TCONS_00010722 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010722
Unique NameTCONS_00010722
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1348

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010722 ID=TCONS_00010722|Name=TCONS_00010722|organism=Clytia hemisphaerica|type=transcript|length=1348bp
CAACTTTACCGCCGAAGCTGCTACAGACACTCCTAAAGATGCAGACCTTA
GAGCTGCATTTACAGCGCTCAAAGGGTTAGGATATTTCAACACAGATATG
GTTTATACTGCAGCCACCTTTACAAACACTGGCAAGAAACGGTCCAGTGT
TAGTGGTGAACCAGACAACTCTGCAGCAACAAAGAAAATGTGTTTCGAGA
AAAACTCAAAGTCGTTCAAAAGCCGACTTAACGAACTAGCGCAACAGAAC
AAGTTGCAGCAACCAACGTATGAGACGATTAGCACGACAAATGGATTTTT
CACAACAGTCACTTTCAACGGGCGGCAATTCAAGAGTGCATCGTGTATGA
GTAAGAAGAAGGATTCCGAACAGAACGCATCAGAAGTCGCTTTGACTTTC
TTGACCAGCGGCCAACAAGCAAATGGAGAACAAAATGGAAAGACAGCTGA
TGaTGTTGCAGATATGATCAAAAGTGCTCGCGTAGGTTCAAACGTCATGA
ATTTATCCTTGAAAAATCGTTTACAAGAGTATTGCCAACGTTTGAAGAAA
GAACTACCCACCTATAAATCTGAATTGGGAGATAATGGTTTCTTTATGAC
CGTCTGTACCGTTGATGAGATCGCCTACGAAGGTGGACCGGCCAAAACGC
GAAAAGAAGCAGAGAAAAATGCAGCGGAGGCAGCTCTTAAAGAACTCGGG
TTAATGGCTGTTCGAGAACAATAAATAGAGAATGGGTGACTACATTTCAG
GGATAGGATATGGAGAATTTTTAAACGGTGAACGGGTCGAAGCGGAGCAC
GACCGGCAgtgtgttttcaaaaatatactttatATCAGAAACTATGACAG
CGTTATCGGACATGACTTTCAGTTATACATACAATTACTTTGATGATGTG
TATTTGATAAAGTGTACAGTTTACTGATTTGAACAATATCCGCCAGATTT
CATTTTCCATGATGGTTTTTATTTGATGTATCTGATAtacggggaaaatt
ttcgtcggggaaaagtgacgaaattttggccaagtgacgaatatttttcc
ccgacgaaagtTTTCGCTGGCCTTAATGCgcttaccaactaccagcaagt
gacgaatatttttcctcgacgtaaattttccccgacgaaaattttccccg
acgaaattttccccgataaggtatgtgcTGAAATATGATAAATGTAAATG
TTATTCATAATGTATAAAGTTCACGATTCTTTATGACAAAACATTTTATT
TCGATGCgattttattttccattttatgagtagagtattattttttttaa
aggttttaaatagAACATGACATGATTATAAtcaaaagtctaaaaata
Run BLAST on NCBI

protein sequence of Putative dsRNA binding protein

>TCONS_00010722-protein ID=TCONS_00010722-protein|Name=Putative dsRNA binding protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
NFTAEAATDTPKDADLRAAFTALKGLGYFNTDMVYTAATFTNTGKKRSSV
SGEPDNSAATKKMCFEKNSKSFKSRLNELAQQNKLQQPTYETISTTNGFF
TTVTFNGRQFKSASCMSKKKDSEQNASEVALTFLTSGQQANGEQNGKTAD
DVADMIKSARVGSNVMNLSLKNRLQEYCQRLKKELPTYKSELGDNGFFMT
VCTVDEIAYEGGPAKTRKEAEKNAAEAALKELGLMAVREQ
Run BLAST on NCBI

transcript from alignment at sc0000109:518248..525301+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010722 ID=TCONS_00010722|Name=TCONS_00010722|organism=Clytia hemisphaerica|type=transcript|length=7054bp|location=Sequence derived from alignment at sc0000109:518248..525301+ (Clytia hemisphaerica)
CAACTTTACCGCCGAAGCTGCTACAGACACTCCTAAAGATGCAGACCTTA GAGCTGCATTTACAGCGCTCAAAGGGTTAGGATATTTCAACACAGATATG GTTTATACTGCAGCCACCTTTACAAACACTGGTAAGAAGAAAATATCAAA GTCTAAGTATATTTGACTTAACATAACATCTAGTGTGGCTCCGCATCAAT AACGGGGTTGTATTTTCCGAAAATGATTGCGATGGTGTCGTCATTGGAAA AAAGATATGTGTGAATATAAAGAAATCTATAAGAACttgaaaatgatgaa gaaaaCTGAATTTCAActtaaagtaaaaagtaaagtaAAATTATGAAAGA GCACCCCACTCAAGAAACTTAAAAGAGATTAATAAAGTTAAATCAAATTA AAGTTCCTTGCCCCAATCTAATACTATTAAAGATGAAAATATTCATGTTT GCAGGCAAGAAACGGTCCAGTGTTAGTGGTGAACCAGACAACTCTGCAGC AACAAAGAAAATGTGTTTCGAGAAAAACTCAAAGTCGTTCAAAAGCCGAC TTAACGAACTAGCGCAACAGAACAAGTTGCAGCAACCAACGTATGAGACG ATTAGCACGACAAATGGATTTTTCACAACAGTCACTTTCAACGGGCGGCA ATTCAAGGTAAAAACCGTTTTGAAACTACTGCTAGTATTTATCCAAACTA TTAAGGTTGAGGCCTTGGAGCTAGAAATTCTATCTAtgaggcttttccag aaaaaatctgaatatgagcagggtggaggatataactttttttggaaatg tatggacattgtgacttttgaccccccccccNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNcccggaccttattaggacccccc cccgtttattaatttttgaaaaaaattcccagctaccaaaaagaaagttc cttgttttactctaaaaaacctaaatttagtctattttgaccctttttag ggtttttaaggTCCactttccaaccccccccgtttatttggcacctaaga gtacaaaccttaaggcttcactttttcttacttgggaaaggttgaagatt caaaTCTTGCTCTTCGAGCTTCAACCTCAATGATCCAAATCATCACGCTA GACTGCAGGTGCTCAGTATCCCAATGAGTCAAATAAGGGAGTATTTGATT TACAAAAAGAAGAGAGTCGAATAGCCtagggtccacttaaagctattttt ataTCGTTCGTGACTTTGTTGACTCCCATTCGACTCGATCGGCATTTACA GACTGGATGGCACGATAAAGTGACCCGGTATTAtgtggtaatatgctttt gcttaggcggactgtaaaacagatttttagttgttttggaaggtaaaaac agtatgaagcaatgtttttatttggaaataagggattgcaaatcctggca aatctgttattgatgtttgtttctcattttcgATTATACCTTTCAATTAC AAGAAGGTTTAtagttatttggatttttaacattttctctcaaaatggcg acctcgacAAACGCTCCTAGTGTAGACTTCACTGGaattcactggactca gcgtcataaaaaattatcaaaaagcaaagttcagccaaaagtagactcta gtcaaCCTCCACTGTTACATTGTTAGTTCTCAAAGAAGTCTTTTGGGAGG AAGTAAAGATGGCAATTATAAACTAATGTGTTGTAGATTGTCAAGTGATT ATTGTCAGGCGATCACATGCaaacacaggttgcaaaataaaagtctgaag acaaatcacgcttttactcgaaattctTATgggcttgttacatgacattt atttctgattggttcgaatgtATTGACACTAATAGAGTTATTGACTGTAA GTTGTAAaacaagtaacatgggaataaaatagcgaactttttcgagtaat cacatattTTGACTGCATTGGTATAATTTTACAACCCGTGTATTCATATC TTCAAAACCCTTAAACTACGaaatcataaaaattctctCGTATGTTTTTT CAGAGTGCATCGTGTATGAGTAAGAAGAAGGATTCCGAACAGAACGCATC AGAAGTCGCTTTGACTTTCTTGACCAGCGGCCAACAAGCAAATGGAGAAC AAAATGGAAAGACAGCTGATGGTAAGAATGATCGATAGTTGATTGTATTG ATGAATCGATTGAAATTCTAATGGTTTATAAAATTCTTTGAGATATTTCG ATTGATAGTCAGCTGTAGTAAAGGCCGCTATGTCTTCCCGTGTACAggag cttgtgcaaagggattttatgattaattcaccaatgacgtcagtttccat tgCAACGGGTGGTCACACCCGGTCACACCCGGCCTcgcctctcaaatttt gatcttctacattcaaggaacaatattcaatcataaaatctctttgcaca agctgctgcacacgggaagctttttcgcgacatagtgctggggtgaaaca aggcatgtcccaaatatattttgcgtgacgcacaccgcttcccattattc attacctttcatatatagctcaaaagaatcgtatcaacgagaggatttcg aaaagtgctgggtcaaaaatttacatcaaggcaatctcaagatatcggcc aaaaactgattttgacgttataaaatacatcgaaaaaacacgtcaaaaag actatttaaatgacgtcattattgaagaaaggcgataattccgattaact tactacaatcaaagcaaaattttgactggatTTAAATTaacgattttaaa atatttcatgaaaaaaaaatttgaaaattcatgatgacgtcagcattttt tgacgtattttaatttttccggacaacaaatgacgtcattcaaattttct gaaattttttgaacaaatatttcagaatcattaatttacaactccagtca aaatttggtgttgattgcattaataaaatagatcttatcggagtttttga tttttctaaaaaagcgatgcattgcgggattgtttcgggagtattacaat agaaatctcttaggaattcctcgagggaattctattgtaatacccccgaa acaatcccacaatgcattgctgttttagaaaaataaaaaaatccgataag gtctattgaagttatcgctgtttttcaataatgacgttatttgaatctta cttatgacgtgtttttcgatgtattttataacgtcaaaatcaatttttga ccgatatcttgagattggcttaatgcaaatttttgacccagcgcTTTTCG AAATCCGCTCGttgatatgattcttttgagctatataattatgaacgtta aggaataattggaagcggtgcgcgtcacgcaaaatatatttgggacatgc cttgtttcacccgagtgGCCCCTACTACTGATGCAGTACCTTaatacacg aatattactaggctgcaagtattcaacggccttgaaatttgcatgatctg aaattaacacgaatttttctgctttttcaaagaaacagcggccggtttta attaagggggtttttattaacatgaAATTTTTCACTTCGTGTttataaaa tgactagtaatattcgtgtaataaggtattctTAAATAGACACCTTGGTA TCATCGGGTGCAAATGCAAGTTTTTTTTACTGTTAACTAGTCGTTCAGAT ACATCAAAATATACTAGTACCTACCCACCGATACCGAAAGGTACCTGACA cgattttgccaaatttgaatGACGATAAATGTCTATTTCTTTGATCGCAT TATCGCATGTCACGACTAAAAACCATCTGACAGTATTTGATTCAGATGAA CTTGTATCGGACAGGTTGATAGGTTGTTTTAACGTTACACTTTTTATTTC ACGAGGCATTCTTAATCAGTACTTATAGAAATATTGAACacatttttgtc aattctagaTGTTGCAGATATGATCAAAAGTGCTCGCGTAGGTTCAAACG TCATGAATTTATCCTTGAAAAATCGTTTACAAGAGTATTGCCAACGTTTG AAGAAAGAACTACCCACCTATAAATCTGAATTGGGAGATAATGGTTTCTT TATGACCGTCTGTACCGTTGATGAGATCGCCTACGAAGGTGGACCGGCCA AAACGCGAAAAGAAGCAGAGAAAAATGCAGCGGAGGCAGCTCTTAAAGAA CTCGGGTTAATGGCTGTTCGAGAACAATAAATAGAGAATGGGTGACTACA TTTCAGGGATAGGATATGGAGAATTTTTAAACGGTGAACGGGTCGAAGCG GAGCACGACCGGCAgtgtgttttcaaaaatatactttatATCAGAAACTA TGACAGCGTTATCGGACATGACTTTCAGTTATACATACAATTACTTTGAT GATGTGTATTTGATAAAGTGTACAGTTTACTGATTTGAACAATATCCGCC AGATTTCATTTTCCATGATGGTTTTTATTTGATGTATCTGATAtacgggg aaaattttcgtcggggaaaagtgacgaaattttggccaagtgacgaatat ttttccccgacgaaagtTTTCGCTGGCCTTAATGCgcttaccaactacca gcaagtgacgaatatttttcctcgacgtaaattttccccgacgaaaattt tccccgacgaaattttccccgataaggtatgtgcTGAAATATGATAAATG TAAATGTTATTCATAATGTATAAAGTTCACGATTCTTTATGACAAAACAT TTTATTTCGATGCgattttattttccattttatgagtagagtattatttt ttttaaaggttttaaatagAACATGACATGATTATAAtcaaaagtctaaa aata

Coding sequence (CDS) from alignment at sc0000109:518248..525301+

>TCONS_00010722 ID=TCONS_00010722|Name=TCONS_00010722|organism=Clytia hemisphaerica|type=CDS|length=2892bp|location=Sequence derived from alignment at sc0000109:518248..525301+ (Clytia hemisphaerica)
AACTTTACCGCCGAAGCTGCTACAGACACTCCTAAAGATGCAGACCTTAG
AGCTGCATTTACAGCGCTCAAAGGGTTAGGATATTTCAACACAGATATGG
TTTATACTGCAGCCACCTTTACAAACACTGGCAAGAAACGGTCCAGTGTT
AGTGGTGAACCAGACAACTCTGCAGCAACAAAGAAAATGTGTTTCGAGAA
AAACTCAAAGTCGTTCAAAAGCCGACTTAACGAACTAGCGCAACAGAACA
AGTTGCAGCAACCAACGTATGAGACGATTAGCACGACAAATGGATTTTTC
ACAACAGTCACTTTCAACGGGCGGCAATTCAAGAGTGCATCGTGTATGAG
TAAGAAGAAGGATTCCGAACAGAACGCATCAGAAGTCGCTTTGACTTTCT
TGACCAGCGGCCAACAAGCAAATGGAGAACAAAATGGAAAGACAGCTGAT
GaTGTTGCAGATATGATCAAAAGTGCTCGCGTAGGTTCAAACGTCATGAA
TTTATCCTTGAAAAATCGTTTACAAGAGTATTGCCAACGTTTGAAGAAAG
AACTACCCACCTATAAATCTGAATTGGGAGATAATGGTTTCTTTATGACC
GTCTGTACCGTTGATGAGATCGCCTACGAAGGTGGACCGGCCAAAACGCG
AAAAGAAGCAGAGAAAAATGCAGCGGAGGCAGCTCTTAAAGAACTCGGGT
TAATGGCTGTTCGAGAACAATAAAACTTTACCGCCGAAGCTGCTACAGAC
ACTCCTAAAGATGCAGACCTTAGAGCTGCATTTACAGCGCTCAAAGGGTT
AGGATATTTCAACACAGATATGGTTTATACTGCAGCCACCTTTACAAACA
CTGGCAAGAAACGGTCCAGTGTTAGTGGTGAACCAGACAACTCTGCAGCA
ACAAAGAAAATGTGTTTCGAGAAAAACTCAAAGTCGTTCAAAAGCCGACT
TAACGAACTAGCGCAACAGAACAAGTTGCAGCAACCAACGTATGAGACGA
TTAGCACGACAAATGGATTTTTCACAACAGTCACTTTCAACGGGCGGCAA
TTCAAGAGTGCATCGTGTATGAGTAAGAAGAAGGATTCCGAACAGAACGC
ATCAGAAGTCGCTTTGACTTTCTTGACCAGCGGCCAACAAGCAAATGGAG
AACAAAATGGAAAGACAGCTGATGaTGTTGCAGATATGATCAAAAGTGCT
CGCGTAGGTTCAAACGTCATGAATTTATCCTTGAAAAATCGTTTACAAGA
GTATTGCCAACGTTTGAAGAAAGAACTACCCACCTATAAATCTGAATTGG
GAGATAATGGTTTCTTTATGACCGTCTGTACCGTTGATGAGATCGCCTAC
GAAGGTGGACCGGCCAAAACGCGAAAAGAAGCAGAGAAAAATGCAGCGGA
GGCAGCTCTTAAAGAACTCGGGTTAATGGCTGTTCGAGAACAATAAAACT
TTACCGCCGAAGCTGCTACAGACACTCCTAAAGATGCAGACCTTAGAGCT
GCATTTACAGCGCTCAAAGGGTTAGGATATTTCAACACAGATATGGTTTA
TACTGCAGCCACCTTTACAAACACTGGCAAGAAACGGTCCAGTGTTAGTG
GTGAACCAGACAACTCTGCAGCAACAAAGAAAATGTGTTTCGAGAAAAAC
TCAAAGTCGTTCAAAAGCCGACTTAACGAACTAGCGCAACAGAACAAGTT
GCAGCAACCAACGTATGAGACGATTAGCACGACAAATGGATTTTTCACAA
CAGTCACTTTCAACGGGCGGCAATTCAAGAGTGCATCGTGTATGAGTAAG
AAGAAGGATTCCGAACAGAACGCATCAGAAGTCGCTTTGACTTTCTTGAC
CAGCGGCCAACAAGCAAATGGAGAACAAAATGGAAAGACAGCTGATGaTG
TTGCAGATATGATCAAAAGTGCTCGCGTAGGTTCAAACGTCATGAATTTA
TCCTTGAAAAATCGTTTACAAGAGTATTGCCAACGTTTGAAGAAAGAACT
ACCCACCTATAAATCTGAATTGGGAGATAATGGTTTCTTTATGACCGTCT
GTACCGTTGATGAGATCGCCTACGAAGGTGGACCGGCCAAAACGCGAAAA
GAAGCAGAGAAAAATGCAGCGGAGGCAGCTCTTAAAGAACTCGGGTTAAT
GGCTGTTCGAGAACAATAAAACTTTACCGCCGAAGCTGCTACAGACACTC
CTAAAGATGCAGACCTTAGAGCTGCATTTACAGCGCTCAAAGGGTTAGGA
TATTTCAACACAGATATGGTTTATACTGCAGCCACCTTTACAAACACTGG
CAAGAAACGGTCCAGTGTTAGTGGTGAACCAGACAACTCTGCAGCAACAA
AGAAAATGTGTTTCGAGAAAAACTCAAAGTCGTTCAAAAGCCGACTTAAC
GAACTAGCGCAACAGAACAAGTTGCAGCAACCAACGTATGAGACGATTAG
CACGACAAATGGATTTTTCACAACAGTCACTTTCAACGGGCGGCAATTCA
AGAGTGCATCGTGTATGAGTAAGAAGAAGGATTCCGAACAGAACGCATCA
GAAGTCGCTTTGACTTTCTTGACCAGCGGCCAACAAGCAAATGGAGAACA
AAATGGAAAGACAGCTGATGaTGTTGCAGATATGATCAAAAGTGCTCGCG
TAGGTTCAAACGTCATGAATTTATCCTTGAAAAATCGTTTACAAGAGTAT
TGCCAACGTTTGAAGAAAGAACTACCCACCTATAAATCTGAATTGGGAGA
TAATGGTTTCTTTATGACCGTCTGTACCGTTGATGAGATCGCCTACGAAG
GTGGACCGGCCAAAACGCGAAAAGAAGCAGAGAAAAATGCAGCGGAGGCA
GCTCTTAAAGAACTCGGGTTAATGGCTGTTCGAGAACAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006010XLOC_006010Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010722-exon-sc0000109-1491911889:518248..518378TCONS_00010722-exon-sc0000109-1491911889:518248..518378Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1510915933:518248..518378TCONS_00010722-exon-sc0000109-1510915933:518248..518378Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1575043694:518248..518378TCONS_00010722-exon-sc0000109-1575043694:518248..518378Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1491911889:518702..518904TCONS_00010722-exon-sc0000109-1491911889:518702..518904Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1510915933:518702..518904TCONS_00010722-exon-sc0000109-1510915933:518702..518904Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1575043694:518702..518904TCONS_00010722-exon-sc0000109-1575043694:518702..518904Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1491911889:522501..522618TCONS_00010722-exon-sc0000109-1491911889:522501..522618Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1510915933:522501..522618TCONS_00010722-exon-sc0000109-1510915933:522501..522618Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1575043694:522501..522618TCONS_00010722-exon-sc0000109-1575043694:522501..522618Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1491911889:524406..525301TCONS_00010722-exon-sc0000109-1491911889:524406..525301Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1510915933:524406..525301TCONS_00010722-exon-sc0000109-1510915933:524406..525301Clytia hemisphaericaexon
TCONS_00010722-exon-sc0000109-1575043694:524406..525301TCONS_00010722-exon-sc0000109-1575043694:524406..525301Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Putative dsRNA binding proteinTCONS_00010722-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:518248..525301 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.5549 15.6558 5.16788 5.37678 67.1815 53.7485 49.34 53.7379 43.715 39.133 54.3554 58.6832 51.6561 63.6819 43.7981 41.1695 47.1416 43.4634 34.5153 29.3053 43.6064 40.5113 58.0295 50.6098 61.797 74.2472 26.0653 26.0141 32.9719 37.5034
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010722 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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