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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=transcript|length=2154bp aacaattattttttttcaagagggaTGATAATTGGCGTcaaCTCAAAGGG CTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCATTAGTGGGAGGAT CACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTCCGGTTCTTCTAT AGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAAAGTCCAACTTGA TAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTTGGTTGTGGA ATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCTTTCAAGTTAAAT TCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGGAGAAATGCATGA AAGATTAAGGCGAAACTACCAAAAGATTTATAGACATGCTTACGAAAAAT ATGGCTTGGAATGGGCTTTTAATGActtgaaacaaaaatttgatgcaTCC TTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCTAGATGACAT TGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGGACTGGACAGAAT TTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTTTATAACCCACCA ACCGATCAAGATGATGCTATCATTAACAAAATGTTTGAAGAGATGTCGGA CACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTGGACCCGGAAAAT GTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATGTGTGTTGGT GTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCCACTTTTGGTAAA GCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAGCAAACACATTTT TCGATGcaacaaattcaaaaagtttcgatgaaaaattgaaaaatgctaAA ACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGTCGGTGGTGCACT TGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCATCAATTCTTACA ATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATCCTCCATCATTTT GCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGGTGAATTCACTCT TACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTGCGTTTACTGGTC CGTATAATATGAAAGCTACATACAGTAATCGAAAATGTCCTGGTCAAGAT GTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCTTGCAAGATGCGA CATCGATCCTGATTCCGATTTATCATTCAATCAGTTAAACGGATATCGGA CTGAATCTACTGACGTTCCCTTGACGGTTAAATCAtttgtttgcaaaaaa taaCTCCCTCCGACTCGGCATAAACCATGGGCAATATTTTCCCTTATAAA CACTGTTAGCAAACAATTTTGGGATTGCTTTTGTTagcatttttaatatt tttttagagtGTTTTggaacgaaaaaaaaagactttgtaTTCTCTGGGTG TTActaaaaccgacccttagagggactgaaatcgaagaaaaaattgattt ttcttgaattttgtgacccttattgggacttttttgcttgaaaatgagGC TTTTCAAGGTCAAGAAATCTAAATTAAATGAGTATCTTTTAACATCATAT ACTATTTTACTGGTGTATCATTTATATCGCTACttcattaattttctttt gacaTTCTTACAAAAAGAAGATACTTTATCAGATAAGTTTGGTTTTTCGG GTTTTTCAAACAAAGTACAACAAAGGTCGATTGTATAGCAttacatttca tttttcattatgtccttttaaacacccctgtctctgtacCCCAGTGGGTG TCGAAAACCCAGTGATGTGGGACAAATTTGAAAACTACTGGGTTGcaaga tattttgtaaaaattgagtGGGATGACCAATTTCTCCTTGATTTTTTAAC TGGGTTGAGAAaagtttttaagcatttttttgtATGAAGTAGAGTAGGTT GTTATCTTTTGTGCTATTCATTGTGTAATgtcttaatttttgaaattttt ggaagtTAAATAATTCTAGAGTCTAGATCGTCTAGTTATGTTTAATTTGC TGAGAATATACTTAGTACTGGTAAAAAGCTCCAATGTGTTACAATTTTGT CAAT Run BLAST on NCBI protein sequence of TCONS_00008033-protein >TCONS_00008033-protein ID=TCONS_00008033-protein|Name=TCONS_00008033-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
NNYFFSRGMIIGVNSKGLVSRYTDVQEVPLVGGSPAENFARFRKRFRFFY SDFAQETNFTVYKVQLDKEKVVLADPVAMSWLWNNQRLISKAEPGPFKLN SLRFVPTSLASNGEMHERLRRNYQKIYRHAYEKYGLEWAFNDLKQKFDAS FPVKGVKVPVERILDDIAISSFAHFMLGKDWTEFKVYDQYAKVLSLYNPP TDQDDAIINKMFEEMSDTPLIKDELNSVFGPGKCKKEATSEALFSVMCVG VPGLRKAMNSIVPLLVKLKPKDRNHIIEEANTFFDATNSKSFDEKLKNAK TIEKFVLEMLRYVGGALGYVTYEANQDFIINSYNGYYSIYKGQTLILHHF AAQRNPDTFRFPGEFTLTGNKEYLKENFFAFTGPYNMKATYSNRKCPGQD VAMNLVKMYVIHLARCDIDPDSDLSFNQLNGYRTESTDVPLTVKSFVCKK Run BLAST on NCBI transcript from alignment at sc0000081:233264..236210- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=transcript|length=2947bp|location=Sequence derived from alignment at sc0000081:233264..236210- (Clytia hemisphaerica) AACAATTATTTTTTTTCAAGAGGGATGATAATTGGCGTCAAGTATGAAAT
TTTGAACATTTTTTGAGCGCTCTGCCGGGTTTTTATGATTTTGTAACTTT
CCCTCTCTGCGACTGCGCGATGATAATTATGGCAAATTCAGTTCCGTAAT
ATTAGTTTATGCATAGTTATGTTGAATAACTGAACAAAAAAATAAAAGTC
AACACATATGTCGATATTTCGTTCTCTTTCAGAACATTTTTAAATGCTTA
AAAATCAATGATGCGAAATTGTCAAGTGAGAAATAAAAAATCTAATGAAC
AAAGGAAAGAATTCTATATAGGAATAAAACAAAGAAAATGTTAAAAAGAT
TTAATAAAAATAATGGTGCGTAGCGATAATATTTACAACATTAAAAAACA
GTACAATAAGATTGATAAAAGCCTTGGGGAATAATCGTCAAAAGAAAAAC
TTATTAATTAATTAATATTAAAAACATCAGCGCATACAACAAAGGATTTG
AATCAATGTCAGTCTTTCTCTTTCTCATATGTACTATGCTCAAATTTAGA
GAACAAAGAAGTAAGCGCGTAACAATAACGGACAAAAACACATGGTTAAT
CACTGAGATTAATGGAAAATCACTAGGGAAATAGAAAGGAGTGCAATCTT
CGTAAAAAGATAATAAAAATCAATTAAAAGTCACTCCATCGTATTTCTTC
GACGTGGTCTAAAAGGGACTCATGATAATTTTCAGTGTTCATAGCTTTTG
ATCAACTGAAGAGGGCTGATCAGAAGTAAAAATGAGTGTTATAACTTTGA
TGCAGATTATTTCAATACTTTTTGTCTTTCATAGCTCAAAGGGCTTAGTA
TCGAGATATACCGATGTTCAAGAAGTGCCATTAGTGGGAGGATCACCGGC
AGAAAATTTTGCACGATTCCGAAAACGATTCCGGTTCTTCTATAGTGATT
TTGCCCAAGAAACCAATTTTACCGTTTATAAAGTCCAACTTGATAAAGAG
AAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTTGGTTGTGGAATAATCA
GAGATTGATTTCCAAAGCAGAACCAGGCCCTTTCAAGTTAAATTCACTTC
GCTTTGTTCCCACTTCATTAGCTTCGAACGGAGAAATGCATGAAAGATTA
AGGCGAAACTACCAAAAGATTTATAGACATGCTTACGAAAAATATGGCTT
GGAATGGGCTTTTAATGACTTGAAACAAAAATTTGATGCATCCTTTCCCG
TCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCTAGATGACATTGCTATT
AGTTCATTTGCTCACTTTATGCTTGGCAAGGACTGGACAGAATTTAAAGT
ATATGACCAATATGCCAAGGTTTTATCGCTTTATAACCCACCAACCGATC
AAGATGATGCTATCATTAACAAAATGTTTGAAGAGATGTCGGACACACCT
CTTATAAAAGACGAGTTAAATTCTGTCTTTGGACCCGGAAAATGTAAAAA
GGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATGTGTGTTGGTGTTCCAG
GCTTACGTAAAGCTATGAATTCGATTGTTCCACTTTTGGTAAAGCTCAAG
CCCAAGGACCGAAATCACATCATTGAAGAAGCAAACACATTTTTCGATGC
AACAAATTCAAAAAGTTTCGATGAAAAATTGAAAAATGCTAAAACCATCG
AGAAGTTTGTTTTGGAAATGCTCAGATATGTCGGTGGTGCACTTGGTTAT
GTTACGTACGAAGCAAACCAAGATTTCATCATCAATTCTTACAATGGCTA
CTACAGCATCTACAAAGGTCAAACCCTAATCCTCCATCATTTTGCAGCTC
AACGAAATCCGGATACATTCCGATTCCCAGGTGAATTCACTCTTACTGGT
AATAAAGAATACCTCAAAGAAAACTTCTTTGCGTTTACTGGTCCGTATAA
TATGAAAGCTACATACAGTAATCGAAAATGTCCTGGTCAAGATGTCGCCA
TGAATCTGGTTAAAATGTATGTCATCCACCTTGCAAGATGCGACATCGAT
CCTGATTCCGATTTATCATTCAATCAGTTAAACGGATATCGGACTGAATC
TACTGACGTTCCCTTGACGGTTAAATCATTTGTTTGCAAAAAATAACTCC
CTCCGACTCGGCATAAACCATGGGCAATATTTTCCCTTATAAACACTGTT
AGCAAACAATTTTGGGATTGCTTTTGTTAGCATTTTTAATATTTTTTTAG
AGTGTTTTGGAACGAAAAAAAAAGACTTTGTATTCTCTGGGTGTTACTAA
AACCGACCCTTAGAGGGACTGAAATCGAAGAAAAAATTGATTTTTCTTGA
ATTTTGTGACCCTTATTGGGACTTTTTTGCTTGAAAATGAGGCTTTTCAA
GGTCAAGAAATCTAAATTAAATGAGTATCTTTTAACATCATATACTATTT
TACTGGTGTATCATTTATATCGCTACTTCATTAATTTTCTTTTGACATTC
TTACAAAAAGAAGATACTTTATCAGATAAGTTTGGTTTTTCGGGTTTTTC
AAACAAAGTACAACAAAGGTCGATTGTATAGCATTACATTTCATTTTTCA
TTATGTCCTTTTAAACACCCCTGTCTCTGTACCCCAGTGGGTGTCGAAAA
CCCAGTGATGTGGGACAAATTTGAAAACTACTGGGTTGCAAGATATTTTG
TAAAAATTGAGTGGGATGACCAATTTCTCCTTGATTTTTTAACTGGGTTG
AGAAAAGTTTTTAAGCATTTTTTTGTATGAAGTAGAGTAGGTTGTTATCT
TTTGTGCTATTCATTGTGTAATGTCTTAATTTTTGAAATTTTTGGAAGTT
AAATAATTCTAGAGTCTAGATCGTCTAGTTATGTTTAATTTGCTGAGAAT
ATACTTAGTACTGGTAAAAAGCTCCAATGTGTTACAATTTTGTCAAT Coding sequence (CDS) from alignment at sc0000081:233264..236210- >TCONS_00008033 ID=TCONS_00008033|Name=TCONS_00008033|organism=Clytia hemisphaerica|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000081:233264..236210- (Clytia hemisphaerica) CTCAAAGGGCTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCATTAG TGGGAGGATCACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTCCGG TTCTTCTATAGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAAAGT CCAACTTGATAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGTCTT GGTTGTGGAATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCTTTC AAGTTAAATTCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGGAGA AATGCATGAAAGATTAAGGCGAAACTACCAAAAGATTTATAGACATGCTT ACGAAAAATATGGCTTGGAATGGGCTTTTAATGACTTGAAACAAAAATTT GATGCATCCTTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAATTCT AGATGACATTGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGGACT GGACAGAATTTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTTTAT AACCCACCAACCGATCAAGATGATGCTATCATTAACAAAATGTTTGAAGA GATGTCGGACACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTGGAC CCGGAAAATGTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTGATG TGTGTTGGTGTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCCACT TTTGGTAAAGCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAGCAA ACACATTTTTCGATGCAACAAATTCAAAAAGTTTCGATGAAAAATTGAAA AATGCTAAAACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGTCGG TGGTGCACTTGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCATCA ATTCTTACAATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATCCTC CATCATTTTGCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGGTGA ATTCACTCTTACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTGCGT TTACTGGTCCGTATAATATGAAAGCTACATACAGTAATCGAAAATGTCCT GGTCAAGATGTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCTTGC AAGATGCGACATCGATCCTGATTCCGATTTATCATTCAATCAGTTAAACG GATATCGGACTGAATCTACTGACGTTCCCTTGACGGTTAAATCATTTGTT TGCAAAAAATAAAACAATTATTTTTTTTCAAGAGGGATGATAATTGGCGT CAACTCAAAGGGCTTAGTATCGAGATATACCGATGTTCAAGAAGTGCCAT TAGTGGGAGGATCACCGGCAGAAAATTTTGCACGATTCCGAAAACGATTC CGGTTCTTCTATAGTGATTTTGCCCAAGAAACCAATTTTACCGTTTATAA AGTCCAACTTGATAAAGAGAAAGTCGTTCTAGCTGATCCTGTTGCTATGT CTTGGTTGTGGAATAATCAGAGATTGATTTCCAAAGCAGAACCAGGCCCT TTCAAGTTAAATTCACTTCGCTTTGTTCCCACTTCATTAGCTTCGAACGG AGAAATGCATGAAAGATTAAGGCGAAACTACCAAAAGATTTATAGACATG CTTACGAAAAATATGGCTTGGAATGGGCTTTTAATGACTTGAAACAAAAA TTTGATGCATCCTTTCCCGTCAAAGGTGTAAAAGTTCCAGTTGAACGAAT TCTAGATGACATTGCTATTAGTTCATTTGCTCACTTTATGCTTGGCAAGG ACTGGACAGAATTTAAAGTATATGACCAATATGCCAAGGTTTTATCGCTT TATAACCCACCAACCGATCAAGATGATGCTATCATTAACAAAATGTTTGA AGAGATGTCGGACACACCTCTTATAAAAGACGAGTTAAATTCTGTCTTTG GACCCGGAAAATGTAAAAAGGAGGCGACTTCAGAAGCCTTGTTTTCGGTG ATGTGTGTTGGTGTTCCAGGCTTACGTAAAGCTATGAATTCGATTGTTCC ACTTTTGGTAAAGCTCAAGCCCAAGGACCGAAATCACATCATTGAAGAAG CAAACACATTTTTCGATGCAACAAATTCAAAAAGTTTCGATGAAAAATTG AAAAATGCTAAAACCATCGAGAAGTTTGTTTTGGAAATGCTCAGATATGT CGGTGGTGCACTTGGTTATGTTACGTACGAAGCAAACCAAGATTTCATCA TCAATTCTTACAATGGCTACTACAGCATCTACAAAGGTCAAACCCTAATC CTCCATCATTTTGCAGCTCAACGAAATCCGGATACATTCCGATTCCCAGG TGAATTCACTCTTACTGGTAATAAAGAATACCTCAAAGAAAACTTCTTTG CGTTTACTGGTCCGTATAATATGAAAGCTACATACAGTAATCGAAAATGT CCTGGTCAAGATGTCGCCATGAATCTGGTTAAAATGTATGTCATCCACCT TGCAAGATGCGACATCGATCCTGATTCCGATTTATCATTCAATCAGTTAA ACGGATATCGGACTGAATCTACTGACGTTCCCTTGACGGTTAAATCATTT GTTTGCAAAAAATAAAACAATTATTTTTTTTCAAGAGGGATGATAATTGG CGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00008033-exon-sc0000081-1575043694:236170..236210 | TCONS_00008033-exon-sc0000081-1575043694:236170..236210 | Clytia hemisphaerica | exon |
TCONS_00008033-exon-sc0000081-1575043694:233264..235376 | TCONS_00008033-exon-sc0000081-1575043694:233264..235376 | Clytia hemisphaerica | exon |
TCONS_00008033-exon-sc0000081-1510915933:236170..236210 | TCONS_00008033-exon-sc0000081-1510915933:236170..236210 | Clytia hemisphaerica | exon |
TCONS_00008033-exon-sc0000081-1510915933:233264..235376 | TCONS_00008033-exon-sc0000081-1510915933:233264..235376 | Clytia hemisphaerica | exon |
TCONS_00008033-exon-sc0000081-1491911889:236170..236210 | TCONS_00008033-exon-sc0000081-1491911889:236170..236210 | Clytia hemisphaerica | exon |
TCONS_00008033-exon-sc0000081-1491911889:233264..235376 | TCONS_00008033-exon-sc0000081-1491911889:233264..235376 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000081 | supercontig | sc0000081:233264..236210 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
Term | Definition |
GO:0005506 | iron ion binding |
GO:0020037 | heme binding |
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0055114 |
oxidation-reduction process |
molecular_function |
GO:0020037 |
heme binding |
molecular_function |
GO:0005506 |
iron ion binding |
molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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