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|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009816 ID=TCONS_00009816|Name=TCONS_00009816|organism=Clytia hemisphaerica|type=transcript|length=2164bp
attttgaaaacagGGGAAAAACAACTTTGTTGCAACCAcagtttgattgt
ttgaaactATTCAAATATTATCTAAGGGTTTCCATTTTGAACTTTAAAta
gaatcaaaatttaaaatataccCTAGGAAGAAAATCTATTGATGATTgta
aaattaaagtcaaaacaaattaaGTCAATTCCTAAGGAAAGGCTGTCCAG
GGAAATAATTCACTTTGGTGTGTGCGTCCAGGTCTTTTCTGAAAAACAGA
TTCATTAACCCTTATAAAAGTTTCATAACTCAATacagatttttgtcaaa
ataataaaaaatttataccatttataccccctggaaatcatGGATTCCCC
ATTAGTTTTGAATTAATAATTATACTGTGTTCAGGGGGTTTTTGACAGAT
AAACGCAAAGTGtaatcagaaaaaaatcttcAGTCAGATTTGAAACTTTA
AAGCGGAAGGGTCGTTATTTTTTTCGTCAAAGTTCAAATCAAACATTTTT
GTCTCTGTTTTTCCAATTCAtctataattttttcaaaattttcgatttct
tcaATTTCAAGCTATCATCATGCGTGAATGTATCTCCATCCATCTCGGCC
AAGCTGGCGTCCAAATGGGAAATGCTTGTTGGGAATTGTATTGTTTAGAG
CATGGAATCCAACCTGATGGTCAAATGCCTTCAGACAAAACTATTGGAGG
CGGTGACGATTCATTCAACACCTTTTTTAGTGAAACCAGTTCTGGCAAAC
ACGTCCCAAGAGCTCTTTTTATTGATCTGGAACCCACAGTAGTTGatgaa
GTCCGAAGTGGTACATACAGACGTCTTTTTCATCCGGAACAGCTCATCAG
TGGAAAAGAAGACGCAGCTAATAACTACGCCAGAGGACATTACACCGTTG
GTAAAGAACTCATCGATGTCTTGGTTGACCGAATCAGAAAAACAGCTGAT
AAATGTACTGGTCTTCAAGGTTTCTTAGTCTTTCACTCTTTCGGTGGCGG
AACTGGATCCGGATTCACTTCCTTGTTGATGGAACGTCTTTCTGTCGAGT
acggcaaaaaaacaaaactcgaATTCGCCATTTACCCTGCTCCACAAGTC
TCTACAGCAGTTGTCGAGCCTTATAATGCCATCTTAACGACACACACAAC
CTTGGAACACACCGATTGTGCTTTCATGGTTGACAATGAGGCCATCTACG
ATATCTGTCGTGCTAATTTGTCTATTGACCGTCCGACGTACACCAATTTA
AACCGTTTGATTGGCCAAATCGTCTCCTCCATTACTGCTTCTCTCCGATT
CGATGGTGCTTTGAATGTCGATTTAACTGAGTTCCAAACTAATTTGGTCC
CATACCCACGTATTCATTTCCCCTTGGCAACTTATGCTCCAGTCATTTCT
GCTGAGAGGGCTTACCATGAACAACTAAGCGTTGATGAAATCACCACTGC
CTGTTTCGAACCAGCTAACCAAATGGTCAAATGTGATCCTCGTCATGGTA
AATATATGTCATGTTGCTTGTTATATCGTGGAGATGTTGTCCCCAAGGAT
GTCAATTCTGCTATCGCCAAGATCAAAACAAAGCGAACCATCCAATTTGT
CGATTGGTGTCCAACTGGATTCAAGATTGGAATCAACTACCAACCACCAA
CTGTAGTACCAGGAGGTGATCTTGCTAAAGTCCAAAGAGCTGTTTGCATG
TTGTCCAACACAACTGCTATTGCTGAAGCTTGGGCTCGACTTGATCATAA
ATTCGATTTGATGTACGCTAAACGTGCTTTTGTACATTGGTATGTTGGAG
AAGGTATGGAAGAAGGAGAATTTTCAGAGGCTCGTGAAGATTTGGCTGCT
TTGGAGAAAGATTACGAAGAAGTCGGTTTGGATTCTCAAGATTCCGATGA
AGAAGAAGACGATGGTGATGAATATTAAATTTCGGACAAAGTCAGCAAAT
TTCGGACACAATGAATAAATTTCGGACAAACTCTTGGACGGATTTTGTTT
ATATTCAAACAcacaatttattatttattatctgAAAATTGAAATGAGTT
AATGCTAGATGCACCGCAATGTAAATAAGAAATATTCGAAATAATGCACT
GGAACAAAGTTCACATtaattttgcttgtaaaatttttaaatgttcAAAT
AAGTTAAATATCTA Run BLAST on NCBI protein sequence of TCONS_00009816-protein >TCONS_00009816-protein ID=TCONS_00009816-protein|Name=TCONS_00009816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MRECISIHLGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETSSGKHVPRALFIDLEPTVVDEVRSGTYRRLFHPEQLISGKEDAA
NNYARGHYTVGKELIDVLVDRIRKTADKCTGLQGFLVFHSFGGGTGSGFT
SLLMERLSVEYGKKTKLEFAIYPAPQVSTAVVEPYNAILTTHTTLEHTDC
AFMVDNEAIYDICRANLSIDRPTYTNLNRLIGQIVSSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLATYAPVISAERAYHEQLSVDEITTACFEPAN
QMVKCDPRHGKYMSCCLLYRGDVVPKDVNSAIAKIKTKRTIQFVDWCPTG
FKIGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSQDSDEEEDDGD
EY Run BLAST on NCBI transcript from alignment at sc0000099:429161..433597+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009816 ID=TCONS_00009816|Name=TCONS_00009816|organism=Clytia hemisphaerica|type=transcript|length=4437bp|location=Sequence derived from alignment at sc0000099:429161..433597+ (Clytia hemisphaerica)
attttgaaaacagGGGAAAAACAACTTTGTTGCAACCAcagtttgattgt
ttgaaactATTCAAATATTATCTAAGGGTTTCCATTTTGAACTTTAAAta
gaatcaaaatttaaaatataccCTAGGAAGAAAATCTATTGATGATTgta
aaattaaagtcaaaacaaattaaGTCAATTCCTAAGGAAAGGCTGTCCAG
GGAAATAATTCACTTTGGTGTGTGCGTCCAGGTCTTTTCTGAAAAACAGA
TTCATTAACCCTTATAAAAGTTTCATAACTCAATacagatttttgtcaaa
ataataaaaaatttataccatttataccccctggaaatcatGGATTCCCC
ATTAGTTTTGAATTAATAATTATACTGTGTTCAGGGGGTTTTTGACAGAT
AAACGCAAAGTGtaatcagaaaaaaatcttcAGTCAGATTTGAAACTTTA
AAGCGGAAGGGTCGTTATTTTTTTCGTCAAAGTTCAAATCAAACATTTTT
GTCTCTGTTTTTCCAATTCAtctataattttttcaaaattttcgatttct
tcaATTTCAAGCTATCATCATGGTAAGTCATTTACAATatcaatttttat
aagaacatccaatattTTTAAACCCTTTAGATGTTCatagaattttgaat
ttaagaCTAAAAAATGATCTGAAgcattcttatttttaccattttgtgag
tatttttgtgcaatttccctAAGAAATTTGGAGTTGAATAAGAAGTTTAG
AGTGTCTGCAAAGCCTtggaatgtttttaacttgatcttaacattttggt
cgtcaaaaagccttatattcttatataagtttgttcttataaaaagaaca
tgTGACTAAATGGGCCTTTTCAGgtgaattttattgtttatggTGTTTAA
GGTATTACTGGTTTAATTTTAACACACAAAAACAtctttttattatatta
ttactCTTAATATTTTAGCGTGAATGTATCTCCATCCATCTCGGCCAAGC
TGGCGTCCAAATGGGAAATGCTTGTTGGGAATTGTATTGTTTAGAGCATG
GAATCCAACCTGATGGTCAAATGCCTTCAGACAAAACTATTGGAGGCGGT
GACGATTCATTCAACACCTTTTTTAGTGAAACCAGTTCTGGCAAACACGT
CCCAAGAGCTCTTTTTATTGATCTGGAACCCACAGTAGTTGGTAAGTCCT
TTTATATaataaattcacaaaaaattgcAATATGATTTACAACGTTGAAA
AATAATGTAAAGACTTCGTAAAGATTTTGGGAAATTAATTGAGAAAatat
ccggggggggggtacttaggcaaatggagggtatggtatgtgccgccctt
aaggggtaccttttttggatttccaaagtcccgctaagggtcaaaaaatt
agaaaatcaatttcagtcccactacgGGTAGAAGaagtaggaaaatttca
actttttaccccagaaagatcgaaatttggtcaaaatttgtcaaatttgt
cccggtaagggtcgtaaaattcacaaaattttcctttgttttcttctttt
tagtcctggtaagggtccgagggtcggaAGTTGGgtggtacccccccccc
tgtcagctcgcaaccctagtacctccacccaggttttatgactttattgt
caACATTAgtcataaaacccagctaaaatcacaaaatcttaaaatacttA
GATCTTTATGAGTAATACTATCATTTCTCTGGTACATAGCAAATGGATGT
ATACACGTTTTNcccccccccccccgggggaaaTATCCTTCCgaaacatt
gaatttttttttgttttgctttatcAGTTGTTATTTGTTGCTATCGAACC
AGATCAATAGGTATTTGAATAAAAGAATTCTGAATAAGCAATCTTGaatt
gatattttcagaatGTATCGAATAAAGTGTAAAAAACTATTCATTATTGA
GGAGAGATTTCTGTCTTGAATGTTAAGGATGTTGAAAGCTATTTCTGTGT
tgaattttaaaggttttatttttacataagtgttccctttcatatcagac
acatttcATATTAgggcagtgtctgcctattgttatattatgctgatatc
aacaaaaaaaatgtttttcttttcctatttttgaccaatcttgctccaca
tcagtgtcaattcaatttgaaaaagcttgtgaattaaaattaatgagtaa
gcaaacgatatcattcttatttaaaaacaaaacctttctttcaaatgatt
tcttttttgaatgttGAGGATGTGGTAGCTGAATGTTAACGATGTGGAAG
GTTGACTTTCGTCTTGAGTTGAATGCTAGGGACGTGGGAAGTGTTTTCAA
TGTTGAATGTTACGGATGTGGAAGATGATTTCCTTTTTGAATGTTAAGGA
TGTGGAGAAGTGATCCCCGTCCTAAATGTTAAGGATGCAGAAAGTGTTTT
CCAGCCTAAATGTTACGCTTAAGGATGTGGAAGTTGATTTAGGCCTTGAA
TTTTGGGGATGTAGAacaagattttcattttcaaaaaaaaaaacattttg
aaaatctttattttttcagatgaaGTCCGAAGTGGTACATACAGACGTCT
TTTTCATCCGGAACAGCTCATCAGTGGAAAAGAAGACGCAGCTAATAACT
ACGCCAGAGGACATTACACCGTTGGTAAAGAACTCATCGATGTCTTGGTT
GACCGAATCAGAAAAACAGCTGATAAATGTACTGGTCTTCAAGGTTTCTT
AGTCTTTCACTCTTTCGGTGGCGGAACTGGATCCGGATTCACTTCCTTGT
TGATGGAACGTCTTTCTGTCGAGTacggcaaaaaaacaaaactcgaATTC
GCCATTTACCCTGCTCCACAAGTCTCTACAGCAGTTGTCGAGCCTTATAA
TGCCATCTTAACGACACACACAACCTTGGAACACACCGATTGTGCTTTCA
TGGTTGACAATGAGGCCATCTACGATATCTGTCGTGCTAATTTGTCTATT
GACCGTCCGACGTACACCAATTTAAACCGTTTGATTGGCCAAATCGTCTC
CTCCATTACTGCTTCTCTCCGATTCGATGGTGCTTTGAATGTCGATTTAA
CTGAGTTCCAAACTAATTTGGTCCCATACCCACGTATTCATTTCCCCTTG
GCAACTTATGCTCCAGTCATTTCTGCTGAGAGGGCTTACCATGAACAACT
AAGCGTTGATGAAATCACCACTGCCTGTTTCGAACCAGCTAACCAAATGG
TCAAATGTGATCCTCGTCATGGTAAATATATGTCATGTTGCTTGTTATAT
CGTGGAGATGTTGTCCCCAAGGATGTCAATTCTGCTATCGCCAAGATCAA
AACAAAGCGAACCATCCAATTTGTCGATTGGTGTCCAACTGGATTCAAGA
TTGGAATCAACTACCAACCACCAACTGTAGTACCAGGAGGTGATCTTGCT
AAAGTCCAAAGAGCTGTTTGCATGTTGTCCAACACAACTGCTATTGCTGA
AGCTTGGGCTCGACTTGATCATAAATTCGATTTGATGTACGCTAAACGTG
CTTTTGTACATTGGTATGTTGGAGAAGGTTAGTTTAAGACTTTTTTCTTC
TGTTTGCGAAGATTTTCAATGCTTTACTTCGATTTCACTTTCTAGTTTCT
GATGCATGCTGGAATGCTATATTTATAGAGACCACAGCATCACTCTGATA
AAAGAGTATGGGGGAGTATGTCAGGTATTACATGTGTTGTGGTGACGATA
CTCATAGGTTCAACACCTGCGAATACAAATTTTCTCCTGTGTAGTTCGAG
TATCTTTGTCCATACACCAATAACTCAGGGTTAGCAGTGTCTGGCAAGCG
TGTTAATTCCCCTATCCTATTTATCCAGGGATAGGGCCCATTCTCTCTTC
TCTCACAGCATCACATTTTCAGATGCTACTTTTAAGGAAAGCAATATTTA
GTGCTTAataataactttaaaaaaatattttacaggaTACTAACAAATAT
TCAAGGTGCTTATTAAGTTGTTAGATAATACACTGATCTTAATTTTTAAC
GTTTGATTTTCCTGTTCTGTTTTAAGGTATGGAAGAAGGAGAATTTTCAG
AGGCTCGTGAAGATTTGGCTGCTTTGGAGAAAGATTACGAAGAAGTCGGT
TTGGATTCTCAAGATTCCGATGAAGAAGAAGACGATGGTGATGAATATTA
AATTTCGGACAAAGTCAGCAAATTTCGGACACAATGAATAAATTTCGGAC
AAACTCTTGGACGGATTTTGTTTATATTCAAACAcacaatttattattta
ttatctgAAAATTGAAATGAGTTAATGCTAGATGCACCGCAATGTAAATA
AGAAATATTCGAAATAATGCACTGGAACAAAGTTCACATtaattttgctt
gtaaaatttttaaatgttcAAATAAGTTAAATATCTA Coding sequence (CDS) from alignment at sc0000099:429161..433597+ >TCONS_00009816 ID=TCONS_00009816|Name=TCONS_00009816|organism=Clytia hemisphaerica|type=CDS|length=5436bp|location=Sequence derived from alignment at sc0000099:429161..433597+ (Clytia hemisphaerica)
ATGCGTGAATGTATCTCCATCCATCTCGGCCAAGCTGGCGTCCAAATGGG
AAATGCTTGTTGGGAATTGTATTGTTTAGAGCATGGAATCCAACCTGATG
GTCAAATGCCTTCAGACAAAACTATTGGAGGCGGTGACGATTCATTCAAC
ACCTTTTTTAGTGAAACCAGTTCTGGCAAACACGTCCCAAGAGCTCTTTT
TATTGATCTGGAACCCACAGTAGTTGatgaaGTCCGAAGTGGTACATACA
GACGTCTTTTTCATCCGGAACAGCTCATCAGTGGAAAAGAAGACGCAGCT
AATAACTACGCCAGAGGACATTACACCGTTGGTAAAGAACTCATCGATGT
CTTGGTTGACCGAATCAGAAAAACAGCTGATAAATGTACTGGTCTTCAAG
GTTTCTTAGTCTTTCACTCTTTCGGTGGCGGAACTGGATCCGGATTCACT
TCCTTGTTGATGGAACGTCTTTCTGTCGAGTacggcaaaaaaacaaaact
cgaATTCGCCATTTACCCTGCTCCACAAGTCTCTACAGCAGTTGTCGAGC
CTTATAATGCCATCTTAACGACACACACAACCTTGGAACACACCGATTGT
GCTTTCATGGTTGACAATGAGGCCATCTACGATATCTGTCGTGCTAATTT
GTCTATTGACCGTCCGACGTACACCAATTTAAACCGTTTGATTGGCCAAA
TCGTCTCCTCCATTACTGCTTCTCTCCGATTCGATGGTGCTTTGAATGTC
GATTTAACTGAGTTCCAAACTAATTTGGTCCCATACCCACGTATTCATTT
CCCCTTGGCAACTTATGCTCCAGTCATTTCTGCTGAGAGGGCTTACCATG
AACAACTAAGCGTTGATGAAATCACCACTGCCTGTTTCGAACCAGCTAAC
CAAATGGTCAAATGTGATCCTCGTCATGGTAAATATATGTCATGTTGCTT
GTTATATCGTGGAGATGTTGTCCCCAAGGATGTCAATTCTGCTATCGCCA
AGATCAAAACAAAGCGAACCATCCAATTTGTCGATTGGTGTCCAACTGGA
TTCAAGATTGGAATCAACTACCAACCACCAACTGTAGTACCAGGAGGTGA
TCTTGCTAAAGTCCAAAGAGCTGTTTGCATGTTGTCCAACACAACTGCTA
TTGCTGAAGCTTGGGCTCGACTTGATCATAAATTCGATTTGATGTACGCT
AAACGTGCTTTTGTACATTGGTATGTTGGAGAAGGTATGGAAGAAGGAGA
ATTTTCAGAGGCTCGTGAAGATTTGGCTGCTTTGGAGAAAGATTACGAAG
AAGTCGGTTTGGATTCTCAAGATTCCGATGAAGAAGAAGACGATGGTGAT
GAATATTAAATGCGTGAATGTATCTCCATCCATCTCGGCCAAGCTGGCGT
CCAAATGGGAAATGCTTGTTGGGAATTGTATTGTTTAGAGCATGGAATCC
AACCTGATGGTCAAATGCCTTCAGACAAAACTATTGGAGGCGGTGACGAT
TCATTCAACACCTTTTTTAGTGAAACCAGTTCTGGCAAACACGTCCCAAG
AGCTCTTTTTATTGATCTGGAACCCACAGTAGTTGatgaaGTCCGAAGTG
GTACATACAGACGTCTTTTTCATCCGGAACAGCTCATCAGTGGAAAAGAA
GACGCAGCTAATAACTACGCCAGAGGACATTACACCGTTGGTAAAGAACT
CATCGATGTCTTGGTTGACCGAATCAGAAAAACAGCTGATAAATGTACTG
GTCTTCAAGGTTTCTTAGTCTTTCACTCTTTCGGTGGCGGAACTGGATCC
GGATTCACTTCCTTGTTGATGGAACGTCTTTCTGTCGAGTacggcaaaaa
aacaaaactcgaATTCGCCATTTACCCTGCTCCACAAGTCTCTACAGCAG
TTGTCGAGCCTTATAATGCCATCTTAACGACACACACAACCTTGGAACAC
ACCGATTGTGCTTTCATGGTTGACAATGAGGCCATCTACGATATCTGTCG
TGCTAATTTGTCTATTGACCGTCCGACGTACACCAATTTAAACCGTTTGA
TTGGCCAAATCGTCTCCTCCATTACTGCTTCTCTCCGATTCGATGGTGCT
TTGAATGTCGATTTAACTGAGTTCCAAACTAATTTGGTCCCATACCCACG
TATTCATTTCCCCTTGGCAACTTATGCTCCAGTCATTTCTGCTGAGAGGG
CTTACCATGAACAACTAAGCGTTGATGAAATCACCACTGCCTGTTTCGAA
CCAGCTAACCAAATGGTCAAATGTGATCCTCGTCATGGTAAATATATGTC
ATGTTGCTTGTTATATCGTGGAGATGTTGTCCCCAAGGATGTCAATTCTG
CTATCGCCAAGATCAAAACAAAGCGAACCATCCAATTTGTCGATTGGTGT
CCAACTGGATTCAAGATTGGAATCAACTACCAACCACCAACTGTAGTACC
AGGAGGTGATCTTGCTAAAGTCCAAAGAGCTGTTTGCATGTTGTCCAACA
CAACTGCTATTGCTGAAGCTTGGGCTCGACTTGATCATAAATTCGATTTG
ATGTACGCTAAACGTGCTTTTGTACATTGGTATGTTGGAGAAGGTATGGA
AGAAGGAGAATTTTCAGAGGCTCGTGAAGATTTGGCTGCTTTGGAGAAAG
ATTACGAAGAAGTCGGTTTGGATTCTCAAGATTCCGATGAAGAAGAAGAC
GATGGTGATGAATATTAAATGCGTGAATGTATCTCCATCCATCTCGGCCA
AGCTGGCGTCCAAATGGGAAATGCTTGTTGGGAATTGTATTGTTTAGAGC
ATGGAATCCAACCTGATGGTCAAATGCCTTCAGACAAAACTATTGGAGGC
GGTGACGATTCATTCAACACCTTTTTTAGTGAAACCAGTTCTGGCAAACA
CGTCCCAAGAGCTCTTTTTATTGATCTGGAACCCACAGTAGTTGatgaaG
TCCGAAGTGGTACATACAGACGTCTTTTTCATCCGGAACAGCTCATCAGT
GGAAAAGAAGACGCAGCTAATAACTACGCCAGAGGACATTACACCGTTGG
TAAAGAACTCATCGATGTCTTGGTTGACCGAATCAGAAAAACAGCTGATA
AATGTACTGGTCTTCAAGGTTTCTTAGTCTTTCACTCTTTCGGTGGCGGA
ACTGGATCCGGATTCACTTCCTTGTTGATGGAACGTCTTTCTGTCGAGTa
cggcaaaaaaacaaaactcgaATTCGCCATTTACCCTGCTCCACAAGTCT
CTACAGCAGTTGTCGAGCCTTATAATGCCATCTTAACGACACACACAACC
TTGGAACACACCGATTGTGCTTTCATGGTTGACAATGAGGCCATCTACGA
TATCTGTCGTGCTAATTTGTCTATTGACCGTCCGACGTACACCAATTTAA
ACCGTTTGATTGGCCAAATCGTCTCCTCCATTACTGCTTCTCTCCGATTC
GATGGTGCTTTGAATGTCGATTTAACTGAGTTCCAAACTAATTTGGTCCC
ATACCCACGTATTCATTTCCCCTTGGCAACTTATGCTCCAGTCATTTCTG
CTGAGAGGGCTTACCATGAACAACTAAGCGTTGATGAAATCACCACTGCC
TGTTTCGAACCAGCTAACCAAATGGTCAAATGTGATCCTCGTCATGGTAA
ATATATGTCATGTTGCTTGTTATATCGTGGAGATGTTGTCCCCAAGGATG
TCAATTCTGCTATCGCCAAGATCAAAACAAAGCGAACCATCCAATTTGTC
GATTGGTGTCCAACTGGATTCAAGATTGGAATCAACTACCAACCACCAAC
TGTAGTACCAGGAGGTGATCTTGCTAAAGTCCAAAGAGCTGTTTGCATGT
TGTCCAACACAACTGCTATTGCTGAAGCTTGGGCTCGACTTGATCATAAA
TTCGATTTGATGTACGCTAAACGTGCTTTTGTACATTGGTATGTTGGAGA
AGGTATGGAAGAAGGAGAATTTTCAGAGGCTCGTGAAGATTTGGCTGCTT
TGGAGAAAGATTACGAAGAAGTCGGTTTGGATTCTCAAGATTCCGATGAA
GAAGAAGACGATGGTGATGAATATTAAATGCGTGAATGTATCTCCATCCA
TCTCGGCCAAGCTGGCGTCCAAATGGGAAATGCTTGTTGGGAATTGTATT
GTTTAGAGCATGGAATCCAACCTGATGGTCAAATGCCTTCAGACAAAACT
ATTGGAGGCGGTGACGATTCATTCAACACCTTTTTTAGTGAAACCAGTTC
TGGCAAACACGTCCCAAGAGCTCTTTTTATTGATCTGGAACCCACAGTAG
TTGatgaaGTCCGAAGTGGTACATACAGACGTCTTTTTCATCCGGAACAG
CTCATCAGTGGAAAAGAAGACGCAGCTAATAACTACGCCAGAGGACATTA
CACCGTTGGTAAAGAACTCATCGATGTCTTGGTTGACCGAATCAGAAAAA
CAGCTGATAAATGTACTGGTCTTCAAGGTTTCTTAGTCTTTCACTCTTTC
GGTGGCGGAACTGGATCCGGATTCACTTCCTTGTTGATGGAACGTCTTTC
TGTCGAGTacggcaaaaaaacaaaactcgaATTCGCCATTTACCCTGCTC
CACAAGTCTCTACAGCAGTTGTCGAGCCTTATAATGCCATCTTAACGACA
CACACAACCTTGGAACACACCGATTGTGCTTTCATGGTTGACAATGAGGC
CATCTACGATATCTGTCGTGCTAATTTGTCTATTGACCGTCCGACGTACA
CCAATTTAAACCGTTTGATTGGCCAAATCGTCTCCTCCATTACTGCTTCT
CTCCGATTCGATGGTGCTTTGAATGTCGATTTAACTGAGTTCCAAACTAA
TTTGGTCCCATACCCACGTATTCATTTCCCCTTGGCAACTTATGCTCCAG
TCATTTCTGCTGAGAGGGCTTACCATGAACAACTAAGCGTTGATGAAATC
ACCACTGCCTGTTTCGAACCAGCTAACCAAATGGTCAAATGTGATCCTCG
TCATGGTAAATATATGTCATGTTGCTTGTTATATCGTGGAGATGTTGTCC
CCAAGGATGTCAATTCTGCTATCGCCAAGATCAAAACAAAGCGAACCATC
CAATTTGTCGATTGGTGTCCAACTGGATTCAAGATTGGAATCAACTACCA
ACCACCAACTGTAGTACCAGGAGGTGATCTTGCTAAAGTCCAAAGAGCTG
TTTGCATGTTGTCCAACACAACTGCTATTGCTGAAGCTTGGGCTCGACTT
GATCATAAATTCGATTTGATGTACGCTAAACGTGCTTTTGTACATTGGTA
TGTTGGAGAAGGTATGGAAGAAGGAGAATTTTCAGAGGCTCGTGAAGATT
TGGCTGCTTTGGAGAAAGATTACGAAGAAGTCGGTTTGGATTCTCAAGAT
TCCGATGAAGAAGAAGACGATGGTGATGAATATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009816-exon-sc0000099-1491911889:429161..429732 | TCONS_00009816-exon-sc0000099-1491911889:429161..429732 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1510915933:429161..429732 | TCONS_00009816-exon-sc0000099-1510915933:429161..429732 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1575043694:429161..429732 | TCONS_00009816-exon-sc0000099-1575043694:429161..429732 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1491911889:430129..430351 | TCONS_00009816-exon-sc0000099-1491911889:430129..430351 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1510915933:430129..430351 | TCONS_00009816-exon-sc0000099-1510915933:430129..430351 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1575043694:430129..430351 | TCONS_00009816-exon-sc0000099-1575043694:430129..430351 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1491911889:431730..432737 | TCONS_00009816-exon-sc0000099-1491911889:431730..432737 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1510915933:431730..432737 | TCONS_00009816-exon-sc0000099-1510915933:431730..432737 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1575043694:431730..432737 | TCONS_00009816-exon-sc0000099-1575043694:431730..432737 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1491911889:433237..433597 | TCONS_00009816-exon-sc0000099-1491911889:433237..433597 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1510915933:433237..433597 | TCONS_00009816-exon-sc0000099-1510915933:433237..433597 | Clytia hemisphaerica | exon |
| TCONS_00009816-exon-sc0000099-1575043694:433237..433597 | TCONS_00009816-exon-sc0000099-1575043694:433237..433597 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:429161..433597 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007017 | microtubule-based process |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005874 | microtubule |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0005200 | structural constituent of cytoskeleton |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007017 |
microtubule-based process |
| cellular_component |
GO:0005874 |
microtubule |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
| molecular_function |
GO:0005200 |
structural constituent of cytoskeleton |
Blast
BLAST of TCONS_00009816 vs. Swiss-Prot (Human)
Match: TBA3C (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 842.803 bits (2176), Expect = 0.000e+0 Identity = 402/437 (91.99%), Postives = 428/437 (97.94%), Query Frame = 3
Query: 570 MRECISIHLGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETSSGKHVPRALFIDLEPTVVDEVRSGTYRRLFHPEQLISGKEDAANNYARGHYTVGKELIDVLVDRIRKTADKCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVEYGKKTKLEFAIYPAPQVSTAVVEPYNAILTTHTTLEHTDCAFMVDNEAIYDICRANLSIDRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAERAYHEQLSVDEITTACFEPANQMVKCDPRHGKYMSCCLLYRGDVVPKDVNSAIAKIKTKRTIQFVDWCPTGFKIGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGL 1880
MRECISIH+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET +GKHVPRA+F+DLEPTVVDEVR+GTYR+LFHPEQLI+GKEDAANNYARGHYT+GKE++D+++DRIRK AD CTGLQGFL+FHSFGGGTGSGF SLLMERLSV+YGKK+KLEFAIYPAPQVSTAVVEPYN+ILTTHTTLEH+DCAFMVDNEAIYDICR NL I+RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAE+AYHEQLSV EIT ACFEPANQMVKCDPRHGKYM+CC+LYRGDVVPKDVN+AIA IKTKRTIQFVDWCPTGFK+GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 437
The following BLAST results are available for this feature:
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