TCONS_00010732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010732-protein
Unique NameTCONS_00010732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010732-protein ID=TCONS_00010732-protein|Name=TCONS_00010732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
FSVVLAYYGISLASDNLGGNMYRDFALTTIVEFPANILLMYFLNLIGRRN
TIGGSIIVSGISCLAVAFIPKQGVYNWIRVAMGMFGKFWITFAFSGVYIW
SAELYPTVIRAQGLGVMMVASRIGGSAAPWVAQYLRKYGDFVPFLVMGTL
SLVSALLCFKLKETNGKPLADTLEEFYAISKIVKESQPSRINSTKTPNLP
SDVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006014XLOC_006014Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010732TCONS_00010732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..189
e-value: 3.9E-23
score: 81.3
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 26..168
e-value: 5.7E-13
score: 48.4
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..166
score: 12.079
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 25..162
e-value: 3.16408E-9
score: 53.0865
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 25..169

Blast
[Close]
BLAST of TCONS_00010732-protein vs. Swiss-Prot (Human)
Match: S22A5 (Solute carrier family 22 member 5 OS=Homo sapiens GN=SLC22A5 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 9.621e-33
Identity = 66/194 (34.02%), Postives = 114/194 (58.76%), Query Frame = 0 
Query:    2 SVVLAYYGISLASDNLGGNMYRDFALTTIVEFPANILLMYFLNLIGRRNTIGGSIIVSGISCLAVAFIPKQGVYNWIRVAMGMFGKFWITFAFSGVYIWSAELYPTVIRAQGLGVMMVASRIGGSAAPWVAQYLRKYGDFVPFLVMGTLSLVSALLCFKLKETNGKPLADTLEEFYAISKIVKESQPSRINSTK 195
            ++ + Y+G+SL + NL G+++ +  L+ +VE PA +L    L  + RR ++  ++ + G   L +  +P    Y  +   + M GKF +T AFS VY+++AELYPTV+R  G+GV   ASR+G   +P+   YL  Y  F+P+++MG+L++++A+L   L E+ G PL DT+++   +  +     PS     K
Sbjct:  353 TISVGYFGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQYLPRRYSMATALFLGGSVLLFMQLVPPDLYY--LATVLVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV-YLGAYDRFLPYILMGSLTILTAILTLFLPESFGTPLPDTIDQMLRVKGMKHRKTPSHTRMLK 543
The following BLAST results are available for this feature:
BLAST of TCONS_00010732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22A59.621e-3334.02Solute carrier family 22 member 5 OS=Homo sapiens ... [more]
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