TCONS_00008276 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008276
Unique NameTCONS_00008276
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1494

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008276 ID=TCONS_00008276|Name=TCONS_00008276|organism=Clytia hemisphaerica|type=transcript|length=1494bp
ttttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGC
AGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGCG
ATGTTCAAATACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAAT
TATTACACTCATGGATAAACTTCTACGCCGAGAAAACTTAGACTTAAAGC
TGAAACCGTACAATGTGCTGGCAACCAGTATCACAGAAGGAATGGTGCAA
ATCATAGAATCAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGATC
CATACAGAGCTACTTCCGCGAAACGAACCCATTAGAAGGTGCTCCGTACG
GTATAAACCCCGAAACCATGGAAACGTATGTCAAGAGTTGCGCTGGTTAT
TGTGTGATAACGTACATATTGGGTGTTGGAGATCGCCATCTGGATAATCT
ACTTCTCACCAAATCAGGAAATTTATTTCATATTGACTTTGGATATATTC
TTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTAAGCAAAGAA
ATGGTTGAAGGCATGGGAGGAACAACAAGCGAATATTATCAACAATTCCG
TAAACTTTGTTTCACTGCATTTCTTCATTTGAGAAGGTACGCCAATCTAT
TCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCCCTGATATCGCT
CTCGAACCTGACAAAGCAGTCAAAAAGGTTCAAGACAAATTTCGTTTGGA
TTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGCCTTGATTGATGAAA
GTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGCTTCATAAGTTTGCA
CAGTATTGGAGAAAGTGAAGGGCTGAACATCCGACGATTTTGATTTGGAG
ATATCTGTGTGGATGTAACAAGTTAACGCCTGTAACAGTATTTCTCACGG
CGTTGATGTCTACTGACGATCATCTTTTTATTACGACTTGGTGAAATACG
TGCCTAGCATTTGGCTCTCGTTTTATGGAGTATGTATTATACATTTTTTC
ATCGTAATCGAAGAacaatttctaaaaaaactgTTGGAATATCGTCGTta
acaaactgaaaatttgacttCTTACTTTCCTGAGACTGGAATTACAACAA
TAACTAAAATATTTTGGTTTATTCAAAAGAAATCCCATTATTGAGGTAGT
TTTATTagcaatttaaaatttaaattaaaagtaATAACTTATGTCGTTTC
TTTTCCGTTATTTCCAGAGACACCTTAATTATATCAAGCTTCTATTATAT
TATCAGCTCCTTAagtaaatcaagtttttttcgtttgtttgttTGATCAG
GAAAAGAGATTGCTACGGTTTGGTTTTGGtaaacttttcattttatagaa
attagaaaatcaattttgttatttttaatttctaatttattcttgaatta
attttgcgaaaaatattttgtataaacaaaaaaattggaaaagt
Run BLAST on NCBI

protein sequence of TCONS_00008276-protein

>TCONS_00008276-protein ID=TCONS_00008276-protein|Name=TCONS_00008276-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
FDISLSDKASIFKSALQPIKLTFRTIQNKDYVAMFKYGDDLRQDQLVLQI
ITLMDKLLRRENLDLKLKPYNVLATSITEGMVQIIESTNVAHILSSYDGS
IQSYFRETNPLEGAPYGINPETMETYVKSCAGYCVITYILGVGDRHLDNL
LLTKSGNLFHIDFGYILGRDPKPFPPPMKLSKEMVEGMGGTTSEYYQQFR
KLCFTAFLHLRRYANLFLNLFSLMVDASIPDIALEPDKAVKKVQDKFRLD
LSDEEAVQYLQALIDESVNAVFASLTEQLHKFAQYWRK
Run BLAST on NCBI

transcript from alignment at sc0000084:303511..310337+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008276 ID=TCONS_00008276|Name=TCONS_00008276|organism=Clytia hemisphaerica|type=transcript|length=6827bp|location=Sequence derived from alignment at sc0000084:303511..310337+ (Clytia hemisphaerica)
ttttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGC AGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGTA AGATTTTCCTtatttcttttctgtttttcattgttttgtctCAAAGGGAG AGAAAAATTCCTTGGTCAGCTCTTCTGAATCCTATATTAGCGACAGCAAT CAGAGCGTCAGATGATTTGCGCCAATAAAAAGAACGCTCATCGGGAAAAT GGCTTCTTAATAAATTTCtcttactttaagggcagaaactttcgcgtttt tcgcgacTTCGATCCtttttcgcaaaagtttctggcaggtaagaaattaa acctgaaaaacgcgaaagttttttttcgcgaaaaataaactttcctgctc agttttgcactgtttgctatatttttgcgtgttttatgagtttttattac caaaaaaggtaaattctATATGAATTCGCAAAAATAtgtgaaatttcggc taaaaccataattcgcgaaacttaaattcgcaaaatttcgcgactttttg acttcgcgaaactttctgcccgcgaaaatttctgccCTTAAAATAGTAGG GGGCAATTCTTATGATCCTGAGCATCTTTCGGGGGACTAAACCGCATGTT ATTGGTTCGAAAGAAGATAAGATATGTATTTTCTTGAGAAATTTCTACCA ATCAAAATGATATACTACATGAGTCAAATATATTAACAAACATACtttta tataaatttttgattaaaaaagagaacaatgaaacacctgaaaagaccaa aattttcaaaattttcttgagaAATGCGGCTAGCAAAAGTTCTTAAGGCC AAAAAACTGACGTTGTAAACAAAATTCCTACCCCCTCCCCAAAATAGGCg aaaaattgacgatttttcAAACGTTGTAGTTTCCTAACCTAAAAACCCTA GtgatttttgttaatatttttgaatttatctCGTTCAGGCGATGTTCAAA TACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAATTATTACACT CATGGATAAAGTAAGCAAatatctttttctaaatacatAGACTAGCTTAT TTGCTATCAttgaagggctagaggcgagactcttggatgggaaatgaaac tacttatttcccatccagaacgcccgcgcgtagttttacacaaacgccgg attgaaactaaaatctatcactagatttaaaaaaaatgtagtcctccaaa acaaaggaaccactagatataATCTGTCGTCATGATTACCACGCGTTCTA ttcgcgttttggatgggaaataagtagcttcaatttctATTGCCTGAGNg acgcgttctatgcgcgttttggatgggaaataagtagcttcaatttctAT TGCCCgaaaagggttaaagtttcgcctctagcccttcgggcttgaaactc aatgttcgCTATGACGGGACAAGTTTAGTCCAGGATTTGGTCACCTAAGG TAATTACCGAAGTACGAGGCGGCCTCGCTACGATTCTTATTCTGCTCGAT TTTACAACTTTCTAATCAGGAGTCATGCGTGCTACCACTCAACTCATACT CCCTAACAAGAGTTTAAACCACTTTTCTCCCTTAGCTTCTACGCCGAGAA AACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTATCAC AGAAGGTAATACTTTAGTTATTTTTAGCAAAGGCCGTGTGGTATTAGACG CTGATGAATGTCCAACCTAATAGATGCTGGATCAGTTGGTCGTGGACAAT CAAAAGCCTAAGTTAAAGTCCTCTATTTACTAGAAATTATCCACggaaaa tatcgactctatcaaGCTAACCTTTTTTTCTAATATTTATAATTACCTTT TCTGTTTGAATTAGACACCAAcctttttggttgattttttactttctaAA GGAAACCTCTACTTATGTGCCTTCTGTGTCAGCAATCCAAACTAAAAAGT TTTCTATAAGAACCAAGTCTCAATTTTGGACAAAACGCAGTCAATCCCAG ACTCCGATTTCAGGAATGGTTAAAGAAAAGCTGATTTTAAGCgcctttta aatctttaaattgACAAAGTAAGCATATTAAGGAGATTAAAgcttaaaaa taatgaaaaattaagcAGCAGtgcctcagcaaaattttactggttcttat aaaagaaagagtTTAACTAGGCTATGTATTTATTCCATGAAGTATTTGTC TTTTAAATTAATCTTTTCTAATCTTTCAGGAATGGTGCAAATCATAGAAT CAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGATCCATACAGGTA CCATGTCTAaaatctctataactcgaaattgtCTGAGTTATGAGGAGTTC GAGATTCAAATTTGATCCTGCAGAAACCATGTCTCGTTTTCCCTCATTCC TAAAATAATGAGATATTCACCTATCTTGCAAGAAGtctaattttcgaaat ttcctaAAACACCAAGAACAAGTGCCTTATTGATTATGAAGGTTTATTTA GCGAGGCATCTGTTGATTTTCAAAGTCAGTAAAGAAATTGACAGAAAgtc tttatttaaaaattaaGCATAAGCTTTTCGACAGTTTTCATCTTCAGTGC AAATGATTTGCCTTATTGTATGTACTTTATTCGTTAGTGATTCACTTACT TTTTTTCCAACTATACTTTCTCTACAGAGCTACTTCCGCGAAACGAACCC ATTAGAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATG TCAAGAGTTGCGGTGAGAATCtttttgatcttattttttcgaTATCTTAT GATTTTAACTCGAATAACCTATCTGTAGTATCATTTATGACCTATGAAGT TGATCACTGATTAGCAGACAGAAAGGCAATGTCAATGCCTATCAATATGA AATATATGTTCAGCCCCTAAACTGCCAAATTATTAAGTTAGATTCCCCTG AATTTGTGTGCTCTTATGCAAAAGTTTTAGTATAGTGATGATGTTTACTT ACTTTATTTTTGTAGCTGGTTATTGTGTGATAACGTACATATTGGGTGTT GGAGATCGCCATCTGGATAATCTACTTCTCACCAAATCAGGTAGAGAACC TTAAATATACGGATGATTTTCCTTTCCTAAGTCTCCCATCCAACCCAAAG CAACATATCTATAATTTCGAAATATCGGAGTATCTGTTAGTGCGTCAAAC CTGTTATTCTATCCCGCTGACTTCGTCTCATGACCATTTATATATCGTAT CTGCCTTATTTGGGGAAAAAATAACAGTTGTGTAGACAGGGGTGAAGAAC GATCTGCGTAGGAGTGCAGATCTTTAGGACAATCAGCGACAATGGCACTT ACCTATTCATTATATGAAAACATATTTACTGTGTCGTTAAAACATGCTCT CCTAAACAACTGTTccttcacccctgtctacgctactgaatAAAGCTAGG TGTAGCAACTGGGGTAGTaactgaaaattttcaagatcAAAATTTTACGT GGTAAATCTTTAAAAGTATGTTATTTGAGCTGATGACATGAAAAACTCGA CCAATGCCTTCTTTTATAGTATATTATGTTTTCCAGGAGCGTTAATTCAG TATGTTTTAAAGTTTCACTTAAATGTATAAATAAGTCTTTTGGGCTTCAA TTATTCCCCTTGTTTTTCATTTCCAGGAAATTTATTTCATATTGACTTTG GATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTA AGCAAAGAAATGGTAAGCGCCTTcttaaaggtttcatttttacataagtg ttcccgtctCTTATCAGGCACATGTCTCATATTAGAACGatgtctaccta ttgttatatcatGCTGATATAAATTTTTTCCTCCTTCGGACCAATCTTTC TCCATATTCTTGTGAATTCAATATACAAaggcttgtaaattaaaattgac gagtaagaaaacgatatcactctattatttaaaaacaaaacttttacaGA CATATCAGACAAGCTTTGATATATTAACCTGgttatctttctttttcaaa cggTCTGCGTCAACCAGCTCAAATGGGCTTTCTGGAAAGTTTTGACATac tgataaaaaattaataactTTGAATAGGACAGTTTCAATGAAAGAATAGC TTaaattttcttctattttcatCAGGTTGAAGGCATGGGAGGAACAACAA GCGAATATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCAT TTGAGAAGGTATATTTATGTATTGTTACTCGGGAATTTCCAGTGTCTAAT GGTAATTTTGCCTCGACCCCCGTCAAATATATCTTCATCTTGTTACTTCT CCTTTTAAAAATTCTGCCGTATAACTATTTGAGTTAACAGTTGGGGAATT GATCCGACTGTAAAACTAAATTTTCATCTACGCTGGTATCATCAGatttt gaaattcagaaaagtaTGACTTCATAATGGTAGGCGACGAGGAGTGTTAT AAGAAATAACCTATAATGCTTTCGTCACTATCTGAAATATTGTTCAAcca atggaaaatattttttagatctCGTCGTTCTTTTGTATACTTAGAACAAG ATCCCAATGCAGGAGATTGATTACCACTCCTCTATTTCTCATTCTAGGTA CGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCC CTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTACAAATGCTT tcgaaatttcttatttttgcgTGGAGAACTCAGTTGTATAGCGACTCTCT CCTGCCACCCTGGAACAGTTAGTCTGTACAATCCTGAGCTCTACAAGCTT TTTTCAAGTTGAATAAAGCATTCAAGCTGATTTCCTTCCGTCTTCTTGGT CAACTGACGGTATATGTGCGGCGtaaaaattgacttttgaaTTCACAGCC TTACAACGTAGCAAAAATCGTTACAGTACAGCTAATAAGTACAAATTGCT GACCCTTTTGCATCAGAGTCAGTTAAATTTCAACTCTCTATAGAAAATCC ACTTTTACAGTACATTTCTGATCTCTTGAAAAACACGCCCTGAGCTGCCg tacatacccgtcggtcaataaTTTGTCGGATGAGATTTAATTCATTTTCG CTTCCTAGGACTTAATTTAGCGGaatattttttaatctttgtctTAAACA ACTCAGCCCTATTCACTACTCATCCATAACACACATATtaaagttgtttt ttataatgTACAAACCGTCGCTTTCGTTCAATACTTCACAGGTTCAAGAC AAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGC CTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGC TTCATAAGTTTGCACAGGTATGAATAGTAAGGAAGTCTGTGCCCGCaatc ggaggcgacccgaaggctcctctttcgatagctatctacccgaagttAAG GGAGAGCGGCACTtattctccctggattgctccacttacccttgactcCT GTTTTAATTACTGAGCATCAAGTagagagaggcatcaagtaccNCGAATA GTAAGGAAGTCTGTGCCCGTaatcggaggcgacccgaaggctcctctttc gatagctatctacccgaagttAAGGGAgagcgccactctttctccctgga ttgctccacttacccttgactcCTATTTTAattactgagcatcaagcaga gagaggcatcaagtaccattttgggagtCTTTGTTATGACCCGGTCGGGG GTCGAACCCACCACCTCGCGTACCGTAAccagatgctctaccactgcact acggtggAATACGGTACGAATAGTAAGATTGATACTTTAGCCGGATGGCT TTCTAACCTTCTTATAGTAAACCCTAGAATCCTGGAAGGTTAGCTCCCGA CAATGCTTATTAAGTAAAGGGTAGGCTAGGTTATGGTGAAGATTTTGGGT ACTTTGAGAAGCATAAATATTCAGGAATAAGATTAGGGGAAGGTCAAGGC TATCTTTAAAATGTAGTCACAGGTCACCcatatcatttttttctgagacA CCACAGTCagcgtttttctttttcaattttccttagTATTGGAGAAAGTG AAGGGCTGAACATCCGACGATTTTGATTTGGAGATATCTGTGTGGATGTA ACAAGTTAACGCCTGTAACAGTATTTCTCACGGCGTTGATGTCTACTGAC GATCATCTTTTTATTACGACTTGGTGAAATACGTGCCTAGCATTTGGCTC TCGTTTTATGGAGTATGTATTATACATTTTTTCATCGTAATCGAAGAaca atttctaaaaaaactgTTGGAATATCGTCGTtaacaaactgaaaatttga cttCTTACTTTCCTGAGACTGGAATTACAACAATAACTAAAATATTTTGG TTTATTCAAAAGAAATCCCATTATTGAGGTAGTTTTATTagcaatttaaa atttaaattaaaagtaATAACTTATGTCGTTTCTTTTCCGTTATTTCCAG AGACACCTTAATTATATCAAGCTTCTATTATATTATCAGCTCCTTAagta aatcaagtttttttcgtttgtttgttTGATCAGGAAAAGAGATTGCTACG GTTTGGTTTTGGtaaacttttcattttatagaaattagaaaatcaatttt gttatttttaatttctaatttattcttgaattaattttgcgaaaaatatt ttgtataaacaaaaaaattggaaaagt

Coding sequence (CDS) from alignment at sc0000084:303511..310337+

>TCONS_00008276 ID=TCONS_00008276|Name=TCONS_00008276|organism=Clytia hemisphaerica|type=CDS|length=9537bp|location=Sequence derived from alignment at sc0000084:303511..310337+ (Clytia hemisphaerica)
tttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGCA
GCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGCGA
TGTTCAAATACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAATT
ATTACACTCATGGATAAACTTCTACGCCGAGAAAACTTAGACTTAAAGCT
GAAACCGTACAATGTGCTGGCAACCAGTATCACAGAAGGAATGGTGCAAA
TCATAGAATCAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGATCC
ATACAGAGCTACTTCCGCGAAACGAACCCATTAGAAGGTGCTCCGTACGG
TATAAACCCCGAAACCATGGAAACGTATGTCAAGAGTTGCGCTGGTTATT
GTGTGATAACGTACATATTGGGTGTTGGAGATCGCCATCTGGATAATCTA
CTTCTCACCAAATCAGGAAATTTATTTCATATTGACTTTGGATATATTCT
TGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTAAGCAAAGAAA
TGGTTGAAGGCATGGGAGGAACAACAAGCGAATATTATCAACAATTCCGT
AAACTTTGTTTCACTGCATTTCTTCATTTGAGAAGGTACGCCAATCTATT
CTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCCCTGATATCGCTC
TCGAACCTGACAAAGCAGTCAAAAAGGTTCAAGACAAATTTCGTTTGGAT
TTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGCCTTGATTGATGAAAG
TGTGAATGCTGTCTTCGCCTCACTTACTGAACAGCTTCATAAGTTTGCAC
AGTATTGGAGAAAGTGAtttgacaTTTCTTTATCAGATAAAGCAAGCATT
TTCAAATCAGCGTTGCAGCCCATCAAACTGACGTTCAGAACGATTCAAAA
CAAGGATTACGTTGCGATGTTCAAATACGGGGACGACCTGAGGCAGGATC
AGTTAGTTCTACAAATTATTACACTCATGGATAAACTTCTACGCCGAGAA
AACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTATCAC
AGAAGGAATGGTGCAAATCATAGAATCAACAAATGTCGCTCATATTTTGA
GCAGCTACGATGGATCCATACAGAGCTACTTCCGCGAAACGAACCCATTA
GAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATGTCAA
GAGTTGCGCTGGTTATTGTGTGATAACGTACATATTGGGTGTTGGAGATC
GCCATCTGGATAATCTACTTCTCACCAAATCAGGAAATTTATTTCATATT
GACTTTGGATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACCCAT
GAAACTAAGCAAAGAAATGGTTGAAGGCATGGGAGGAACAACAAGCGAAT
ATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCATTTGAGA
AGGTACGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGCGTC
AATCCCTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTTCAAG
ACAAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTCCAA
GCCTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGAACA
GCTTCATAAGTTTGCACAGTATTGGAGAAAGTGAtttgacaTTTCTTTAT
CAGATAAAGCAAGCATTTTCAAATCAGCGTTGCAGCCCATCAAACTGACG
TTCAGAACGATTCAAAACAAGGATTACGTTGCGATGTTCAAATACGGGGA
CGACCTGAGGCAGGATCAGTTAGTTCTACAAATTATTACACTCATGGATA
AACTTCTACGCCGAGAAAACTTAGACTTAAAGCTGAAACCGTACAATGTG
CTGGCAACCAGTATCACAGAAGGAATGGTGCAAATCATAGAATCAACAAA
TGTCGCTCATATTTTGAGCAGCTACGATGGATCCATACAGAGCTACTTCC
GCGAAACGAACCCATTAGAAGGTGCTCCGTACGGTATAAACCCCGAAACC
ATGGAAACGTATGTCAAGAGTTGCGCTGGTTATTGTGTGATAACGTACAT
ATTGGGTGTTGGAGATCGCCATCTGGATAATCTACTTCTCACCAAATCAG
GAAATTTATTTCATATTGACTTTGGATATATTCTTGGTCGCGACCCAAAA
CCTTTTCCACCACCCATGAAACTAAGCAAAGAAATGGTTGAAGGCATGGG
AGGAACAACAAGCGAATATTATCAACAATTCCGTAAACTTTGTTTCACTG
CATTTCTTCATTTGAGAAGGTACGCCAATCTATTCTTGAACTTGTTCAGT
CTAATGGTTGATGCGTCAATCCCTGATATCGCTCTCGAACCTGACAAAGC
AGTCAAAAAGGTTCAAGACAAATTTCGTTTGGATTTGAGTGACGAAGAAG
CAGTCCAATATCTCCAAGCCTTGATTGATGAAAGTGTGAATGCTGTCTTC
GCCTCACTTACTGAACAGCTTCATAAGTTTGCACAGTATTGGAGAAAGTG
AtttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGC
AGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGCG
ATGTTCAAATACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAAT
TATTACACTCATGGATAAACTTCTACGCCGAGAAAACTTAGACTTAAAGC
TGAAACCGTACAATGTGCTGGCAACCAGTATCACAGAAGGAATGGTGCAA
ATCATAGAATCAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGATC
CATACAGAGCTACTTCCGCGAAACGAACCCATTAGAAGGTGCTCCGTACG
GTATAAACCCCGAAACCATGGAAACGTATGTCAAGAGTTGCGCTGGTTAT
TGTGTGATAACGTACATATTGGGTGTTGGAGATCGCCATCTGGATAATCT
ACTTCTCACCAAATCAGGAAATTTATTTCATATTGACTTTGGATATATTC
TTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTAAGCAAAGAA
ATGGTTGAAGGCATGGGAGGAACAACAAGCGAATATTATCAACAATTCCG
TAAACTTTGTTTCACTGCATTTCTTCATTTGAGAAGGTACGCCAATCTAT
TCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCCCTGATATCGCT
CTCGAACCTGACAAAGCAGTCAAAAAGGTTCAAGACAAATTTCGTTTGGA
TTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGCCTTGATTGATGAAA
GTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGCTTCATAAGTTTGCA
CAGTATTGGAGAAAGTGAtttgacaTTTCTTTATCAGATAAAGCAAGCAT
TTTCAAATCAGCGTTGCAGCCCATCAAACTGACGTTCAGAACGATTCAAA
ACAAGGATTACGTTGCGATGTTCAAATACGGGGACGACCTGAGGCAGGAT
CAGTTAGTTCTACAAATTATTACACTCATGGATAAACTTCTACGCCGAGA
AAACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTATCA
CAGAAGGAATGGTGCAAATCATAGAATCAACAAATGTCGCTCATATTTTG
AGCAGCTACGATGGATCCATACAGAGCTACTTCCGCGAAACGAACCCATT
AGAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATGTCA
AGAGTTGCGCTGGTTATTGTGTGATAACGTACATATTGGGTGTTGGAGAT
CGCCATCTGGATAATCTACTTCTCACCAAATCAGGAAATTTATTTCATAT
TGACTTTGGATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACCCA
TGAAACTAAGCAAAGAAATGGTTGAAGGCATGGGAGGAACAACAAGCGAA
TATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCATTTGAG
AAGGTACGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGCGT
CAATCCCTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTTCAA
GACAAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTCCA
AGCCTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGAAC
AGCTTCATAAGTTTGCACAGTATTGGAGAAAGTGAtttgacaTTTCTTTA
TCAGATAAAGCAAGCATTTTCAAATCAGCGTTGCAGCCCATCAAACTGAC
GTTCAGAACGATTCAAAACAAGGATTACGTTGCGATGTTCAAATACGGGG
ACGACCTGAGGCAGGATCAGTTAGTTCTACAAATTATTACACTCATGGAT
AAACTTCTACGCCGAGAAAACTTAGACTTAAAGCTGAAACCGTACAATGT
GCTGGCAACCAGTATCACAGAAGGAATGGTGCAAATCATAGAATCAACAA
ATGTCGCTCATATTTTGAGCAGCTACGATGGATCCATACAGAGCTACTTC
CGCGAAACGAACCCATTAGAAGGTGCTCCGTACGGTATAAACCCCGAAAC
CATGGAAACGTATGTCAAGAGTTGCGCTGGTTATTGTGTGATAACGTACA
TATTGGGTGTTGGAGATCGCCATCTGGATAATCTACTTCTCACCAAATCA
GGAAATTTATTTCATATTGACTTTGGATATATTCTTGGTCGCGACCCAAA
ACCTTTTCCACCACCCATGAAACTAAGCAAAGAAATGGTTGAAGGCATGG
GAGGAACAACAAGCGAATATTATCAACAATTCCGTAAACTTTGTTTCACT
GCATTTCTTCATTTGAGAAGGTACGCCAATCTATTCTTGAACTTGTTCAG
TCTAATGGTTGATGCGTCAATCCCTGATATCGCTCTCGAACCTGACAAAG
CAGTCAAAAAGGTTCAAGACAAATTTCGTTTGGATTTGAGTGACGAAGAA
GCAGTCCAATATCTCCAAGCCTTGATTGATGAAAGTGTGAATGCTGTCTT
CGCCTCACTTACTGAACAGCTTCATAAGTTTGCACAGTATTGGAGAAAGT
GAtttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTG
CAGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGC
GATGTTCAAATACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAA
TTATTACACTCATGGATAAACTTCTACGCCGAGAAAACTTAGACTTAAAG
CTGAAACCGTACAATGTGCTGGCAACCAGTATCACAGAAGGAATGGTGCA
AATCATAGAATCAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGAT
CCATACAGAGCTACTTCCGCGAAACGAACCCATTAGAAGGTGCTCCGTAC
GGTATAAACCCCGAAACCATGGAAACGTATGTCAAGAGTTGCGCTGGTTA
TTGTGTGATAACGTACATATTGGGTGTTGGAGATCGCCATCTGGATAATC
TACTTCTCACCAAATCAGGAAATTTATTTCATATTGACTTTGGATATATT
CTTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTAAGCAAAGA
AATGGTTGAAGGCATGGGAGGAACAACAAGCGAATATTATCAACAATTCC
GTAAACTTTGTTTCACTGCATTTCTTCATTTGAGAAGGTACGCCAATCTA
TTCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCCCTGATATCGC
TCTCGAACCTGACAAAGCAGTCAAAAAGGTTCAAGACAAATTTCGTTTGG
ATTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGCCTTGATTGATGAA
AGTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGCTTCATAAGTTTGC
ACAGTATTGGAGAAAGTGAtttgacaTTTCTTTATCAGATAAAGCAAGCA
TTTTCAAATCAGCGTTGCAGCCCATCAAACTGACGTTCAGAACGATTCAA
AACAAGGATTACGTTGCGATGTTCAAATACGGGGACGACCTGAGGCAGGA
TCAGTTAGTTCTACAAATTATTACACTCATGGATAAACTTCTACGCCGAG
AAAACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTATC
ACAGAAGGAATGGTGCAAATCATAGAATCAACAAATGTCGCTCATATTTT
GAGCAGCTACGATGGATCCATACAGAGCTACTTCCGCGAAACGAACCCAT
TAGAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATGTC
AAGAGTTGCGCTGGTTATTGTGTGATAACGTACATATTGGGTGTTGGAGA
TCGCCATCTGGATAATCTACTTCTCACCAAATCAGGAAATTTATTTCATA
TTGACTTTGGATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACCC
ATGAAACTAAGCAAAGAAATGGTTGAAGGCATGGGAGGAACAACAAGCGA
ATATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCATTTGA
GAAGGTACGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGCG
TCAATCCCTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTTCA
AGACAAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTCC
AAGCCTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGAA
CAGCTTCATAAGTTTGCACAGTATTGGAGAAAGTGAtttgacaTTTCTTT
ATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGCAGCCCATCAAACTGA
CGTTCAGAACGATTCAAAACAAGGATTACGTTGCGATGTTCAAATACGGG
GACGACCTGAGGCAGGATCAGTTAGTTCTACAAATTATTACACTCATGGA
TAAACTTCTACGCCGAGAAAACTTAGACTTAAAGCTGAAACCGTACAATG
TGCTGGCAACCAGTATCACAGAAGGAATGGTGCAAATCATAGAATCAACA
AATGTCGCTCATATTTTGAGCAGCTACGATGGATCCATACAGAGCTACTT
CCGCGAAACGAACCCATTAGAAGGTGCTCCGTACGGTATAAACCCCGAAA
CCATGGAAACGTATGTCAAGAGTTGCGCTGGTTATTGTGTGATAACGTAC
ATATTGGGTGTTGGAGATCGCCATCTGGATAATCTACTTCTCACCAAATC
AGGAAATTTATTTCATATTGACTTTGGATATATTCTTGGTCGCGACCCAA
AACCTTTTCCACCACCCATGAAACTAAGCAAAGAAATGGTTGAAGGCATG
GGAGGAACAACAAGCGAATATTATCAACAATTCCGTAAACTTTGTTTCAC
TGCATTTCTTCATTTGAGAAGGTACGCCAATCTATTCTTGAACTTGTTCA
GTCTAATGGTTGATGCGTCAATCCCTGATATCGCTCTCGAACCTGACAAA
GCAGTCAAAAAGGTTCAAGACAAATTTCGTTTGGATTTGAGTGACGAAGA
AGCAGTCCAATATCTCCAAGCCTTGATTGATGAAAGTGTGAATGCTGTCT
TCGCCTCACTTACTGAACAGCTTCATAAGTTTGCACAGTATTGGAGAAAG
TGAtttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTT
GCAGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTG
CGATGTTCAAATACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAA
ATTATTACACTCATGGATAAACTTCTACGCCGAGAAAACTTAGACTTAAA
GCTGAAACCGTACAATGTGCTGGCAACCAGTATCACAGAAGGAATGGTGC
AAATCATAGAATCAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGA
TCCATACAGAGCTACTTCCGCGAAACGAACCCATTAGAAGGTGCTCCGTA
CGGTATAAACCCCGAAACCATGGAAACGTATGTCAAGAGTTGCGCTGGTT
ATTGTGTGATAACGTACATATTGGGTGTTGGAGATCGCCATCTGGATAAT
CTACTTCTCACCAAATCAGGAAATTTATTTCATATTGACTTTGGATATAT
TCTTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTAAGCAAAG
AAATGGTTGAAGGCATGGGAGGAACAACAAGCGAATATTATCAACAATTC
CGTAAACTTTGTTTCACTGCATTTCTTCATTTGAGAAGGTACGCCAATCT
ATTCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCCCTGATATCG
CTCTCGAACCTGACAAAGCAGTCAAAAAGGTTCAAGACAAATTTCGTTTG
GATTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGCCTTGATTGATGA
AAGTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGCTTCATAAGTTTG
CACAGTATTGGAGAAAGTGAtttgacaTTTCTTTATCAGATAAAGCAAGC
ATTTTCAAATCAGCGTTGCAGCCCATCAAACTGACGTTCAGAACGATTCA
AAACAAGGATTACGTTGCGATGTTCAAATACGGGGACGACCTGAGGCAGG
ATCAGTTAGTTCTACAAATTATTACACTCATGGATAAACTTCTACGCCGA
GAAAACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTAT
CACAGAAGGAATGGTGCAAATCATAGAATCAACAAATGTCGCTCATATTT
TGAGCAGCTACGATGGATCCATACAGAGCTACTTCCGCGAAACGAACCCA
TTAGAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATGT
CAAGAGTTGCGCTGGTTATTGTGTGATAACGTACATATTGGGTGTTGGAG
ATCGCCATCTGGATAATCTACTTCTCACCAAATCAGGAAATTTATTTCAT
ATTGACTTTGGATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACC
CATGAAACTAAGCAAAGAAATGGTTGAAGGCATGGGAGGAACAACAAGCG
AATATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCATTTG
AGAAGGTACGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGC
GTCAATCCCTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTTC
AAGACAAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTC
CAAGCCTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGA
ACAGCTTCATAAGTTTGCACAGTATTGGAGAAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004651XLOC_004651Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008276-proteinTCONS_00008276-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008276-exon-sc0000084-1491911889:303511..303607TCONS_00008276-exon-sc0000084-1491911889:303511..303607Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:303511..303607TCONS_00008276-exon-sc0000084-1510915933:303511..303607Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:303511..303607TCONS_00008276-exon-sc0000084-1575043694:303511..303607Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:304499..304570TCONS_00008276-exon-sc0000084-1491911889:304499..304570Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:304499..304570TCONS_00008276-exon-sc0000084-1510915933:304499..304570Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:304499..304570TCONS_00008276-exon-sc0000084-1575043694:304499..304570Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:305146..305215TCONS_00008276-exon-sc0000084-1491911889:305146..305215Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:305146..305215TCONS_00008276-exon-sc0000084-1510915933:305146..305215Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:305146..305215TCONS_00008276-exon-sc0000084-1575043694:305146..305215Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:305790..305857TCONS_00008276-exon-sc0000084-1491911889:305790..305857Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:305790..305857TCONS_00008276-exon-sc0000084-1510915933:305790..305857Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:305790..305857TCONS_00008276-exon-sc0000084-1575043694:305790..305857Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:306238..306322TCONS_00008276-exon-sc0000084-1491911889:306238..306322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:306238..306322TCONS_00008276-exon-sc0000084-1510915933:306238..306322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:306238..306322TCONS_00008276-exon-sc0000084-1575043694:306238..306322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:306576..306650TCONS_00008276-exon-sc0000084-1491911889:306576..306650Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:306576..306650TCONS_00008276-exon-sc0000084-1510915933:306576..306650Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:306576..306650TCONS_00008276-exon-sc0000084-1575043694:306576..306650Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:307237..307322TCONS_00008276-exon-sc0000084-1491911889:307237..307322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:307237..307322TCONS_00008276-exon-sc0000084-1510915933:307237..307322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:307237..307322TCONS_00008276-exon-sc0000084-1575043694:307237..307322Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:307736..307818TCONS_00008276-exon-sc0000084-1491911889:307736..307818Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:307736..307818TCONS_00008276-exon-sc0000084-1510915933:307736..307818Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:307736..307818TCONS_00008276-exon-sc0000084-1575043694:307736..307818Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:308208..308298TCONS_00008276-exon-sc0000084-1491911889:308208..308298Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:308208..308298TCONS_00008276-exon-sc0000084-1510915933:308208..308298Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:308208..308298TCONS_00008276-exon-sc0000084-1575043694:308208..308298Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:308852..308977TCONS_00008276-exon-sc0000084-1491911889:308852..308977Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:308852..308977TCONS_00008276-exon-sc0000084-1510915933:308852..308977Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:308852..308977TCONS_00008276-exon-sc0000084-1575043694:308852..308977Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1491911889:309697..310337TCONS_00008276-exon-sc0000084-1491911889:309697..310337Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1510915933:309697..310337TCONS_00008276-exon-sc0000084-1510915933:309697..310337Clytia hemisphaericaexon
TCONS_00008276-exon-sc0000084-1575043694:309697..310337TCONS_00008276-exon-sc0000084-1575043694:309697..310337Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:303511..310337 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.8443 12.8693 22.2887 22.5095 13.7015 9.2678 15.3697 17.5127 16.6582 19.0777 17.4823 14.2503 14.1938 16.9906 13.2944 16.1176 15.5653 15.8265 9.86131 11.609 12.1191 12.3043 16.6828 18.2465 22.0245 20.741 8.55582 7.43409 11.6447 11.7705
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000403PI3/4_kinase_cat_dom
IPR018936PI3/4_kinase_CS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016301 kinase activity
Blast
BLAST of TCONS_00008276 vs. Swiss-Prot (Human)
Match: PK3C3 (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Homo sapiens GN=PIK3C3 PE=1 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 5.756e-135
Identity = 209/284 (73.59%), Postives = 243/284 (85.56%), Query Frame = 2
Query:   14 LSDKASIFKSALQPIKLTFRTIQNKDYVAMFKYGDDLRQDQLVLQIITLMDKLLRRENLDLKLKPYNVLATSITEGMVQIIESTNVAHILSSYDGSIQSYFRETNPLEGAPYGINPETMETYVKSCAGYCVITYILGVGDRHLDNLLLTKSGNLFHIDFGYILGRDPKPFPPPMKLSKEMVEGMGGTTSEYYQQFRKLCFTAFLHLRRYANLFLNLFSLMVDASIPDIALEPDKAVKKVQDKFRLDLSDEEAVQYLQALIDESVNAVFASLTEQLHKFAQYWRK 865
            + + A++FKSAL P +L F+T     Y  +FK+GDDLRQDQL+LQII+LMDKLLR+ENLDLKL PY VLATS   G +Q I+S  VA +L + +GSIQ++FR+  P E  P GI+ E M+TYVKSCAGYCVITYILGVGDRHLDNLLLTK+G LFHIDFGYILGRDPKP PPPMKL+KEMVEGMGGT SE YQ+FRK C+TAFLHLRRY+NL LNLFSLMVDA+IPDIALEPDK VKKVQDKFRLDLSDEEAV Y+Q+LIDESV+A+FA++ EQ+HKFAQYWRK
Sbjct:  605 IPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDT-EGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWRK 887          
The following BLAST results are available for this feature:
BLAST of TCONS_00008276 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PK3C35.756e-13573.59Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
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