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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007868 ID=TCONS_00007868|Name=TCONS_00007868|organism=Clytia hemisphaerica|type=transcript|length=982bp
GTTCCTTTGGCTTTTctactttttcaacttttttcttttctgcttGTTTA
AAAAGATCCTCTTCGATCAAATAATCTGGCTCTACACCATCCACCTCGAT
GACTTTATTCCAAACACTGCTACTGTTTCGTTTCAAAACGTGAGTTGGAA
TCTTATTCCATTGAAGCTTCTTCATTTTACTACTTGGTGTGCGTGTTGGT
TTGATCTTAGAAGTTGGTCCGTCCGGTACAGTTTGCGCAAAGCctggtgg
aggtggtggtggTACTCCTCCAAACATAGGTGGTGGTGGAGGAGCTCCCA
TTCCAggtggtggtggaggtggaGGTACCCCTCCCATACCTGGCGGTGGC
GGTGGAGGGGGTACTCCACCCATACCTGGAGGTGGAGGTGGTGGCGGAGG
AACTCCCATGCCAGGCGGAGGAGGTGGTGGAGGTACTCCTGCCATAcctg
gaggtggtggaggtggaggTGGCGGTGGGGGTCCACCCATTCCAGGTGGA
GGTGGTGGGGGCATCATACCTCCTGGTGGTGGGGGAGGTGGAGGAGGTGG
TGGTGGTGCTCCCATACCTGGTGGAGGAGGGGGAGGAGGAggcggtggtg
gtggtggagCAGCAACCGGTGCAGGAGAAGCGCCTGGGTTGGCGATACCA
GGTAATGCAACTGCACCACTGGGTAATTTCTTTGGTACTGCATCAGTCTG
TGTCTCTTTGACCATAGTGACtggctttttcttttcttttaataagTCCG
TTTGTATAGCTACTGTTTGTGTACGCTCAAAAGCATTCGATATTTTCTTT
AGTTCCTGTTCTGCTCGTCTTTTTCCAGCCAGCTCTTGCTTTTCATTGGT
GATATAAACAGCTCTAACGACGATATCTTCGATGATTTCCCACACACGAT
CACTGTACTCACTTTCAACGTCGATCATCAACAAACTTTGTAAAATACGA
AGAAAATTGTTGGCGATTGGCTTGTTGGCAat Run BLAST on NCBI transcript from alignment at sc0000080:678663..679791+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007868 ID=TCONS_00007868|Name=TCONS_00007868|organism=Clytia hemisphaerica|type=transcript|length=1129bp|location=Sequence derived from alignment at sc0000080:678663..679791+ (Clytia hemisphaerica)
GTTCCTTTGGCTTTTctactttttcaacttttttcttttctgcttGTTTA
AAAAGATCCTCTTCGATCAAATAATCTGGCTCTACACCATCCACCTCGAT
GACTTTATTCCAAACACTGCTACTGTTTCGTTTCAAAACGTGAGTTGGAA
TCTTATTCCATTGAAGCTTCTTCATTTTACTACTTGGTGTGCGTGTTGGT
TTGATCTTAGAAGTTGGTCCGTCCGGTACAGTTTGCGCAAAGCctggtgg
aggtggtggtggTACTCCTCCAAACATAGGTGGTGGTGGAGGAGCTCCCA
TTCCAggtggtggtggaggtggaGGTACCCCTCCCATACCTGGCGGTGGC
GGTGGAGGGGGTACTCCACCCATACCTGGAGGTGGAGGTGGTGGCGGAGG
AACTCCCATGCCAGGCGGAGGAGGTGGTGGAGGTACTCCTGCCATAcctg
gaggtggtggaggtggaggTGGCGGTGGGGGTCCACCCATTCCAGGTGGA
GGTGGTGGCGGAGGAACTCCCATGCCAGGCGGAGGGGGGGGTGGAGGTAC
TCCTGCCATAcctggaggtggtggaggtggaggTGGCGGTGGGGGTCCAC
CCATTCCAGGTGGAGGTGGTGGCGGAGGAACTCCCATGCCAGGTGGAGGT
GGTGGGGGCATCATACCTCCTGGTGGTGGGGGAGGTGGAGGAGGTGGTGG
TGGTGCTCCCATACCTGGTGGAGGAGGGGGAGGAGGAggcggtggtggtg
gtggagCAGCAACCGGTGCAGGAGAAGCGCCTGGGTTGGCGATACCAGGT
AATGCAACTGCACCACTGGGTAATTTCTTTGGTACTGCATCAGTCTGTGT
CTCTTTGACCATAGTGACtggctttttcttttcttttaataagTCCGTTT
GTATAGCTACTGTTTGTGTACGCTCAAAAGCATTCGATATTTTCTTTAGT
TCCTGTTCTGCTCGTCTTTTTCCAGCCAGCTCTTGCTTTTCATTGGTGAT
ATAAACAGCTCTAACGACGATATCTTCGATGATTTCCCACACACGATCAC
TGTACTCACTTTCAACGTCGATCATCAACAAACTTTGTAAAATACGAAGA
AAATTGTTGGCGATTGGCTTGTTGGCAat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007868-exon-sc0000080-1491911889:678663..679157 | TCONS_00007868-exon-sc0000080-1491911889:678663..679157 | Clytia hemisphaerica | exon |
| TCONS_00007868-exon-sc0000080-1510915933:678663..679157 | TCONS_00007868-exon-sc0000080-1510915933:678663..679157 | Clytia hemisphaerica | exon |
| TCONS_00007868-exon-sc0000080-1575043694:678663..679157 | TCONS_00007868-exon-sc0000080-1575043694:678663..679157 | Clytia hemisphaerica | exon |
| TCONS_00007868-exon-sc0000080-1491911889:679305..679791 | TCONS_00007868-exon-sc0000080-1491911889:679305..679791 | Clytia hemisphaerica | exon |
| TCONS_00007868-exon-sc0000080-1510915933:679305..679791 | TCONS_00007868-exon-sc0000080-1510915933:679305..679791 | Clytia hemisphaerica | exon |
| TCONS_00007868-exon-sc0000080-1575043694:679305..679791 | TCONS_00007868-exon-sc0000080-1575043694:679305..679791 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:678663..679791 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR015425 | FH2_Formin |
Blast
The following BLAST results are available for this feature:
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