XLOC_004651 (gene) - C. hemisphaerica

Overview
NameXLOC_004651
Unique NameXLOC_004651
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000084:303511..310337+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004651 ID=XLOC_004651|Name=XLOC_004651|organism=Clytia hemisphaerica|type=gene|length=6827bp|location=Sequence derived from alignment at sc0000084:303511..310337+ (Clytia hemisphaerica)
ttttgacaTTTCTTTATCAGATAAAGCAAGCATTTTCAAATCAGCGTTGC AGCCCATCAAACTGACGTTCAGAACGATTCAAAACAAGGATTACGTTGTA AGATTTTCCTtatttcttttctgtttttcattgttttgtctCAAAGGGAG AGAAAAATTCCTTGGTCAGCTCTTCTGAATCCTATATTAGCGACAGCAAT CAGAGCGTCAGATGATTTGCGCCAATAAAAAGAACGCTCATCGGGAAAAT GGCTTCTTAATAAATTTCtcttactttaagggcagaaactttcgcgtttt tcgcgacTTCGATCCtttttcgcaaaagtttctggcaggtaagaaattaa acctgaaaaacgcgaaagttttttttcgcgaaaaataaactttcctgctc agttttgcactgtttgctatatttttgcgtgttttatgagtttttattac caaaaaaggtaaattctATATGAATTCGCAAAAATAtgtgaaatttcggc taaaaccataattcgcgaaacttaaattcgcaaaatttcgcgactttttg acttcgcgaaactttctgcccgcgaaaatttctgccCTTAAAATAGTAGG GGGCAATTCTTATGATCCTGAGCATCTTTCGGGGGACTAAACCGCATGTT ATTGGTTCGAAAGAAGATAAGATATGTATTTTCTTGAGAAATTTCTACCA ATCAAAATGATATACTACATGAGTCAAATATATTAACAAACATACtttta tataaatttttgattaaaaaagagaacaatgaaacacctgaaaagaccaa aattttcaaaattttcttgagaAATGCGGCTAGCAAAAGTTCTTAAGGCC AAAAAACTGACGTTGTAAACAAAATTCCTACCCCCTCCCCAAAATAGGCg aaaaattgacgatttttcAAACGTTGTAGTTTCCTAACCTAAAAACCCTA GtgatttttgttaatatttttgaatttatctCGTTCAGGCGATGTTCAAA TACGGGGACGACCTGAGGCAGGATCAGTTAGTTCTACAAATTATTACACT CATGGATAAAGTAAGCAAatatctttttctaaatacatAGACTAGCTTAT TTGCTATCAttgaagggctagaggcgagactcttggatgggaaatgaaac tacttatttcccatccagaacgcccgcgcgtagttttacacaaacgccgg attgaaactaaaatctatcactagatttaaaaaaaatgtagtcctccaaa acaaaggaaccactagatataATCTGTCGTCATGATTACCACGCGTTCTA ttcgcgttttggatgggaaataagtagcttcaatttctATTGCCTGAGNg acgcgttctatgcgcgttttggatgggaaataagtagcttcaatttctAT TGCCCgaaaagggttaaagtttcgcctctagcccttcgggcttgaaactc aatgttcgCTATGACGGGACAAGTTTAGTCCAGGATTTGGTCACCTAAGG TAATTACCGAAGTACGAGGCGGCCTCGCTACGATTCTTATTCTGCTCGAT TTTACAACTTTCTAATCAGGAGTCATGCGTGCTACCACTCAACTCATACT CCCTAACAAGAGTTTAAACCACTTTTCTCCCTTAGCTTCTACGCCGAGAA AACTTAGACTTAAAGCTGAAACCGTACAATGTGCTGGCAACCAGTATCAC AGAAGGTAATACTTTAGTTATTTTTAGCAAAGGCCGTGTGGTATTAGACG CTGATGAATGTCCAACCTAATAGATGCTGGATCAGTTGGTCGTGGACAAT CAAAAGCCTAAGTTAAAGTCCTCTATTTACTAGAAATTATCCACggaaaa tatcgactctatcaaGCTAACCTTTTTTTCTAATATTTATAATTACCTTT TCTGTTTGAATTAGACACCAAcctttttggttgattttttactttctaAA GGAAACCTCTACTTATGTGCCTTCTGTGTCAGCAATCCAAACTAAAAAGT TTTCTATAAGAACCAAGTCTCAATTTTGGACAAAACGCAGTCAATCCCAG ACTCCGATTTCAGGAATGGTTAAAGAAAAGCTGATTTTAAGCgcctttta aatctttaaattgACAAAGTAAGCATATTAAGGAGATTAAAgcttaaaaa taatgaaaaattaagcAGCAGtgcctcagcaaaattttactggttcttat aaaagaaagagtTTAACTAGGCTATGTATTTATTCCATGAAGTATTTGTC TTTTAAATTAATCTTTTCTAATCTTTCAGGAATGGTGCAAATCATAGAAT CAACAAATGTCGCTCATATTTTGAGCAGCTACGATGGATCCATACAGGTA CCATGTCTAaaatctctataactcgaaattgtCTGAGTTATGAGGAGTTC GAGATTCAAATTTGATCCTGCAGAAACCATGTCTCGTTTTCCCTCATTCC TAAAATAATGAGATATTCACCTATCTTGCAAGAAGtctaattttcgaaat ttcctaAAACACCAAGAACAAGTGCCTTATTGATTATGAAGGTTTATTTA GCGAGGCATCTGTTGATTTTCAAAGTCAGTAAAGAAATTGACAGAAAgtc tttatttaaaaattaaGCATAAGCTTTTCGACAGTTTTCATCTTCAGTGC AAATGATTTGCCTTATTGTATGTACTTTATTCGTTAGTGATTCACTTACT TTTTTTCCAACTATACTTTCTCTACAGAGCTACTTCCGCGAAACGAACCC ATTAGAAGGTGCTCCGTACGGTATAAACCCCGAAACCATGGAAACGTATG TCAAGAGTTGCGGTGAGAATCtttttgatcttattttttcgaTATCTTAT GATTTTAACTCGAATAACCTATCTGTAGTATCATTTATGACCTATGAAGT TGATCACTGATTAGCAGACAGAAAGGCAATGTCAATGCCTATCAATATGA AATATATGTTCAGCCCCTAAACTGCCAAATTATTAAGTTAGATTCCCCTG AATTTGTGTGCTCTTATGCAAAAGTTTTAGTATAGTGATGATGTTTACTT ACTTTATTTTTGTAGCTGGTTATTGTGTGATAACGTACATATTGGGTGTT GGAGATCGCCATCTGGATAATCTACTTCTCACCAAATCAGGTAGAGAACC TTAAATATACGGATGATTTTCCTTTCCTAAGTCTCCCATCCAACCCAAAG CAACATATCTATAATTTCGAAATATCGGAGTATCTGTTAGTGCGTCAAAC CTGTTATTCTATCCCGCTGACTTCGTCTCATGACCATTTATATATCGTAT CTGCCTTATTTGGGGAAAAAATAACAGTTGTGTAGACAGGGGTGAAGAAC GATCTGCGTAGGAGTGCAGATCTTTAGGACAATCAGCGACAATGGCACTT ACCTATTCATTATATGAAAACATATTTACTGTGTCGTTAAAACATGCTCT CCTAAACAACTGTTccttcacccctgtctacgctactgaatAAAGCTAGG TGTAGCAACTGGGGTAGTaactgaaaattttcaagatcAAAATTTTACGT GGTAAATCTTTAAAAGTATGTTATTTGAGCTGATGACATGAAAAACTCGA CCAATGCCTTCTTTTATAGTATATTATGTTTTCCAGGAGCGTTAATTCAG TATGTTTTAAAGTTTCACTTAAATGTATAAATAAGTCTTTTGGGCTTCAA TTATTCCCCTTGTTTTTCATTTCCAGGAAATTTATTTCATATTGACTTTG GATATATTCTTGGTCGCGACCCAAAACCTTTTCCACCACCCATGAAACTA AGCAAAGAAATGGTAAGCGCCTTcttaaaggtttcatttttacataagtg ttcccgtctCTTATCAGGCACATGTCTCATATTAGAACGatgtctaccta ttgttatatcatGCTGATATAAATTTTTTCCTCCTTCGGACCAATCTTTC TCCATATTCTTGTGAATTCAATATACAAaggcttgtaaattaaaattgac gagtaagaaaacgatatcactctattatttaaaaacaaaacttttacaGA CATATCAGACAAGCTTTGATATATTAACCTGgttatctttctttttcaaa cggTCTGCGTCAACCAGCTCAAATGGGCTTTCTGGAAAGTTTTGACATac tgataaaaaattaataactTTGAATAGGACAGTTTCAATGAAAGAATAGC TTaaattttcttctattttcatCAGGTTGAAGGCATGGGAGGAACAACAA GCGAATATTATCAACAATTCCGTAAACTTTGTTTCACTGCATTTCTTCAT TTGAGAAGGTATATTTATGTATTGTTACTCGGGAATTTCCAGTGTCTAAT GGTAATTTTGCCTCGACCCCCGTCAAATATATCTTCATCTTGTTACTTCT CCTTTTAAAAATTCTGCCGTATAACTATTTGAGTTAACAGTTGGGGAATT GATCCGACTGTAAAACTAAATTTTCATCTACGCTGGTATCATCAGatttt gaaattcagaaaagtaTGACTTCATAATGGTAGGCGACGAGGAGTGTTAT AAGAAATAACCTATAATGCTTTCGTCACTATCTGAAATATTGTTCAAcca atggaaaatattttttagatctCGTCGTTCTTTTGTATACTTAGAACAAG ATCCCAATGCAGGAGATTGATTACCACTCCTCTATTTCTCATTCTAGGTA CGCCAATCTATTCTTGAACTTGTTCAGTCTAATGGTTGATGCGTCAATCC CTGATATCGCTCTCGAACCTGACAAAGCAGTCAAAAAGGTACAAATGCTT tcgaaatttcttatttttgcgTGGAGAACTCAGTTGTATAGCGACTCTCT CCTGCCACCCTGGAACAGTTAGTCTGTACAATCCTGAGCTCTACAAGCTT TTTTCAAGTTGAATAAAGCATTCAAGCTGATTTCCTTCCGTCTTCTTGGT CAACTGACGGTATATGTGCGGCGtaaaaattgacttttgaaTTCACAGCC TTACAACGTAGCAAAAATCGTTACAGTACAGCTAATAAGTACAAATTGCT GACCCTTTTGCATCAGAGTCAGTTAAATTTCAACTCTCTATAGAAAATCC ACTTTTACAGTACATTTCTGATCTCTTGAAAAACACGCCCTGAGCTGCCg tacatacccgtcggtcaataaTTTGTCGGATGAGATTTAATTCATTTTCG CTTCCTAGGACTTAATTTAGCGGaatattttttaatctttgtctTAAACA ACTCAGCCCTATTCACTACTCATCCATAACACACATATtaaagttgtttt ttataatgTACAAACCGTCGCTTTCGTTCAATACTTCACAGGTTCAAGAC AAATTTCGTTTGGATTTGAGTGACGAAGAAGCAGTCCAATATCTCCAAGC CTTGATTGATGAAAGTGTGAATGCTGTCTTCGCCTCACTTACTGAACAGC TTCATAAGTTTGCACAGGTATGAATAGTAAGGAAGTCTGTGCCCGCaatc ggaggcgacccgaaggctcctctttcgatagctatctacccgaagttAAG GGAGAGCGGCACTtattctccctggattgctccacttacccttgactcCT GTTTTAATTACTGAGCATCAAGTagagagaggcatcaagtaccNCGAATA GTAAGGAAGTCTGTGCCCGTaatcggaggcgacccgaaggctcctctttc gatagctatctacccgaagttAAGGGAgagcgccactctttctccctgga ttgctccacttacccttgactcCTATTTTAattactgagcatcaagcaga gagaggcatcaagtaccattttgggagtCTTTGTTATGACCCGGTCGGGG GTCGAACCCACCACCTCGCGTACCGTAAccagatgctctaccactgcact acggtggAATACGGTACGAATAGTAAGATTGATACTTTAGCCGGATGGCT TTCTAACCTTCTTATAGTAAACCCTAGAATCCTGGAAGGTTAGCTCCCGA CAATGCTTATTAAGTAAAGGGTAGGCTAGGTTATGGTGAAGATTTTGGGT ACTTTGAGAAGCATAAATATTCAGGAATAAGATTAGGGGAAGGTCAAGGC TATCTTTAAAATGTAGTCACAGGTCACCcatatcatttttttctgagacA CCACAGTCagcgtttttctttttcaattttccttagTATTGGAGAAAGTG AAGGGCTGAACATCCGACGATTTTGATTTGGAGATATCTGTGTGGATGTA ACAAGTTAACGCCTGTAACAGTATTTCTCACGGCGTTGATGTCTACTGAC GATCATCTTTTTATTACGACTTGGTGAAATACGTGCCTAGCATTTGGCTC TCGTTTTATGGAGTATGTATTATACATTTTTTCATCGTAATCGAAGAaca atttctaaaaaaactgTTGGAATATCGTCGTtaacaaactgaaaatttga cttCTTACTTTCCTGAGACTGGAATTACAACAATAACTAAAATATTTTGG TTTATTCAAAAGAAATCCCATTATTGAGGTAGTTTTATTagcaatttaaa atttaaattaaaagtaATAACTTATGTCGTTTCTTTTCCGTTATTTCCAG AGACACCTTAATTATATCAAGCTTCTATTATATTATCAGCTCCTTAagta aatcaagtttttttcgtttgtttgttTGATCAGGAAAAGAGATTGCTACG GTTTGGTTTTGGtaaacttttcattttatagaaattagaaaatcaatttt gttatttttaatttctaatttattcttgaattaattttgcgaaaaatatt ttgtataaacaaaaaaattggaaaagt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008276TCONS_00008276Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008276-proteinTCONS_00008276-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:303511..310337 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.84 12.87 22.29 22.51 13.7 9.27 15.37 17.51 16.66 19.08 17.48 14.25 14.19 16.99 13.29 16.12 15.57 15.83 9.86 11.61 12.12 12.3 16.68 18.25 22.02 20.74 8.56 7.43 11.64 11.77