TCONS_00007893 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007893
Unique NameTCONS_00007893
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2772

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007893 ID=TCONS_00007893|Name=TCONS_00007893|organism=Clytia hemisphaerica|type=transcript|length=2772bp
ATTGATCTATGTGGTGAAAATTGTCAAGAGATTAAATCCATGCCATGGAT
ATCATGATTGTCGCACAGAAAGGggatttaacatttaacatatATATTTT
TATGCTCAATAAGAGTATGTTTCTCTTGTTTCCCTCAGTTTCATTTTCGA
acgcaaaaatatcaaaaagaaaaaaatcaaaatggcggaaaAAGCGATGA
TTTATTTTGCTTTTAGTGTTTTGCTTTCCTTTCCAGCACCAAGCTCCCAG
atGGCTAAAAGTCTCTTCATGCCACTATCAAGTCTACAAGATTTGGGATT
CATTATCAAACCTCACAAAGATAATGTCTACAACGACATCCATAAAAGGA
TGGACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGCCAAA
CAGTTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGTGTCC
CAATCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGT
CCATCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTG
GGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGCATCC
AGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAAAC
CAGGACCCAAGGGACCACCAGGAGATGCTGGNCAAGTCTACAAGATTTGG
GATTCATTATCAAACCTCACAAAGATAATGTCTACAACGACATCCATAAA
AGGATGGACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGC
CAAACAGTTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGT
GTCCCAATCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCT
AAGTCCATCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACC
AGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGC
ATCCAGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACGCATTGGA
AAACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACCAGGCTCACA
AGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTATTGCATCCA
AGATGCCAAAAGATAAACAATGTTCACCAGACATCGTGAGCAACCTTCGT
GCAAGATTGGAGAAAGTGGAGAAATGTGCAACCaATACAACCTTGTTAGC
AGCCATAACATTGAACGTATTGAGTACACTTGCAAATCAAAGACACGAAA
AACCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCTCCACCACCG
CCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACC
AGCACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGGGACAGCCAG
CACCTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATGTGACGGAAAT
CAAGGCAATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGG
CGCTGACAAACAACAACCAGCTTGTAAACGATCTGGCACATGCGCAACCG
ATCCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAAC
CAAGCTAAagcacaacaacaacaaaatcctGTGGCCAAAGATTCTGCAAC
TGTCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAATTG
AAAGCAATGCAACTGTCATTCATTGGGCATCTTTCATTTGTGCTGTCTGT
CTATCTAAGTAGTAAATACATTACAATAAATTTGTTAAATAAAAATAGCG
TCTAATCgatataaaatttttattataattttgatatttctcaaTTCTTA
TGactaatcagatggtttgagatgtttttgtttgttgaaCCTTTCTGTGA
GCCCTGAGTAAAACCAAGAAATGCAAGTAGCAAGAATTCCAGTGTAAAAA
GCGTGTAAGTACCCAACTTAAAAAATTGTGATTGAAAAAAGTGAGGTAAA
TTGTTTTCGGATGTTTTGCTCAGCGTCATGAAAGGATTCtgcagaagaaa
aaaatctcaaacaatCTTTTTTATGAGTTATTTGACCTATACACATCACA
TGTAcataaatttcattttatttaaaaatactaaatagaaaatagaaaat
aatgatttaaaaaatgcaaatcaaaaaagttttcgtAGCTTCGTTTATGT
CCAAAAAGTAAACCAATGTGGTAAAACATACAGCGGATACCTACCCTGTC
CCAACAATATTTCAGCAGCTCAATTGTTCGTTTGTCCGTTCAACAAGCAA
GGAGCTGTCATAATTCATAATAACACCTTACTCTTTTGTCATGTAATCAC
AAAAATGAAGCAAGAAAGCAAACAACAACATACAGGTATGCCTGATAGTC
CATACTTGAAACAGCTATCTAAGTGAGATACATTCTTCATTCCTCAtctt
tttcatgctctttctcACAATGTTCCTTAGATGAGATGAAGGCTAAAGGC
GCCATACCAATGATACAACCTATCACGATGCCAATCGCACGACCCTGAGT
TGTGAAAAAATCCAACAAacaattaaaggttttatttttacataagtgtt
cccgtttcatatcaggcacatattttatatcaggacagtgtgttgccatt
gttatattatgctgatataagcaaaaaatgttgttttttcctctttctga
tcaatcttgctccacatccgtg
Run BLAST on NCBI

protein sequence of TCONS_00007893-protein

>TCONS_00007893-protein ID=TCONS_00007893-protein|Name=TCONS_00007893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MDINSNSNIEVPIEIAKQLGLLKPPGAGGCPPCPNPPCTGGPAGCDVKAK
SISEVQINGKGDYSAPVGPVFSVGDAPPPGIVHPELLTLNLKGKDGRIGK
PGPKGPPGDAGPPGSQGPMGPKGEQGDECIASKMPKDKQCSPDIVSNLRA
RLEKVEKCATNTTLLAAITLNVLSTLANQRHEKPKSILVKQKRPPPPPPP
AAPAPPPPPAQPAAPPAPASPPSPPSPPSGQPAPAAPPCPAGPGKCDGNQ
GNANVQSDVKIDLTGGADKQQPACKRSGTCATDPSKTANALQTLQQLLNQ
AKAQQQQNPVAKDSATVLVNGVPVKIPLGK
Run BLAST on NCBI

transcript from alignment at sc0000080:239496..244710-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007893 ID=TCONS_00007893|Name=TCONS_00007893|organism=Clytia hemisphaerica|type=transcript|length=5215bp|location=Sequence derived from alignment at sc0000080:239496..244710- (Clytia hemisphaerica)
ATTGATCTATGTGGTGAAAATTGTCAAGAGATTAAATCCATGCCATGGAT
ATCATGATTGTCGCACAGAAAGGGGATTTAACATTTAACATATATATTTT
TATGCTCAATAAGAGTATGTTTCTCTTGTTTCCCTCAGTTTCATTTTCGA
ACGCAAAAATATCAAAAAGAAAAAAATCAAAATGGCGGAAAAAGCGATGA
TTTATTTTGCTTTTAGTGTTTTGCTTTCCTTTCCAGCACCAAGCTCCCAG
GTAAATATATTAATCAAATTAGTTAGAACCTCTAGAGTGTGTACCACGTC
TTTAGACTTTTGTCCATAGCTCATTGTTATAGATGGCACAACACATTATC
AATTGAAAACCTTTTGAAACAAACCACACAAGCCCAAACCAACTAATCTT
CCAAAACCATCCCATCAAATCAACTTTTTGATTTTTCAGATGGCTAAAAG
TCTCTTCATGCCACTATCAAGTCTACAAGATTTGGGATTCATTATCAAAC
CTCACAAAGATAATGTCTACAACGACATCCATAAAAGGATGGTAAGTTAT
TTATCCACAACTCCTTGGTAATCATAGATTGAACTTTTATCGATGTCATG
CTAGGATCTCCTTATCTAGAATGTAAAGATCTGAGATCAAACTGGCATAA
AACAAGCTAATATAAATAACACTGTTATTTTGGCATCGGATAGTGCAGAC
ACACTGTATATATTGTGAATGTTAATATACTGTAATCTCCACCAAATCTA
GACTTAGCTAGAGACATATCATACGAGCTGTATTCCTTATTGAAATTACA
GGACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGCCAAAC
AGTTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGTGTCCC
AATCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTC
CATCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGG
GGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGCATCCA
GTAAGTTCTTTTGTTCTTAATCATCGTGAAAAAGTTAAAAAGCCATACAA
TGTTGGAAAATAATATCCGAGGAAATTAATCTACTCAGATCTTTGAAATG
AAGAAAATCAAGATGTAAAATGAAAAAAAAAATAAGAATAGGGTCAATAT
ACTTTTTTTCATACTACACTTTAGGAATTGTTAACACTGAATTTGAAAGG
TAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATG
CTGGNCAAGTCTACAAGATTTGGGATTCATTATCAAACCTCACAAAGATA
ATGTCTACAACGACATCCATAAAAGGATGGTAAGTTATTTATCCACAACT
CCTTGGTAATCATAGATTGAACTTTTATCGATGTCATGCTAGGATCTCCT
TATCTAGAATGTAAAGATCTGAGATCAAACTGGCATAAAACAAGCTAATA
TAAATAACACTGTTATTTTGGCATCGGATAGTGCAGACACACTGTATATA
TTGTGAATGTTAATATACTGTAATCTCCACCAAATCTAGACTTAGCTAGA
GACATATCATACGAGCTGTATTCCTTATTGAAATTACAGGACATCAATTC
GAACTCCAACATCGAAGTACCAATCGAGATAGCCAAACAGTTGGGACTTC
TAAAACCTCCTGGAGCAGGAGGATGCCCACCGTGTCCCAATCCTCCTTGT
ACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCCATCTCAGAAGT
GCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCA
GTGTTGGTGATGCTCCACCTCCGGGTATTGTGCATCCAGTAAGTTCTTTT
GTTCTTAATCATCGTGAAAAAGTTAAAAAGCCATACAATGTTGGAAAATA
ATATCCGAGGAAATTAATCTACTCAGATCTTTGAAATGAAGAAAATCAAG
ATGTAAAATGAAAAAAAAAATAAGAATAGGGTCAATATACTTTTTTTCAT
ACTACACTTTAGGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACG
CATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACCAG
GCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTATT
GCATCCAAGATGCCAAAAGATGTGAGTTATATTTAGTGCATTCAATAAAT
TCCAATATTAAATTAGGCTTGCAATTAAGGCGATGCTATTCTGTAATGAA
TGTCATACTTGACATTGAAATCAATAAGAAGCTCAAAGGAAAGCACTGAT
ATATACTAAAACATTTCCTTGCAGAAACAATGTTCACCAGACATCGTGAG
CAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCAACCGTAAGTA
TTCATCAAGATATGTCTTCTCCTCAAATATGGTCAGTCAAGAACCTTTTA
TAAAATATCCCCATTTAATCATCAAAATTCATTGAATTAAATATAACTTT
ACTGCAATCGACAAGTATTTTAACTCATACCCATATGTAATAATCACGAC
ATTGAAGACATCATATAAAATTCAATTTAATCATTTTTAGAATACAACCT
TGTTAGCAGCCATAACATTGAACGTATTGAGTACACTTGCAAATCAAAGA
CACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCTCC
ACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGCCG
CTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGGGA
CAGCCAGCACCTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATGTGA
CGGAAACCAAGGCAGTAAGTATTAAATCAAGAAATATTTGTAGAAATCAA
AACATAAAATTATTTCACTGTGAGTCAAAAGGTAACCTTGTCTCCATAAA
GTCTAGTCTTAAATAATAAAGCTGTTGAAATGAATGAAGGAATAAATCCT
ACTACGAACCTCAGTTATATCAACTCTCTTGAAAATGTATATCATATATT
CTTTAGATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGC
GCTGACAAACAACAACCAGCTTGTAAACGATCTGGCACGTGCGCAACCGA
TCCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAACC
AAGCTAAAGCACAACAACAACAAAATCCTGTGGCCAAAGATTCTGCAACT
GTCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAATTGA
AAGCAATGCAACTGTCATTCATTGGGCATCTTTCATTTGTGCTATCTGTC
TATCTAAGTAGTAAATACATTACAATAAATTTGTTAAATAAAAATAGCGT
CTAATCGATATAAAATTTTTATTATAATTTTGATATTTCTCAATTCTTAT
GAATAATCAGATGGTTTGAGATGTTTTTGTTTGTTGAACCTTTCTGTGAG
CCCTGAGTAAAACCAAGAAATGCAAGTAGCAAGAATTCCAGTGTAAAAAG
CGTGTAAGTACCCAACTTAAAAAATTGTGATTGAAAAAAGTGAGGTAAAT
TGTTTTCGGATGTTTTGCTCAGCGTCATGAAAGGATTCTGCAGAAGAAAA
AANACTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATGTGACGGAAA
TCAAGGCAGTAAGTATTAAATCAGGAAATATTTGTAGAAATCAAAACATA
AAATTATTTCACTGTGAGTCAAAAGGTAACCTTTTCTCCATAAAGTCTAG
TCTTAAATAAGAAAGCTATTGAAATGAATGAAGGAATAAATCCTACTACG
GACCTCAGTTATATCAACTCTCTTGAAAATGTATATCATATATTCTTTAG
ATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGCGCTGAC
AAACAACAACCAGCTTGTAAACGATCTGGCACATGCGCAACCGATCCGTC
TAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAACCAAGCTA
AAGCACAACAACAACAAAATCCTGTGGCCAAAGATTCTGCAACTGTCTTG
GTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAATTGAAAGCAA
TGCAACTGTCATTCATTGGGCATCTTTCATTTGTGCTGTCTGTCTATCTA
AGTAGTAAATACATTACAATAAATTTGTTAAATAAAAATAGCGTCTAATC
GATATAAAATTTTTATTATAATTTTGATATTTCTCAATTCTTATGACTAA
TCAGATGGTTTGAGATGTTTTTGTTTGTTGAACCTTTCTGTGAGCCCTGA
GTAAAACCAAGAAATGCAAGTAGCAAGAATTCCAGTGTAAAAAGCGTGTA
AGTACCCAACTTAAAAAATTGTGATTGAAAAAAGTGAGGTAAATTGTTTT
CGGATGTTTTGCTCAGCGTCATGAAAGGATTCTGCAGAAGAAAAAAATCT
CAAACAATCTTTTTTATGAGTTATTTGACCTATACACATCACATGTACAT
AAATTTCATTTTATTTAAAAATACTAAATAGAAAATAGAAAATAATGATT
TAAAAAATGCAAATCAAAAAAGTTTTCGTAGCTTCGTTTATGTCCAAAAA
GTAAACCAATGTGGTAAAACATACAGCGGATACCTACCCTGTCCCAACAA
TATTTCAGCAGCTCAATTGTTCGTTTGTCCGTTCAACAAGCAAGGAGCTG
TCATAATTCATAATAACACCTTACTCTTTTGTCATGTAATCACAAAAATG
AAGCAAGAAAGCAAACAACAACATACAGGTATGCCTGATAGTCCATACTT
GAAACAGCTATCTAAGTGAGATACATTCTTCATTCCTCATCTTTTTCATG
CTCTTTCTCACAATGTTCCTTAGATGAGATGAAGGCTAAAGGCGCCATAC
CAATGATACAACCTATCACGATGCCAATCGCACGACCCTGAGTTGTGAAA
AAATCCAACAAACAATTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTT
CATATCAGGCACATATTTTATATCAGGACAGTGTGTTGCCATTGTTATAT
TATGCTGATATAAGCAAAAAATGTTGTTTTTTCCTCTTTCTGATCAATCT
TGCTCCACATCCGTG

Coding sequence (CDS) from alignment at sc0000080:239496..244710-

>TCONS_00007893 ID=TCONS_00007893|Name=TCONS_00007893|organism=Clytia hemisphaerica|type=CDS|length=6951bp|location=Sequence derived from alignment at sc0000080:239496..244710- (Clytia hemisphaerica)
ATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGCGCTGAC
AAACAACAACCAGCTTGTAAACGATCTGGCACATGCGCAACCGATCCGTC
TAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAACCAAGCTA
AAGCACAACAACAACAAAATCCTGTGGCCAAAGATTCTGCAACTGTCTTG
GTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAGTGACGGAAAT
CAAGGCAAATACAACCTTGTTAGCAGCCATAACATTGAACGTATTGAGTA
CACTTGCAAATCAAAGACACGAAAAACCTAAGTCCATTCTCGTCAAACAA
AAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCC
TCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCACCTTCACCTC
CATCGCCACCCTCGGGACAGCCAGCACCTGCTGCACCACCTTGTCCTGCA
GGACCAGGGAAATAAACAATGTTCACCAGACATCGTGAGCAACCTTCGTG
CAAGATTGGAGAAAGTGGAGAAATGTGCAACCGAATTGTTAACACTGAAT
TTGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGACCACC
AGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAG
AACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGATGACATCAAT
TCGAACTCCAACATCGAAGTACCAATCGAGATAGCCAAACAGTTGGGACT
TCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGTGTCCCAATCCTCCTT
GTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCCATCTCAGAA
GTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTT
CAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGCATCCAATGATGCCAA
TGTCCAATCAGATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAAC
AACCAGCTTGTAAACGATCTGGCACATGCGCAACCGATCCGTCTAAAACA
GCCAATGCATTGCAAACACTACAACAGCTTCTAAACCAAGCTAAAGCACA
ACAACAACAAAATCCTGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATG
GTGTACCGGTTAAAATACCGCTCGGGAAATAAGTGACGGAAATCAAGGCA
AATACAACCTTGTTAGCAGCCATAACATTGAACGTATTGAGTACACTTGC
AAATCAAAGACACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCC
CTCCACCTCCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCT
CAACCTGCCGCTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCC
ACCCTCGGGACAGCCAGCACCTGCTGCACCACCTTGTCCTGCAGGACCAG
GGAAATAAACAATGTTCACCAGACATCGTGAGCAACCTTCGTGCAAGATT
GGAGAAAGTGGAGAAATGTGCAACCGAATTGTTAACACTGAATTTGAAAG
GTAAAGATGGACGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGAT
GCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGG
TGATGAATGTATTGCATCCAAGATGCCAAAAGATGACATCAATTCGAACT
CCAACATCGAAGTACCAATCGAGATAGCCAAACAGTTGGGACTTCTAAAA
CCTCCTGGAGCAGGAGGATGCCCACCGTGTCCCAATCCTCCTTGTACTGG
AGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCCATCTCAGAAGTGCAGA
TCAATGGTAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTT
GGTGATGCTCCACCTCCGGGTATTGTGCATCCAATGATGCCAATGTCCAA
TCAGATGTCAAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCAGC
TTGTAAACGATCTGGCACATGCGCAACCGATCCGTCTAAAACAGCCAATG
CATTGCAAACACTACAACAGCTTCTAAACCAAGCTAAAGCACAACAACAA
CAAAATCCTGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACC
GGTTAAAATACCGCTCGGGAAATAAGTGACGGAAATCAAGGCAAATACAA
CCTTGTTAGCAGCCATAACATTGAACGTATTGAGTACACTTGCAAATCAA
AGACACGAAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACC
TCCACCACCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTG
CCGCTCCACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCG
GGACAGCCAGCACCTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATA
AACAATGTTCACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAA
GTGGAGAAATGTGCAACCGAATTGTTAACACTGAATTTGAAAGGTAAAGA
TGGACGCATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATGCTGGCC
CACCAGGCTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAA
TGTATTGCATCCAAGATGCCAAAAGATGACATCAATTCGAACTCCAACAT
CGAAGTACCAATCGAGATAGCCAAACAGTTGGGACTTCTAAAACCTCCTG
GAGCAGGAGGATGCCCACCGTGTCCCAATCCTCCTTGTACTGGAGGTCCT
GCAGGATGTGATGTCAAAGCTAAGTCCATCTCAGAAGTGCAGATCAATGG
TAAAGGTGATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATG
CTCCACCTCCGGGTATTGTGCATCCAATGATGCCAATGTCCAATCAGATG
TCAAGATCGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAA
CGATCTGGCACATGCGCAACCGATCCGTCTAAAACAGCCAATGCATTGCA
AACACTACAACAGCTTCTAAACCAAGCTAAAGCACAACAACAACAAAATC
CTGTGGCCAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAA
ATACCGCTCGGGAAATAAGTGACGGAAATCAAGGCAAATACAACCTTGTT
AGCAGCCATAACATTGAACGTATTGAGTACACTTGCAAATCAAAGACACG
AAAAACCTAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCTCCACCA
CCGCCCGCTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCC
ACCAGCACCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGGGACAGC
CAGCACCTGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATAAACAATG
TTCACCAGACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGA
AATGTGCAACCGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACGC
ATTGGAAAACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACCAGG
CTCACAAGGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTATTG
CATCCAAGATGCCAAAAGATGACATCAATTCGAACTCCAACATCGAAGTA
CCAATCGAGATAGCCAAACAGTTGGGACTTCTAAAACCTCCTGGAGCAGG
AGGATGCCCACCGTGTCCCAATCCTCCTTGTACTGGAGGTCCTGCAGGAT
GTGATGTCAAAGCTAAGTCCATCTCAGAAGTGCAGATCAATGGTAAAGGT
GATTACAGTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACC
TCCGGGTATTGTGCATCCAATGATGCCAATGTCCAATCAGATGTCAAGAT
CGACCTGACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAACGATCTG
GCACATGCGCAACCGATCCGTCTAAAACAGCCAATGCATTGCAAACACTA
CAACAGCTTCTAAACCAAGCTAAAGCACAACAACAACAAAATCCTGTGGC
CAAAGATTCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAAATACCGC
TCGGGAAATAAGTGACGGAAATCAAGGCAAATACAACCTTGTTAGCAGCC
ATAACATTGAACGTATTGAGTACACTTGCAAATCAAAGACACGAAAAACC
TAAGTCCATTCTCGTCAAACAAAAACGCCCTCCACCTCCACCACCGCCCG
CTGCACCAGCCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCA
CCCGCTAGTCCACCTTCACCTCCATCGCCACCCTCGGGACAGCCAGCACC
TGCTGCACCACCTTGTCCTGCAGGACCAGGGAAATAAACAATGTTCACCA
GACATCGTGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGC
AACCGAATTGTTAACACTGAATTTGAAAGGTAAAGATGGACGCATTGGAA
AACCAGGACCCAAGGGACCACCAGGAGATGCTGGCCCACCAGGCTCACAA
GGTCCAATGGGTCCCAAAGGAGAACAAGGTGATGAATGTATTGCATCCAA
GATGCCAAAAGATGACATCAATTCGAACTCCAACATCGAAGTACCAATCG
AGATAGCCAAACAGTTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGC
CCACCGTGTCCCAATCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGT
CAAAGCTAAGTCCATCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACA
GTGCACCAGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGT
ATTGTGCATCCAATGATGCCAATGTCCAATCAGATGTCAAGATCGACCTG
ACAGGAGGCGCTGACAAACAACAACCAGCTTGTAAACGATCTGGCACATG
CGCAACCGATCCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAGC
TTCTAAACCAAGCTAAAGCACAACAACAACAAAATCCTGTGGCCAAAGAT
TCTGCAACTGTCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGAA
ATAAGTGACGGAAATCAAGGCAAATACAACCTTGTTAGCAGCCATAACAT
TGAACGTATTGAGTACACTTGCAAATCAAAGACACGAAAAACCTAAGTCC
ATTCTCGTCAAACAAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACC
AGCCCCTCCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTA
GTCCACCTTCACCTCCATCGCCACCCTCGGGACAGCCAGCACCTGCTGCA
CCACCTTGTCCTGCAGGACCAGGGAAATAAACAATGTTCACCAGACATCG
TGAGCAACCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCAACCGAA
TTGTTAACACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAAACCAGG
ACCCAAGGGACCACCAGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAA
TGGGTCCCAAAGGAGAACAAGGTGATGAATGTATTGCATCCAAGATGCCA
AAAGATGACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGC
CAAACAGTTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGT
GTCCCAATCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCT
AAGTCCATCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACC
AGTGGGGCCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGC
ATCCAATGATGCCAATGTCCAATCAGATGTCAAGATCGACCTGACAGGAG
GCGCTGACAAACAACAACCAGCTTGTAAACGATCTGGCACATGCGCAACC
GATCCGTCTAAAACAGCCAATGCATTGCAAACACTACAACAGCTTCTAAA
CCAAGCTAAAGCACAACAACAACAAAATCCTGTGGCCAAAGATTCTGCAA
CTGTCTTGGTGAATGGTGTACCGGTTAAAATACCGCTCGGGAAATAAGTG
ACGGAAATCAAGGCAAATACAACCTTGTTAGCAGCCATAACATTGAACGT
ATTGAGTACACTTGCAAATCAAAGACACGAAAAACCTAAGTCCATTCTCG
TCAAACAAAAACGCCCTCCACCTCCACCACCGCCCGCTGCACCAGCCCCT
CCTCCGCCTCCTGCTCAACCTGCCGCTCCACCAGCACCCGCTAGTCCACC
TTCACCTCCATCGCCACCCTCGGGACAGCCAGCACCTGCTGCACCACCTT
GTCCTGCAGGACCAGGGAAATAAACAATGTTCACCAGACATCGTGAGCAA
CCTTCGTGCAAGATTGGAGAAAGTGGAGAAATGTGCAACCGAATTGTTAA
CACTGAATTTGAAAGGTAAAGATGGACGCATTGGAAAACCAGGACCCAAG
GGACCACCAGGAGATGCTGGCCCACCAGGCTCACAAGGTCCAATGGGTCC
CAAAGGAGAACAAGGTGATGAATGTATTGCATCCAAGATGCCAAAAGATG
ACATCAATTCGAACTCCAACATCGAAGTACCAATCGAGATAGCCAAACAG
TTGGGACTTCTAAAACCTCCTGGAGCAGGAGGATGCCCACCGTGTCCCAA
TCCTCCTTGTACTGGAGGTCCTGCAGGATGTGATGTCAAAGCTAAGTCCA
TCTCAGAAGTGCAGATCAATGGTAAAGGTGATTACAGTGCACCAGTGGGG
CCAGTTTTCAGTGTTGGTGATGCTCCACCTCCGGGTATTGTGCATCCAAT
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004463XLOC_004463Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007893-proteinTCONS_00007893-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007893-exon-sc0000080-1575043694:244461..244710TCONS_00007893-exon-sc0000080-1575043694:244461..244710Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:244170..244271TCONS_00007893-exon-sc0000080-1575043694:244170..244271Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:243661..243909TCONS_00007893-exon-sc0000080-1575043694:243661..243909Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:243332..243486TCONS_00007893-exon-sc0000080-1575043694:243332..243486Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:242823..243071TCONS_00007893-exon-sc0000080-1575043694:242823..243071Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:242490..242648TCONS_00007893-exon-sc0000080-1575043694:242490..242648Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:242268..242336TCONS_00007893-exon-sc0000080-1575043694:242268..242336Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:241815..242070TCONS_00007893-exon-sc0000080-1575043694:241815..242070Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:240953..240970TCONS_00007893-exon-sc0000080-1575043694:240953..240970Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1575043694:239496..240760TCONS_00007893-exon-sc0000080-1575043694:239496..240760Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:244461..244710TCONS_00007893-exon-sc0000080-1510915933:244461..244710Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:244170..244271TCONS_00007893-exon-sc0000080-1510915933:244170..244271Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:243661..243909TCONS_00007893-exon-sc0000080-1510915933:243661..243909Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:243332..243486TCONS_00007893-exon-sc0000080-1510915933:243332..243486Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:242823..243071TCONS_00007893-exon-sc0000080-1510915933:242823..243071Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:242490..242648TCONS_00007893-exon-sc0000080-1510915933:242490..242648Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:242268..242336TCONS_00007893-exon-sc0000080-1510915933:242268..242336Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:241815..242070TCONS_00007893-exon-sc0000080-1510915933:241815..242070Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:240953..240970TCONS_00007893-exon-sc0000080-1510915933:240953..240970Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1510915933:239496..240760TCONS_00007893-exon-sc0000080-1510915933:239496..240760Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:244461..244710TCONS_00007893-exon-sc0000080-1491911889:244461..244710Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:244170..244271TCONS_00007893-exon-sc0000080-1491911889:244170..244271Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:243661..243909TCONS_00007893-exon-sc0000080-1491911889:243661..243909Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:243332..243486TCONS_00007893-exon-sc0000080-1491911889:243332..243486Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:242823..243071TCONS_00007893-exon-sc0000080-1491911889:242823..243071Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:242490..242648TCONS_00007893-exon-sc0000080-1491911889:242490..242648Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:242268..242336TCONS_00007893-exon-sc0000080-1491911889:242268..242336Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:241815..242070TCONS_00007893-exon-sc0000080-1491911889:241815..242070Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:240953..240970TCONS_00007893-exon-sc0000080-1491911889:240953..240970Clytia hemisphaericaexon
TCONS_00007893-exon-sc0000080-1491911889:239496..240760TCONS_00007893-exon-sc0000080-1491911889:239496..240760Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:239496..244710 -
Expression
No biomaterial libraries express this feature.
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008160Collagen
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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