGATCAGTCAAAAAGAT
TTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTTGCAGATTAGTC
AAAAAAATTTATCTTTACTTGGTCACATGACTTGACAGTTAGATTTTGCA
GATAAGTCAAAAAAATTTATCTTTACTTGGTCACATGACTTGAAAGTTAG
ATTTTGCGGATCAGTCAAAAAAATTTATCTTTACTTGGTCACATGACTTG
ACAGTTAGATTTTGCAGATAAGTCAAAAAAAATTATCTTTACTTGGTCAC
ATGACTTGAAAGTAGGATTTTGCAGATTAGTCAAAAAAATTATCCTTACT
TGGTCACATGACTTGAAAATTTAGATTTTGCAGATCAGTCAAAAAGATTT
ATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTTGCAGATCAGTCAA
AAACATTTATCCTTACTTGGTCACATGACTTTAAAATAAGATTTTTTAAA
AAATTTATCCTTACTTGGTCACATGACTTGAAAGTTAGATTTTGCAGATA
AGTCAAAAAAAATTTATCCTTACTTGGTCACATGACTTGAAAGTAAGATT
TTGCAGATTAGTCAAAAAAATTTATCTTTACTTGGTCACATTACTTGAAA
GTTAGATTATGCCGATTAGTCAAAAAAATTTATCCTTACTTGGTCACATG
ACTTGAAAGTAAGATTTTTTAAAAAATTTATCCTTACTTGGTCACATGAC
TTGAAAGTAAGATTTTTTTTAAAATTTATCTTTACTTGGTCACATGACTT
GAAAGTTAGATTTTGTAGATTAGTCAAAAAAATTTATCCTTACTTGGTCA
CATGACTTGAAAGTAAGATTTTTTTTTAAATTTATCCTTACTTGGTCACA
TGACTGGAAAGTTAGATTTCGCAGATTAGTCAAAAAAATTTATCTTTACT
TGGTCACATGACTTGAAAGTAAGATTTTGCAGATCAGACAAAAAATTTAT
CCTTAATTGGTCATGTTTACATCAAACACTACTTGGTCAAGTTTTTTCAT
TCACTAGAAATGTTAATAACTTGGACCAAAAATACCAAACACTATACTTG
GTCACGCCTTTTCACTCATAAGAAATGTTCATTATTTGGATCATAAACCA
CGCCTTTTTACTCATAATTAGAAATCTTTATATTTCGGACCAAAAACATC
AAACACTACTTCGTCATGCCTTTTTACTCATAAGAAATGTTAATAATTTT
GATCAAACAAACCAAACACTACTCCGTCGCGCGTTTTTCCTCATCAGAAA
TGTTCATAGTTTGGATCAAAAAGACCAAACACTATACTTGGTCGCGACTC
TTTACTCCTTAATCATTCAGATATTTTTCACACAAAACCCCACCAAATGT
TACTTAATTATATCTTTCATTGAAAGCTCTCGTCACTTCCATTATTCGTC
CAAAAATGTCTTCGATATTTAAAGAATTTTACGATACATTGAAAGTTCAG
GTGAAGAGGAGTTGCTAACTTGCACTTTTAGTACATTTGTGGCCGAAACG
CCCGACGAGACAGAATGGGATACATATACCTTTTTCTATTGAGATTTGTT
AAGAATATATTCAACTTTTTGTAAGCTTTAGGGTGTTCTTTCTTTTGAAT
CTTAACCCTAAAAATATTATTGAAATTTTTACGGCGATCGGTAACCGGTA
TGACCGATTTTAAGGGAACCCAACCGTGATCAGGATAGGATAGAGTGATC
TGTCGGAAACGAAAGTGTCCCAGAAATTGTGACCTGGTTGATGTATGTAT
AAAAAAACTTCTTTCTTCTACATTTTGACTCGTTATAAGGAGACTTTATC
ATTACTTTTAGAGATACTAAAGGTACTAGCTGAAAAAAAATCGATTTTTA
AAACTTCCACAGATAATGATCTGTGAAAACTAATTTATTAAAATTATTTA
AAAAATAATATCAAATTCGATTCTATTATCTTATTAGTTTTATTGTATGC
CGCCGCTTCTTTTAGAAGCCGTATGCAGTATGTTCTTTATAAAGTTTTTG
ATAAAAAAAGGGTTCAGACATTGAACCTTTAATTTTTGCTAGACGGAACG
AGAAAGCGATCATTCATTCACTTTATTAAGTTTGTTTGTTAACACCTTTA
AAAAAAAGAGAGATCAACCATAGACTATTTCTTGTTTCATTTGTTTATTA
ACACCTTCACATGAAAGAACAATTTTTTTGTTTAATTTTAACAGTTATAA
AGGTGTTACAGAACAATACAATAAAAAAAAGCAAGTAGAAACCACCTCTA
ATCTCAAGATCAATCAGAAATAATTTATGCAATTATTCATGCATATATTA
TGACGTAAAAGAGAAAATAACAATAGGAGACGAAGTAAGGATATGTGACG
AAGTAGTGCTATGCACACAGGGGTGGCAAACGTTTTTGTATAAGACTCCA
TACAAAGAGCTTCGTGGACTATCATAATCTGTTGTGGTATAGGGTTGTTT
TCTGAGAATTGGAAACCATTTAGATATAATTACCAATATTGGAAAATCGC
AACAACAGATAAAGAAATTGAATTGGAAAACTTTGAATGAAATGAAATCC
CCAGCCACAAAAAATATGGGAGTGTCAATCGCCATTGAGTTTCAGTCCGT
TATTTTTATCCCCACTGGCTGAAAAATTCCACCGGGCCTGTGAAAAGGGG
GTGTCATATAAAATATATATATATATATACAAATAAAAAGAAACACCATA
ACTCCAAATTTGAGTCAAAGTTCTTCTTATAGAATCAAAAACTAAAACAA
AGGGTGTGGTGGTAATCCTACACAACTAAGAGAGGTCCACCACACCCAAG
AAGAACAACAACACTGAAATTCTGATGTGGTGGTGGTTTTGATTTGTCTC
GGGACGAGGAACTGACCGGTCACGCCCTTAAACATACGGTTGAACATCTC
ATCACCCTTCTCATGAAACAGACATTCTACAAATGGAATATTGGAACCAT
CAATGTGAGAACTTGCAAAGACGACCTCAAACTCGAACGTGTTGTGCAAG
AGATCCATAAAGCCAACTTAGAAATCTCTGCACTTCAAGAAGTAAGAAGA
CTCAAACAAGGATCAGCTACAGTTAAATGTGATAATTCGAAATACGAAAT
CTATTGGTCAGGTCACTCCCTTAAGAGACAACATGGAGTTGGTTTTGTCA
TCAAAGTAGACCCTAATGTCGAAATCGTGCAAGTTGAATACGTGGATGCT
CGGATCATTGTGCTTCAAACCAAGGTATACGGATGTCTGCTTAAAGTTAT
TAATTGCTATGCACCTACAGAAGAGAGTAGTGACAGTTCAAAAGACTTGT
TTTACAGAAATCTTCACAAACAATTCGTCAATGTTCCAACAAAATACAAG
GTCATTTGTCTTGGAGATTTTAACGCGACAACTTCAGCAGCATGGTACAA
TTCTTCGCTCAGAGAAAACATAATTATTGATAGCCTGATTGTTAATAATA
ACGGTGGAAGATTCCACGATTTAATACAAACTCAACAATTATCAGTCTTG
AACACATGGTTTAACCACAAACGTTGTCGGCGAATTACATGGCATTCCGC
GGACGGTCACACAAAAAAGGTTTATGACTTCATCCTTTGCTGTTCCTGGA
TACGCCAGTTTTGCACAAACTGCAGGGTTTATAATTCTTTTGACTTTGAT
AGCGATCATCGGCTGGTTATTGCCAACATTAAAAGTCCAGGAAATAAGCT
GTCTCGTGCTAAAAGAAGGAAACCTAAAACAAAACACAAAAAACTCAACT
ATGATTTAGGAAAAGATCGAGGCAACTTAGAAAGGAACACTTCAAACCGA
AGCATTAAAACTGAATACTCTCGCTGCAACGAGAGAACTTGATAAACTGT
TTGCTACTGCGAAACGACAGACTACCTTGCACACTTCGACAGCTTCTATG
TGTCCCCCTGACAAAATTTTAAAACACTTTAAACAGCATTTTAACCCGGA
AAAGGAAAACACTGTCAGACCAGACGAATTGGACAATCTACCTAGTTTTG
TAGAGTCGCTTCGTAAGATTTCTTCAACAATCAATATCAATATTGAACCT
CCTACCATCGATGAGATCACAAAGCATTTACAAAAACTCAAAAACAAGAA
AGCAAACAATGATATTGACTCTGAGCTTCTAAAGAAATGTGAGTGCCCAG
CTCTTCTTGACGCTATTCGCAAAATGAGACTAAATGTATGGGAAAATCTC
GACATTCCCTCTGCATGGGGAAACTCTAGATTGAAAACTTTATGGAAAGG
CAAAGGTTCTAAGAAGGATCCTACTAAGTAGAGAGGCTTGAGTATCGGCT
CACAGTAAGCAAACTAATTGTGAACATTATCCTAAGCAGACTCCAACCTT
GGTACGAGGCACAACTGACCGATGAGCAAAACGGATTTCGACAGAATCGA
GGAACGACAGATGGGATCTACAATATCAAGCGTATTCAACAGATCTCTAA
CCGTAAAATGCAACCCCTTTATCTGGTATTCGTGGACCTATCAACTGCGT
TCGACCACATCCCACGAAAATGGATGTTCGACTCAATCAGACTTCGATTT
AAGGATACCCAAAATCCTATCTTAATTGACATTCTTGAAAAACTTTACGA
AAAAANATAAAACAGAAATTGCACCAACCTTGGCAAAATGACGAAAAGCT
CAAAGAGCTATACACGAAAAAAGATGAACTTGTTAAGAGAAATGCTGATC
AGAAACCTTTGCAACAATTACGCAAAAAGATCAGGAAAAGATCGAGGCAA
CTTAGAAACGAACACTTCAAAACAGAAGCATTAAAACTGAATACTCTCGC
TGCAATGAGAGAACTTGATAAACTGTTTGCTACTGCGAAACGACAGACGA
CTACCTTGAACACTTCGACAGCTTCTATGTGCCCCCCTGACAAAATTTTA
AAACACTTTAAACAGCATTTTAACCCGGAAAAGGAAAACACTGTCAGACC
GGACGAATTGGACAATCTACCTAGTTTTGTAGAGTCGCTTCTTAAGATTT
CTTCAACAATCGATATCAATATTGAACCTCCTACCATCGATGAGATCACA
AAGCACTTACAAAAACTCAAAAACAAGAAAGCAAACAATGATATTGACTC
TGAGCTTCTAAAGAAATATGAGTGCCCAGCTCTTCTTGACGCTATTTGCA
AAATGACACTAAATGTATGGGAAAATCTCGACATTCCCTCTGCATGGGGA
AACTCTAGATTGAAAACTTTATGGAAAGGCAAAGGTTCTAAGAAGGATCC
TACTAAGTACAGAGGCTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGTCGTCCAATGAAAACGCTCTTGGAGCAAGTCATATCAGATAG
AAATTTAACTATTGATCAGTTTTGTAAAAAATCTATTTCAGAGAATGTGT
GAGATTGCTATAGGGCTTCCAATAATACAGACAAGCAAGTTGTCAAGTAT
TCTTTGAAGCTCTGTGGCCAATCCAATCCTTGTAGGGTTTAGATTGTAAA
CTTTTATTATTATTATTATATACAACTATAGACGCTGTGGAAAATGCGAA
AGGTTGTTTCAAATTTGTTTCACTTTTAGTTTACAATTGGATCCGTGTAG
CGATGGGAATGTTTGGCAAATTCTGGATCACTTTCGCTTTCAGTGGTGTG
TACATTTGGTCCGCAGAACTCTATCCAACGGTCATCAGGTATGTTACTTG
TGAGTGTCTAGTACAAAACGTCGAAACAACCATTCAACGTCCATAACGTC
CATATAACGTTATACGAACGTTGAAACAACGTTGTGTGCCAGCTGGGGAG
TCTTGAAAGCAACTTTCTTTAATTGTATTTGCACTTTATGGTCACAAAAT
TCTATCTGAACAAGTTTCGTAGGCTTCTGCTATAAAAAACTTTATGTAGG
AAGTATATACCCTGAGTATCAGAGGNTCTTGAAAGAAACTTTCTTTAATT
GTATTTGCACTTTATGGTCACAAAATTCTATCTGAACAAGTTTCGTAGGC
TTCTGCTATAAAAAATTTTATGTAGGAAGTATATACCCTGAGTATCAGAG
GTTGAGAATATTTCAACCTCTGACGACCAATAATAGAAACTTTATCGCGC
ATGTGTCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATAT
TACTATATTAATGTTTAGCAGACTGTATCAGTATGCAGTTTACTATTCAC
GAATTCCCCGGAAACCTCCAAGTGTAATTGAAATGAGTTTCTTCAAAAGA
AATCTTTTACATGATCCCCAAATGTATAACAGTAATTACTAAACTTTTAA
TTATTGAAATGTCACTTTAATTGAATCGAAATAATAGACAAACTTTATGT
TATGATTCTCTACACTGACTCTTTTTACAAAGCATTGATGACATTCATGA
GTTGTGTTTTCAACGACGGGAATAAAAATATCAACTTTGAACTTCATCCA
AGATCTTGGATGGTCGTCATGGTTACTTTTCTCAGCGCTGATTGCGCGCT
GAATAGAATCTGGATTGGTCGGCACAGCGTCGATATATGATTTCGACCTG
TGCTTTTCACGGTAGGGATTGTATCTATAGAGGTCTGCGATTCAGACTAT
AAGTTTTGCGAGTTCAAACCGGGGATAAACATGAAAAAACGAGCTTCACT
GAAATACGTAAACTGCTGGTTAAAATATATAGATCTTTCTCTTGTACTTG
TACTTGTTGGTTTAGCTAAATCATCTGTTTGACAACTGTTGGTGGTTCGT
CCAGTAGCGTAGACAAGAGGGGCGCCTGCTGTTGTCGGTTCGTCCAGTAG
CGTAGACAAGAGGGGCACAAAATTTGTGTAGAAGAGCAGGTTTTTTTGAC
ACGGTAATTATCTTTTTACATCATGTCCCTTGTGTTTCAGTGCCTCTTTG
TAGAAATTGTTTTTCGTCAACGCAGTAAATTTCGTCACTTTGTCTTCTAG
TGTCTAATCTCATCTTATTTTTCCACTTTCCTAAGTTTTGTAATTTTTGA
TCAATCGTGCATACCAATCCGCATACTCTCGGGTACCTAATAGCCGGGGG
GGGGGTGGAATAAGCAGGGGGGTTGGAAAAAATCTCAAAAGCGCGGGGGG
GGTTGGAATAAAAATGTCCTGGGTGGAAAATTTTTGAAAAGGAGGCTAAT
ACAGCAGAATTAAGACAAAAAAGGGAAGTTTCAAAAAAATTTTCCCAAAA
ATTAATAAGCGGGGGGGGGGGGGGGGGGGAAAAAAAAAATCGAAGGGGGG
GGGGGGGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATT
AATTAGCGGGCGGGGGGGCGGCTATTAGGTACACTTGACATGGTTTAAGA
GGAATAAAAGATTTAAAGAAAATCGAACAAAACTTCCAAATATCATATCT
CAGTATTCTGATTCCGAGCATTATTTACTTTTCCTTATTCCTTCCAATGA
GTCCTTCTTCCTGTATCTGTTCGAGTTGTTAGTTATTTATATATTTTATA
CACACAGCACATTATATAACACTTTTCTTGTAAGAAGAACCAATATTTTT
AGAGATCAAGGAAATAGTGCTAAAAAACAGAAAGGTTATTATAATATTGT
GCGCTAATGGCAATGTAGTGATTCAAAGACGGAAATTGTTTTCATCCATA
GAGCACAAGGACTTGGAGTAATGATGGTTGCCAGCCGCATCGGTGGTTCA
GCGGCGCCTTGGGTGGCGCAATATTTGAGAAAATATGGAGACTTTGTACC
GTTTTTAGTAATGGGAACACTTTCATTGGTCAGTGCTTTGTTATGCTTCA
AATTGAAAGAAACAAATGGAAAACCATTGGCTGATACTTTGGAAGAATTT
TACGCAGTTAGTGAGTACGGCAATCTATCTTTTTATGTATCTTCTCAATC
ATTTTGTCTTCCGACTGAGCTACTATTACACGTTGTTTTATAAGAACAAA
CTATATAAGAACATAAGGCTTCGATCGTCAAAATCTTAAGAACAAGTTAA
GAACATTTTAAGGCTTTGAGGACTCTAAAATACCTAATTTCTTAGGAAAA
TGGACAAGAATACTCACAAAATGATGAAAAACTCAAAAAGTTAAGAACAT
CCGAAGGCTTCAAAAATTTTGGATGTTCTTATAAAAAAAGTGTACTTTTC
ACATGAATAATTATTTTCAGGGGGTACTAAATTATACTTGCTGATTGACG
GGGGTTGTACCACCTAGGTTCAAATTTGGACCCTTTCTGGAATTTAATTT
AATTCTTTTGGATCTTGGCTGTACACTACCAGAGACTGGTTTTACAATTT
TGTGTTTTCAACCATACCTTGGGCAACCTCGTTCCCTGCGTATTATCAGC
TTTTGATGCTTACTGATAGCGCTAGATAATACGTCTCTGGCGTCAAATCA
GTAGCGTAAATAAAACCTGGGATACACGGGGACGAGGCTGACCTTGGGAA
GCTAAGAAAGTGACGCTTGATCCAGCGGAGCACCCGATTCCACACTTGCT
CTTTCTCAATTTTAAAATCTTTCACCAGATATCAAAGATTGTAAAGGAAA
GTCAGCCATCGAGAATCAACTCAACAAAAACGCCGAATCTGCCATCTGAT
GTGAAATGATAGACTGGATAGACACCCTTCACAATTTGGAGGTCCTAATA
GTTTGTTATCATTATACAATTGTAAAAAGTCGTTGTAAAAAGAATTTGAT
CTGAATGAATGATAAATAAACCGTTATCAAGACGTAAAAATACAGTTAAA
TTGCAG

Coding sequence (CDS) from alignment at sc0000109:128202..140507-

>TCONS_00010732 ID=TCONS_00010732|Name=TCONS_00010732|organism=Clytia hemisphaerica|type=CDS|length=3075bp|location=Sequence derived from alignment at sc0000109:128202..140507- (Clytia hemisphaerica)
ATATCAAAGATTGTAAAGGAAAGTCAGCCATCGAGAATCAACTCAACAAA
AACGCCGAATCTGCCATCTGATGTGAAATGAAGCACAAGGACTTGGAGTA
ATGATGGTTGCCAGCCGCATCGGTGGTTCAGCGGCGCCTTGGGTGGCGCA
ATATTTGAGAAAATATGGAGACTTTGTACCGTTTTTAGTAATGGGAACAC
TTTCATTGGTCAGTGCTTTGTTATGCTTCAAATTGAAAGAAACAAATGGA
AAACCATTGGCTGATACTTTGGAAGAATTTTACGCATTTACAATTGGATC
CGTGTAGCGATGGGAATGTTTGGCAAATTCTGGATCACTTTCGCTTTCAG
TGGTGTGTACATTTGGTCCGCAGAACTCTATCCAACGGTCATCAGAATTG
GCCGGCGCAACACGATTGGTGGAAGTATAATTGTGAGTGGAATCTCATGT
CTAGCTGTTGCTTTTATACCAAAACAAGGAGTTTAGCGTAGTTTTGGCAT
ACTATGGAATTTCTCTTGCATCCGATAATCTGGGTGGAAACATGTACCGC
GATTTCGCTTTGACGACCATTGTCGAATTCCCAGCCAACATTTTATTAAT
GTACTTCTTGAATTTATATCAAAGATTGTAAAGGAAAGTCAGCCATCGAG
AATCAACTCAACAAAAACGCCGAATCTGCCATCTGATGTGAAATGAAGCA
CAAGGACTTGGAGTAATGATGGTTGCCAGCCGCATCGGTGGTTCAGCGGC
GCCTTGGGTGGCGCAATATTTGAGAAAATATGGAGACTTTGTACCGTTTT
TAGTAATGGGAACACTTTCATTGGTCAGTGCTTTGTTATGCTTCAAATTG
AAAGAAACAAATGGAAAACCATTGGCTGATACTTTGGAAGAATTTTACGC
ATTTACAATTGGATCCGTGTAGCGATGGGAATGTTTGGCAAATTCTGGAT
CACTTTCGCTTTCAGTGGTGTGTACATTTGGTCCGCAGAACTCTATCCAA
CGGTCATCAGAATTGGCCGGCGCAACACGATTGGTGGAAGTATAATTGTG
AGTGGAATCTCATGTCTAGCTGTTGCTTTTATACCAAAACAAGGAGTTTA
GCGTAGTTTTGGCATACTATGGAATTTCTCTTGCATCCGATAATCTGGGT
GGAAACATGTACCGCGATTTCGCTTTGACGACCATTGTCGAATTCCCAGC
CAACATTTTATTAATGTACTTCTTGAATTTATATCAAAGATTGTAAAGGA
AAGTCAGCCATCGAGAATCAACTCAACAAAAACGCCGAATCTGCCATCTG
ATGTGAAATGAAGCACAAGGACTTGGAGTAATGATGGTTGCCAGCCGCAT
CGGTGGTTCAGCGGCGCCTTGGGTGGCGCAATATTTGAGAAAATATGGAG
ACTTTGTACCGTTTTTAGTAATGGGAACACTTTCATTGGTCAGTGCTTTG
TTATGCTTCAAATTGAAAGAAACAAATGGAAAACCATTGGCTGATACTTT
GGAAGAATTTTACGCATTTACAATTGGATCCGTGTAGCGATGGGAATGTT
TGGCAAATTCTGGATCACTTTCGCTTTCAGTGGTGTGTACATTTGGTCCG
CAGAACTCTATCCAACGGTCATCAGAATTGGCCGGCGCAACACGATTGGT
GGAAGTATAATTGTGAGTGGAATCTCATGTCTAGCTGTTGCTTTTATACC
AAAACAAGGAGTTTAGCGTAGTTTTGGCATACTATGGAATTTCTCTTGCA
TCCGATAATCTGGGTGGAAACATGTACCGCGATTTCGCTTTGACGACCAT
TGTCGAATTCCCAGCCAACATTTTATTAATGTACTTCTTGAATTTATATC
AAAGATTGTAAAGGAAAGTCAGCCATCGAGAATCAACTCAACAAAAACGC
CGAATCTGCCATCTGATGTGAAATGAAGCACAAGGACTTGGAGTAATGAT
GGTTGCCAGCCGCATCGGTGGTTCAGCGGCGCCTTGGGTGGCGCAATATT
TGAGAAAATATGGAGACTTTGTACCGTTTTTAGTAATGGGAACACTTTCA
TTGGTCAGTGCTTTGTTATGCTTCAAATTGAAAGAAACAAATGGAAAACC
ATTGGCTGATACTTTGGAAGAATTTTACGCATTTACAATTGGATCCGTGT
AGCGATGGGAATGTTTGGCAAATTCTGGATCACTTTCGCTTTCAGTGGTG
TGTACATTTGGTCCGCAGAACTCTATCCAACGGTCATCAGAATTGGCCGG
CGCAACACGATTGGTGGAAGTATAATTGTGAGTGGAATCTCATGTCTAGC
TGTTGCTTTTATACCAAAACAAGGAGTTTAGCGTAGTTTTGGCATACTAT
GGAATTTCTCTTGCATCCGATAATCTGGGTGGAAACATGTACCGCGATTT
CGCTTTGACGACCATTGTCGAATTCCCAGCCAACATTTTATTAATGTACT
TCTTGAATTTATATCAAAGATTGTAAAGGAAAGTCAGCCATCGAGAATCA
ACTCAACAAAAACGCCGAATCTGCCATCTGATGTGAAATGAAGCACAAGG
ACTTGGAGTAATGATGGTTGCCAGCCGCATCGGTGGTTCAGCGGCGCCTT
GGGTGGCGCAATATTTGAGAAAATATGGAGACTTTGTACCGTTTTTAGTA
ATGGGAACACTTTCATTGGTCAGTGCTTTGTTATGCTTCAAATTGAAAGA
AACAAATGGAAAACCATTGGCTGATACTTTGGAAGAATTTTACGCATTTA
CAATTGGATCCGTGTAGCGATGGGAATGTTTGGCAAATTCTGGATCACTT
TCGCTTTCAGTGGTGTGTACATTTGGTCCGCAGAACTCTATCCAACGGTC
ATCAGAATTGGCCGGCGCAACACGATTGGTGGAAGTATAATTGTGAGTGG
AATCTCATGTCTAGCTGTTGCTTTTATACCAAAACAAGGAGTTTAGCGTA
GTTTTGGCATACTATGGAATTTCTCTTGCATCCGATAATCTGGGTGGAAA
CATGTACCGCGATTTCGCTTTGACGACCATTGTCGAATTCCCAGCCAACA
TTTTATTAATGTACTTCTTGAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006014XLOC_006014Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010732-exon-sc0000109-1575043694:140372..140507TCONS_00010732-exon-sc0000109-1575043694:140372..140507Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1575043694:139462..139547TCONS_00010732-exon-sc0000109-1575043694:139462..139547Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1575043694:131270..131378TCONS_00010732-exon-sc0000109-1575043694:131270..131378Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1575043694:129102..129306TCONS_00010732-exon-sc0000109-1575043694:129102..129306Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1575043694:128202..128429TCONS_00010732-exon-sc0000109-1575043694:128202..128429Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1510915933:140372..140507TCONS_00010732-exon-sc0000109-1510915933:140372..140507Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1510915933:139462..139547TCONS_00010732-exon-sc0000109-1510915933:139462..139547Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1510915933:131270..131378TCONS_00010732-exon-sc0000109-1510915933:131270..131378Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1510915933:129102..129306TCONS_00010732-exon-sc0000109-1510915933:129102..129306Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1510915933:128202..128429TCONS_00010732-exon-sc0000109-1510915933:128202..128429Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1491911889:140372..140507TCONS_00010732-exon-sc0000109-1491911889:140372..140507Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1491911889:139462..139547TCONS_00010732-exon-sc0000109-1491911889:139462..139547Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1491911889:131270..131378TCONS_00010732-exon-sc0000109-1491911889:131270..131378Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1491911889:129102..129306TCONS_00010732-exon-sc0000109-1491911889:129102..129306Clytia hemisphaericaexon
TCONS_00010732-exon-sc0000109-1491911889:128202..128429TCONS_00010732-exon-sc0000109-1491911889:128202..128429Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010732-proteinTCONS_00010732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:128202..140507 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.055	12.9255	9.92671	4.20705	0	0	0.82184	0	0	0	0.129526	0.127719	0.425137	0.750566	0	0	0.287924	0	0	0	0	1.37096	2.16003	3.70111	0	0	0	1.00118	1.59758	0.682622
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
[Close]
BLAST of TCONS_00010732 vs. Swiss-Prot (Human)
Match: S22A5 (Solute carrier family 22 member 5 OS=Homo sapiens GN=SLC22A5 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.924e-30
Identity = 66/194 (34.02%), Postives = 114/194 (58.76%), Query Frame = 3 
Query:    6 SVVLAYYGISLASDNLGGNMYRDFALTTIVEFPANILLMYFLNLIGRRNTXXXXXXXXXXXCLAVAFIPKQGVYNWIRVAMGMFGKFWITFAFSGVYIWSAELYPTVIRAQGLGVMMVASRIGGSAAPWVAQYLRKYGDFVPFLVMGTLSLVSALLCFKLKETNGKPLADTLEEFYAISKIVKESQPSRINSTK 587
            ++ + Y+G+SL + NL G+++ +  L+ +VE PA +L    L  + RR ++  ++ + G   L +  +P    Y  +   + M GKF +T AFS VY+++AELYPTV+R  G+GV   ASR+G   +P+   YL  Y  F+P+++MG+L++++A+L   L E+ G PL DT+++   +  +     PS     K
Sbjct:  353 TISVGYFGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQYLPRRYSMATALFLGGSVLLFMQLVPPDLYY--LATVLVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV-YLGAYDRFLPYILMGSLTILTAILTLFLPESFGTPLPDTIDQMLRVKGMKHRKTPSHTRMLK 543
The following BLAST results are available for this feature:
BLAST of TCONS_00010732 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22A55.924e-3034.02Solute carrier family 22 member 5 OS=Homo sapiens ... [more]
back to top