TCONS_00007893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007893-protein
Unique NameTCONS_00007893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007893-protein ID=TCONS_00007893-protein|Name=TCONS_00007893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MDINSNSNIEVPIEIAKQLGLLKPPGAGGCPPCPNPPCTGGPAGCDVKAK
SISEVQINGKGDYSAPVGPVFSVGDAPPPGIVHPELLTLNLKGKDGRIGK
PGPKGPPGDAGPPGSQGPMGPKGEQGDECIASKMPKDKQCSPDIVSNLRA
RLEKVEKCATNTTLLAAITLNVLSTLANQRHEKPKSILVKQKRPPPPPPP
AAPAPPPPPAQPAAPPAPASPPSPPSPPSGQPAPAAPPCPAGPGKCDGNQ
GNANVQSDVKIDLTGGADKQQPACKRSGTCATDPSKTANALQTLQQLLNQ
AKAQQQQNPVAKDSATVLVNGVPVKIPLGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004463XLOC_004463Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007893TCONS_00007893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008160Collagen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..141
IPR008160Collagen triple helix repeatPFAMPF01391Collagencoord: 92..128
e-value: 6.5E-7
score: 28.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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