TCONS_00008387 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008387
Unique Name	TCONS_00008387
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3786

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000085:119232..137078+

transcript sequence

>TCONS_00008387 ID=TCONS_00008387|Name=TCONS_00008387|organism=Clytia hemisphaerica|type=transcript|length=3786bp
ATTACTCTTCTCCGCAGAGGTTCTCGTTTTCAAGATTGATGAAATGAAAT
ACAAACAAATATatggaaagtaaaaaaaaaaaagaaatcttttcgatcaa
atAATCTACCCTTCTTAATTTTCTGATCACAAAAAGGATCAGGTCATGAT
GTCTGTCATCTTTGCATAACATTTCGacaaaaattcatttctttgtGACG
AGGGAAACATATCTGGCATTTGAGGGAGCTGGCTGACGAGAAAGATTACT
CCAAGGAACGTTCTTACGACGACTGTAGTTTGGTAATTCAGAAGAAATTT
CTTTGGGATTTTCTGCTTTTGAATACTCAGAATGCCGCTTTCAATATCTT
GCGAGTCGTCCACTAATCTCCGCAAAAGTCAACTGTTTGTcggacaaaaa
aacaacaaaacaacgACGTCATCAAAAGTGTCGATTCGACCCATCGCAAG
TTTGAATGGAAGAGATTCTTTGAAGAATAACTTACCTGTCGataaaagaG
TAAGCAAAATGACGACCCTGGAAGAAATGGAAAAAcgtgaaaaagaaatc
aaagtcaTGCTAGAGAACGCAGAAAGTTTAGAAGAAAGAAAACAACTGCG
AACAGAGCTACGAGAATTACGGCGTAAAATCTTCGAAGCTCCTACAACTA
CGACCACATCAATTTCAGTTACGACAAAAAAGGAACCTGAAGTTTCGAAT
ACTAAAGTGAATATCGAGAAAGAAAACGCGAAAAATCTCGATTTGAACGG
AAACAAGAGGATCAGTGTGACGTTGAATACATCTAAACCGACACCTATCA
CCATAGAAACCAAAATCAAAGCGGACACCACTTCGGAACAAGAAACAGAA
AAGCCACGAACAACTTCATCAGAGTCATCCACTACTTCCAGCAACAACAT
GAGCAGCAGCGTTGCGCGACGATCTCGACTTTTCCAAACAGACGATAACA
ACAATGCATCAAAAACAGAATCTTCTGCTCCACAAGCAAATGGAATCAAA
CTCAAAATCAACGATGGTGGTGATAATACGCCCACGCTCCGTACGCGCGA
CCCGGCCGATCGGGCCGCACGCAGAGCTAGACGCGCACAACAGCAACGTG
AGATGAGTGTTGACCAAGGGAATACTGAAACGAACAAAGAAGAAGCGCCA
AAACCGACAGAAACGGTCATCGTTGAAGCGccaaaagaagagaaaaagga
AGAACCAAAGACGACAACAGAACAGAGGAAATCGACGAGCACTCTTTCCG
TTGGAGGAACGGNAAACAAAGAAGAAGCGCTAAAACCGACAGAAACGGTC
ATCGTTGAAGCGccaaaagaagagaaaaaggaAGAACCAAAGACGACAAC
AGAACAGAGGAAATCGACGAGCACTCTTTCCGTTGGAGGAACGGGTACAA
AGAACACGGGGTCAGCAGGATTAAGAAGAACTGCAACTTGGGGTGCTAAA
GATAAAAATGGTGCAGCAAATAATATCGGGAAAGCGTTAAACAAATTCGG
ACCACAGCTTGGAGAGAGCACTCCTTTTCAATTTGGCACCGACTATACAA
AGAAGAACAATACGCCCAAACCTGAAAACACGCCCAGATCTTTCAACAAA
TACACGCCCGGAGTCGCCACTGTTAAAGCCCCGTACACACCAGTAACCAA
ATCAGAGACAACGAACGCACATTCGAATGGGAGCGTTGAAAGTACAGGCG
CACGCCGACCCTCATTTAATAAATACACGACACCTGCCATGAACTTTAAG
AACTCTCAAgctataaaagaaaatttagacAGTTCACAAGAGCCACAAGA
GTCCAAAGTGTCTAGTGACGTTGGTACGGCTTTTGTACCGAGAAAATTCT
CTCCCACTAAAGACATTATGAACCAATTGGAGAAAAATAAGTCAAGCACA
TCGACACCCAGTTATAATAAATACACACCCAATAAAAATCCGGATAGTGG
TTTAAACAAAGTAAGCCGGTCAGTTTCAATGTCTGCTTATGAGAGGAACC
TGAAGAAAACACAAACACCTCCTGAGCCTTCAGTGTCTTATAACAAACTG
AACAGATCTATCTCGGACTCTACCAATGTTACAGGACTTAATCGAGTTGG
AACGAACAATCTAACCGGATTGAATCGGGTTAATTCGAACAATTTGACCG
GTTTAAACAGGGTCGGTAGCACAAATAGTGCAACTGGTTTGAGATCTGTT
AGTGAAGAGAGTAATTCTTCATCAACGACAAAACGACCCGTTTCCTCGTA
CGGTGGTGGTGGCAGATTTGCAAATTTGAGCTCTGACCCTGTTCCGCCAC
CACAACCCAAACCAGAACCACCAAAGCAGAACGGAACGCCTTCTTTTGGT
AACCCAACTGGTACCCAATCAGCGGCCGATCGAATGGCGTATTTCAGACA
AGCAGCAGAAGCAGAGAAGAAGAAGGTGGAAGAAAAGAAGGCGGCGGCAG
AAGCGCGACAAAAGCAACAAGAAATGTTGAACGCTGTGATGAATGGAGAG
GTCTCCATGGGTAGCAACAAGAaagaggaagaagaaaaaacaccAGCTAC
ACGTAAAGAGAGTAATGAAGGGGGCGCCAAGAAAGGAGGATCTTCTGCGC
CATGTAAGAGGCGCGAGAAAAAGAAGGTTACCCGTCGAACGATGTCCATC
GGAAGCATCGTCCTCGATTGGGTGCAAGAAATGATCAAAGATTATCCAGT
GGAAGTGACCAACTTCTCCTCCAGTTGGAACAATGGCATGGCTTTCTGCG
CACTCATTCACGCTTTCAATAAAGATGAGTTTGATTTTAGTGAGCTCAAA
CCGGAAAACAAACGCTACAATTTTGATTTGGCATTCGACACAGGATATAA
AGTGAAGAAGATTCCAAAGTTGTTGGACACAGATGATATGGTTGCTATGG
CTCGTCCTGAACCCAGGAGTGTTCAAACCTATATTCAATGGATTTGGAGT
GTTTACGGACCAACCTCTGGGTACGGGCCTACCCCACAAGAAgtacaaaa
atgaaaacataaaaaGTCTTTGTTAGAAAATACTTTGGAAAAGATGATGG
ATGGCAAAATTATCcacaaatttcagaaaaaaatagagAGACTTGTAGTG
GAATTGACGGGTGCGACTGAATTTCCCAGAAGTTTTGATGGCTTGAGACC
TCTACAATACAAACTGAATACATGATAGATGAAACCTCATAAGTGAGCAA
AGCTGAATAGACGacttataaattatttttcttcttcgatTTCTTTCTGA
TACAATTTTTCTCACATTTGTCTGGTTTGAAAAGCTTTTGATTTATACga
gaaagaaatttatttctAAGTTAAAGAGTTTCGGTAAAACTAATTTGTTT
ATGAAGCACTGAAATCATACGAAGAACCAACTTTAACTTTTTCGTgtata
taattattttatccTCGATATTTCGTTGATGCTTTTTGTATATACATTCT
TCTtctaaatttattgtaaaattaTTGAATAACACTTTCCTTTCCCTTCT
Tattaattttcccaaaattacaataattttagttttatgaatatacttaa
aaaaaaagttttatacgATTTTATATTCGACAAAATTCTTATGTTGACTA
TGTTTATTTTGACTAATAGAAACGGAATAGAAAATTATTTAAGTTTGAGG
AGACCGGATTTTTCTCATCTAAAAATTGCTTACAAAAGGGCTGACCCTTT
TTCAATTACCCCTTCCCCCTTTATAACCTTCAGGTGACACCTtgctgtca
gaaatgtcatcattcTCAAAGTGTGGatatttttag

Run BLAST on NCBI

transcript from alignment at sc0000085:119232..137078+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008387 ID=TCONS_00008387|Name=TCONS_00008387|organism=Clytia hemisphaerica|type=transcript|length=17847bp|location=Sequence derived from alignment at sc0000085:119232..137078+ (Clytia hemisphaerica)
ATTACTCTTCTCCGCAGAGGTTCTCGTTTTCAAGATTGATGAAATGAAAT
ACAAACAAATATatggaaagtaaaaaaaaaaaagaaatcttttcgatcaa
atAATCTACCCTTCTTAATTTTCTGATCACAAAAAGGATCAGGTCATGAT
GTCTGTCATCTTTGCATAACATTTCGacaaaaattcatttctttgtGACG
AGGGAAACATATCTGGCATTTGAGGGAGCTGGCTGACGAGAAAGATTACT
CCAAGGAACGTTCTTACGACGACTGTAGTTTGGTAATTCAGAAGAAATTT
CTTTGGGATTTTCTGCTTTTGAATACTCAGAATGCCGCTTTCAATATCTT
GCGAGTCGTCCACTAATCTCCGCAAAAGTCAACTGTTTGTcggacaaaaa
aacaacaaaacaacgACGTCATCAAAAGTGTCGATTCGACCCATCGCAAG
TTTGAATGGAAGAGATTCTTTGAAGAATAACTTACCTGTCGGTACGCATT
GCTTTTCATTGTTCTTATGTCCATGTTGTGCATCCTCTTTTATCCGATTC
TTGTAAACTGTTTTCTGATTATGAGAAATTCCCTTCAAAACTTCCCTCGT
TCATACAGACGAATGTTTTACTTCTTTTTATGTGCTTTGATCATCGCAAA
CAATTTTGTGCAGAATGCTTGGCTTCCAAGAACAGTACCTCTTACAGGCA
AACTTATAGAAATTTTATCTCATAGAAAAGGGATTTTTCTACTGCTTTTA
CCTGAAAGAGACTGTTTTTCCCTAAGTTGAGAGGGGTTATAAACTCATGG
TCTTGGACCAGCTGTTTCGGTGAGGTTATATTGGTAATTGAGATTAAGCA
TTTTGCTGTCCTCATCTTTCATTCAAACCATGTGTAGCGGAATGCGCAAA
CGAACAGATCTTGTTACAAACCTTTTGACATTAATCGAAAAACATGAACa
acttttaattaaaaattggataatCTAAACTCACATATTTGCTGTTGAAA
GTTTAATATGTTCCTTCTAAACGTCATTTGATAGAGTAAATGTGAAAAAG
AATATGGCCCCGGATAATGTTCCTCGTCTACTTTTCCAGGGACGAGCATT
TAAGCATTATGAGCAGCAGCATTAATAATGGAGCAATGTTTAATTAAAGC
ACTGAGTAACAAGGNCAGCAGCATTAATAATGGAGCAATATTTAATTAAA
GCACTGAGTAACAAGGGAGCTTTTTAATTAAGGGCAACATGAGTCCACCG
AAGCAGACAATTAACTCAAAACCGCCATTCATTCCACCCTTTTGATTTCC
CTTTAAACGAATACCATCACCATGGGCGACACAAATTGAATTTTTAGCCT
TTTTCAACTATAGGATACATAATTTTCTTGATGCGAGAAATGGAAAGATT
AATAGAGTAATCGCTTATATCGATTCTTTGAGCCAATTTGTCAAGCATTT
TTCTTGTatttccaaaacaaaaaaaagagagGGCTAAAGGCTTTTATGCT
GTAATGATTCCATAGAAAGAATGCAGtcgattttctctttttctccaGCG
ATACCCATCACTTGATTGTTGTTTTTCCTAATTTGATTAAAGACTATTCA
TTTAGTGTGCTTGTGCTTGAAAGTTCGGATGTAGTTTGTGTGTGCTGTAT
ACTCCCTGCATCATTTGTTCAGGGTTTAGTAATGCGAACTTAACGCATAT
TATTTGCataaaaatctatttcaaaacattcagtTTGTTTGCTTATACAG
GATAGTTTGATGCTTTTAAATTGCAAAGAGAATTGATATTTCTAGAACGA
CATTCAACCACTATTCGATTGGATATTGGTGTCTGNGgcatatgattctg
gctgggttgttcttaaatttatatgtatttttcagccttaaatgtcaata
tcaattaaaatggaaacatgtacttctcagtaatttcggaaatctgaggt
tcagattcttcttaatttgNGCTCAAGAATAAGATTGCTCGGGGAAGAAT
AGAGAGAGTTAATAAAAAGAGAAGAGCAAGATTCTCAACCCTACAAGAGA
ATGGGTGCTCTATCGTCTCAGATTAATAACCTTTTGTAGGGATTGttatt
gccaccggaggaagcctaaagcttctgaggatggcattcatagcttcacg
cataaggaagttgggcaatcatctcataattttgcgcgcgtttttcagta
tNcactcccttgacacatttgttagcatttgaaagaattttgtctcagat
gagaggtcactcttaacaaaaattactgtaggactaagatcattcctttt
gaacgcaaattcaactctatgtgtttcgttttgctgcggtggcaccttaa
tgaaagttatggctagtgtaatatattgaattttgctttgttttgtattt
ttcagataaaagaGTAAGCAAAATGACGACCCTGGAAGAAATGGAAAAAc
gtgaaaaagaaatcaaagtcaTGGTATGTTTAACTTTTTACGGAGAGTCT
AActacaatacacgtttttttttataagaacgtaaAAAAtgttcgaagcc
ttcggatgttcttagttttttggatttgaagcctaaagatgttcttaaaa
tgttcttattttcagcattttttgagcattttgatgtaatttcttaagaa
attgcatgtttttaagtctccaaagccttNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtatatagtttgttcttataaaaaaaacgtgtacacc
tCCTTCTCACGTAACCGGTACGACTTTTTGAAAGTGTAGGGGTAAAGATA
TCGTATCCGTCGAGATTCGAATTCATAACCGTGTCATTCACGCATGTTTG
CTCTACTATTTGCTACGAGAAATCGATTGCCACTTTATAAAACTTGAAAG
GAATTTTTGTCTCCTGACTAAACTTAATAACCGATATTTTCCTAATGATT
GgcacccagccggcacacaacgtcaaaataACGTCCACCtgacgttcaca
acgtccaaataacgttacttgaacgttgaaacaacgttgtgtaccagctg
ggcaAGTGTCTCCCATTCTAAATTCTGAATTTCGACACAGCATTTTGGGG
TGAAGGATAATGTAGGGTTATATTTACACTAAGCAACAAACTATTGTCGT
CTTTATATGTTGTTTACTCTGTGATAATTTGGGCAAACAGCAACAAAGCT
TTTAATGGGGTATCTTTCTTGATCCATGGTTTCTAAACATAAAGATGATG
TATTAAGTCAACATTCTGCAGGGTTGGAATTTATTGAAGTAGttggtgtt
tttgttttatgacaaaagatttttataacCAAGACTTCACTATCTAAGCG
AAATCTAAGGATTCGAATTATAATTGATGAACgcatttaatttttgtttt
gacctTAAAAAAAGACCACCTGCtagtttattttcaatttagaCGAtcta
taaataaaacaaaaatatgccTAAGGCGTTTTAAACAACCAATGTCTATT
AAACGGAACACATACTTAGCTAGATGCTCTCACTTTCTAGTGGCCAAAAG
ACTTGTtaattttcttgactttttcaATTATGTTATCATCTGACAATGAT
GTCTAGCATACAAGCTTAAATAAACTAAAGCTGGGGGTGCTCCTTTGCAT
TATCTTTGTCGCGGCTTTGATACCCCTCACCcacaaaacacccctgtctc
attgacAGATGGAGATGAAGGAACTAATTGCCGTTGGGGTTCTAATGTTT
ACAGGACAAATGTTCACTTAAACCACTAAAGTTTTATTCTCACTGGAAAT
GAGACTCAGTGGATTTTCTCTAGGGGAATGAAATTTCGGGGTTTTATTTC
TCACTGGGTGATATTTTGAGCTATTGTGTTGCAATACAGGTGTctctgac
acaggggtgtagcAATCAAAGGTACTCCTTGAACAACAAGAAAACAGCTG
TAATGAGATAATATTGCTTCTAAACAAAGATCGAGTCCCTACAAATCATG
CCGAGgtataataaaaagttaaacATCATTGGTAAGATTATTCGGCGTCA
GTTGCGTGACTTTtctgaattcatgatatgcaccattgcaatgtcttctg
acattacatcatgaaccaaacagctgattggttgtaagtgacgtaaaatc
agtcattCCGTCACTtgtaaccaatcagctgttgggtccgttgaagacat
tacaatggtgcatatcatgaataaagcaTGCTACTTCCTCAACGAACTGT
GTCAATCAGGAAATTTCTACAAATCTCCAACGGTCAGCATaccataaaaa
aagaaaaaaaagaaacttttaagATAATAGGCATAAAATGCCCTCCTACA
AGCTAGAATAATGAATGTATAACATTTTTGCTCGAGCAAATAAGTTTGAA
AAGAAACGCTGTTAGTTCGCTGTTGTCTTTTATGAGCAGGCTTTGCAATG
GAACTTTATTTTCTGGCTGTTTGTTATTTTCTTGCTTCAGTATGTGGCTT
GACGTTGTTCAAGAAGTTTTTTCTCATTCTCGTTAAATTTCAACCTTTCA
CTGGAATGGTTTGAATCTGGTTTTAGGAGTAAGAATTACAGTGAAGAATT
AGGCTCATATCCTGCTTCGAAGGGTCAATATAAGATAGCAGTTTAAATCG
TCTACTTTGACCTAGTTTGGGTGACGCTTCGTTGTGTAGGTCTTTCCTAG
CTAAATCATAGTAGGGCAGTTATACTATTTATTTGTCAGTTTGTCAGAGA
GATTAATTCTTATCATACACTCAGTAAGATTGATTCGAATTTGAATTAAC
TATATCCCTTAGCAACGCCCAGATTTCATCAAATGCAAGATTAAAACAAT
ATAATGAAATTCTAGATTTGAGAGGACAGGGTCAACAGGGCATTGGCTTC
TTAAGCGTTTGCGTAGATACCTTTTTTTGTCAGAATGAAGAATTTCAACG
CATACATCCAGGTATATGTCGACAAGAGGATTTATTGTAGTTTAATGGAA
TTGACAAATATATCATGATCACAAACTTCATTAAAATTAACGAGATTTTA
ATCATTGCGGTCTTCATTGCTATTACCCTTTTAAATCTCTCCCTTCCTTT
CACAACAAACAAACGGAACGTAGACAAGAAAAGTAAGAAGTACAGATTTG
AAGTTTGACTTTGACAGATGACACGattcaaaatattgaagaaaacTTCT
ATTTGAAACTAAAACAAGTTTGTATTTTATGGCGGTTGTCAAAATCATCA
GtggtttttgaaaattatatatcAGAGATGGGAGAGATATTGTTGGACTA
GTGGAGCCAGAAACTCCCATATTGTTTACGTCGTTAAAATTTATCTATCT
CCTTTCTTTTGATGTGATTTATTATTTTATGGTGCTTGAAATATAGAGTA
GCTGAAAGGAGTGGGAATGGGAGACTGCGTGAACCAGTGGCTAGAGTTTC
TAATTTCTTGAATATCCCTGTTTcaacagggatatgttatagcggagctg
gataacgcacatttgaaaaagccttgttctatctctgtccctgacattaa
aatctGATattaaattaaacttttttaattacaaattcgtgaaatttgga
tttctttttagccaatgattctgctgctgcatttattgttcacgattaaa
aactattaattatcataagggtctgtaaaacattggtgaatgacaattta
aaaaaatgaaaaacattgttttcattagtaaagttactAGGTCACAGTAA
ACCACACCGAAACGACCTTCCATCACGCAATcgcgcatcacgctcgcgaa
agagcgcgcgcacattattaacgcttaCATGTCATGTACCAGAtaaacat
gtcatctccagtacattttagataattcattgaaaacagattacaatata
gtcatttttcatgtctcgattattcaattccatatataagacattcaggg
aaaaaaagagaaacacctgggtctACCTGGTCACCTGTAATATAGttgaa
aaaaccgaaagtaaatggtagacaaagtaatgagccaaggcaaaacgaga
ttagcgtaccactatgaaagaatcCGCCTCCGGTGGTcgataagaaattt
cttctggaagaccgcggggtgcctcgctttctaactgatattttcagata
gcaagtcggtatgtctgattatggaaaaaatttcaagtcaattgaaacaa
tatttgtcaaaatatttacatccgaaatttttaaagagaaatcatgaaag
cttctcaaattcataacacacgctgataaaattagatatcatttacaaag
aagctttcggggtatcttttgcaaatattattttgatgaaaagcgggaac
atcgtagcaaaatatatgcaaacgtactgcatgaatactttgtctgcttc
atttttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatactttgt
ctgcttcatttttcttataaaaacagaacactctaggggacagagatgga
tttctattatgaacagtttacaatagaaaagacaaaggagcGATCcacta
aggaattctcgtccttcatccagctccgctataacatatacCTGGTTTCA
ACcagttttaatattttcttcaatttaaAACTGTTTGACAGTTACAACCA
ATTGCAATTAAACTTTCTTAGTTGATCGGAGTTGTGGCTTGTGGTGAGAG
TATCACTACGTCCAAACTTTTAAATCCGTGATATGATGACCAAtttcaat
ctttaaaagaaagacATCAATGTCAGTAGGACCTCAACAGACATATAAAC
ATTCAATAATGGTTAAAAATTGATCATCAAATTTTCTCAGCTTGTTTTAC
TAAGATTCGTGCTTGATTTGTTGagtagaaaatataaaatttatatGTTT
ATATTTTGCGAGTTTTTATGGTTTTCTCCAGTCTGATGATTAGGAAACTA
CAAATTAACGGATTCCATCAGTCGATTCGCTCATTAAAACTGTATGAAGC
AGTTCagtgctgtttttttttatcctCTCGAGGATTTTTGGGATTTCAAG
GAGTCGTCACTGGTCATTGTGatattatttttagaatttacaGTATGGTA
TTCTTCATAAAGTGCAAAAGCGTTTCAAATTTTGGAATACTTTGGGTAGC
CTAGTTAGGTTCTGGGgaaattttgcttttatttttatacattttcatGG
GACATAAACTGGCTAGATTTCCTGGGGTAAAAATgtacaatgaaaatttt
ttagcTATAACAGGAATATGTTTCAAGCCACGTATATAGCATACGATTGT
TGTGGTTaaatatttctattgttttttcgATGACAATCACTTTTCAAATT
AAATGGACCAATAACTTGATTCACTTACGGTCTTTTTAAAGTTGATGAGA
TCCCGTCATTTTCTTAAGAGTTTAATCCGTTGCTGATGACCTTTGTTTCT
TTTCAGCTCAATTAATTTGCattcaaaatcttttaatttgtaAACTCATT
AACTCGGGATTAAGGcctgctcagtttgaagagacTTTTCTTTCATCAAA
ATTGCGTAAAATGTTAATAAAGGCCAATCTCTAATTATCGAATGTTTGTA
AACAAGGTTTACCAAAATGGGTCTTTGAAATGCTGGTCGCCTGGCCTTGG
CAAATAAGcatgaaaagggtcaaaatttaattttattacgTATTTAGAAT
TGGtgctcggaaaatttttttttatttggaacGTCTTTGGAACGTCTTTA
AAATGTGTAATTAGGATATTTGTGGGTTGTTGGCGAATTCAATTCCTATA
AAATTGGAGGCTTCATTCTCAAAGATGAAACGAGAACCTGAGTTTGAAAG
CCCTGTGACGACCGCATAGTTTCATACAAAATGACTCAGTGATCCTACAG
ATACATATAAAGTATTACAACAAAGCGATATTTTGACAATATAGAGAATC
TCACCCTAACAACAAGTGTTTCTATGTGTTTACAGTTGCGGTAACGTTAA
ATTTCCGGCTATTTTCACACACATGGCTCTCCATCTTTAACTCGCTTGAC
ATGTCAGCTCTACATCAATGTACATCTTACTCTACGAAGGAGATATTTTT
TCTGAGGAAGCTATTACATGCCAACAacctttcaaaaattgaaataattt
tgtctttttgacaAATTCCAATCAATATAGATGACAAACTGTTccaaagc
aaaatatttttgatggaGTTGGTTGTATTGCAATAGTATGTCAGTGTATG
GAAAATTTGCTGGCATCAATTTTTCTAAAGCAGTTTTTGTTTCACTTTGA
TCTTCTTTCCATCTAAAATTGTTCTGTTTCACTTTCCATCCATCCTTATG
AAAACATAATTTATGAATTACCATTGCCATTGCCATTGCCATTGCCATAA
ATGCgtagattttgtattttttccaaTTTGCTTAATGGCTACAAATTTGG
GGGATGTCTTAAGATCACTTAAAACATTATTAAATCACGGTCgtcgaaaa
tcaaaaaatgctttACTCTCAATCTCTCAACTGTGAAAAATGAATGCTCA
CTTGATATGACATGATGATTGGCTTTTCCAGTTAAGAATTTTGATGGTGG
AGAAATAATCTCGTCATCGATCCTGCGCTAAAGGGATATGGCAAGTGTGA
TGGTGGACATGGTTGTTCGGCcaaaacatccaaaactttgTTGGCTTTGG
gttgaaaaagaaagtgaaagcgaCTCTgcccagacggcacacaacgtcaa
aacaacgtccatgtgacattcataacgtccaaataacgttatttgaacgt
taaaacaacgttgtgtgccagctgggtgtgGTAATGTTTATCTTTATGAT
TGACGTTTCTTAATCGTCTTGTTTTAGCCAGTTACCGCACGGAAGTGgaa
tattttcttttattgGCTTAGAAACTTATTTGGGCTAAAAGGTTGATACA
AtgctttaaattttttaattagtttGATTAGATAACTAGCAGAAAGATTT
CGTTGttggaaaatattgaaaagagcCTATATTTTCGAAGAAAGCTTTTG
CTAGGACCTTGGGAAGGTGTAATAGAACCGTCTTAAAGTTTTCTTCAATC
TGGCCACTGAAGGGGCCGTTCGCCCAAAAAGATTTAACGAAAGAATGAAT
CTAATTTCAAATGAATTTATTCTCATTTTAATCAGGAAAGCTGGTAGTGT
GTGCCTTCAATATTCAACACGGCTTGCCATTTTATTGGACCGCTGTGAAA
AGGATGTAGCCTTCGCAGTTATTTACTAGTTTTTAATTCAAACCCTTTTC
AGGAGCAATCCTTTCCATTTTCGGCCACATAATAACTGATTTAATTTTga
tgactttttaatttttttgaaagtttcagtTTTGTTGTATTGAAGGTCAT
CGACAAATTTTGTCACTGGTGGTTTAAACTATTATATCAAAgcgttgaat
ttcaatattttgcacTTCAGGGACGCCATCTTTATTATAAAGAAACTTAT
AAAcacttaagaatatttttctatCATAACATTAAATTGTATGTTATCAt
cacatttttgaaatcttctcaAAAAGCTTCCTGGTCATTAAGAAAACCGT
CTAGCGATTGGAAAGGTCCTTTTCTTCAATTGGAAAGGTCTTTTAAAACC
TAACCATcctctttttgataaaaatctccAGACAAATTTAAACCAAattc
ttttagtaaaaaaagaCCTAGAATTTATTTCGAAAAGTATTTTGATTTGT
CATCTTTTAAACGACTGACAGGCGTTCgtttacaaatttcaaaaaatgtt
tttaaggtGGTTAGCGACTTAGTTTTTAgttggattttgataaaaaattt
tagttttatacGTATTTGTTCTTTTTGGGAAAGAAGTTGTGGTGTCCTTG
TAGAAGCGAGCTaatgcaaaagtgttttcagtCGCATTTAGAATGACTAT
TTAGTGGCAGTTTATGTGGTTTAATTCTGGTAAATTTGTGTTTAATTGTT
TTGATTCGTGGCgtattaaatatttttacagCGATGACTAGAAAATTTAT
AAATACATGGCCAATTATAACATAGCATATCCTACTACTAAAGAAAAAAT
GCTTTTGGTTTAAGCTTCGATAACAAAAGAGGACCAAGCGTGTGATTAAG
GATGCCTTTATAGCCTTGCTTGCAAGTAAAgttaatattttcaatatttt
aagaaGTTGATTTGGTCTCAGATTAAGGAGATCAGGTAATTGAACATTAA
ACTTAAAATGTtgagtttaaaaacaaaaatatgcgAGGGGGGATCCTGTC
AATGGATTATGAGCCAAAATATATGTAAATGAAGCGAGTAATAATCGATT
tataaaatttgacaaaatcctGCAAATCATTGTAAATAAACTGATCAACT
AACTCTGGCCCTCTTTTGAAATAGCAATTGCAGAAAATATGCATtcgttc
aaattttttgaatattttgatatttcgcAATGAGGATTAATATATTTTAC
AAACGAAAGGAATGCAACACAAACAAGTCCAAAGTTTCAGCAAAACGTTG
TTTTAGGGACTGGAGTATGTTTGTTTACTTCGTATGTTGAAAAAATCCCA
CGTAAAAGCTCCTCTTACCAACAAACGCAACAAACAAGACTTCCGTAAAT
GGAAGAGATGacataaaaagttcttttgaataAGGTATTTTCTTCATAGT
TAGCATGTAGTCAAACAAATAATGTCATTGAGAAACTTTGTTTCATGGTC
TGTTTGAAATTTACACATGTGTATGAAGCATTTCAGTGATTCTGATTTTC
AAAGCttcaaagggggggggggctgctTCATTTTGTTCAGACTTAATAGt
gcagaaagaagaaaaaaagttggcAGTGGGTTTGATAATACTTGGACATG
AACTTTGTCGGGTGTTTTGTTTTCTTGAGATTTGTTTGATATGCAACGGG
TAGCAGAGCCAATATTCAAACGTATATATTTTGATCAGTTTTGACGTACA
AATgtttagactatgctatagtctaagacgagtttcatctaagaggaata
AACGTGAAGACGGAAATTTTTTACGGGAGTAGCTGTTgtcgtaaacacag
actctatccgccgcgaaacatattacgttctATAATATACAaattatgtt
atatcataataatatattatacggacgatagcatcgtctaacaAATGTTA
TGATGTCATGCACTGCAGAAaagctttcaaattttcagaagcGAGAAACT
TAAAAATGTTTAAGTCAATACTTATATGACCCATCTCGTCTAAGCCTGTT
GTTTGAGGCCTTTTATACTTTAACGGTGCTTATAAGATGATTAGCTTGTG
ATCCTTCGTAAGACGGTAAATGATTCAGGCTTGTTACGAGAGTGTGAAGG
ACATTTTTATTGTCAGAAAGTTCctcaatgttttgatattatcaCGTTCG
TAAAATTGATATTGAATTGGAGTTCCTTTTACATTAGAAAAGTTCTGAAA
CTTAAATAAGACATTCAAGgagatgttttgatttattttcaaaacaaccg
GCATCCGGAAAAGAGGAGAATTTTTATGCGAATTGGAGCGTGATTGAGGT
TTCATTACGGAGATCCAATTATAATACATAANAATTTTTATGCGAATCGG
AGCGTGATTGAGGTTTTATTACGGAGATCCAATTATAATACATAAACAGG
TTGAGGGCCAGAAATATTATGTTTTCAACGGGGTATATGTAGCAGTTATA
AGGTCAGGGATATTTGAGTTTGAACGATTAAACCCAACACCACCTTCTTT
TGTTGTTATAATTACTAGGGAATCGTTTCTCACTAAAAATCTTCCCATTC
CTTTTCAGCTAGAGAACGCAGAAAGTTTAGAAGAAAGAAAACAACTGCGA
ACAGAGCTACGAGAATTACGGCGTAAAATCTTCGAAGCTCCTACAACTAC
GACCACATCAATTTCAGTTACGACAAAAAAGGAACCTGAAGTTTCGAATA
CTAAAGTGAATATCGAGAAAGAAAACGCGAAAAATCTCGATTTGAACGGA
AACAAGAGGATCAGTGTGACGTTGAATACATCTAAACCGACACCTATCAC
CATAGAAACCAAAATCAAAGCGGACACCACTTCGGAACAAGAAACAGAAA
AGCCACGAACAACTTCATCAGAGTCATCCACTACTTCCAGCAACAACATG
AGCAGCAGCGTTGCGCGACGATCTCGACTTTTCCAAACAGACGATAACAA
CAATGCATCAAAAACAGAATCTTCTGCTCCACAAGCAAATGGAATCAAAC
TCAAAATCAACGATGGTGGTGATAATACGCCCACGCTCCGTACGCGCGAC
CCGGCCGATCGGGCCGCACGCAGAGCTAGACGCGCACAACAGCAACGTGA
GATGAGTGTTGACCAAGGGAATACTGAAACGAACAAAGAAGAAGCGCCAA
AACCGACAGAAACGGTCATCGTTGAAGCGccaaaagaagagaaaaaggaA
GAACCAAAGACGACAACAGAACAGAGGAAATCGACGAGCACTCTTTCCGT
TGGAGGAACGGNAAACAAAGAAGAAGCGCTAAAACCGACAGAAACGGTCA
TCGTTGAAGCGccaaaagaagagaaaaaggaAGAACCAAAGACGACAACA
GAACAGAGGAAATCGACGAGCACTCTTTCCGTTGGAGGAACGGGTACAAA
GAACACGGGGTCAGCAGGATTAAGAAGAACTGCAACTTGGGGTGCTAAAG
ATAAAAATGGTGCAGCAAATAATATCGGGAAAGCGTTAAACAAATTCGGA
CCACAGGTATGAGAGCTTTAACTTTCTCTTCTGCGACTAATAAATACTAA
CATGATCATCTTTTTAAGCGATACTGATGTTAAATGGACTAACCATCTTT
GGAACCAAGTGACTAACATGTTGAAGTTGCGGATGTTGTGAGCTACACTG
ATTGCTTTGAAATCATTACTCACATCCATTTCAATACACACATTCATTTC
ATTCATTCCATGTCACTCATGCAAACaaacacaaattttcatttccatCT
TCAAGCAAAATTAGGTCATCTCCAGCGTTTTTCATTTGTGTAGATCCAGA
GGTTGCATAATTGAAATAAACTTCCTTTTATCcattcatttattcattca
taTTCACTTGAACATTCATCCATTCAACCACGCCTTTTAATTAGCCGTCG
TTATTTGAACACtactgtctcacagccccggtggaacttttttcctaata
ctcctattgaaatcctaatggcgatagaaattctatttttccaaggttaa
aaaatccatttggatggttttgaagtgcaatttttaaacatggaatttcg
agtggggatgaaatcaaagtcaatatcCCAGTGGGGCTTAAGTTCTTAAG
GGTATTTTCAcaccgggacgaaatttttgcttaattttctagtggggctg
gggtcccagcgggtctgtgacacaggggtgttttgagACATAATGATTTC
CAAATCTCTCACAACATATCACATCTTCATCCTCATTGATCTCTCTCTCT
GTTTCACTAATCATTCCAATACACTGAAATAAGTTATATTTTTAAATAGC
ATAACCCACCCTGCActatttttttcgcttttttttcaaaaaaatataca
cGTGTCACACCTTTTGAAATGTTATGAAAACTAGCTTTTGATAATATGTT
GAACATTCTTTTCTAGAACAAACTCTGAGACAATGCATGATCAAGCAAAC
TTTATTTGCACTTCTCTGTATCACTTCGTATTATAAATATGCACATATaa
tcaaaaacatttcttttttgcACATCACCACCTCATACAGCTTGGAGAGA
GCACTCCTTTTCAATTTGGCACCGACTATACAAAGAAGAACAATACGCCC
AAACCTGAAAACACGCCCAGATCTTTCAACAAATACACGCCCGGAGTCGC
CACTGTTAAAGCCCCGTACACACCAGTAACCAAATCAGAGACAACGAACG
CACATTCGAATGGGAGCGTTGAAAGTACAGGCGCACGCCGACCCTCATTT
AATAAATACACGACACCTGCCATGAACTTTAAGAACTCTCAAgctataaa
agaaaatttagacAGTTCACAAGAGCCACAAGAGTCCAAAGTGTCTAGTG
ACGTTGGTACGGCTTTTGTACCGAGAAAATTCTCTCCCACTAAAGACATT
ATGAACCAATTGGAGAAAAATAAGTCAAGCACATCGACACCCAGTTATAA
TAAATACACACCCAATAAAAATCCGGATAGTGGTTTAAACAAAGTAAGCC
GGTCAGTTTCAATGTCTGCTTATGAGAGGAACCTGAAGAAAACACAAACA
CCTCCTGAGCCTTCAGTGTCTTATAACAAACTGAACAGATCTATCTCGGA
CTCTACCAATGTTACAGGACTTAATCGAGTTGGAACGAACAATCTAACCG
GATTGAATCGGGTTAATTCGAACAATTTGACCGGTTTAAACAGGGTCGGT
AGCACAAATAGTGCAACTGGTTTGAGATCTGTTAGTGAAGAGGTAAGTCT
TCTTCATTATAAGACGATTAATATACGGTTTGATAAAGTTTCACAAGCGT
TTATTTATGCCCTTTATGGTTTTTAATCTACGGTTTGGTAAAGTTTCACA
AGCGTTTACGCCTAACATGTTTAACAAGTCTagtgaaaaaaatttctgtC
TGTTATGAATCCAAGCATCGACATTTAACGGCCTCAACGACCGTAAGAGA
TCTATGATTTATAGGGTTCTCAAATCTCGTTCATATCTTCAATAAGTCTT
GTAAATTGTAAGCACTAGTTGTCTTCACTTTTATGATTGTCAATTAAAAT
TTATTTCTCATTTAGAGTAATTCTTCATCAACGACAAAACGACCCGTTTC
CTCGTACGGTGGTGGTGGCAGATTTGCAAATTTGTAAGTTCGCGTAATGT
TTGATGTGTCACTCCTCTTGCAAAGTTCACTTTCGTCGTCATGCTTGTAA
ACTTAACCTAGGTTGTATTAGGGTTAAAAAAGTCCTAAATTTTATATTAT
CAATGTTTCATTCTTTGCTTGGAAATATTGAATGCTGTTTGTTGTTAGAC
GGTTTATGGTAAATATACCGTTCCCTTATTCTATTCACACCAGGAGCTCT
GACCCTGTTCCGCCACCACAACCCAAACCAGAACCACCAAAGCAGAACGG
AACGCCTTCTTTTGGTAACCCAACTGGTACCCAATCAGCGGCCGATCGAA
TGGCGTATTTCAGACAAGCAGCAGAAGCAGAGAAGAAGAAGGTGGAAGAA
AAGAAGGCGGCGGCAGAAGCGCGACAAAAGCAACAAGAAATGTTGAACGC
TGTGATGAATGGAGAGGTCTCCATGGGTAGCAACAAGAaagaggaagaag
aaaaaacaccAGCTACACGTAAAGAGAGTAATGAAGGGGGCGCCAAGAAA
GGAGGATCTTCTGCGTAAGTTATCCATCACTTGTGCTGTTTATTTGATTA
AGTAAAAATCTAAACAGCTACAAGTGACTTGCGCTCGTTTTATTCAGATT
AGCTTTTTTACATTCCATAACTATCTTCCATTTCAGGCCATGTAAGAGGC
GCGAGAAAAAGAAGGTTACCCGTCGAACGATGTCCATCGGAAGCATCGTC
CTCGATTGGGTGCAAGAAATGATCAAAGATTATCCAGTGGAAGTGACCAA
CTTCTCCTCCAGTTGGAACAATGGCATGGCTTTCTGCGCACTCATTCACG
CTTTCAATAAAGATGAGTTTGATTTTAGTGAGCTCAAACCGGAAAACAAA
CGCTACAATTTTGATTTGGCATTCGACACAGGATAGTAAGTGTATTTCTT
TTAGTATTTCATTGCTTTTGTTCTGCAGGCCTTTGGCCTCACCGTATCTG
GATAAGGTATCATTCGCCCATAAAGTAGCAAGACAGGCCTTTAACGGACG
GATAATCTACAAACTAATCAAAGAACATAAGGAAGCCGTTTTCAAACTAG
CCGCCCATAAGATTAAGAAGACGAATTAAAAGTGGGAATTCGATTTTAAC
TCAAACATTGTGAAAANCAATAAGATTAAGAAGACAAATTAAAAGTGGGA
ATTAGATTTTAACTCATACATTGTGAAAAATTTGTTCAACTTTATTGACG
TCTGTTGAAGTCAATGAGTTTAAATTTGGgctttataatttattttaaat
ttgacgaatttttgaaaatccacCCATGAGTTGTTTTTTCAACTTTGCTT
TTTCATTATGTaactattttcgaaaaaaaaaatttatgataaTACCCCAC
TCATAGAACTCCATCAAAAGTTATTCGCACTTGTAATTTTACTGATAACT
AATTTGAAAATGACTTAAGTATCGTGACATTAAGACATCATACCAGATGT
AGAAGGAATTGAAACTAAGAAACGTGTCATCACGCAAGAAAATTTATGAT
AATACCCCACTCATAGATAACTCCATCAAAAGTTATTCGCACTTGTAATT
TTACTGATAACTAATTTGAAAATGACTTTAAGTATCGTGACATTAAGACA
TCATACCAGATGTAGAAGGAATTGAAAATAAGAAACGTGTTATCACGTTT
GAAAAAAGACCTAATCGTAATCAAGCATCAAACTAAACCGTTGGGGGCTT
CtagaaagaatttctttttaaaaagatcTCCAGTAAAATTTTCCTGTTTA
TGTTTCAGTAAAGTGAAGAAGATTCCAAAGTTGTTGGACACAGATGATAT
GGTTGCTATGGCTCGTCCTGAACCCAGGAGTGTTCAAACCTATATTCAAT
GGATTTGGAGTGTTTACGGACCAACCTCTGGGTACGGGCCTACCCCACAA
GAAgtacaaaaatgaaaacataaaaaGTCTTTGTTAGAAAATACTTTGGA
AAAGATGATGGATGGCAAAATTATCcacaaatttcagaaaaaaatagagA
GACTTGTAGTGGAATTGACGGGTGCGACTGAATTTCCCAGAAGTTTTGAT
GGCTTGAGACCTCTACAATACAAACTGAATACATGATAGATGAAACCTCA
TAAGTGAGCAAAGCTGAATAGACGacttataaattatttttcttcttcga
tTTCTTTCTGATACAATTTTTCTCACATTTGTCTGGTTTGAAAAGCTTTT
GATTTATACgagaaagaaatttatttctAAGTTAAAGAGTTTCGGTAAAA
CTAATTTGTTTATGAAGCACTGAAATCATACGAAGAACCAACTTTAACTT
TTTCGTgtatataattattttatccTCGATATTTCGTTGATGCTTTTTGT
ATATACATTCTTCTtctaaatttattgtaaaattaTTGAATAACACTTTC
CTTTCCCTTCTTattaattttcccaaaattacaataattttagttttatg
aatatacttaaaaaaaaagttttatacgATTTTATATTCGACAAAATTCT
TATGTTGACTATGTTTATTTTGACTAATAGAAACGGAATAGAAAATTATT
TAAGTTTGAGGAGACCGGATTTTTCTCATCTAAAAATTGCTTACAAAAGG
GCTGACCCTTTTTCAATTACCCCTTCCCCCTTTATAACCTTCAGGTGACA
CCTtgctgtcagaaatgtcatcattcTCAAAGTGTGGatatttttag

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004709	XLOC_004709	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000085	supercontig	sc0000085:119232..137078 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.308431	0	48.3379	51.8888	52.3266	64.4695	20.1709	48.2133	0	0	0.14969	0.0554812	0	0	0	0	0	0.41399	0	0.347221	0.262096	0.503532	0	0	0	0

Blast

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BLAST of TCONS_00008387 vs. Swiss-Prot (Human)
Match: SMTL1 (Smoothelin-like protein 1 OS=Homo sapiens GN=SMTNL1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.446e-27
Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 2

Query: 2648 IGSIVLDWVQEMIKDYP-VEVTNFSSSWNNGMAFCALIHAFNKDEFDFSELKPENKRYNFDLAFDTGYKVKKIPKLLDTDDMVAMARPEPRSVQTYIQWIW 2947
            + +++L+W + M K Y  V++ NFSSSW++GMAFCALIH F  D FD++EL P  +R+NF LAF T  K+    +LLD DDMV +A P+ + V TYIQ ++
Sbjct:  343 VKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDYAELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLAVPDSKCVYTYIQELY 443

The following BLAST results are available for this feature:

BLAST of TCONS_00008387 vs. Swiss-Prot (Human)

BLAST of TCONS_00008387 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SMTL1	5.446e-27	49.50	Smoothelin-like protein 1 OS=Homo sapiens GN=SMTNL...	[more]

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TCONS_00008387 (transcript) - C. hemisphaerica