TCONS_00009479 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009479
Unique NameTCONS_00009479
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1981

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009479 ID=TCONS_00009479|Name=TCONS_00009479|organism=Clytia hemisphaerica|type=transcript|length=1981bp
CTttacagaagaaattttacTTATCCAAAATTTTACCAATCCAATTTTCT
TCCCTAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaactattATC
ACCAACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAAACAAG
AAGATATCAGAATTCCAGAGCCAGAGAAGAAGATCAAACTTGGAGCTGAT
TTGCTCAATGCTTTTCCAGAGATCgctgaaaattttgatattatcAAGAA
GGTTGGAGAGGGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTG
ATTCATCCAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCT
GGTCGCATAGAAAATGAATTAAAATGCTTACAAGAGCTAGGtaATAAGAA
TAATGTTCTTGGCATCAAGACAACACTGCGAAGGAACGATCACATTGTAT
TCGTCCTGCCTTACTTTCCATACAGAAAATTTAATGATGTGATGGACCGT
ATGAGTGCAAATGATATTCAGAATTACATGAGAAACTTATTGATAGCTTT
GAAGCATGTTCactcttataaaattattcacCGGGATATCAAACCAAGTA
ATTTCCTTTATTGCCAAGAAACAGACAGCTATGCATTGATCGACTTTGGT
CTAGCCATGCCTGTCCCTGGAACAAAAGGATGTTTCCTTTCAGATTACAC
TGCAACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTCTTCATCAAAAG
CTTATGCTAAACCATGCAAGCACCCGAGACTTGATACATGTAACATCTGT
AGAAATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTCCAGGTTTTCG
TTCACCAGAGGTATTGATGAGGTATCCTAACCAAACGACAGCTGTAGATA
TGTGGGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCA
TTCTTCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATAATTGTCCT
CTTTGGCAgtaagaaaattaagaaaatggcTGACTCGATTGGAAAAACTT
TCGATTGTTCACCTCCAGTAGAGAATCCGGACACTTTGAAAGTTATCTGT
GAAAAATTAGCTCGCAGACAATGCTCTTTACATAGAGACTACAAAGAAGG
ATCTGCAAAACGAAAACTTAGTGATCCAAGTGCAGCAGCCACTAATAGTC
CAAACAAGAAACAAGTAAGCGAGACAATAATTAAAGACTCTAATCAAAGT
AATCGAATCTTAGCCGACATAACATTGGGTAAGAACCGACTGACTCAATC
AGAATCGACCTCAAAATGTACGAGTTCTATTTCAAAGTCTAAAAAATCTA
AACAACCAGTTTGTGCTTGTATACCTGAAAGTGCGTATGATTTGTTGGGG
AAACTACTTGAACTGAACCCTGATGATCGAATCAGTGCATCTGATGGTTT
AAAACATCCGTTTATCACACATTATTGAGCGTGGTTAGTTATCATTATAA
AGAATCATTGCTAATTGGTGCTTGTGCTTTTTACCGATTTTATGtttaga
aaagtttttgaagaCCTGGATTGACTGGATTCGTTCGTTcggtttttttg
ttttctacatttttttaaCTCCCTCCAAAGAATCACCCATTTGACTGTCA
TTAAAATTTTTATGTatggttctttttattattatggGTTGTTTTTCAAC
AATAAAGAGTGAATTGCATTCAAACCGTGCAGTCATATTTTAtggtttaa
gaaaaattttgagagcatTGCCGTTGGTAGACTCAAATATTTGAATAACA
AATAATAGacgtttttgatgttttaaagTGTGCCCGGAAAAAAAGTGGTG
CACCCATACAAAGGAAAATTTGTATGATTTTTGCAAGACACTACATTAAA
AAACATTTATTAAAAATAATGCAGttttagttttgtttgtttttagcata
cttttgtatatattttgaaTAAAGATAAAAA
Run BLAST on NCBI

transcript from alignment at sc0000095:414376..423220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009479 ID=TCONS_00009479|Name=TCONS_00009479|organism=Clytia hemisphaerica|type=transcript|length=8845bp|location=Sequence derived from alignment at sc0000095:414376..423220+ (Clytia hemisphaerica)
CTttacagaagaaattttacTTATCCAAAATTTTACCAATCCAATTTTCT TCCCTAAAGCTAAAGcagagttaaaaaatggaaaacaaaaaactattATC ACCAACACGGCAGAGTTTGTTTCGAGCATGCAAGTCTCCTGCTAAACAAG AAGATATCAGAATTCCAGAGCCAGGTAAAACGTATTTTATGTTATACTCA AGGCTGAATTTCACGACTAGTCTTGTCATCCAGATCAGACTCAAtcaaac tgaaaataattaattcaTTGACttaaacacatgattttcaaacacattgt cttttttattcaaaattgtaGAGAAGAAGATCAAACTTGGAGCTGATTTG CTCAATGCTTTTCCAGAGATCgctgaaaattttgatattatcAAGAAGGT TGGAGAGGgtaattattaaatatttcaagtGAAACAATTGACCATCAAGG ACTTGCAGCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGCTTTTT TAACTTTCGAATTTTGCTCCAAAAACACTCCAACACTAGTTTTCTCTGGA GTATAGCCAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAGTATAA TCTCAAAGTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTATTTTTA GCACTGCTTAGCAAGACTAAtccaggaaaatattttttgcattattagtt ttcattttcactttctaagctttcaaaaatttcatatatacccgtgacct gtgacctgtgttttacactaaccgtacAATCCCTATCATAAGTTattttt tactgtcagactaaTACTAGATTATCATTCAATTCATACAAAATAATAAA GGAAATAATCTTAATAAATCTTATCAACTTAAGCTTTTGATTGATTTATT AATTAATAATCATTAACTAATGAAATAATACTTTagattaatttcatttt ctagGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTCATC CAAAAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTCGCA TAGAAAATGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTATCATTC TATCCTTTTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTCAGCCT ACTATCACAGCCGTCNGTATTTCAAGTGAAACAATTGACCATCAAGGACT TGCAGCTAGCAGGTTCACTGGTCCTCTGATAAAAAATTGGGCTTTTTTAA CTTTCAAATTTTACTCCAAAAACACTCCAACACTAGTTTTCTCTGGAGTA TAGCCAAATGATCAGTGAATGGCTAACACAGGTCATTTAAAGTATAATCT CAAAGTTTATATAAGATTTAATTGTTTAAAAAAGGTATTTATTTTTAGCA CTGCTTAGCAAGACTAAtccaggaaaatattttttgcattattatttttc attttcactttctaAGCTTTCAAAAACTTCATATatacccgtgacctgtg acctgtgttttacactaaccgtacAATCCCTATCATAAGTTattttttac tgtcagactaaTACTAGATTATCATTCAATTCATACAAAATAATAAAGGA AATAATCTTAATAAATCTTATCAATTTATGCTTTTGATTGATTTATTAAT TAATAATCATTAACTAATGAAATAATACTTTCgattaatttcattttcta gGTACATTTAGCAAAGTGTTTCTTGCCAAAATGAAATGTGATTCATCCAA AAAGGTTGCTTTTAAACATCTAGTTCCAACAAGCTCGCCTGGTCGCATAG AAAATGAATTAAAATGCTTACAAGAGCTAGGGTAAGTTTTATCATTCTAT CCTTTTTTCTGTATAACAAAATTGGTAATATTGTGCTATCTCAGCCTACT ATCACAGCCGTcgtagatttataaagccgGGTTAGATGTCATgctttaag cttttccaagcaacaaaaattgaaaatcgcaaaaaatattgttactATTG TTTTTGAACACCTGCgaggcttctgattggtcaagggttgaaattctttt gtaatgtcacttgacctaggtaggatttacTACATAGATaaggcacactt ttcagccaaaacacAATACTCAGCTGTTCTGATAACATAAAGTTTTAGAA AGTGTAAAACAATTTCTGATTTCAGTTTGAATATTTTTCTCTCTAGAATT TTGATTGGCAACTTGAAAATTAACATATTAAtaaattattaattattttC CAGTTGTctcatctttttctttttatagtaATAAGAATAATGTTCTTGGC ATCAAGACAACACTGCGAAGGAACGATCACATTGTATTCGTCCTGCCTTA CTTTCCATACAGAAAATTTAATGTGAGCTATTAAGATTATTTGCATgttc ctaaaaaaaattaaatctgtGAAATGCATGATAataaagtctgttccaaa aattcaacataagaagacaaaataaccccagcgagatcgctcaatgtttc aatttcagtctaaaaaggctgattttttCCAATTCTGGGTAGCAAAGTGC ATGAAAGcaggggttattttgtctttttatgttgaatattagtacgaGAC ACCTTTTAGCAACCATTTTGCCCTTTTCCTGCCCATTCATGGCCTTagaa tgggcaaaaaatgccatttttactcatttttcccTTTAGTGAGAATCAAA GACCTCCCTGGGAAATGCTGGATTTTTGATCTAGGAGGTTAAAAATGGAG CAAAATGTTTTACAATAGATTtttactttcacaaaaaaatactatacttt gaattttttgacttcacatttgacgatctaccctattGTTATTCACTTAA CAAAAAAGGAAGCAAAAGTATTGCAAAcgataattttcatttttaattga attGCTTATTGCTTATCAGCTCAGTTGATAGAGCATTCACCTTACACTCC AAGGGTTGTGAGTTTAATCCCCGGTCATCGCCAATTCAgcgaatgagtag cttagattgggtaatttGTTCTAAGCAGTAAGTTACTGGgggctgagagt aggtgtggcgctccacctcagtaTTCGATTTCCCTGGtctagaaaagggg atagactccgtCATTCCTGGCTCCGCTGACACCCACCAGATGAATAAACT CACTTTACTTTCCTTATAATTGCAGGATGTGATGGACCGTATGAGTGCAA ATGATATTCAGAATTACATGAGAAACTTATTGATAGCTTTGAAGCATGTT CactcttataaaattattcacCGGGATATCAAACCAAGTAATTTCCTTTA TTGCCAAGAAACAGACAGGTACAATTATCGATATCATTTGAATTCATAAA ATATTtaaggattaattaatcctttttgAACCTCTATACTTTGCTTTATT CTGGAAAATCTGTTTATATAGCTATATTCAGCTTTTGTACCTAATTCCAC CccttgaattttttatttttttctctcaacattttccacccagaacCCAG GCGGAATGCTTACTATGCCAGGGAATTTTAACTTGTGACGACTCCATTCG CCATTTCTGCGATGGAGCCACTGAAACCTAGTTTTGGATTCACAAAGTTG TTGAAAAGTTTACTTTCAAATATAGTATCTAACTGTTTGTGTTTTTCAGC TATGCATTGATCGACTTTGGTCTAGCCATGCCTGTCCCTGGAACAAAAGG ATGTTTCCTTTCAGGTGAATAGAAGTTTCTCATTGGTTCATTTACTGTAC AATGCTCACACTTTTCCATCTCAAATGTGGATTTTCTTTActtactttca aattttgaaggattCGAATCATTCACTAATTCTACCTAAAAATTACTTAC ATAATTAGTTATTTTCTGGGAAAGCCAAATCCGGGCGAATTCATTACAGT TCTACTTTGTCTTTCCTTAAAACATAGTTAATATAAGAAGTagaagattt ttcaatattATTAATGGTTTTCTTTCAGATTACACTGCAACTGTTGTGGG AATGTCAGACAATAAGAAGCCTTCTTCATCAAAAGCTTATGCTAAACCAT GCAAGCACCCGAGACTTGATACATGTAACATCTGTAGAAATAGGTGACTA TACTTTATATTGTAcacaaatttcatgtttaaCCTTTGGAAACTACTTGT TACACTCATTGCAATATATCGAGTTAATTTTCTTCCCAGTTTTTGTAGCG TCATTTCTCTACTTTGCATTATGTAACATAAACTTTCTTACGGAAAAAcg gtggtaaaaaagtgcttgaaaaataCCTTGCAATGTGTCCGCAGGGTGGT CTGCAAATTTGTTAAACTGAATCATAATAAAAACAACGACAAAGAAAAGC TTTCAGTCGGGGTACCAAAATaccttcaaatttcaaaaaaagtttgtttt cctTGATGTTTTATAGACCACGTCAAAAAGCACCGAGGGCAGGCACTCCA GGTTTTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAACGACAGG TATTTGAATTATCTTATCCTAAACCCTTTTGGAAAGAGCTGAGTAGAAGC TGTAGCAGGGTTGTTTAACATGGTTTTAAGTGAATAAGTAAGTtttcgac cgcagtcgagggtcacccaaaggctcccttttctctagctgtctacctTT CTTTGGATATCCCTTGATCAGTCACTTTAGCTGATAACCATCAATCAGAA AAGCATCAAGtatcattttgggaatcttaAGTATGACCCAACCCACAACT TTGTGCACGGCAgttggatgctctaccttcatgctacggctTTATGGTAG TTAAATTTCTATACAGGCATTTTAAGATCGACTGTAAATTTTGTGTAAAT TATTATCGAACTGGCAGTAGAACTTAAACTTTGATCTGAAATTgaccttt gaaattttttacccCATCTTTGTTTCTACTATCTTGCCTGTAACTTTAGA CATTTGcccataaatttttttgccaggCCTTAGCAGCGAACTTCTATACT AAAATGACTTCAAACAcattaaacttttgaaaagaattattttaatGATG TCCTAGAAAAGATTTCATGGATACTAAGGTTTGACCCTTACTNGTTCAGA TTACACTGCAACTGTTGTGGGAATGTCAGACAATAAGAAGCCTTCTTCAT CAAAAGCTTATGCTAAGCCATGCAAGCACCCGAGACTTGATACATGTAAC ATCTGTAGAAATAGGTGACTATACTTTATACTGTAcacaaatttcatgtt ttaccTTTGAAAACTACTTGTTACACTCATTGCAATATATCGAGTTAATT TTCTTCCCAGTTTTTGTAGCGTCATTTCTCTACTTTGCATTATGTAACAT AAACTTACTTACGGAATAAcggtggtaaaaaagtgcttgaaaaataCCTT GCAATGTGTCCGCAGGGTGGTCTGCAAATTTGTTAAACTGAATCATAATA AAAACAACGACAAAGAAAAGCTTTCAGTCGGGGTACCAAAATaccttcaa atttcaaaaaatgtttgttttccTTGATGTTTTATAGACCACGTCAAAAA GCACCGAGGGCAGGCACTCCAGGTTTTCGTTCACCAGAGGTATTGATGAG GTATCCTAACCAAACGACAGGTATTTGAATTATCTTATCCTAAACCCTTT TGGAAAGAGCTGAGTAGAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAA GTGAATAAGTAAGTtttcgaccgcagtcgagggtcacccaaaggctccct tttctctagctgtctacctTTCTTTGGATATCCCTTGATCAGTCACTTTA GCTGATAACCATCAATCAGAAAAGCATCAAGtatcattttgggaatctta AGTATGACCCAACCCACAACTTTGTGCACGGCAgttggatgctctacctt catgctacggctTTATGGTAGTTAAATTTCTATACAGGCATTTAAAGATC GACTGTAAATTTTGTGTAAATTATTATCGAACTGGCAGTAGAACTTAAAC TTTGATCTGAAATTgacctttgaaattttttacccCATCTTTGTTTCTAC TATCTTGCCTGTAACTTTAGACATTTGcccataaatttttttgccaggCC TTAGCAGCGAACTTCTATACTAAAATGACTTCAAACAcattaaacttttg aaaagaattattttaatGATGTCCTAGAAAAGATTTCATGGATACTAAGG TTTGACCCTTACTCTCGTggaatttttagtttttgatatGTTTCGTCACT CTGTTTGTAGTGTTTTATGTTATCATCTTTTATTATTTCAGCTGTAGATA TGTGGGCTGCTGGTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCA TTCTTCAAAGCTAAAGACGATATGGAAGCCCTCTCTCAAATCATTGTCCT CTTTGGCAgtaagaaaattaagaaaatggcTGACTCGATTGGTAANAGTT TGTTTTCCTTGATATTTTATAGACCACGTCAAAAAGCACCGAGGGCAGGC ACTCCAGGTTTTCGTTCACCAGAGGTATTGATGAGGTATCCTAACCAAAC GACAGGTATTTGATGAATTATATTATCCTAAACCCTTTTGGAAAGAGCTG AGTAGAAGCTGTAGCAGGGTTGTTTAACATGGTTTTAAGTGAATAAGTAA GTTTTCGACCGCAGTCAAGGGTCACCcaaaggctcccttttctctagctg tctacctTTCTTTGGATATCCCTTGATCAGTCACTTTAGCTGATAACCAT CAATCAGAAAAGCATCAAGtatcattttgggaatcttaAGTATGACCCAA CCCACAACTTTGTGCACGGCAgttggatgctctaccttcatgctacggct TTATGGTAGTTAAATTTCTATACAGGCATTTTAAGATCGACTGTAAATTT TGTGTAAATTATTATCGAACTGGCAGTAGAACTCAAACTTTGATCTGAAA TTgacctttgaaattttttacccCATCTTTGTTTCTACTATCTTGCCTGT AACTTTAGACATTTgcccataattttttttgccaggCCTTAGCAGCGAAC TTCTATACTAAAATGACTTCAAACAcattaaacttttgaaaagaattatt ttaatGATGTCCTAGAAAAGATTTCATGGATACTAAGGTTTGACCCTTAC TCTCGTggaatttttagtttttgatatGTTTCGTCACTCTGTTTGTAGTG TTTTATGTTATCATCTTTGATTATTTCAGCTGTAGATATGTGGGCTGCTG GTGTTGTTTTCTTATGTTTGTTATCAAGACGTTATCCATTCTTCAAAGCT AAAGACGATATGGAAGCCCTCTCTCAAATAATTGTCCTCTTTGGCAgtaa gaaaattaagaaaatggcTGACTCGATTGGTAAGGTCTCCTTCTGTTTCA GGACATCAATCTGCCTGACTCAGAGAAATTAAGCCCTTGCATAGATAAAA GTCTACTTctgactaaattttgaaaaaatgcaatttaGAACGGAAAACCG ACATCTATGACCTATCAATAATTTCCCAATTATCGTTCACTTTCCAAAGA GTAGCGCGAAATCTGATTATCTGTTTTTGATCATCTTCACCAAAGAGAAA TCAATATGGCACGATACTCTCGGGCCACTTAAACAATGTCTTCCAGTATA TCTCATTGAGTGGTTTTCACACTAGCCTTTACTCAACCTTACGTTAAGCA TTTACAGCTAAGAtacttcattttttgaattcgCATGCTATGAATAATTC TATAGATAATAAATTTGTGCTACTTAGAAACTTTTATAGTTTATGGTTTG TGACTTCACTTGATCCAAATCCATGTCAGAGAATGGTCAATAAATTTGGG GAAGCCTTATAAACCATCGTCaatgaaacttttgaatttccctttttctc tACAGGAAAAACTTTCGATTGTTCACCTCCAGTAGAGAATCCGGACACTT TGAAAGTTATCTGTGAAAAATTAGCTCGCAGACAATGCTCTTTACATAGA GACTACAAAGAAGGATCTGCAAAACGAAAACTTAGTGATCCAAGTGCAGC AGCCACTAATAGTCCAAACAAGAAACAAGTAAGCGAGACAATAATTAAAG ACTCTAATCAAAGTAATCGAATCTTAGCCGACATAACATTGGGTAAGAAC CGACTGACTCAATCAGAATCGACCTCAAAATGTACGAGTTCTATTTCAAA GTCTAAAAAATCTAAACAACCAGTTTGTGCTTGTATACCTGAAAGTGCGT ATGATTTGTTGGGGAAACTACTTGAACTGAACCCTGATGATCGAATCAGT GCATCTGATGGTTTAAAACATCCGTTTATCACACATTATTGAGCGTGGTT AGTTATCATTATAAAGAATCATTGCTAATTGGTGCTTGTGCTTTTTACCG ATTTTATGtttagaaaagtttttgaagaCCTGGATTGACTGGATTCGTTC GTTcggtttttttgttttctacatttttttaaCTCCCTCCAAAGAATCAC CCATTTGACTGTCATTAAAATTTTTATGTatggttctttttattattatg gGTTGTTTTTCAACAATAAAGAGTGAATTGCATTCAAACCGTGCAGTCAT ATTTTAtggtttaagaaaaattttgagagcatTGCCGTTGGTAGACTCAA ATATTTGAATAACAAATAATAGacgtttttgatgttttaaagTGTGCCCG GAAAAAAAGTGGTGCACCCATACAAAGGAAAATTTGTATGATTTTTGCAA GACACTACATTAAAAAACATTTATTAAAAATAATGCAGttttagttttgt ttgtttttagcatacttttgtatatattttgaaTAAAGATAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005302XLOC_005302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009479-exon-sc0000095-1491911889:414376..414549TCONS_00009479-exon-sc0000095-1491911889:414376..414549Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:414376..414549TCONS_00009479-exon-sc0000095-1510915933:414376..414549Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:414376..414549TCONS_00009479-exon-sc0000095-1575043694:414376..414549Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:414697..414783TCONS_00009479-exon-sc0000095-1491911889:414697..414783Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:414697..414783TCONS_00009479-exon-sc0000095-1510915933:414697..414783Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:414697..414783TCONS_00009479-exon-sc0000095-1575043694:414697..414783Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:416077..416206TCONS_00009479-exon-sc0000095-1491911889:416077..416206Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:416077..416206TCONS_00009479-exon-sc0000095-1510915933:416077..416206Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:416077..416206TCONS_00009479-exon-sc0000095-1575043694:416077..416206Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:416654..416747TCONS_00009479-exon-sc0000095-1491911889:416654..416747Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:416654..416747TCONS_00009479-exon-sc0000095-1510915933:416654..416747Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:416654..416747TCONS_00009479-exon-sc0000095-1575043694:416654..416747Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:417551..417693TCONS_00009479-exon-sc0000095-1491911889:417551..417693Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:417551..417693TCONS_00009479-exon-sc0000095-1510915933:417551..417693Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:417551..417693TCONS_00009479-exon-sc0000095-1575043694:417551..417693Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:418025..418089TCONS_00009479-exon-sc0000095-1491911889:418025..418089Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:418025..418089TCONS_00009479-exon-sc0000095-1510915933:418025..418089Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:418025..418089TCONS_00009479-exon-sc0000095-1575043694:418025..418089Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:418354..418468TCONS_00009479-exon-sc0000095-1491911889:418354..418468Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:418354..418468TCONS_00009479-exon-sc0000095-1510915933:418354..418468Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:418354..418468TCONS_00009479-exon-sc0000095-1575043694:418354..418468Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:420848..420930TCONS_00009479-exon-sc0000095-1491911889:420848..420930Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:420848..420930TCONS_00009479-exon-sc0000095-1510915933:420848..420930Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:420848..420930TCONS_00009479-exon-sc0000095-1575043694:420848..420930Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:421605..421754TCONS_00009479-exon-sc0000095-1491911889:421605..421754Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:421605..421754TCONS_00009479-exon-sc0000095-1510915933:421605..421754Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:421605..421754TCONS_00009479-exon-sc0000095-1575043694:421605..421754Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1491911889:422281..423220TCONS_00009479-exon-sc0000095-1491911889:422281..423220Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1510915933:422281..423220TCONS_00009479-exon-sc0000095-1510915933:422281..423220Clytia hemisphaericaexon
TCONS_00009479-exon-sc0000095-1575043694:422281..423220TCONS_00009479-exon-sc0000095-1575043694:422281..423220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:414376..423220 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00009479 vs. Swiss-Prot (Human)
Match: CDC7 (Cell division cycle 7-related protein kinase OS=Homo sapiens GN=CDC7 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.960e-44
Identity = 85/204 (41.67%), Postives = 126/204 (61.76%), Query Frame = 3
Query:   75 KMENKKLLSPTRQSLFRACKSPAKQE-DIRIPEPEKKIKLGADLLNAFPEIAENFDIIKKVGEGTFSKVFLA--KMKCDSSKKVAFKHLVPTSSPGRIENELKCLQELGNKNNVLGIKTTLRRNDHIVFVLPYFPYRKFNDVMDRMSANDIQNYMRNLLIALKHVHSYKIIHRDIKPSNFLYCQETDSYALIDFGLAMPVPGTK 677
            +M+     SP R   F+A  S  K E + ++   +K I+    L  A P+++  F I  K+GEGTFS V+LA  +++    +K+A KHL+PTS P RI  EL+CL   G ++NV+G+K   R+NDH+V  +PY  +  F D+++ +S  +++ YM NL  ALK +H + I+HRD+KPSNFLY +    YAL+DFGLA     TK
Sbjct:    8 QMDEPMAFSPQRDR-FQAEGSLKKNEQNFKLAGVKKDIE---KLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 207          

HSP 2 Score: 135.961 bits (341), Expect = 1.135e-33
Identity = 87/235 (37.02%), Postives = 122/235 (51.91%), Query Frame = 3
Query:  789 CNICRNRPRQKAPRAGTPGFRSPEVLMRYPNQTTAVDMWAAGVVFLCLLSRRYPFFKAKDDMEALSQIIVLFGSKKIKKMADSIGKTFDCSPPVENPDTLKVICEKLARRQCSL---------HRDYKEGSAKRKLSDPSAAATNSPNKKQVSETIIKDSNQSNRILADITLGKNRLTQXXXXXXXXXXXXXXXXXXQPVCACIPESAYDLLGKLLELNPDDRISASDGLKHPFI 1466
            C+IC +R +Q APRAGTPGFR+PEVL + PNQTTA+DMW+AGV+FL LLS RYPF+KA DD+ AL+QI+ + GS++  + A + GK+  CS  V   D L+ +CE+L     S          H  ++   +++     S      P +   +     DSN       +         +                        +P+ AYDLL KLL+LNP  RI+A + L HPF 
Sbjct:  360 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHASHQPAISEKTDHKASCLVQTPPGQYSGNSFKKGDSNSCEHCFDEYNTNLEGWNE------------------------VPDEAYDLLDKLLDLNPASRITAEEALLHPFF 569          
The following BLAST results are available for this feature:
BLAST of TCONS_00009479 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC74.960e-4441.67Cell division cycle 7-related protein kinase OS=Ho... [more]
back to top