TCONS_00008388 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008388
Unique Name	TCONS_00008388
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3057

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000085:119259..137078+

transcript sequence

>TCONS_00008388 ID=TCONS_00008388|Name=TCONS_00008388|organism=Clytia hemisphaerica|type=transcript|length=3057bp
TTTCAAGATTGATGAAATGAAATACAAACAAATATatggaaagtaaaaaa
aaaaaagaaatcttttcgatcaaatAATCTACCCTTCTTAATTTTCTGAT
CACAAAAAGGATCAGGTCATGATGTCTGTCATCTTTGCATAACATTTCGa
caaaaattcatttctttgtGACGAGGGAAACATATCTGGCATTTGAGGGA
GCTGGCTGACGAGAAAGATTACTCCAAGGAACGTTCTTACGACGACTGTA
GTTTGGTAATTCAGAAGAAATTTCTTTGGGATTTTCTGCTTTTGAATACT
CAGAATGCCGCTTTCAATATCTTGCGAGTCGTCCACTAATCTCCGCAAAA
GTCAACTGTTTGTcggacaaaaaaacaacaaaacaacgACGTCATCAAAA
GTGTCGATTCGACCCATCGCAAGTTTGAATGGAAGAGATTCTTTGAAGAA
TAACTTACCTGTCGataaaagaGTAAGCAAAATGACGACCCTGGAAGAAA
TGGAAAAAcgtgaaaaagaaatcaaagtcaTGCTAGAGAACGCAGAAAGT
TTAGAAGAAAGAAAACAACTGCGAACAGAGCTACGAGAATTACGGCGTAA
AATCTTCGAAGCTCCTACAACTACGACCACATCAATTTCAGTTACGACAA
AAAAGGAACCTGAAGTTTCGAATACTAAAGTGAATATCGAGAAAGAAAAC
GCGAAAAATCTCGATTTGAACGGAAACAAGAGGATCAGTGTGACGTTGAA
TACATCTAAACCGACACCTATCACCATAGAAACCAAAATCAAAGCGGACA
CCACTTCGGAACAAGAAACAGAAAAGCCACGAACAACTTCATCAGAGTCA
TCCACTACTTCCAGCAACAACATGAGCAGCAGCGTTGCGCGACGATCTCG
ACTTTTCCAAACAGACGATAACAACAATGCATCAAAAACAGAATCTTCTG
CTCCACAAGCAAATGGAATCAAACTCAAAATCAACGATGGTGGTGATAAT
ACGCCCACGCTCCGTACGCGCGACCCGGCCGATCGGGCCGCACGCAGAGC
TAGACGCGCACAACAGCAACGTGAGATGAGTGTTGACCAAGGGAATACTG
AAACGAACAAAGAAGAAGCGCCAAAACCGACAGAAACGGTCATCGTTGAA
GCGccaaaagaagagaaaaaggaAGAACCAAAGACGACAACAGAACAGAG
GAAATCGACGAGCACTCTTTCCGTTGGAGGAACGGNAAACAAAGAAGAAG
CGCTAAAACCGACAGAAACGGTCATCGTTGAAGCGccaaaagaagagaaa
aaggaAGAACCAAAGACGACAACAGAACAGAGGAAATCGACGAGCACTCT
TTCCGTTGGAGGAACGGGTACAAAGAACACGGGGTCAGCAGGATTAAGAA
GAACTGCAACTTGGGGTGCTAAAGATAAAAATGGTGCAGCAAATAATATC
GGGAAAGCGTTAAACAAATTCGGACCACAGAGTAATTCTTCATCAACGAC
AAAACGACCCGTTTCCTCGTACGGTGGTGGTGGCAGATTTGCAAATTTGA
GCTCTGACCCTGTTCCGCCACCACAACCCAAACCAGAACCACCAAAGCAG
AACGGAACGCCTTCTTTTGGTAACCCAACTGGTACCCAATCAGCGGCCGA
TCGAATGGCGTATTTCAGACAAGCAGCAGAAGCAGAGAAGAAGAAGGTGG
AAGAAAAGAAGGCGGCGGCAGAAGCGCGACAAAAGCAACAAGAAATGTTG
AACGCTGTGATGAATGGAGAGGTCTCCATGGGTAGCAACAAGAaagagga
agaagaaaaaacaccAGCTACACGTAAAGAGAGTAATGAAGGGGGCGCCA
AGAAAGGAGGATCTTCTGCGCCATGTAAGAGGCGCGAGAAAAAGAAGGTT
ACCCGTCGAACGATGTCCATCGGAAGCATCGTCCTCGATTGGGTGCAAGA
AATGATCAAAGATTATCCAGTGGAAGTGACCAACTTCTCCTCCAGTTGGA
ACAATGGCATGGCTTTCTGCGCACTCATTCACGCTTTCAATAAAGATGAG
TTTGATTTTAGTGAGCTCAAACCGGAAAACAAACGCTACAATTTTGATTT
GGCATTCGACACAGGATATAAAGTGAAGAAGATTCCAAAGTTGTTGGACA
CAGATGATATGGTTGCTATGGCTCGTCCTGAACCCAGGAGTGTTCAAACC
TATATTCAATGGATTTGGAGTGTTTACGGACCAACCTCTGGGTACGGGCC
TACCCCACAAGAAgtacaaaaatgaaaacataaaaaGTCTTTGTTAGAAA
ATACTTTGGAAAAGATGATGGATGGCAAAATTATCcacaaatttcagaaa
aaaatagagAGACTTGTAGTGGAATTGACGGGTGCGACTGAATTTCCCAG
AAGTTTTGATGGCTTGAGACCTCTACAATACAAACTGAATACATGATAGA
TGAAACCTCATAAGTGAGCAAAGCTGAATAGACGacttataaattatttt
tcttcttcgatTTCTTTCTGATACAATTTTTCTCACATTTGTCTGGTTTG
AAAAGCTTTTGATTTATACgagaaagaaatttatttctAAGTTAAAGAGT
TTCGGTAAAACTAATTTGTTTATGAAGCACTGAAATCATACGAAGAACCA
ACTTTAACTTTTTCGTgtatataattattttatccTCGATATTTCGTTGA
TGCTTTTTGTATATACATTCTTCTtctaaatttattgtaaaattaTTGAA
TAACACTTTCCTTTCCCTTCTTattaattttcccaaaattacaataattt
tagttttatgaatatacttaaaaaaaaagttttatacgATTTTATATTCG
ACAAAATTCTTATGTTGACTATGTTTATTTTGACTAATAGAAACGGAATA
GAAAATTATTTAAGTTTGAGGAGACCGGATTTTTCTCATCTAAAAATTGC
TTACAAAAGGGCTGACCCTTTTTCAATTACCCCTTCCCCCTTTATAACCT
TCAGGTGACACCTtgctgtcagaaatgtcatcattcTCAAAGTGTGGata
tttttag

Run BLAST on NCBI

transcript from alignment at sc0000085:119259..137078+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008388 ID=TCONS_00008388|Name=TCONS_00008388|organism=Clytia hemisphaerica|type=transcript|length=17820bp|location=Sequence derived from alignment at sc0000085:119259..137078+ (Clytia hemisphaerica)
TTTCAAGATTGATGAAATGAAATACAAACAAATATatggaaagtaaaaaa
aaaaaagaaatcttttcgatcaaatAATCTACCCTTCTTAATTTTCTGAT
CACAAAAAGGATCAGGTCATGATGTCTGTCATCTTTGCATAACATTTCGa
caaaaattcatttctttgtGACGAGGGAAACATATCTGGCATTTGAGGGA
GCTGGCTGACGAGAAAGATTACTCCAAGGAACGTTCTTACGACGACTGTA
GTTTGGTAATTCAGAAGAAATTTCTTTGGGATTTTCTGCTTTTGAATACT
CAGAATGCCGCTTTCAATATCTTGCGAGTCGTCCACTAATCTCCGCAAAA
GTCAACTGTTTGTcggacaaaaaaacaacaaaacaacgACGTCATCAAAA
GTGTCGATTCGACCCATCGCAAGTTTGAATGGAAGAGATTCTTTGAAGAA
TAACTTACCTGTCGGTACGCATTGCTTTTCATTGTTCTTATGTCCATGTT
GTGCATCCTCTTTTATCCGATTCTTGTAAACTGTTTTCTGATTATGAGAA
ATTCCCTTCAAAACTTCCCTCGTTCATACAGACGAATGTTTTACTTCTTT
TTATGTGCTTTGATCATCGCAAACAATTTTGTGCAGAATGCTTGGCTTCC
AAGAACAGTACCTCTTACAGGCAAACTTATAGAAATTTTATCTCATAGAA
AAGGGATTTTTCTACTGCTTTTACCTGAAAGAGACTGTTTTTCCCTAAGT
TGAGAGGGGTTATAAACTCATGGTCTTGGACCAGCTGTTTCGGTGAGGTT
ATATTGGTAATTGAGATTAAGCATTTTGCTGTCCTCATCTTTCATTCAAA
CCATGTGTAGCGGAATGCGCAAACGAACAGATCTTGTTACAAACCTTTTG
ACATTAATCGAAAAACATGAACaacttttaattaaaaattggataatCTA
AACTCACATATTTGCTGTTGAAAGTTTAATATGTTCCTTCTAAACGTCAT
TTGATAGAGTAAATGTGAAAAAGAATATGGCCCCGGATAATGTTCCTCGT
CTACTTTTCCAGGGACGAGCATTTAAGCATTATGAGCAGCAGCATTAATA
ATGGAGCAATGTTTAATTAAAGCACTGAGTAACAAGGNCAGCAGCATTAA
TAATGGAGCAATATTTAATTAAAGCACTGAGTAACAAGGGAGCTTTTTAA
TTAAGGGCAACATGAGTCCACCGAAGCAGACAATTAACTCAAAACCGCCA
TTCATTCCACCCTTTTGATTTCCCTTTAAACGAATACCATCACCATGGGC
GACACAAATTGAATTTTTAGCCTTTTTCAACTATAGGATACATAATTTTC
TTGATGCGAGAAATGGAAAGATTAATAGAGTAATCGCTTATATCGATTCT
TTGAGCCAATTTGTCAAGCATTTTTCTTGTatttccaaaacaaaaaaaag
agagGGCTAAAGGCTTTTATGCTGTAATGATTCCATAGAAAGAATGCAGt
cgattttctctttttctccaGCGATACCCATCACTTGATTGTTGTTTTTC
CTAATTTGATTAAAGACTATTCATTTAGTGTGCTTGTGCTTGAAAGTTCG
GATGTAGTTTGTGTGTGCTGTATACTCCCTGCATCATTTGTTCAGGGTTT
AGTAATGCGAACTTAACGCATATTATTTGCataaaaatctatttcaaaac
attcagtTTGTTTGCTTATACAGGATAGTTTGATGCTTTTAAATTGCAAA
GAGAATTGATATTTCTAGAACGACATTCAACCACTATTCGATTGGATATT
GGTGTCTGNGgcatatgattctggctgggttgttcttaaatttatatgta
tttttcagccttaaatgtcaatatcaattaaaatggaaacatgtacttct
cagtaatttcggaaatctgaggttcagattcttcttaatttgNGCTCAAG
AATAAGATTGCTCGGGGAAGAATAGAGAGAGTTAATAAAAAGAGAAGAGC
AAGATTCTCAACCCTACAAGAGAATGGGTGCTCTATCGTCTCAGATTAAT
AACCTTTTGTAGGGATTGttattgccaccggaggaagcctaaagcttctg
aggatggcattcatagcttcacgcataaggaagttgggcaatcatctcat
aattttgcgcgcgtttttcagtatNcactcccttgacacatttgttagca
tttgaaagaattttgtctcagatgagaggtcactcttaacaaaaattact
gtaggactaagatcattccttttgaacgcaaattcaactctatgtgtttc
gttttgctgcggtggcaccttaatgaaagttatggctagtgtaatatatt
gaattttgctttgttttgtatttttcagataaaagaGTAAGCAAAATGAC
GACCCTGGAAGAAATGGAAAAAcgtgaaaaagaaatcaaagtcaTGGTAT
GTTTAACTTTTTACGGAGAGTCTAActacaatacacgtttttttttataa
gaacgtaaAAAAtgttcgaagccttcggatgttcttagttttttggattt
gaagcctaaagatgttcttaaaatgttcttattttcagcattttttgagc
attttgatgtaatttcttaagaaattgcatgtttttaagtctccaaagcc
ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatatagtttgtt
cttataaaaaaaacgtgtacacctCCTTCTCACGTAACCGGTACGACTTT
TTGAAAGTGTAGGGGTAAAGATATCGTATCCGTCGAGATTCGAATTCATA
ACCGTGTCATTCACGCATGTTTGCTCTACTATTTGCTACGAGAAATCGAT
TGCCACTTTATAAAACTTGAAAGGAATTTTTGTCTCCTGACTAAACTTAA
TAACCGATATTTTCCTAATGATTGgcacccagccggcacacaacgtcaaa
ataACGTCCACCtgacgttcacaacgtccaaataacgttacttgaacgtt
gaaacaacgttgtgtaccagctgggcaAGTGTCTCCCATTCTAAATTCTG
AATTTCGACACAGCATTTTGGGGTGAAGGATAATGTAGGGTTATATTTAC
ACTAAGCAACAAACTATTGTCGTCTTTATATGTTGTTTACTCTGTGATAA
TTTGGGCAAACAGCAACAAAGCTTTTAATGGGGTATCTTTCTTGATCCAT
GGTTTCTAAACATAAAGATGATGTATTAAGTCAACATTCTGCAGGGTTGG
AATTTATTGAAGTAGttggtgtttttgttttatgacaaaagatttttata
acCAAGACTTCACTATCTAAGCGAAATCTAAGGATTCGAATTATAATTGA
TGAACgcatttaatttttgttttgacctTAAAAAAAGACCACCTGCtagt
ttattttcaatttagaCGAtctataaataaaacaaaaatatgccTAAGGC
GTTTTAAACAACCAATGTCTATTAAACGGAACACATACTTAGCTAGATGC
TCTCACTTTCTAGTGGCCAAAAGACTTGTtaattttcttgactttttcaA
TTATGTTATCATCTGACAATGATGTCTAGCATACAAGCTTAAATAAACTA
AAGCTGGGGGTGCTCCTTTGCATTATCTTTGTCGCGGCTTTGATACCCCT
CACCcacaaaacacccctgtctcattgacAGATGGAGATGAAGGAACTAA
TTGCCGTTGGGGTTCTAATGTTTACAGGACAAATGTTCACTTAAACCACT
AAAGTTTTATTCTCACTGGAAATGAGACTCAGTGGATTTTCTCTAGGGGA
ATGAAATTTCGGGGTTTTATTTCTCACTGGGTGATATTTTGAGCTATTGT
GTTGCAATACAGGTGTctctgacacaggggtgtagcAATCAAAGGTACTC
CTTGAACAACAAGAAAACAGCTGTAATGAGATAATATTGCTTCTAAACAA
AGATCGAGTCCCTACAAATCATGCCGAGgtataataaaaagttaaacATC
ATTGGTAAGATTATTCGGCGTCAGTTGCGTGACTTTtctgaattcatgat
atgcaccattgcaatgtcttctgacattacatcatgaaccaaacagctga
ttggttgtaagtgacgtaaaatcagtcattCCGTCACTtgtaaccaatca
gctgttgggtccgttgaagacattacaatggtgcatatcatgaataaagc
aTGCTACTTCCTCAACGAACTGTGTCAATCAGGAAATTTCTACAAATCTC
CAACGGTCAGCATaccataaaaaaagaaaaaaaagaaacttttaagATAA
TAGGCATAAAATGCCCTCCTACAAGCTAGAATAATGAATGTATAACATTT
TTGCTCGAGCAAATAAGTTTGAAAAGAAACGCTGTTAGTTCGCTGTTGTC
TTTTATGAGCAGGCTTTGCAATGGAACTTTATTTTCTGGCTGTTTGTTAT
TTTCTTGCTTCAGTATGTGGCTTGACGTTGTTCAAGAAGTTTTTTCTCAT
TCTCGTTAAATTTCAACCTTTCACTGGAATGGTTTGAATCTGGTTTTAGG
AGTAAGAATTACAGTGAAGAATTAGGCTCATATCCTGCTTCGAAGGGTCA
ATATAAGATAGCAGTTTAAATCGTCTACTTTGACCTAGTTTGGGTGACGC
TTCGTTGTGTAGGTCTTTCCTAGCTAAATCATAGTAGGGCAGTTATACTA
TTTATTTGTCAGTTTGTCAGAGAGATTAATTCTTATCATACACTCAGTAA
GATTGATTCGAATTTGAATTAACTATATCCCTTAGCAACGCCCAGATTTC
ATCAAATGCAAGATTAAAACAATATAATGAAATTCTAGATTTGAGAGGAC
AGGGTCAACAGGGCATTGGCTTCTTAAGCGTTTGCGTAGATACCTTTTTT
TGTCAGAATGAAGAATTTCAACGCATACATCCAGGTATATGTCGACAAGA
GGATTTATTGTAGTTTAATGGAATTGACAAATATATCATGATCACAAACT
TCATTAAAATTAACGAGATTTTAATCATTGCGGTCTTCATTGCTATTACC
CTTTTAAATCTCTCCCTTCCTTTCACAACAAACAAACGGAACGTAGACAA
GAAAAGTAAGAAGTACAGATTTGAAGTTTGACTTTGACAGATGACACGat
tcaaaatattgaagaaaacTTCTATTTGAAACTAAAACAAGTTTGTATTT
TATGGCGGTTGTCAAAATCATCAGtggtttttgaaaattatatatcAGAG
ATGGGAGAGATATTGTTGGACTAGTGGAGCCAGAAACTCCCATATTGTTT
ACGTCGTTAAAATTTATCTATCTCCTTTCTTTTGATGTGATTTATTATTT
TATGGTGCTTGAAATATAGAGTAGCTGAAAGGAGTGGGAATGGGAGACTG
CGTGAACCAGTGGCTAGAGTTTCTAATTTCTTGAATATCCCTGTTTcaac
agggatatgttatagcggagctggataacgcacatttgaaaaagccttgt
tctatctctgtccctgacattaaaatctGATattaaattaaactttttta
attacaaattcgtgaaatttggatttctttttagccaatgattctgctgc
tgcatttattgttcacgattaaaaactattaattatcataagggtctgta
aaacattggtgaatgacaatttaaaaaaatgaaaaacattgttttcatta
gtaaagttactAGGTCACAGTAAACCACACCGAAACGACCTTCCATCACG
CAATcgcgcatcacgctcgcgaaagagcgcgcgcacattattaacgctta
CATGTCATGTACCAGAtaaacatgtcatctccagtacattttagataatt
cattgaaaacagattacaatatagtcatttttcatgtctcgattattcaa
ttccatatataagacattcagggaaaaaaagagaaacacctgggtctACC
TGGTCACCTGTAATATAGttgaaaaaaccgaaagtaaatggtagacaaag
taatgagccaaggcaaaacgagattagcgtaccactatgaaagaatcCGC
CTCCGGTGGTcgataagaaatttcttctggaagaccgcggggtgcctcgc
tttctaactgatattttcagatagcaagtcggtatgtctgattatggaaa
aaatttcaagtcaattgaaacaatatttgtcaaaatatttacatccgaaa
tttttaaagagaaatcatgaaagcttctcaaattcataacacacgctgat
aaaattagatatcatttacaaagaagctttcggggtatcttttgcaaata
ttattttgatgaaaagcgggaacatcgtagcaaaatatatgcaaacgtac
tgcatgaatactttgtctgcttcatttttctNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNaatactttgtctgcttcatttttcttataaaaacaga
acactctaggggacagagatggatttctattatgaacagtttacaataga
aaagacaaaggagcGATCcactaaggaattctcgtccttcatccagctcc
gctataacatatacCTGGTTTCAACcagttttaatattttcttcaattta
aAACTGTTTGACAGTTACAACCAATTGCAATTAAACTTTCTTAGTTGATC
GGAGTTGTGGCTTGTGGTGAGAGTATCACTACGTCCAAACTTTTAAATCC
GTGATATGATGACCAAtttcaatctttaaaagaaagacATCAATGTCAGT
AGGACCTCAACAGACATATAAACATTCAATAATGGTTAAAAATTGATCAT
CAAATTTTCTCAGCTTGTTTTACTAAGATTCGTGCTTGATTTGTTGagta
gaaaatataaaatttatatGTTTATATTTTGCGAGTTTTTATGGTTTTCT
CCAGTCTGATGATTAGGAAACTACAAATTAACGGATTCCATCAGTCGATT
CGCTCATTAAAACTGTATGAAGCAGTTCagtgctgtttttttttatcctC
TCGAGGATTTTTGGGATTTCAAGGAGTCGTCACTGGTCATTGTGatatta
tttttagaatttacaGTATGGTATTCTTCATAAAGTGCAAAAGCGTTTCA
AATTTTGGAATACTTTGGGTAGCCTAGTTAGGTTCTGGGgaaattttgct
tttatttttatacattttcatGGGACATAAACTGGCTAGATTTCCTGGGG
TAAAAATgtacaatgaaaattttttagcTATAACAGGAATATGTTTCAAG
CCACGTATATAGCATACGATTGTTGTGGTTaaatatttctattgtttttt
cgATGACAATCACTTTTCAAATTAAATGGACCAATAACTTGATTCACTTA
CGGTCTTTTTAAAGTTGATGAGATCCCGTCATTTTCTTAAGAGTTTAATC
CGTTGCTGATGACCTTTGTTTCTTTTCAGCTCAATTAATTTGCattcaaa
atcttttaatttgtaAACTCATTAACTCGGGATTAAGGcctgctcagttt
gaagagacTTTTCTTTCATCAAAATTGCGTAAAATGTTAATAAAGGCCAA
TCTCTAATTATCGAATGTTTGTAAACAAGGTTTACCAAAATGGGTCTTTG
AAATGCTGGTCGCCTGGCCTTGGCAAATAAGcatgaaaagggtcaaaatt
taattttattacgTATTTAGAATTGGtgctcggaaaatttttttttattt
ggaacGTCTTTGGAACGTCTTTAAAATGTGTAATTAGGATATTTGTGGGT
TGTTGGCGAATTCAATTCCTATAAAATTGGAGGCTTCATTCTCAAAGATG
AAACGAGAACCTGAGTTTGAAAGCCCTGTGACGACCGCATAGTTTCATAC
AAAATGACTCAGTGATCCTACAGATACATATAAAGTATTACAACAAAGCG
ATATTTTGACAATATAGAGAATCTCACCCTAACAACAAGTGTTTCTATGT
GTTTACAGTTGCGGTAACGTTAAATTTCCGGCTATTTTCACACACATGGC
TCTCCATCTTTAACTCGCTTGACATGTCAGCTCTACATCAATGTACATCT
TACTCTACGAAGGAGATATTTTTTCTGAGGAAGCTATTACATGCCAACAa
cctttcaaaaattgaaataattttgtctttttgacaAATTCCAATCAATA
TAGATGACAAACTGTTccaaagcaaaatatttttgatggaGTTGGTTGTA
TTGCAATAGTATGTCAGTGTATGGAAAATTTGCTGGCATCAATTTTTCTA
AAGCAGTTTTTGTTTCACTTTGATCTTCTTTCCATCTAAAATTGTTCTGT
TTCACTTTCCATCCATCCTTATGAAAACATAATTTATGAATTACCATTGC
CATTGCCATTGCCATTGCCATAAATGCgtagattttgtattttttccaaT
TTGCTTAATGGCTACAAATTTGGGGGATGTCTTAAGATCACTTAAAACAT
TATTAAATCACGGTCgtcgaaaatcaaaaaatgctttACTCTCAATCTCT
CAACTGTGAAAAATGAATGCTCACTTGATATGACATGATGATTGGCTTTT
CCAGTTAAGAATTTTGATGGTGGAGAAATAATCTCGTCATCGATCCTGCG
CTAAAGGGATATGGCAAGTGTGATGGTGGACATGGTTGTTCGGCcaaaac
atccaaaactttgTTGGCTTTGGgttgaaaaagaaagtgaaagcgaCTCT
gcccagacggcacacaacgtcaaaacaacgtccatgtgacattcataacg
tccaaataacgttatttgaacgttaaaacaacgttgtgtgccagctgggt
gtgGTAATGTTTATCTTTATGATTGACGTTTCTTAATCGTCTTGTTTTAG
CCAGTTACCGCACGGAAGTGgaatattttcttttattgGCTTAGAAACTT
ATTTGGGCTAAAAGGTTGATACAAtgctttaaattttttaattagtttGA
TTAGATAACTAGCAGAAAGATTTCGTTGttggaaaatattgaaaagagcC
TATATTTTCGAAGAAAGCTTTTGCTAGGACCTTGGGAAGGTGTAATAGAA
CCGTCTTAAAGTTTTCTTCAATCTGGCCACTGAAGGGGCCGTTCGCCCAA
AAAGATTTAACGAAAGAATGAATCTAATTTCAAATGAATTTATTCTCATT
TTAATCAGGAAAGCTGGTAGTGTGTGCCTTCAATATTCAACACGGCTTGC
CATTTTATTGGACCGCTGTGAAAAGGATGTAGCCTTCGCAGTTATTTACT
AGTTTTTAATTCAAACCCTTTTCAGGAGCAATCCTTTCCATTTTCGGCCA
CATAATAACTGATTTAATTTTgatgactttttaatttttttgaaagtttc
agtTTTGTTGTATTGAAGGTCATCGACAAATTTTGTCACTGGTGGTTTAA
ACTATTATATCAAAgcgttgaatttcaatattttgcacTTCAGGGACGCC
ATCTTTATTATAAAGAAACTTATAAAcacttaagaatatttttctatCAT
AACATTAAATTGTATGTTATCAtcacatttttgaaatcttctcaAAAAGC
TTCCTGGTCATTAAGAAAACCGTCTAGCGATTGGAAAGGTCCTTTTCTTC
AATTGGAAAGGTCTTTTAAAACCTAACCATcctctttttgataaaaatct
ccAGACAAATTTAAACCAAattcttttagtaaaaaaagaCCTAGAATTTA
TTTCGAAAAGTATTTTGATTTGTCATCTTTTAAACGACTGACAGGCGTTC
gtttacaaatttcaaaaaatgtttttaaggtGGTTAGCGACTTAGTTTTT
AgttggattttgataaaaaattttagttttatacGTATTTGTTCTTTTTG
GGAAAGAAGTTGTGGTGTCCTTGTAGAAGCGAGCTaatgcaaaagtgttt
tcagtCGCATTTAGAATGACTATTTAGTGGCAGTTTATGTGGTTTAATTC
TGGTAAATTTGTGTTTAATTGTTTTGATTCGTGGCgtattaaatattttt
acagCGATGACTAGAAAATTTATAAATACATGGCCAATTATAACATAGCA
TATCCTACTACTAAAGAAAAAATGCTTTTGGTTTAAGCTTCGATAACAAA
AGAGGACCAAGCGTGTGATTAAGGATGCCTTTATAGCCTTGCTTGCAAGT
AAAgttaatattttcaatattttaagaaGTTGATTTGGTCTCAGATTAAG
GAGATCAGGTAATTGAACATTAAACTTAAAATGTtgagtttaaaaacaaa
aatatgcgAGGGGGGATCCTGTCAATGGATTATGAGCCAAAATATATGTA
AATGAAGCGAGTAATAATCGATTtataaaatttgacaaaatcctGCAAAT
CATTGTAAATAAACTGATCAACTAACTCTGGCCCTCTTTTGAAATAGCAA
TTGCAGAAAATATGCATtcgttcaaattttttgaatattttgatatttcg
cAATGAGGATTAATATATTTTACAAACGAAAGGAATGCAACACAAACAAG
TCCAAAGTTTCAGCAAAACGTTGTTTTAGGGACTGGAGTATGTTTGTTTA
CTTCGTATGTTGAAAAAATCCCACGTAAAAGCTCCTCTTACCAACAAACG
CAACAAACAAGACTTCCGTAAATGGAAGAGATGacataaaaagttctttt
gaataAGGTATTTTCTTCATAGTTAGCATGTAGTCAAACAAATAATGTCA
TTGAGAAACTTTGTTTCATGGTCTGTTTGAAATTTACACATGTGTATGAA
GCATTTCAGTGATTCTGATTTTCAAAGCttcaaagggggggggggctgct
TCATTTTGTTCAGACTTAATAGtgcagaaagaagaaaaaaagttggcAGT
GGGTTTGATAATACTTGGACATGAACTTTGTCGGGTGTTTTGTTTTCTTG
AGATTTGTTTGATATGCAACGGGTAGCAGAGCCAATATTCAAACGTATAT
ATTTTGATCAGTTTTGACGTACAAATgtttagactatgctatagtctaag
acgagtttcatctaagaggaataAACGTGAAGACGGAAATTTTTTACGGG
AGTAGCTGTTgtcgtaaacacagactctatccgccgcgaaacatattacg
ttctATAATATACAaattatgttatatcataataatatattatacggacg
atagcatcgtctaacaAATGTTATGATGTCATGCACTGCAGAAaagcttt
caaattttcagaagcGAGAAACTTAAAAATGTTTAAGTCAATACTTATAT
GACCCATCTCGTCTAAGCCTGTTGTTTGAGGCCTTTTATACTTTAACGGT
GCTTATAAGATGATTAGCTTGTGATCCTTCGTAAGACGGTAAATGATTCA
GGCTTGTTACGAGAGTGTGAAGGACATTTTTATTGTCAGAAAGTTCctca
atgttttgatattatcaCGTTCGTAAAATTGATATTGAATTGGAGTTCCT
TTTACATTAGAAAAGTTCTGAAACTTAAATAAGACATTCAAGgagatgtt
ttgatttattttcaaaacaaccgGCATCCGGAAAAGAGGAGAATTTTTAT
GCGAATTGGAGCGTGATTGAGGTTTCATTACGGAGATCCAATTATAATAC
ATAANAATTTTTATGCGAATCGGAGCGTGATTGAGGTTTTATTACGGAGA
TCCAATTATAATACATAAACAGGTTGAGGGCCAGAAATATTATGTTTTCA
ACGGGGTATATGTAGCAGTTATAAGGTCAGGGATATTTGAGTTTGAACGA
TTAAACCCAACACCACCTTCTTTTGTTGTTATAATTACTAGGGAATCGTT
TCTCACTAAAAATCTTCCCATTCCTTTTCAGCTAGAGAACGCAGAAAGTT
TAGAAGAAAGAAAACAACTGCGAACAGAGCTACGAGAATTACGGCGTAAA
ATCTTCGAAGCTCCTACAACTACGACCACATCAATTTCAGTTACGACAAA
AAAGGAACCTGAAGTTTCGAATACTAAAGTGAATATCGAGAAAGAAAACG
CGAAAAATCTCGATTTGAACGGAAACAAGAGGATCAGTGTGACGTTGAAT
ACATCTAAACCGACACCTATCACCATAGAAACCAAAATCAAAGCGGACAC
CACTTCGGAACAAGAAACAGAAAAGCCACGAACAACTTCATCAGAGTCAT
CCACTACTTCCAGCAACAACATGAGCAGCAGCGTTGCGCGACGATCTCGA
CTTTTCCAAACAGACGATAACAACAATGCATCAAAAACAGAATCTTCTGC
TCCACAAGCAAATGGAATCAAACTCAAAATCAACGATGGTGGTGATAATA
CGCCCACGCTCCGTACGCGCGACCCGGCCGATCGGGCCGCACGCAGAGCT
AGACGCGCACAACAGCAACGTGAGATGAGTGTTGACCAAGGGAATACTGA
AACGAACAAAGAAGAAGCGCCAAAACCGACAGAAACGGTCATCGTTGAAG
CGccaaaagaagagaaaaaggaAGAACCAAAGACGACAACAGAACAGAGG
AAATCGACGAGCACTCTTTCCGTTGGAGGAACGGNAAACAAAGAAGAAGC
GCTAAAACCGACAGAAACGGTCATCGTTGAAGCGccaaaagaagagaaaa
aggaAGAACCAAAGACGACAACAGAACAGAGGAAATCGACGAGCACTCTT
TCCGTTGGAGGAACGGGTACAAAGAACACGGGGTCAGCAGGATTAAGAAG
AACTGCAACTTGGGGTGCTAAAGATAAAAATGGTGCAGCAAATAATATCG
GGAAAGCGTTAAACAAATTCGGACCACAGGTATGAGAGCTTTAACTTTCT
CTTCTGCGACTAATAAATACTAACATGATCATCTTTTTAAGCGATACTGA
TGTTAAATGGACTAACCATCTTTGGAACCAAGTGACTAACATGTTGAAGT
TGCGGATGTTGTGAGCTACACTGATTGCTTTGAAATCATTACTCACATCC
ATTTCAATACACACATTCATTTCATTCATTCCATGTCACTCATGCAAACa
aacacaaattttcatttccatCTTCAAGCAAAATTAGGTCATCTCCAGCG
TTTTTCATTTGTGTAGATCCAGAGGTTGCATAATTGAAATAAACTTCCTT
TTATCcattcatttattcattcataTTCACTTGAACATTCATCCATTCAA
CCACGCCTTTTAATTAGCCGTCGTTATTTGAACACtactgtctcacagcc
ccggtggaacttttttcctaatactcctattgaaatcctaatggcgatag
aaattctatttttccaaggttaaaaaatccatttggatggttttgaagtg
caatttttaaacatggaatttcgagtggggatgaaatcaaagtcaatatc
CCAGTGGGGCTTAAGTTCTTAAGGGTATTTTCAcaccgggacgaaatttt
tgcttaattttctagtggggctggggtcccagcgggtctgtgacacaggg
gtgttttgagACATAATGATTTCCAAATCTCTCACAACATATCACATCTT
CATCCTCATTGATCTCTCTCTCTGTTTCACTAATCATTCCAATACACTGA
AATAAGTTATATTTTTAAATAGCATAACCCACCCTGCActatttttttcg
cttttttttcaaaaaaatatacacGTGTCACACCTTTTGAAATGTTATGA
AAACTAGCTTTTGATAATATGTTGAACATTCTTTTCTAGAACAAACTCTG
AGACAATGCATGATCAAGCAAACTTTATTTGCACTTCTCTGTATCACTTC
GTATTATAAATATGCACATATaatcaaaaacatttcttttttgcACATCA
CCACCTCATACAGCTTGGAGAGAGCACTCCTTTTCAATTTGGCACCGACT
ATACAAAGAAGAACAATACGCCCAAACCTGAAAACACGCCCAGATCTTTC
AACAAATACACGCCCGGAGTCGCCACTGTTAAAGCCCCGTACACACCAGT
AACCAAATCAGAGACAACGAACGCACATTCGAATGGGAGCGTTGAAAGTA
CAGGCGCACGCCGACCCTCATTTAATAAATACACGACACCTGCCATGAAC
TTTAAGAACTCTCAAgctataaaagaaaatttagacAGTTCACAAGAGCC
ACAAGAGTCCAAAGTGTCTAGTGACGTTGGTACGGCTTTTGTACCGAGAA
AATTCTCTCCCACTAAAGACATTATGAACCAATTGGAGAAAAATAAGTCA
AGCACATCGACACCCAGTTATAATAAATACACACCCAATAAAAATCCGGA
TAGTGGTTTAAACAAAGTAAGCCGGTCAGTTTCAATGTCTGCTTATGAGA
GGAACCTGAAGAAAACACAAACACCTCCTGAGCCTTCAGTGTCTTATAAC
AAACTGAACAGATCTATCTCGGACTCTACCAATGTTACAGGACTTAATCG
AGTTGGAACGAACAATCTAACCGGATTGAATCGGGTTAATTCGAACAATT
TGACCGGTTTAAACAGGGTCGGTAGCACAAATAGTGCAACTGGTTTGAGA
TCTGTTAGTGAAGAGGTAAGTCTTCTTCATTATAAGACGATTAATATACG
GTTTGATAAAGTTTCACAAGCGTTTATTTATGCCCTTTATGGTTTTTAAT
CTACGGTTTGGTAAAGTTTCACAAGCGTTTACGCCTAACATGTTTAACAA
GTCTagtgaaaaaaatttctgtCTGTTATGAATCCAAGCATCGACATTTA
ACGGCCTCAACGACCGTAAGAGATCTATGATTTATAGGGTTCTCAAATCT
CGTTCATATCTTCAATAAGTCTTGTAAATTGTAAGCACTAGTTGTCTTCA
CTTTTATGATTGTCAATTAAAATTTATTTCTCATTTAGAGTAATTCTTCA
TCAACGACAAAACGACCCGTTTCCTCGTACGGTGGTGGTGGCAGATTTGC
AAATTTGTAAGTTCGCGTAATGTTTGATGTGTCACTCCTCTTGCAAAGTT
CACTTTCGTCGTCATGCTTGTAAACTTAACCTAGGTTGTATTAGGGTTAA
AAAAGTCCTAAATTTTATATTATCAATGTTTCATTCTTTGCTTGGAAATA
TTGAATGCTGTTTGTTGTTAGACGGTTTATGGTAAATATACCGTTCCCTT
ATTCTATTCACACCAGGAGCTCTGACCCTGTTCCGCCACCACAACCCAAA
CCAGAACCACCAAAGCAGAACGGAACGCCTTCTTTTGGTAACCCAACTGG
TACCCAATCAGCGGCCGATCGAATGGCGTATTTCAGACAAGCAGCAGAAG
CAGAGAAGAAGAAGGTGGAAGAAAAGAAGGCGGCGGCAGAAGCGCGACAA
AAGCAACAAGAAATGTTGAACGCTGTGATGAATGGAGAGGTCTCCATGGG
TAGCAACAAGAaagaggaagaagaaaaaacaccAGCTACACGTAAAGAGA
GTAATGAAGGGGGCGCCAAGAAAGGAGGATCTTCTGCGTAAGTTATCCAT
CACTTGTGCTGTTTATTTGATTAAGTAAAAATCTAAACAGCTACAAGTGA
CTTGCGCTCGTTTTATTCAGATTAGCTTTTTTACATTCCATAACTATCTT
CCATTTCAGGCCATGTAAGAGGCGCGAGAAAAAGAAGGTTACCCGTCGAA
CGATGTCCATCGGAAGCATCGTCCTCGATTGGGTGCAAGAAATGATCAAA
GATTATCCAGTGGAAGTGACCAACTTCTCCTCCAGTTGGAACAATGGCAT
GGCTTTCTGCGCACTCATTCACGCTTTCAATAAAGATGAGTTTGATTTTA
GTGAGCTCAAACCGGAAAACAAACGCTACAATTTTGATTTGGCATTCGAC
ACAGGATAGTAAGTGTATTTCTTTTAGTATTTCATTGCTTTTGTTCTGCA
GGCCTTTGGCCTCACCGTATCTGGATAAGGTATCATTCGCCCATAAAGTA
GCAAGACAGGCCTTTAACGGACGGATAATCTACAAACTAATCAAAGAACA
TAAGGAAGCCGTTTTCAAACTAGCCGCCCATAAGATTAAGAAGACGAATT
AAAAGTGGGAATTCGATTTTAACTCAAACATTGTGAAAANCAATAAGATT
AAGAAGACAAATTAAAAGTGGGAATTAGATTTTAACTCATACATTGTGAA
AAATTTGTTCAACTTTATTGACGTCTGTTGAAGTCAATGAGTTTAAATTT
GGgctttataatttattttaaatttgacgaatttttgaaaatccacCCAT
GAGTTGTTTTTTCAACTTTGCTTTTTCATTATGTaactattttcgaaaaa
aaaaatttatgataaTACCCCACTCATAGAACTCCATCAAAAGTTATTCG
CACTTGTAATTTTACTGATAACTAATTTGAAAATGACTTAAGTATCGTGA
CATTAAGACATCATACCAGATGTAGAAGGAATTGAAACTAAGAAACGTGT
CATCACGCAAGAAAATTTATGATAATACCCCACTCATAGATAACTCCATC
AAAAGTTATTCGCACTTGTAATTTTACTGATAACTAATTTGAAAATGACT
TTAAGTATCGTGACATTAAGACATCATACCAGATGTAGAAGGAATTGAAA
ATAAGAAACGTGTTATCACGTTTGAAAAAAGACCTAATCGTAATCAAGCA
TCAAACTAAACCGTTGGGGGCTTCtagaaagaatttctttttaaaaagat
cTCCAGTAAAATTTTCCTGTTTATGTTTCAGTAAAGTGAAGAAGATTCCA
AAGTTGTTGGACACAGATGATATGGTTGCTATGGCTCGTCCTGAACCCAG
GAGTGTTCAAACCTATATTCAATGGATTTGGAGTGTTTACGGACCAACCT
CTGGGTACGGGCCTACCCCACAAGAAgtacaaaaatgaaaacataaaaaG
TCTTTGTTAGAAAATACTTTGGAAAAGATGATGGATGGCAAAATTATCca
caaatttcagaaaaaaatagagAGACTTGTAGTGGAATTGACGGGTGCGA
CTGAATTTCCCAGAAGTTTTGATGGCTTGAGACCTCTACAATACAAACTG
AATACATGATAGATGAAACCTCATAAGTGAGCAAAGCTGAATAGACGact
tataaattatttttcttcttcgatTTCTTTCTGATACAATTTTTCTCACA
TTTGTCTGGTTTGAAAAGCTTTTGATTTATACgagaaagaaatttatttc
tAAGTTAAAGAGTTTCGGTAAAACTAATTTGTTTATGAAGCACTGAAATC
ATACGAAGAACCAACTTTAACTTTTTCGTgtatataattattttatccTC
GATATTTCGTTGATGCTTTTTGTATATACATTCTTCTtctaaatttattg
taaaattaTTGAATAACACTTTCCTTTCCCTTCTTattaattttcccaaa
attacaataattttagttttatgaatatacttaaaaaaaaagttttatac
gATTTTATATTCGACAAAATTCTTATGTTGACTATGTTTATTTTGACTAA
TAGAAACGGAATAGAAAATTATTTAAGTTTGAGGAGACCGGATTTTTCTC
ATCTAAAAATTGCTTACAAAAGGGCTGACCCTTTTTCAATTACCCCTTCC
CCCTTTATAACCTTCAGGTGACACCTtgctgtcagaaatgtcatcattcT
CAAAGTGTGGatatttttag

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004709	XLOC_004709	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000085	supercontig	sc0000085:119259..137078 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.06247	3.15574	3.97699	1.74814	0.428542	1.02821	0.471647	0.16444	0	0	14.7499	21.8574	0.460826	0.128319	15.3477	16.0017	53.7151	58.5024	60.0139	61.6545	2.23355	0.332191	0	0

Blast

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BLAST of TCONS_00008388 vs. Swiss-Prot (Human)
Match: SMTL1 (Smoothelin-like protein 1 OS=Homo sapiens GN=SMTNL1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.802e-27
Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 2

Query: 1919 IGSIVLDWVQEMIKDYP-VEVTNFSSSWNNGMAFCALIHAFNKDEFDFSELKPENKRYNFDLAFDTGYKVKKIPKLLDTDDMVAMARPEPRSVQTYIQWIW 2218
            + +++L+W + M K Y  V++ NFSSSW++GMAFCALIH F  D FD++EL P  +R+NF LAF T  K+    +LLD DDMV +A P+ + V TYIQ ++
Sbjct:  343 VKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDYAELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLAVPDSKCVYTYIQELY 443

The following BLAST results are available for this feature:

BLAST of TCONS_00008388 vs. Swiss-Prot (Human)

BLAST of TCONS_00008388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SMTL1	1.802e-27	49.50	Smoothelin-like protein 1 OS=Homo sapiens GN=SMTNL...	[more]

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TCONS_00008388 (transcript) - C. hemisphaerica