TCONS_00008568 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008568
Unique NameTCONS_00008568
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1853

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008568 ID=TCONS_00008568|Name=TCONS_00008568|organism=Clytia hemisphaerica|type=transcript|length=1853bp
TTTTCATCAACTCCACCAATGGATCccttgtcaaaatatttatatGGTGA
AGTTTTAAGAATCAATAAAACACACCTATTATTTCCTTTAGACCATTTTT
TACAGTGAggatttgatattttcattttgtgtCATTCCGTCAGCTGATAA
AGTGCAGATCACATCTCCATTTTGGATCGTACCATCCTGATTAGACCGTA
AACAAGATGTCTTCACTCAACAATGACGTATGTGGTCGCTGCGGGAAACG
TGTCTACCACGCAGAAGCAAAGGTGGGTGCACAAAGATCATGGCACAAAG
TTGGTTGTTTCACTTGTAACGTCTGTAAATGCTCATTGACTTCCGTTACA
TTAGCTGAAAATAATGAAGaaaatgaaataTACTGCAAATCGTGCTATGG
ACGTTACCATGGTCCTAAAGGATACGGGTATGGAGCAGGAGCCGGATCTC
TAAGCATGACTGGCTCTGATAAAAGTTACGTTAAATATTCCGGATGTTTA
ACGGCGGCTGGAAAAACTTATATGGGTGGTAACCGATGCCCGCGGTGCAG
TGGTTCCGTTTATCACGCTGAAGAAGTTCTCGGAGCTGGATTAtcGTGGC
ATAAGGGCTGCTTTAACTGCAAAATATGCAACAAGAAATTAGATTCAACG
AATTGTCAAGAAAACGACATGGAAATCTACTGCAAACCATGTTATGGTAA
GCATTTCGGTCCAAAAGGCTATGGATTTGGAGGTGGTGCTGGCGCATTGA
CCAACACTGGAGCTTATGATTAAGAAATCAACAACAATTTTCTGTTCAAA
GAACACTCTGAATACCAAAACAAACACTTTTCATATTCATAAATTTTCAC
AAGATGCTGATCAACGCTTATACTTACAATCTCTCGTTCCCAGAGCCACC
TGCACCACTTTTACACCCCTGTCTCACAGCCCCGGTGGAACTTTTTTCCT
CAGTGGGATAAAAACTCCTATTGAAATCTCAATGGGAATGGAAATTCTAT
TGTTCCAAGGTTAAAAATCCAGTAGGGATGGTTTTGGAGTGCGCAATTTT
TCAACATTGAATTTCAAATGGGGATGAAATCAAAGTCAACCTCCAAGGAG
GGCTGAAATTCCAGGGTATTTTCCCACATAATGAGGCCACTCATATGGTC
TGGCCTACGTCATGTGCCGTGCTTAAGGGTGGGGTTTTTCAGCATCCCAA
AATGCACTGTAAGCGTGTGTTTCTGTGAGATTGCACTGCAAGGTTTAATT
TTAAAACAAATTCAAAATAAGGTTTTTACTTCTCGTTTGTTTGAAAAAGT
TTCTATTGTCTGATAATTACAGCTGACAAGAATAATTTTCTCAGTTTTTC
TTTGAAACAGTAAAACTTCTTCTTTCACGAAGATTGACAGCTGAGAAATA
TAATGCACTATAATAAGGGTTGGGTAAATCAAGAGAAAATGCACTGAAAG
GGTAATATTTCAGCCTTTTGAATTGCGCTGTAAGTGTACGATTTTGAAAA
GCAGATTTTGCGCGGCACATACCGTCATTTCGAAATCGAGTGCCCCCCCG
GGGGTTTATTTAGAAAAATTATCTTTCCAAACGTTTTTTTCCTCTTTTTT
ATTGCTACAGTATTTTGTAAGATTTTGTTGATAGAATTAACTGTTTTTCA
GACCAAATTTTAATTTTTTTAGAGAAATATAAAAATATACATATTTATTT
TACGAATGGATATCATAATCTTGTCGTCCTAATCTTTGAGATTCCTATTA
TTCTTTTTGTCGCATCGGTCTAACTCAAACGGAGGAAAGATGACACTCCG
AATCGAATTAATCTGATAAAAATATCGTAATCTTCATTTACAGTACAGTC
GGG
Run BLAST on NCBI

protein sequence of TCONS_00008568-protein

>TCONS_00008568-protein ID=TCONS_00008568-protein|Name=TCONS_00008568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MSSLNNDVCGRCGKRVYHAEAKVGAQRSWHKVGCFTCNVCKCSLTSVTLA
ENNEENEIYCKSCYGRYHGPKGYGYGAGAGSLSMTGSDKSYVKYSGCLTA
AGKTYMGGNRCPRCSGSVYHAEEVLGAGLSWHKGCFNCKICNKKLDSTNC
QENDMEIYCKPCYGKHFGPKGYGFGGGAGALTNTGAYD
Run BLAST on NCBI

transcript from alignment at sc0000086:751702..756275+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008568 ID=TCONS_00008568|Name=TCONS_00008568|organism=Clytia hemisphaerica|type=transcript|length=4574bp|location=Sequence derived from alignment at sc0000086:751702..756275+ (Clytia hemisphaerica)
TTTTCATCAACTCCACCAATGGATCccttgtcaaaatatttatatGGTGA AGTTTTAAGAATCAATAAAACACACCTATTATTTCCTTTAGACCATTTTT TACAGTGAggatttgatattttcattttgtgtCATTCCGTCAGCTGATAA AGTGCAGATCACATCTCCATTTTGGATCGTACCATCCTGGCAAGTAGTTT TTTCGAAAACCATTTTTTGGATAACTTTGGTCATTAGCCTACTTTGTTGA CGactttataatttatttttgttaatttttggaGTGACACTTTTCGTCAA GTTTATTTTTTCGTCACGTAGGGAGATCATCATTTTCAGAATTATACACA TCTCTGTTTCTGTGGGCAGAGAGACCGACCTGGTTTGTAAAAAGGGTATA tgtaaattatattttaatctgttttttttttcatttgcagATTAGACCGT AAACAAGATGTCTTCACTCAACAATGACGTATGTGGTCGCTGCGGGAAAC GTGTCTACCACGCAGAAGCAAAGGTGGGTGCACAAAGATCATGGCACAAA GTTGGTTGTTTCACTTGTAACGTCTGTAAATGCTCATTGACTTCCGTTAC ATTAGCTGAAAATAATGAAGGTATATTATATGTTGTTTTCATTTAATTCT AGAATGGATCTTTTTCAGAAAGACTGCTGTTGTTGGCATAAAAAGGCCGT TGCTCGAACAAAAAGCCATGgtgaattttttcgatttttgttcATGTGTT TCTTCTACTTTTCGAAATTCGAAATCAACTAAAAGGACCATAAGGAAATA TTTCTAGATAGAAACAATCTTTCCTTCGAACAGAATACAAAAGAACCCTA ATAAAAACAaggggttttgctttgtttttggtaggctagggaatgaaaaa ttaactttggCGATTTCTAGATTATAAGCTGGCGAATTCTTTGCAAGCGC AGTGTATTGATTGGTgtaaatatgtacttgaggcggcGAACCGAGCTTTT CGAATGccaaattgtaatttttttcgtaCCTTGGACCGGCGAAATTCGTC GTTCGCCGGGCCTAAATAAGACCCCTGAGCGACGTCGTGTCTAAGAAAGT TTACCTTCAATTTTGAACCGGAGAATCTTACGTCTGTGAAGTCATAATGT GagtaaaaaatttacttttcagaaaatgaaataTACTGCAAATCGTGCTA TGGACGTTACCATGGTCCTAAAGGATACGGGTATGGAGCAGGAGCCGGAT CTCTAAGCATGACTGGCTCTGATAAAAGTTACGTTAAATATTCCGGATGT TTAACGGCGGCTGGAAAAACTTATATGGGTGGTAACCGATGCCCGCGGTG CAGTGGTTCCGTTTATCACGCTGAAGAAGTTCTCGGAGCTGGATTAGTAA GTACTGTCCATCCACCATTCTATCACCAATTAATTTCCACAGTATTGCGA ATTCATATTTTTATAgtggaatacacgtttttttataagaacatctaaaa agcctttggatgttcataacatgtttttattttcaccattctgtgagtat ttttgtctattttcctgagaaaacggatgtttttgagtccgcaaagcctt aaaatgttcttaacttgttcttaattttttggtcataGAATCCTTATTTT CTttaatagtttgttcttataaaaaaacttttactgtCCATCTATCTATT CTGTTACCACATAAATTTCCACGGTATTATGAATTCATGTTTTTATACAG AAATTATTCAGTCTTCCTCAAAGTGCCCTAGtgttttaaagggacataat aACAGTACTTGccaaatttgtaaacaaactgtatgcagcggatacaaaat caaaacaaatgtcacatgtcaaaataaaaaatcaaaccaaatatggctaa ttttgattgttccattgttttacaagttttggacatttgattttaattgt tctctttaatgacacgtggttcgcgcaatgtttacattttactccATTAC TCGAACACACATAAGAAACTAAAATTTGTATTGCGATTGTAAAGTCGACC AGAAATTGTTTCAAGCTATTAAGAAAACTTGTGAATTATATAGGTTTGGG AaagttcgcgaaagtttattctTGCGAATCTGTAAAACCTCAGtatcgta ataaatatcaaattttcgtcCTAAATTAGCAACAATCAGTCTAAAATTCG AACTATATGCCTTGACTTACTGtgtcttttttctgttttagtcGTGGCAT AAGGGCTGCTTTAACTGCAAAATATGCAACAAGAAATTAGATTCAACGAA TTGTCAAGAAAACGACATGGAAATCTACTGCAAACGTAAGACAGATTTAT TTTACTTATTGAAGCTAATCTTTAAATCTATGAAACTGCGTGCTCATCTT GGGGCCGcgctaaaatgtcgaaaatcgagtaccccctcccctgTACGCAA GTGTACGCAAATGGATGTCAGGGATGTTAAAGTGGCTAATATGTTTATGA GAATCGACTTTAGAGAAACGTTCAATAAATTTTGGAATTACAGTCGGCcc gcaaagccttgaaatgttcttaaaattgtcaccaatacggtttttactga ACCTGTATAttccgtatcccacctcgagaagaccgtgtaaaaattgttct ttgtagaaaaacatgtaatttcTCTATTCTTTATCACATTTACAGCATGT TATGGTAAGCATTTCGGTCCAAAAGGCTATGGATTTGGAGGTGGTGCTGG TGCATTGACCAACACTGGAGCTTATGATTAAGAGATCAACAACAATTTTC TGTTCAAAGAACACTCTGAATACCAAAACAAACACTTTTCATATTCATAA ATTTTCACAAGATGCTGATCAACGCTTATACTTACAATCTCTCGTTCCCA GAGCCACCTGCACCacttttacacccctgtctcacagccccggtggaact tttttcctcagtgggataaaaactcctattgaaatctcaatgggaatgga aattctattgttccaaggttaaaaatccagtagggatggttttggagtgc gcaatttttcaacattgaatttcaaatggggatgaaatcaaagtcaaccT CCAAGgagggctgaaattccagggtattttcccacatAATGAGgccactc atatgatctggcctacgtcatgtgccgtgcttaagggtggggtttttcag catcccaaaatgcactgtaagcgtgtgtttctgtgagattgcactgcaag gtttaattttaaaacaaattcaaaataaggtttttacttctcgtttgttt gaaaaagtttctattgtctgataattacagctgacaagaataattttctc agtttttctttgaaacagtaNAAACATGTAATTTCTCTATTCTTTATCAC ATTTACAGCATGTTATGGTAAGCATTTCGGTCCAAAAGGCTATGGATTTG GAGGTGGTGCTGGCGCATTGACCAACACTGGAGCTTATGATTAAGAAATC AACAACAATTTTCTGTTCAAAGAACACTCTGAATACCAAAACAAACACTT TTCATATTCATAAATTTTCACAAGATGCTGATCAACGCTTATACTTACAA TCTCTCGTTCCCAGAGCCACCTGCACCACTTTTACACCCCTGTCTCACAG CCCCGGTGGAACTTTTTTCCTCAGTGGGATAAAAACTCCTATTGAAATCT CAATGGGAATGGAAATTCTATTGTTCCAAGGTTAAAAATCCAGTAGGGAT GGTTTTGGAGTGCGCAATTTTTCAACATTGAATTTCAAATGGGGATGAAA TCAAAGTCAACCTCCAAGGAGGGCTGAAATTCCAGGGTATTTTCCCACAT AATGAGGCCACTCATATGGTCTGGCCTACGTCATGTGCCGTGCTTAAGGG TGGGGTTTTTCAGCATCCCAAAATGCACTGTAAGCGTGTGTTTCTGTGAG ATTGCACTGCAAGGTTTAATTTTAAAACAAATTCAAAATAAGGTTTTTAC TTCTCGTTTGTTTGAAAAAGTTTCTATTGTCTGATAATTACAGCTGACAA GAATAATTTTCTCAGTTTTTCTTTGAAACAGTAAAACTTCTTCTTTCACG AAGATTGACAGCTGAGAAATATAATGCACTATAATAAGGGTTGGGTAAAT CAAGAGAAAATGCACTGAAAGGGTAATATTTCAGCCTTTTGAATTGCGCT GTAAGTGTACGATTTTGAAAAGCAGATTTTGCGCGGCACATACCGTCATT TCGAAATCGAGTGCCCCCCCGGGGGTTTATTTAGAAAAATTATCTTTCCA AACGTTTTTTTCCTCTTTTTTATTGCTACAGTATTTTGTAAGATTTTGTT GATAGAATTAACTGTTTTTCAGACCAAATTTTAATTTTTTTAGAGAAATA TAAAAATATACATATTTATTTTACGAATGGATATCATAATCTTGTCGTCC TAATCTTTGAGATTCCTATTATTCTTTTTGTCGCATCGGTCTAACTCAAA CGGAGGAAAGATGACACTCCGAATCGAATTAATCTGATAAAAATATCGTA ATCTTCATTTACAGTACAGTCGGG

Coding sequence (CDS) from alignment at sc0000086:751702..756275+

>TCONS_00008568 ID=TCONS_00008568|Name=TCONS_00008568|organism=Clytia hemisphaerica|type=CDS|length=2835bp|location=Sequence derived from alignment at sc0000086:751702..756275+ (Clytia hemisphaerica)
ATGTCTTCACTCAACAATGACGTATGTGGTCGCTGCGGGAAACGTGTCTA
CCACGCAGAAGCAAAGGTGGGTGCACAAAGATCATGGCACAAAGTTGGTT
GTTTCACTTGTAACGTCTGTAAATGCTCATTGACTTCCGTTACATTAGCT
GAAAATAATGAAGaaaatgaaataTACTGCAAATCGTGCTATGGACGTTA
CCATGGTCCTAAAGGATACGGGTATGGAGCAGGAGCCGGATCTCTAAGCA
TGACTGGCTCTGATAAAAGTTACGTTAAATATTCCGGATGTTTAACGGCG
GCTGGAAAAACTTATATGGGTGGTAACCGATGCCCGCGGTGCAGTGGTTC
CGTTTATCACGCTGAAGAAGTTCTCGGAGCTGGATTAtcGTGGCATAAGG
GCTGCTTTAACTGCAAAATATGCAACAAGAAATTAGATTCAACGAATTGT
CAAGAAAACGACATGGAAATCTACTGCAAACCATGTTATGGTAAGCATTT
CGGTCCAAAAGGCTATGGATTTGGAGGTGGTGCTGGCGCATTGACCAACA
CTGGAGCTTATGATTAAATGTCTTCACTCAACAATGACGTATGTGGTCGC
TGCGGGAAACGTGTCTACCACGCAGAAGCAAAGGTGGGTGCACAAAGATC
ATGGCACAAAGTTGGTTGTTTCACTTGTAACGTCTGTAAATGCTCATTGA
CTTCCGTTACATTAGCTGAAAATAATGAAGaaaatgaaataTACTGCAAA
TCGTGCTATGGACGTTACCATGGTCCTAAAGGATACGGGTATGGAGCAGG
AGCCGGATCTCTAAGCATGACTGGCTCTGATAAAAGTTACGTTAAATATT
CCGGATGTTTAACGGCGGCTGGAAAAACTTATATGGGTGGTAACCGATGC
CCGCGGTGCAGTGGTTCCGTTTATCACGCTGAAGAAGTTCTCGGAGCTGG
ATTAtcGTGGCATAAGGGCTGCTTTAACTGCAAAATATGCAACAAGAAAT
TAGATTCAACGAATTGTCAAGAAAACGACATGGAAATCTACTGCAAACCA
TGTTATGGTAAGCATTTCGGTCCAAAAGGCTATGGATTTGGAGGTGGTGC
TGGCGCATTGACCAACACTGGAGCTTATGATTAAATGTCTTCACTCAACA
ATGACGTATGTGGTCGCTGCGGGAAACGTGTCTACCACGCAGAAGCAAAG
GTGGGTGCACAAAGATCATGGCACAAAGTTGGTTGTTTCACTTGTAACGT
CTGTAAATGCTCATTGACTTCCGTTACATTAGCTGAAAATAATGAAGaaa
atgaaataTACTGCAAATCGTGCTATGGACGTTACCATGGTCCTAAAGGA
TACGGGTATGGAGCAGGAGCCGGATCTCTAAGCATGACTGGCTCTGATAA
AAGTTACGTTAAATATTCCGGATGTTTAACGGCGGCTGGAAAAACTTATA
TGGGTGGTAACCGATGCCCGCGGTGCAGTGGTTCCGTTTATCACGCTGAA
GAAGTTCTCGGAGCTGGATTAtcGTGGCATAAGGGCTGCTTTAACTGCAA
AATATGCAACAAGAAATTAGATTCAACGAATTGTCAAGAAAACGACATGG
AAATCTACTGCAAACCATGTTATGGTAAGCATTTCGGTCCAAAAGGCTAT
GGATTTGGAGGTGGTGCTGGCGCATTGACCAACACTGGAGCTTATGATTA
AATGTCTTCACTCAACAATGACGTATGTGGTCGCTGCGGGAAACGTGTCT
ACCACGCAGAAGCAAAGGTGGGTGCACAAAGATCATGGCACAAAGTTGGT
TGTTTCACTTGTAACGTCTGTAAATGCTCATTGACTTCCGTTACATTAGC
TGAAAATAATGAAGaaaatgaaataTACTGCAAATCGTGCTATGGACGTT
ACCATGGTCCTAAAGGATACGGGTATGGAGCAGGAGCCGGATCTCTAAGC
ATGACTGGCTCTGATAAAAGTTACGTTAAATATTCCGGATGTTTAACGGC
GGCTGGAAAAACTTATATGGGTGGTAACCGATGCCCGCGGTGCAGTGGTT
CCGTTTATCACGCTGAAGAAGTTCTCGGAGCTGGATTAtcGTGGCATAAG
GGCTGCTTTAACTGCAAAATATGCAACAAGAAATTAGATTCAACGAATTG
TCAAGAAAACGACATGGAAATCTACTGCAAACCATGTTATGGTAAGCATT
TCGGTCCAAAAGGCTATGGATTTGGAGGTGGTGCTGGCGCATTGACCAAC
ACTGGAGCTTATGATTAAATGTCTTCACTCAACAATGACGTATGTGGTCG
CTGCGGGAAACGTGTCTACCACGCAGAAGCAAAGGTGGGTGCACAAAGAT
CATGGCACAAAGTTGGTTGTTTCACTTGTAACGTCTGTAAATGCTCATTG
ACTTCCGTTACATTAGCTGAAAATAATGAAGaaaatgaaataTACTGCAA
ATCGTGCTATGGACGTTACCATGGTCCTAAAGGATACGGGTATGGAGCAG
GAGCCGGATCTCTAAGCATGACTGGCTCTGATAAAAGTTACGTTAAATAT
TCCGGATGTTTAACGGCGGCTGGAAAAACTTATATGGGTGGTAACCGATG
CCCGCGGTGCAGTGGTTCCGTTTATCACGCTGAAGAAGTTCTCGGAGCTG
GATTAtcGTGGCATAAGGGCTGCTTTAACTGCAAAATATGCAACAAGAAA
TTAGATTCAACGAATTGTCAAGAAAACGACATGGAAATCTACTGCAAACC
ATGTTATGGTAAGCATTTCGGTCCAAAAGGCTATGGATTTGGAGGTGGTG
CTGGCGCATTGACCAACACTGGAGCTTATGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004796XLOC_004796Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008568-exon-sc0000086-1491911889:751702..751890TCONS_00008568-exon-sc0000086-1491911889:751702..751890Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:751702..751890TCONS_00008568-exon-sc0000086-1510915933:751702..751890Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:751702..751890TCONS_00008568-exon-sc0000086-1575043694:751702..751890Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1491911889:752142..752321TCONS_00008568-exon-sc0000086-1491911889:752142..752321Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:752142..752321TCONS_00008568-exon-sc0000086-1510915933:752142..752321Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:752142..752321TCONS_00008568-exon-sc0000086-1575043694:752142..752321Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1491911889:752874..753097TCONS_00008568-exon-sc0000086-1491911889:752874..753097Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:752874..753097TCONS_00008568-exon-sc0000086-1510915933:752874..753097Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:752874..753097TCONS_00008568-exon-sc0000086-1575043694:752874..753097Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1491911889:753943..754036TCONS_00008568-exon-sc0000086-1491911889:753943..754036Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:753943..754036TCONS_00008568-exon-sc0000086-1510915933:753943..754036Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:753943..754036TCONS_00008568-exon-sc0000086-1575043694:753943..754036Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1491911889:754397..754426TCONS_00008568-exon-sc0000086-1491911889:754397..754426Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:754397..754426TCONS_00008568-exon-sc0000086-1510915933:754397..754426Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:754397..754426TCONS_00008568-exon-sc0000086-1575043694:754397..754426Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1491911889:755140..756275TCONS_00008568-exon-sc0000086-1491911889:755140..756275Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1510915933:755140..756275TCONS_00008568-exon-sc0000086-1510915933:755140..756275Clytia hemisphaericaexon
TCONS_00008568-exon-sc0000086-1575043694:755140..756275TCONS_00008568-exon-sc0000086-1575043694:755140..756275Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008568-proteinTCONS_00008568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:751702..756275 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.138807 0.124635 0.0902117 0.219406 0.151631 0.0300979 1.10354 1.14595 0.771157 0.684272 0.713516 0.805484 57.0552 52.3798 0.963705 1.24805 1.52986 1.15284 68.9736 58.5799 3.18472 3.21857 0.473539 0.504719 0.223363 0.25626 1.13966 1.69122 1.32851 1.07995
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
Blast
BLAST of TCONS_00008568 vs. Swiss-Prot (Human)
Match: CSRP2 (Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 7.876e-29
Identity = 76/164 (46.34%), Postives = 99/164 (60.37%), Query Frame = 3
Query:  231 CGRCGKRVYHAEAKVGAQRSWHKVGCFTCNVCKCSLTSVTLAENNEENEIYCKSCYGRYHGPKXXXXXXXXXSLSMTGSDKSYVKYSGC----------LTAAGKTYMGGNRCPRCSGSVYHAEEVLGAGLSWHKGCFNCKICNKKLDSTNCQENDMEIYCKPC 692
            CG CG+ VYHAE      RS+H+  CF C VC+ +L S T+A ++EE  IYCKSCYG+ +GPKGYGYG GAG+L+M   ++  +K               +   + Y G  +C RC  SVY AE+++GAG  WHK CF C  C K L+ST   E + EIYCK C
Sbjct:   10 CGACGRTVYHAEEVQCDGRSFHRC-CFLCMVCRKNLDSTTVAIHDEE--IYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKYGGAEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGC 170          
The following BLAST results are available for this feature:
BLAST of TCONS_00008568 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSRP27.876e-2946.34Cysteine and glycine-rich protein 2 OS=Homo sapien... [more]
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