TCONS_00007300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007300
Unique NameTCONS_00007300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007300 ID=TCONS_00007300|Name=TCONS_00007300|organism=Clytia hemisphaerica|type=transcript|length=1470bp
CTATGATAGAGGttatattaaaataaaatttatttcaagtttatgtttat
gatacgtttaaaaaatgttattgacAATCGTGTAGGCGTTAAAATATAGT
CGATGGGAGAAGAAAAAATGCTGCTACTACAAACCAAAAGACTCACATCA
TTGGGTAAAAGAACGAAAATCTTGGACGCTCAAAGCAACCCACAAAAATC
CGACAACGACAAAAAGATGTCGAATAATTCAACGGCAACAACTACCCAGT
CGCCTTTCTTGGATGTCTTCACGCAACGAGAAATATATTTAATGTACATT
GGTTACGTCATCATAACCATATTCGGAATAAGTTCAAACTTAGCCGTTTG
TTTCGTCATTCTCAAATACCGACATCTTCGGGTCATCGTCAATATTCTCA
TATTAAATCTAGCGATATCTGACATAGTGGCATGTCTCAGCGTTTACCCA
TTCATTTTTGTTGATATCCCAGCTACGGGGTTACGTGGTAGATCGGCAAA
CGTGTTATGTGGTATTACGGAAGGTCTGAGCGTATTCTTCGTAGTAGCGA
CAGTATCATTACTAACGTTGAGCGTTCTGTCAATCAGCCGCTACATCGTT
ATCAATCATCCTCTCCGCTTGAATTGGAGGCTCAAGAAAGGTAgcattaa
atatatttttacaatCATATGGATCACGAGTGCTGCCTTATTAATCCCGA
GCAGTGTTTCATTTAGTTACAATGAGGAAAAACAATTCTGTTTCCGTGAA
TGGGCGCCTGGCATTCACTCCTTCACCTACTTTATGTTCACAGGACTCCT
TGGTTTCTTTATACCGATATTCTCATTAACTTTTACGTACTGTACGTCAG
TTTACACACTATGGTTTAAAAgatcgaatgtctcaaatacaCGATTCAGT
GGCTCGTCCCAGCCTCCTGGTAATATGCGAGTCAAGAAACGAGTCAGTAT
CCTACTTGGTCTGTTAATAGTAGTATATCTCCTATGTTGGATGCCTTTTG
CTATCTACTGGCTACTATCAGCTGGAATCGGGTATTACGACCAATCAGAT
GAAAAACTAATCGAGGGGATTCGATTTAATCGGATAACGGTATTCATCGC
TTTATGTAATACAGTTTTGAACCCGATTGTTTACGCGTTCACGAACGCTC
ATTTAAGAACTGCTTTTTGGTATTGCTTACAATGTAAGAAGCTGAATGCG
GTGGCCCAGAGGACTAGCATGACCGGTGGCCCAACTTTGGTATCTTACAC
GGCGGCAAGGAGGCATACTATACACCCAGGATCCGATATCGAACTGAGAA
CAATGGGTAGACCAAGAGAGATGACCTTGTGATGAAACAATAAACACACg
attacaaacaaacaaataagaTACATTTTTTCAATCCGTTTTCTAAGTGT
GTTAACATTCTTGAAAAAcgacattaaattatttttgattatttttgtat
AGTTTGTATACAGTGTGTCA
Run BLAST on NCBI

protein sequence of TCONS_00007300-protein

>TCONS_00007300-protein ID=TCONS_00007300-protein|Name=TCONS_00007300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MGEEKMLLLQTKRLTSLGKRTKILDAQSNPQKSDNDKKMSNNSTATTTQS
PFLDVFTQREIYLMYIGYVIITIFGISSNLAVCFVILKYRHLRVIVNILI
LNLAISDIVACLSVYPFIFVDIPATGLRGRSANVLCGITEGLSVFFVVAT
VSLLTLSVLSISRYIVINHPLRLNWRLKKGSIKYIFTIIWITSAALLIPS
SVSFSYNEEKQFCFREWAPGIHSFTYFMFTGLLGFFIPIFSLTFTYCTSV
YTLWFKRSNVSNTRFSGSSQPPGNMRVKKRVSILLGLLIVVYLLCWMPFA
IYWLLSAGIGYYDQSDEKLIEGIRFNRITVFIALCNTVLNPIVYAFTNAH
LRTAFWYCLQCKKLNAVAQRTSMTGGPTLVSYTAARRHTIHPGSDIELRT
MGRPREMTL
Run BLAST on NCBI

transcript from alignment at sc0000075:239814..248629-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007300 ID=TCONS_00007300|Name=TCONS_00007300|organism=Clytia hemisphaerica|type=transcript|length=8816bp|location=Sequence derived from alignment at sc0000075:239814..248629- (Clytia hemisphaerica)
CTATGATAGAGGTTATATTAAAATAAAATTTATTTCAAGTTTATGTTTAT
GATACGTTTAAAAAATGTTATTGACAATCGTGTAGGCGTTAAAATATAGT
CGATGGGAGAAGAAAAAATGTATAGACATGTTTTGAGGTATAGACAGTTC
CGAGTCTCGTGCCCAAAATAATCTTTCGCTCGTGATCGGAAATACTGCAT
GGCATGTATGTCTATATCTATATCTATTTTATTGGTTTTACTTAAACTAC
TACTTTGGCCAATGCGACTCAAATGAGAACTTTCTCGTGCACCCCTGTCT
CAGTGACCCAGAGGAACTTTTTCCATCAGAGAGGATGAAAACGCCTACCT
ATCTAAATACCAATGGGAAAAAAAATTTCCAGCCCAAAGACATAGGGATT
TGGAATTTTCTAATTTCAAAAATATATACTTTGACTAGGAAATATCATTA
AAAATTTGCAATATTCAACAGAATGTAAAGTAGATTGACTGATTTTTCTG
AAAAGAAATTTCTTACACAATGTAAAATTCCGGGGGTGACAAAGTGGTTT
ACTTTACATTCTGTTGAATATTGCAAATTTCAAATTATATTTCCTAGTAA
AAGTATATATTTTTGAAATTGCCAAGCTTTAAACTTTCCAAAGATGTAAA
AATAACGTTTATGCGACCTATCTATTAAAAGTTGAATTTTTTCGTCTTCA
TCTTTCTTCATGTTCTTTTCAAATTTCACTGAAAAAACTAACATTAAATT
AATAAGCTCCTTCCTACCTTCCCAATGATACCAAGCTTTTTAAGATTGAG
AAATAACAAGCAAAGCAAAATTTAGTGCACACTTATCGTGAATAGACTTA
AGGTTGGGATCTAAACCCAACCTCAATTAATGTAATACACACCTGAACCA
AAAATACGGCATCGTTGATTTTCTTAGCATTCGGCCACTTTCATCATGAA
TATTCTTATTAAATACATTCTTTAAAATTAGTCATCTTTGACTTGCTACC
CACAACGTCTCCTAAGGTTGAGAGGGCGGTGTAACTGAATGCCAGGCACT
TTACTATTTTTAGCATAGCACCTCTTCACTTTTTGAATATTACTCTTAAG
ATTTCAATTTTCAAGTTAATGAATCCTTATCATCAAGTCGAATAATCTGC
GAACTTAACATGACAAGATGGATCACTCCTGTTGTTTTACAGACACAATG
AAAATTACCCTATGTGTAAAATATTGACATGTTATCGGATCTTTGAATTA
CTTTTCGCTTTAACATGCTCAATGTAAACAGCCTCTCCTTTTTAGTAAGA
ATATTTATACGAAAGATTGCTGCTACTACCTTCAAATTTAGTTTCAGAAC
CTAATTAAGGGGGTAGTCATATGAGAAATTTGAAATGTAATTTTTTAAAC
TTTTTGTTATATCTTCTGAAGTAGTATATATTTTTCAATGAAACTTTCCA
CAATTGTAGCACAACTATAAAGGATTTGAAAAATTAAAAAAAAATTCTAA
AAATAGCAAAGACGGGGGTAATATCGTCCAGGGGGTAAAAGCTATAAAAA
TATTGTGTCAACCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGAAAATTGTATACCAGGGCTCATAAGAAACCCAATATCTCGGCA
GATATTTATGCTACGGCCTTGAAATTTTCAGGGTATGTTCAGGAAGGATA
AAGGATCCTAAATAACCCTAAATCCCGAAATTGATAAATTTTTCACCAAT
TTTCAAAATCTCATATGACTACCCCCTTAAATCTAAATTGACTACAATGT
ACAAATAGGAGAATAGATCAGCAATTTCGAAGATAAATCCGCTTTGACTA
CTTTCTTATTTAACTGATGTGCAAGTTGGGTCTTGCAATCGTTTGAATTA
AGTACAATTTTTTTAGTTAGGTTTGACAACCTATGTATGACTTTAATGAA
AGATGATACTTGTAAGCTTGTTTTTCAATATCGTATGTAGATGAGCATAA
GAGTTGTATTTGATTAAAAATTTTCATTTAGAATCAGTCTGTTTGTCCAC
NAAGAGTTGTATTTGATTAAAAATTTTCATTTTAGAATCAGTCTGTTTGT
CCATTATGTGAGAGAAAATTTCTTTATTATCAAATTTAATACTAGCAGGT
CAATTTTCAACATCAAGGTCAAATGAATTCCAATCATTTAAGACCTTACA
ATCTCTCCGATTTCCAATGGGTCAATTAGGTAAAATTGGGTACATTTTTA
AAGTACACACCCCTACACATTGTGCTGGTTCTTTAGANGATTTCCAATGG
GTCAATTAGGTAAAATTGGGTACATTTTTAAAGTACACACCCCTACACAT
TGTGTTGGTTCTTTAGACGTGTCTATGTCAGTGATTTTTTAAGAGATAAA
GCCCTTCCAATAAACGGAAGAGGCCCTATCCAGGACAGAATTCGCTATCC
TAGGATATGGAAATCACTGCGTATATCTGACCCTGCCAACCCGTGCTCGT
GAGAGACAGAGAGAGCTGATGGTGTACTATATAGTAACTATACTCGAATA
ACTCGGGAGGACAGTGCATCCTCGCATCCTACATACAAAGTATGGAATAC
CTCCTAACACTCTTGTATCAGAGCATGGTACCCAATATCCCCCTAACATG
GCACTTATTGACCCGGGAGGTACATTCACTTGCGAAGTGTGAGAATCAAA
CCCATACCATTGAGTTTAAAGCCCCTTTTATCGCACATGTGTCAATCTAA
TCACTGTAGAAAGAATCAAAGATGGAGAACAAATATTACCATATTAATGT
CTAGAGCTGACTGTATCAATATACATGTTTACTATTGACGAATTCCCCAA
AAACCTCCAAGTGTAATCGGAGTGGGTTTCTTTCAAAAGAAATCTTCTAC
ATGATTTATAAATGTATAACAGTAATTACTAAACTATTAATTATGGTAAT
GTTACTTCAATGGAATTGAAATAATACACAAATTTTTATGTTATCATTCT
CTATCACTGATTATTTTTAAAAAGCGTTGATGACATTTTTGAGTTGTGTT
TTCAACGACGCAAAAAGAAATATGAACTTTGAACTTAATCCAAGGTCTTG
GATTGTCGTCATGGTTACTTTTGTCTGCGTTGATTGTGCGCTGAATAGAA
TCCGGATTGGTCAGCACAGGTTGATCAAGGACACTTGTATAGCGTAGCAA
GTGTCCTTGGGTTGATATATGATTTCGGCCTCTGCTTTTGACCGTACCTT
TTTCAAGCAAGAAAAAGTGAAGCCTTAAGATTTGCGCCGCATTTAGAATG
ACGGTTTAAATCTAGCACTTTCTTTGTTTTCACGCAGCATATTTTTCGAA
ATGTGGCGATATATTTTACTTTCAATCTAGCGTTGGTTTGAAAACCACGC
GGGTCACGGAAGAGAAGTAAGTGGCTTAATTTCCCATCCAGTAGTCTCGT
GTCTAGCCCTCCGGACTTGGAAGTCAATGACCCAGACCTCCTTCACGGAA
GTCAAGATCATAATCACTACTGCGTTTTTCTTTAATTTGTTGATCAACTT
ATGTACCAAAACTTACTTTCTTCTCAGTTACTTGTAGGGGCTTGATTAGT
TGTTCTCAGGACCTTCTGTCCCCTCCAAAGATTTTTTTGTTTCAAAGCTT
GGCTCTCAAGGATGTGTTCATCGTGGGCTCAGTTTAGAAAGATTGAATGA
CAACCTCGACGCCCCTTTTGCAAAAAATATCGGCGCTTGCGGTTTAAGGC
GTGAATGAATCATTTCCAAAAGAGTAGCAAAAAGATACGATTTTTAGTCT
CGACTTTGGCAATATAACGGAGACAGGAAGACACAAGAATGCTTTTAAAT
ATAAAATGGAAAATGATGATATTTTCTTTTCAAAGGAGTATCAAATTTCC
TTCGGATATATCCTTTTCCACTTTAAAAAATCTTTTTGATGGCTTCAGTT
CATTATCATTAGTCAAGTGGCTTGTACGCACACTTTAATAAGTTGTGGAA
GAATTTTATAGGTAAGGTTGTGTAATGCAATATAACTAAACCTTGGCATA
ATTCTAAGACACCCCGCCCTTGAGGGTTACTGCAATAAAGATATTTGATT
GGAGAAACTTTAAAAATGCTTGTAAGGTCGCATTGTGATACAAAGTTCTC
GTGATAACGGTCATCAGGGAAACCTTGATTATTATTGGCTCCTAAACTAT
CTTTAAGGGATCTGACCATATTTGCCACTTTCAAAATATGAATATCTGCC
AGATGTAGCGTACAAAACTTTGACATGTTATACATTTTCTGTTAGGCCAA
TTATCCGTGAGTCTGAAAATTTAAAAATTGTAATGAAAAAATTTGATGAA
GAAGAAAATGAAGACTTTTGCGAAGAAGAGTATTTCAACTTTGAAGAGCT
TAGTTTCGGCGAAGAAAAAAAAATTTGAAAATATTTTTGCGGTAGATGGT
GTATCTTTTATCGAACTAAAATCATCAAAATTTTTCTAAAAGCTTATTTG
CTTCAAAATCTTGAAAATGGTGCTTTTTGACCAATTTTCTATTCCAATTT
TTCATAGAAAAATAGCCATAACTTTTGATGTATTAGTTTAAAAAAATTTT
CCTAAAAATTTAAAACAGTTCAATTCTTTGCGGACAGTTTGAAAAAACTT
TGAAACAAAAAGGTTAATTACCCATTAAAACTTTTTATAAAAGAAGGTGA
TAACATCATTTTTGCAATTAAGTTCTTAATTAGTCTTAAGGGATATGATT
AAAAAGCAATTTATAAAGGCAATTCTTTGTTAAAATTGTTAAAGAATCTA
AAACGTAACTTTTATGTTCAGATACTAAAAGTAATTTTCCGACTATGGTC
AGAGCCCCTAAGGCAGATTATTTAACTACATTCATTGAAACCCCGGTGGG
CTAGAGAGGAATGAATCCCTCGATTTGGATGGGAAGTGAAGCCACTTATA
ACAGAGGCCACCCGAGCGATTTTTGTGATGGCGTGATTGGGAGTTTTTTC
TACTTTCGTGATTGTCTATCATAAGTCAAAACGTGATCGTAATTTGAAAT
ATTTTTGAGCCGTGATTTGGACTCTTTCAAAGGTGTGCGTGATTATCCAA
ATTTTTTGCTGATTTTCGTGATCGTGATTGAATACAAAAAATTGCGTGAT
ATCGTGATCTAACTTACTGCTGGGGGGCCTCATAAGACTCATCCGAAAAT
CATGGCCCTCGTGGTTTTCGGACAAAAGAAAGTAGATCCCATGCTCCAAG
TGAGCAAAATAAGAGTGGCGGGACGGGATGAAAGCGGCACCCTATCGCCA
ATTTTTCCTTGCTCTCCTACGCAGCTCTTATTTTATAAAACCCTAGTTTT
TGCTAGTCTATCCCTAACGTGCTCTAGATTAATTTTTGAGCGGTAAATAT
TATGTTAAAAATGAAGTATTCTGTGAAAAATGGCAAGCAAAACAAGGATT
AGTACACATTAAAGTGAATGGACTTTAAATACTACTACATATTTCTCAAA
TAGCAAAAAATACTCAAAATAGGGCAGCATAGTTAAATTTTCGAAGTTGT
ATCTGATGAGATCGATTTCTGATCATCTACAACACTGATGGGGTTTTTTA
TTTCATCGAACTTTTATCTGATAGGGATAGGGTAAATATTTGCTATAAAT
TGTTTGCTGGCCGGATCCATTTTTTGAGCTCTCGCCGCGTGTGTAGCCTC
TTTTTTGTTACACCTACGCCCTCCATCATACTGTGTTAACTTTTGTCCTC
TTCCAAAATCACGAAAACTCGTGCACTCAGACACACAATGCATTGCACAA
AAATGTTGTCAGAAAAAATATACAGCAACCCACAAAACCTAATTTCCGAA
AGAAAGCTACAAATAAACAAAAAACAATCCTCTTTGCCTTTCCAACCTCC
TTTTTATAGTCTCTCACTAAAATCTTAAAGGAAATCCTGGCAGACGAGCT
ATCGTCATTGAACAAGCAACGCAAGTTTTTCATCCCGGAAAATATCGGGT
TTAATTACAGTCTTTGTTCTTTGTTAGTTGACAGAGGATAGCTTCTTTAT
CTTCATTCTAACTTTTTGAAATATCAGTCTGTTTAATACAAAACCAACCA
ACAACGACCCTTCATAGGGCTCTTCTTTACCCTCACACCGTCATAGTTAG
CGTTTATTTGACCTTACAAAGACGTCATTGACGCTAGCAGAATATCTTCT
TGACATTTTTTTCATAGCTGAAGTTGTACTTTTGAATTGAAATATTGTTT
TCTCTTTTATGTTAGGCTGCTACTACAAACCAAAAGACTCACATCATTGG
GTAAAAGAACGAAAATCTTGGACGCTCAAAGCAACCCACAAAAATCCGAC
AACGACAAAAAGATGTCGAATAATTCAACGGCAACAACTACCCAGTCGCC
TTTCTTGGATGTCTTCACGCAACGAGAAATATATTTAATGTACATTGGTT
ACGTCATCATAACCATATTCGGAATAAGTTCAAACTTAGCCGTTTGTTTC
GTCATTCTCAAATACCGACATCTTCGGGTCATCGTCAATATTCTCATATT
AAATCTAGCGATATCTGACATAGTGGCATGTCTCAGCGTTTACCCATTCA
TTTTTGTTGATATCCCAGCTACGGGGTTACGTGGTAGATCGGCAAACGTG
TTATGTGGTATTACGGAAGGTCTGAGCGTATTCTTCGTAGTAGCGACAGT
ATCATTACTAACGTTGAGCGTTCTGTCAATCAGCCGCTACATCGTTATCA
ATCATCCTCTCCGCTTGAATTGGAGGCTCAAGAAAGGTAGCATTAAATAT
ATTTTTACAATCATATGGATCACGAGTGCTGCCTTATTAATCCCGAGCAG
TGTTTCATTTAGTTACAATGAGGAAAAACAATTCTGTTTCCGTGAATGGG
CGCCTGGCATTCACTCCTTCACCTACTTTATGTTCACAGGACTCCTTGGT
TTCTTTATACCGATATTCTCATTAACTTTTACGTACTGTACGTCAGTTTA
CACACTATGGTTTAAAAGATCGAATGTCTCAAATACACGATTCAGTGGCT
CGTCCCAGCCTCCTGGTAATATGCGAGTCAAGAAACGAGTCAGTATCCTA
CTTGGTCTGTTAATAGTAGTATATCTCCTATGTTGGATGCCTTTTGCTAT
CTACTGGCTACTATCAGCTGGAATCGGGTATTACGACCAATCAGATGAAA
AACTAATCGAGGGGATTCGATTTAATCGGATAACGGTATTCATCGCTTTA
TGTAATACAGTTTTGAACCCGATTGTTTACGCGTTCACGAACGCTCATTT
AAGAACTGCTTTTTGGTATTGCTTACAATGTAAGAAGCTGAATGCGGTGG
CCCAGAGGACTAGCATGACCGGTGGCCCAACTTTGGTATCTTACACGGCG
GCAAGGAGGCATACTATACACCCAGGATCCGATATCGAACTGAGAACAAT
GGGTAGACCAAGAGAGATGACCTTGTGATGAAACAATAAACACACGATTA
CAAACAAACAAATAAGATACATTTTTTCAATCCGTTTTCTAAGTGTGTTA
ACATTCTTGAAAAACGACATTAAATTATTTTTGATTATTTTTGTATAGTT
TGTATACAGTGTGTCA

Coding sequence (CDS) from alignment at sc0000075:239814..248629-

>TCONS_00007300 ID=TCONS_00007300|Name=TCONS_00007300|organism=Clytia hemisphaerica|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000075:239814..248629- (Clytia hemisphaerica)
GCTGCTACTACAAACCAAAAGACTCACATCATTGGGTAAAAGAACGAAAA
TCTTGGACGCTCAAAGCAACCCACAAAAATCCGACAACGACAAAAAGATG
TCGAATAATTCAACGGCAACAACTACCCAGTCGCCTTTCTTGGATGTCTT
CACGCAACGAGAAATATATTTAATGTACATTGGTTACGTCATCATAACCA
TATTCGGAATAAGTTCAAACTTAGCCGTTTGTTTCGTCATTCTCAAATAC
CGACATCTTCGGGTCATCGTCAATATTCTCATATTAAATCTAGCGATATC
TGACATAGTGGCATGTCTCAGCGTTTACCCATTCATTTTTGTTGATATCC
CAGCTACGGGGTTACGTGGTAGATCGGCAAACGTGTTATGTGGTATTACG
GAAGGTCTGAGCGTATTCTTCGTAGTAGCGACAGTATCATTACTAACGTT
GAGCGTTCTGTCAATCAGCCGCTACATCGTTATCAATCATCCTCTCCGCT
TGAATTGGAGGCTCAAGAAAGGTAGCATTAAATATATTTTTACAATCATA
TGGATCACGAGTGCTGCCTTATTAATCCCGAGCAGTGTTTCATTTAGTTA
CAATGAGGAAAAACAATTCTGTTTCCGTGAATGGGCGCCTGGCATTCACT
CCTTCACCTACTTTATGTTCACAGGACTCCTTGGTTTCTTTATACCGATA
TTCTCATTAACTTTTACGTACTGTACGTCAGTTTACACACTATGGTTTAA
AAGATCGAATGTCTCAAATACACGATTCAGTGGCTCGTCCCAGCCTCCTG
GTAATATGCGAGTCAAGAAACGAGTCAGTATCCTACTTGGTCTGTTAATA
GTAGTATATCTCCTATGTTGGATGCCTTTTGCTATCTACTGGCTACTATC
AGCTGGAATCGGGTATTACGACCAATCAGATGAAAAACTAATCGAGGGGA
TTCGATTTAATCGGATAACGGTATTCATCGCTTTATGTAATACAGTTTTG
AACCCGATTGTTTACGCGTTCACGAACGCTCATTTAAGAACTGCTTTTTG
GTATTGCTTACAATGTAAGAAGCTGAATGCGGTGGCCCAGAGGACTAGCA
TGACCGGTGGCCCAACTTTGGTATCTTACACGGCGGCAAGGAGGCATACT
ATACACCCAGGATCCGATATCGAACTGAGAACAATGGGTAGACCAAGAGA
GATGACCTTGTGAATGGGAGAAGAAAAAATGCTGCTACTACAAACCAAAA
GACTCACATCATTGGGTAAAAGAACGAAAATCTTGGACGCTCAAAGCAAC
CCACAAAAATCCGACAACGACAAAAAGATGTCGAATAATTCAACGGCAAC
AACTACCCAGTCGCCTTTCTTGGATGTCTTCACGCAACGAGAAATATATT
TAATGTACATTGGTTACGTCATCATAACCATATTCGGAATAAGTTCAAAC
TTAGCCGTTTGTTTCGTCATTCTCAAATACCGACATCTTCGGGTCATCGT
CAATATTCTCATATTAAATCTAGCGATATCTGACATAGTGGCATGTCTCA
GCGTTTACCCATTCATTTTTGTTGATATCCCAGCTACGGGGTTACGTGGT
AGATCGGCAAACGTGTTATGTGGTATTACGGAAGGTCTGAGCGTATTCTT
CGTAGTAGCGACAGTATCATTACTAACGTTGAGCGTTCTGTCAATCAGCC
GCTACATCGTTATCAATCATCCTCTCCGCTTGAATTGGAGGCTCAAGAAA
GGTAGCATTAAATATATTTTTACAATCATATGGATCACGAGTGCTGCCTT
ATTAATCCCGAGCAGTGTTTCATTTAGTTACAATGAGGAAAAACAATTCT
GTTTCCGTGAATGGGCGCCTGGCATTCACTCCTTCACCTACTTTATGTTC
ACAGGACTCCTTGGTTTCTTTATACCGATATTCTCATTAACTTTTACGTA
CTGTACGTCAGTTTACACACTATGGTTTAAAAGATCGAATGTCTCAAATA
CACGATTCAGTGGCTCGTCCCAGCCTCCTGGTAATATGCGAGTCAAGAAA
CGAGTCAGTATCCTACTTGGTCTGTTAATAGTAGTATATCTCCTATGTTG
GATGCCTTTTGCTATCTACTGGCTACTATCAGCTGGAATCGGGTATTACG
ACCAATCAGATGAAAAACTAATCGAGGGGATTCGATTTAATCGGATAACG
GTATTCATCGCTTTATGTAATACAGTTTTGAACCCGATTGTTTACGCGTT
CACGAACGCTCATTTAAGAACTGCTTTTTGGTATTGCTTACAATGTAAGA
AGCTGAATGCGGTGGCCCAGAGGACTAGCATGACCGGTGGCCCAACTTTG
GTATCTTACACGGCGGCAAGGAGGCATACTATACACCCAGGATCCGATAT
CGAACTGAGAACAATGGGTAGACCAAGAGAGATGACCTTGTGAATGGGAG
AAGAAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004098XLOC_004098Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007300-proteinTCONS_00007300-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007300-exon-sc0000075-1575043694:248511..248629TCONS_00007300-exon-sc0000075-1575043694:248511..248629Clytia hemisphaericaexon
TCONS_00007300-exon-sc0000075-1575043694:239814..241164TCONS_00007300-exon-sc0000075-1575043694:239814..241164Clytia hemisphaericaexon
TCONS_00007300-exon-sc0000075-1510915933:248511..248629TCONS_00007300-exon-sc0000075-1510915933:248511..248629Clytia hemisphaericaexon
TCONS_00007300-exon-sc0000075-1510915933:239814..241164TCONS_00007300-exon-sc0000075-1510915933:239814..241164Clytia hemisphaericaexon
TCONS_00007300-exon-sc0000075-1491911889:248511..248629TCONS_00007300-exon-sc0000075-1491911889:248511..248629Clytia hemisphaericaexon
TCONS_00007300-exon-sc0000075-1491911889:239814..241164TCONS_00007300-exon-sc0000075-1491911889:239814..241164Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:239814..248629 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.37089	1.72703	0	0.309253	0	0.398584	0.415494	0.326397	0.911314	0.502741	0	0	0	0.625925	0.592015	0	0	1.11788	1.15402	0	0	0	0.273417	0.336096
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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