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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=transcript|length=2154bp
aacaattattttttttcaagagggaTGATAATTGGCGTcaaCTCAAAGGG
CTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCATTAGTGGGAGGAT
CACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTCCGGTTCTTCTAT
AGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAAAGTCCAACTTGA
TAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTTGGTTGTGGA
ATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCTTTCAAGTTAAAT
TCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGGAGAAATGCATGA
AAGATTAAGGCGAAACTACCAAAAGATTTATAGACATGCTTACGAAAAAT
ATGGCTTGGAATGGGCTTTTAATGActtgaaacaaaaatttgatgcaTCC
TTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCTAGATGACAT
TGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGGACTGGACAGAAT
TTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTTTATAACCCACCA
ACCGATCAAGATGATGCTATCATTAACAAAATGTTTGAAGAGATGTCGGA
CACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTGGACCCGGAAAAT
GTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATGTGTGTTGGT
GTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCCACTTTTGGTAAA
GCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAGCAAACACATTTT
TCGATGcaacaaattcaaaaagtttcgatgaaaaattgaaaaatgctaAA
ACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGTCGGTGGTGCACT
TGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCATCAATTCTTACA
ATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATCCTCCATCATTTT
GCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGGTGAATTCACTCT
TACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTGCGTTTACTGGTC
CGTATAATATGAAAGCTACATACAGTAATCGAAAATGTCCTGGTCAAGAT
GTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCTTGCAAGATGCGA
CATCGATCCTGATTCCGATTTATCATTCAATCAGTTAAACGGATATCGGA
CTGAATCTACTGACGTTCCCTTGACGGTTAAATCAtttgtttgcaaaaaa
taaCTCCCTCCGACTCGGCATAAACCATGGGCAATATTTTCCCTTATAAA
CACTGTTAGCAAACAATTTTGGGATTGCTTTTGTTagcatttttaatatt
tttttagagtGTTTTggaacgaaaaaaaaagactttgtaTTCTCTGGGTG
TTActaaaaccgacccttagagggactgaaatcgaagaaaaaattgattt
ttcttgaattttgtgacccttattgggacttttttgcttgaaaatgagGC
TTTTCAAGGTCAAGAAATCTAAATTAAATGAGTATCTTTTAACATCATAT
ACTATTTTACTGGTGTATCATTTATATCGCTACttcattaattttctttt
gacaTTCTTACAAAAAGAAGATACTTTATCAGATAAGTTTGGTTTTTCGG
GTTTTTCAAACAAAGTACAACAAAGGTCGATTGTATAGCAttacatttca
tttttcattatgtccttttaaacacccctgtctctgtacCCCAGTGGGTG
TCGAAAACCCAGTGATGTGGGACAAATTTGAAAACTACTGGGTTGcaaga
tattttgtaaaaattgagtGGGATGACCAATTTCTCCTTGATTTTTTAAC
TGGGTTGAGAAaagtttttaagcatttttttgtATGAAGTAGAGTAGGTT
GTTATCTTTTGTGCTATTCATTGTGTAATgtcttaatttttgaaattttt
ggaagtTAAATAATTCTAGAGTCTAGATCGTCTAGTTATGTTTAATTTGC
TGAGAATATACTTAGTACTGGTAAAAAGCTCCAATGTGTTACAATTTTGT
CAAT Run BLAST on NCBI protein sequence of TCONS_00008033-protein >TCONS_00008033-protein ID=TCONS_00008033-protein|Name=TCONS_00008033-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
NNYFFSRGMIIGVNSKGLVSRYTDVQEVPLVGGSPAENFARFRKRFRFFY
SDFAQETNFTVYKVQLDKEKVVLADPVAMSWLWNNQRLISKAEPGPFKLN
SLRFVPTSLASNGEMHERLRRNYQKIYRHAYEKYGLEWAFNDLKQKFDAS
FPVKGVKVPVERILDDIAISSFAHFMLGKDWTEFKVYDQYAKVLSLYNPP
TDQDDAIINKMFEEMSDTPLIKDELNSVFGPGKCKKEATSEALFSVMCVG
VPGLRKAMNSIVPLLVKLKPKDRNHIIEEANTFFDATNSKSFDEKLKNAK
TIEKFVLEMLRYVGGALGYVTYEANQDFIINSYNGYYSIYKGQTLILHHF
AAQRNPDTFRFPGEFTLTGNKEYLKENFFAFTGPYNMKATYSNRKCPGQD
VAMNLVKMYVIHLARCDIDPDSDLSFNQLNGYRTESTDVPLTVKSFVCKK Run BLAST on NCBI transcript from alignment at sc0000081:233264..236210- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=transcript|length=2947bp|location=Sequence derived from alignment at sc0000081:233264..236210- (Clytia hemisphaerica)
AACAATTATTTTTTTTCAAGAGGGATGATAATTGGCGTCAAGTATGAAAT
TTTGAACATTTTTTGAGCGCTCTGCCGGGTTTTTATGATTTTGTAACTTT
CCCTCTCTGCGACTGCGCGATGATAATTATGGCAAATTCAGTTCCGTAAT
ATTAGTTTATGCATAGTTATGTTGAATAACTGAACAAAAAAATAAAAGTC
AACACATATGTCGATATTTCGTTCTCTTTCAGAACATTTTTAAATGCTTA
AAAATCAATGATGCGAAATTGTCAAGTGAGAAATAAAAAATCTAATGAAC
AAAGGAAAGAATTCTATATAGGAATAAAACAAAGAAAATGTTAAAAAGAT
TTAATAAAAATAATGGTGCGTAGCGATAATATTTACAACATTAAAAAACA
GTACAATAAGATTGATAAAAGCCTTGGGGAATAATCGTCAAAAGAAAAAC
TTATTAATTAATTAATATTAAAAACATCAGCGCATACAACAAAGGATTTG
AATCAATGTCAGTCTTTCTCTTTCTCATATGTACTATGCTCAAATTTAGA
GAACAAAGAAGTAAGCGCGTAACAATAACGGACAAAAACACATGGTTAAT
CACTGAGATTAATGGAAAATCACTAGGGAAATAGAAAGGAGTGCAATCTT
CGTAAAAAGATAATAAAAATCAATTAAAAGTCACTCCATCGTATTTCTTC
GACGTGGTCTAAAAGGGACTCATGATAATTTTCAGTGTTCATAGCTTTTG
ATCAACTGAAGAGGGCTGATCAGAAGTAAAAATGAGTGTTATAACTTTGA
TGCAGATTATTTCAATACTTTTTGTCTTTCATAGCTCAAAGGGCTTAGTA
TCGAGATATACCGATGTTCAAGAAGTGCCATTAGTGGGAGGATCACCGGC
AGAAAATTTTGCACGATTCCGAAAACGATTCCGGTTCTTCTATAGTGATT
TTGCCCAAGAAACCAATTTTACCGTTTATAAAGTCCAACTTGATAAAGAG
AAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTTGGTTGTGGAATAATCA
GAGATTGATTTCCAAAGCAGAACCAGGCCCTTTCAAGTTAAATTCACTTC
GCTTTGTTCCCACTTCATTAGCTTCGAACGGAGAAATGCATGAAAGATTA
AGGCGAAACTACCAAAAGATTTATAGACATGCTTACGAAAAATATGGCTT
GGAATGGGCTTTTAATGACTTGAAACAAAAATTTGATGCATCCTTTCCCG
TCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCTAGATGACATTGCTATT
AGTTCATTTGCTCACTTTATGCTTGGCAAGGACTGGACAGAATTTAAAGT
ATATGACCAATATGCCAAGGTTTTATCGCTTTATAACCCACCAACCGATC
AAGATGATGCTATCATTAACAAAATGTTTGAAGAGATGTCGGACACACCT
CTTATAAAAGACGAGTTAAATTCTGTCTTTGGACCCGGAAAATGTAAAAA
GGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATGTGTGTTGGTGTTCCAG
GCTTACGTAAAGCTATGAATTCGATTGTTCCACTTTTGGTAAAGCTCAAG
CCCAAGGACCGAAATCACATCATTGAAGAAGCAAACACATTTTTCGATGC
AACAAATTCAAAAAGTTTCGATGAAAAATTGAAAAATGCTAAAACCATCG
AGAAGTTTGTTTTGGAAATGCTCAGATATGTCGGTGGTGCACTTGGTTAT
GTTACGTACGAAGCAAACCAAGATTTCATCATCAATTCTTACAATGGCTA
CTACAGCATCTACAAAGGTCAAACCCTAATCCTCCATCATTTTGCAGCTC
AACGAAATCCGGATACATTCCGATTCCCAGGTGAATTCACTCTTACTGGT
AATAAAGAATACCTCAAAGAAAACTTCTTTGCGTTTACTGGTCCGTATAA
TATGAAAGCTACATACAGTAATCGAAAATGTCCTGGTCAAGATGTCGCCA
TGAATCTGGTTAAAATGTATGTCATCCACCTTGCAAGATGCGACATCGAT
CCTGATTCCGATTTATCATTCAATCAGTTAAACGGATATCGGACTGAATC
TACTGACGTTCCCTTGACGGTTAAATCATTTGTTTGCAAAAAATAACTCC
CTCCGACTCGGCATAAACCATGGGCAATATTTTCCCTTATAAACACTGTT
AGCAAACAATTTTGGGATTGCTTTTGTTAGCATTTTTAATATTTTTTTAG
AGTGTTTTGGAACGAAAAAAAAAGACTTTGTATTCTCTGGGTGTTACTAA
AACCGACCCTTAGAGGGACTGAAATCGAAGAAAAAATTGATTTTTCTTGA
ATTTTGTGACCCTTATTGGGACTTTTTTGCTTGAAAATGAGGCTTTTCAA
GGTCAAGAAATCTAAATTAAATGAGTATCTTTTAACATCATATACTATTT
TACTGGTGTATCATTTATATCGCTACTTCATTAATTTTCTTTTGACATTC
TTACAAAAAGAAGATACTTTATCAGATAAGTTTGGTTTTTCGGGTTTTTC
AAACAAAGTACAACAAAGGTCGATTGTATAGCATTACATTTCATTTTTCA
TTATGTCCTTTTAAACACCCCTGTCTCTGTACCCCAGTGGGTGTCGAAAA
CCCAGTGATGTGGGACAAATTTGAAAACTACTGGGTTGCAAGATATTTTG
TAAAAATTGAGTGGGATGACCAATTTCTCCTTGATTTTTTAACTGGGTTG
AGAAAAGTTTTTAAGCATTTTTTTGTATGAAGTAGAGTAGGTTGTTATCT
TTTGTGCTATTCATTGTGTAATGTCTTAATTTTTGAAATTTTTGGAAGTT
AAATAATTCTAGAGTCTAGATCGTCTAGTTATGTTTAATTTGCTGAGAAT
ATACTTAGTACTGGTAAAAAGCTCCAATGTGTTACAATTTTGTCAAT Coding sequence (CDS) from alignment at sc0000081:233264..236210- >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000081:233264..236210- (Clytia hemisphaerica)
CTCAAAGGGCTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCATTAG
TGGGAGGATCACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTCCGG
TTCTTCTATAGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAAAGT
CCAACTTGATAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTT
GGTTGTGGAATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCTTTC
AAGTTAAATTCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGGAGA
AATGCATGAAAGATTAAGGCGAAACTACCAAAAGATTTATAGACATGCTT
ACGAAAAATATGGCTTGGAATGGGCTTTTAATGACTTGAAACAAAAATTT
GATGCATCCTTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCT
AGATGACATTGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGGACT
GGACAGAATTTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTTTAT
AACCCACCAACCGATCAAGATGATGCTATCATTAACAAAATGTTTGAAGA
GATGTCGGACACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTGGAC
CCGGAAAATGTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATG
TGTGTTGGTGTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCCACT
TTTGGTAAAGCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAGCAA
ACACATTTTTCGATGCAACAAATTCAAAAAGTTTCGATGAAAAATTGAAA
AATGCTAAAACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGTCGG
TGGTGCACTTGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCATCA
ATTCTTACAATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATCCTC
CATCATTTTGCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGGTGA
ATTCACTCTTACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTGCGT
TTACTGGTCCGTATAATATGAAAGCTACATACAGTAATCGAAAATGTCCT
GGTCAAGATGTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCTTGC
AAGATGCGACATCGATCCTGATTCCGATTTATCATTCAATCAGTTAAACG
GATATCGGACTGAATCTACTGACGTTCCCTTGACGGTTAAATCATTTGTT
TGCAAAAAATAAAACAATTATTTTTTTTCAAGAGGGATGATAATTGGCGT
CAACTCAAAGGGCTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCAT
TAGTGGGAGGATCACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTC
CGGTTCTTCTATAGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAA
AGTCCAACTTGATAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGT
CTTGGTTGTGGAATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCT
TTCAAGTTAAATTCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGG
AGAAATGCATGAAAGATTAAGGCGAAACTACCAAAAGATTTATAGACATG
CTTACGAAAAATATGGCTTGGAATGGGCTTTTAATGACTTGAAACAAAAA
TTTGATGCATCCTTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAAT
TCTAGATGACATTGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGG
ACTGGACAGAATTTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTT
TATAACCCACCAACCGATCAAGATGATGCTATCATTAACAAAATGTTTGA
AGAGATGTCGGACACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTG
GACCCGGAAAATGTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTG
ATGTGTGTTGGTGTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCC
ACTTTTGGTAAAGCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAG
CAAACACATTTTTCGATGCAACAAATTCAAAAAGTTTCGATGAAAAATTG
AAAAATGCTAAAACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGT
CGGTGGTGCACTTGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCA
TCAATTCTTACAATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATC
CTCCATCATTTTGCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGG
TGAATTCACTCTTACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTG
CGTTTACTGGTCCGTATAATATGAAAGCTACATACAGTAATCGAAAATGT
CCTGGTCAAGATGTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCT
TGCAAGATGCGACATCGATCCTGATTCCGATTTATCATTCAATCAGTTAA
ACGGATATCGGACTGAATCTACTGACGTTCCCTTGACGGTTAAATCATTT
GTTTGCAAAAAATAAAACAATTATTTTTTTTCAAGAGGGATGATAATTGG
CGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008033-exon-sc0000081-1575043694:236170..236210 | TCONS_00008033-exon-sc0000081-1575043694:236170..236210 | Clytia hemisphaerica | exon |
| TCONS_00008033-exon-sc0000081-1575043694:233264..235376 | TCONS_00008033-exon-sc0000081-1575043694:233264..235376 | Clytia hemisphaerica | exon |
| TCONS_00008033-exon-sc0000081-1510915933:236170..236210 | TCONS_00008033-exon-sc0000081-1510915933:236170..236210 | Clytia hemisphaerica | exon |
| TCONS_00008033-exon-sc0000081-1510915933:233264..235376 | TCONS_00008033-exon-sc0000081-1510915933:233264..235376 | Clytia hemisphaerica | exon |
| TCONS_00008033-exon-sc0000081-1491911889:236170..236210 | TCONS_00008033-exon-sc0000081-1491911889:236170..236210 | Clytia hemisphaerica | exon |
| TCONS_00008033-exon-sc0000081-1491911889:233264..235376 | TCONS_00008033-exon-sc0000081-1491911889:233264..235376 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:233264..236210 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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