XLOC_004098 (gene) - C. hemisphaerica

Overview
NameXLOC_004098
Unique NameXLOC_004098
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000075:239814..248762-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004098 ID=XLOC_004098|Name=XLOC_004098|organism=Clytia hemisphaerica|type=gene|length=8949bp|location=Sequence derived from alignment at sc0000075:239814..248762- (Clytia hemisphaerica)
CAGAAAGAGTTTGAACAAGATCGAACATATACAGAAATCTGAAAACAGAA
GCAATCTCACAATTATGGAGAAAATCTAAATGAAAGGTACCATTGAATTT
TTTATTGATTATTTTGACACATTAGTTTGTGTACTATGATAGAGGTTATA
TTAAAATAAAATTTATTTCAAGTTTATGTTTATGATACGTTTAAAAAATG
TTATTGACAATCGTGTAGGCGTTAAAATATAGTCGATGGGAGAAGAAAAA
ATGTATAGACATGTTTTGAGGTATAGACAGTTCCGAGTCTCGTGCCCAAA
ATAATCTTTCGCTCGTGATCGGAAATACTGCATGGCATGTATGTCTATAT
CTATATCTATTTTATTGGTTTTACTTAAACTACTACTTTGGCCAATGCGA
CTCAAATGAGAACTTTCTCGTGCACCCCTGTCTCAGTGACCCAGAGGAAC
TTTTTCCATCAGAGAGGATGAAAACGCCTACCTATCTAAATACCAATGGG
AAAAAAAATTTCCAGCCCAAAGACATAGGGATTTGGAATTTTCTAATTTC
AAAAATATATACTTTGACTAGGAAATATCATTAAAAATTTGCAATATTCA
ACAGAATGTAAAGTAGATTGACTGATTTTTCTGAAAAGAAATTTCTTACA
CAATGTAAAATTCCGGGGGTGACAAAGTGGTTTACTTTACATTCTGTTGA
ATATTGCAAATTTCAAATTATATTTCCTAGTAAAAGTATATATTTTTGAA
ATTGCCAAGCTTTAAACTTTCCAAAGATGTAAAAATAACGTTTATGCGAC
CTATCTATTAAAAGTTGAATTTTTTCGTCTTCATCTTTCTTCATGTTCTT
TTCAAATTTCACTGAAAAAACTAACATTAAATTAATAAGCTCCTTCCTAC
CTTCCCAATGATACCAAGCTTTTTAAGATTGAGAAATAACAAGCAAAGCA
AAATTTAGTGCACACTTATCGTGAATAGACTTAAGGTTGGGATCTAAACC
CAACCTCAATTAATGTAATACACACCTGAACCAAAAATACGGCATCGTTG
ATTTTCTTAGCATTCGGCCACTTTCATCATGAATATTCTTATTAAATACA
TTCTTTAAAATTAGTCATCTTTGACTTGCTACCCACAACGTCTCCTAAGG
TTGAGAGGGCGGTGTAACTGAATGCCAGGCACTTTACTATTTTTAGCATA
GCACCTCTTCACTTTTTGAATATTACTCTTAAGATTTCAATTTTCAAGTT
AATGAATCCTTATCATCAAGTCGAATAATCTGCGAACTTAACATGACAAG
ATGGATCACTCCTGTTGTTTTACAGACACAATGAAAATTACCCTATGTGT
AAAATATTGACATGTTATCGGATCTTTGAATTACTTTTCGCTTTAACATG
CTCAATGTAAACAGCCTCTCCTTTTTAGTAAGAATATTTATACGAAAGAT
TGCTGCTACTACCTTCAAATTTAGTTTCAGAACCTAATTAAGGGGGTAGT
CATATGAGAAATTTGAAATGTAATTTTTTAAACTTTTTGTTATATCTTCT
GAAGTAGTATATATTTTTCAATGAAACTTTCCACAATTGTAGCACAACTA
TAAAGGATTTGAAAAATTAAAAAAAAATTCTAAAAATAGCAAAGACGGGG
GTAATATCGTCCAGGGGGTAAAAGCTATAAAAATATTGTGTCAACCTTTT
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAATTGTAT
ACCAGGGCTCATAAGAAACCCAATATCTCGGCAGATATTTATGCTACGGC
CTTGAAATTTTCAGGGTATGTTCAGGAAGGATAAAGGATCCTAAATAACC
CTAAATCCCGAAATTGATAAATTTTTCACCAATTTTCAAAATCTCATATG
ACTACCCCCTTAAATCTAAATTGACTACAATGTACAAATAGGAGAATAGA
TCAGCAATTTCGAAGATAAATCCGCTTTGACTACTTTCTTATTTAACTGA
TGTGCAAGTTGGGTCTTGCAATCGTTTGAATTAAGTACAATTTTTTTAGT
TAGGTTTGACAACCTATGTATGACTTTAATGAAAGATGATACTTGTAAGC
TTGTTTTTCAATATCGTATGTAGATGAGCATAAGAGTTGTATTTGATTAA
AAATTTTCATTTAGAATCAGTCTGTTTGTCCACNAAGAGTTGTATTTGAT
TAAAAATTTTCATTTTAGAATCAGTCTGTTTGTCCATTATGTGAGAGAAA
ATTTCTTTATTATCAAATTTAATACTAGCAGGTCAATTTTCAACATCAAG
GTCAAATGAATTCCAATCATTTAAGACCTTACAATCTCTCCGATTTCCAA
TGGGTCAATTAGGTAAAATTGGGTACATTTTTAAAGTACACACCCCTACA
CATTGTGCTGGTTCTTTAGANGATTTCCAATGGGTCAATTAGGTAAAATT
GGGTACATTTTTAAAGTACACACCCCTACACATTGTGTTGGTTCTTTAGA
CGTGTCTATGTCAGTGATTTTTTAAGAGATAAAGCCCTTCCAATAAACGG
AAGAGGCCCTATCCAGGACAGAATTCGCTATCCTAGGATATGGAAATCAC
TGCGTATATCTGACCCTGCCAACCCGTGCTCGTGAGAGACAGAGAGAGCT
GATGGTGTACTATATAGTAACTATACTCGAATAACTCGGGAGGACAGTGC
ATCCTCGCATCCTACATACAAAGTATGGAATACCTCCTAACACTCTTGTA
TCAGAGCATGGTACCCAATATCCCCCTAACATGGCACTTATTGACCCGGG
AGGTACATTCACTTGCGAAGTGTGAGAATCAAACCCATACCATTGAGTTT
AAAGCCCCTTTTATCGCACATGTGTCAATCTAATCACTGTAGAAAGAATC
AAAGATGGAGAACAAATATTACCATATTAATGTCTAGAGCTGACTGTATC
AATATACATGTTTACTATTGACGAATTCCCCAAAAACCTCCAAGTGTAAT
CGGAGTGGGTTTCTTTCAAAAGAAATCTTCTACATGATTTATAAATGTAT
AACAGTAATTACTAAACTATTAATTATGGTAATGTTACTTCAATGGAATT
GAAATAATACACAAATTTTTATGTTATCATTCTCTATCACTGATTATTTT
TAAAAAGCGTTGATGACATTTTTGAGTTGTGTTTTCAACGACGCAAAAAG
AAATATGAACTTTGAACTTAATCCAAGGTCTTGGATTGTCGTCATGGTTA
CTTTTGTCTGCGTTGATTGTGCGCTGAATAGAATCCGGATTGGTCAGCAC
AGGTTGATCAAGGACACTTGTATAGCGTAGCAAGTGTCCTTGGGTTGATA
TATGATTTCGGCCTCTGCTTTTGACCGTACCTTTTTCAAGCAAGAAAAAG
TGAAGCCTTAAGATTTGCGCCGCATTTAGAATGACGGTTTAAATCTAGCA
CTTTCTTTGTTTTCACGCAGCATATTTTTCGAAATGTGGCGATATATTTT
ACTTTCAATCTAGCGTTGGTTTGAAAACCACGCGGGTCACGGAAGAGAAG
TAAGTGGCTTAATTTCCCATCCAGTAGTCTCGTGTCTAGCCCTCCGGACT
TGGAAGTCAATGACCCAGACCTCCTTCACGGAAGTCAAGATCATAATCAC
TACTGCGTTTTTCTTTAATTTGTTGATCAACTTATGTACCAAAACTTACT
TTCTTCTCAGTTACTTGTAGGGGCTTGATTAGTTGTTCTCAGGACCTTCT
GTCCCCTCCAAAGATTTTTTTGTTTCAAAGCTTGGCTCTCAAGGATGTGT
TCATCGTGGGCTCAGTTTAGAAAGATTGAATGACAACCTCGACGCCCCTT
TTGCAAAAAATATCGGCGCTTGCGGTTTAAGGCGTGAATGAATCATTTCC
AAAAGAGTAGCAAAAAGATACGATTTTTAGTCTCGACTTTGGCAATATAA
CGGAGACAGGAAGACACAAGAATGCTTTTAAATATAAAATGGAAAATGAT
GATATTTTCTTTTCAAAGGAGTATCAAATTTCCTTCGGATATATCCTTTT
CCACTTTAAAAAATCTTTTTGATGGCTTCAGTTCATTATCATTAGTCAAG
TGGCTTGTACGCACACTTTAATAAGTTGTGGAAGAATTTTATAGGTAAGG
TTGTGTAATGCAATATAACTAAACCTTGGCATAATTCTAAGACACCCCGC
CCTTGAGGGTTACTGCAATAAAGATATTTGATTGGAGAAACTTTAAAAAT
GCTTGTAAGGTCGCATTGTGATACAAAGTTCTCGTGATAACGGTCATCAG
GGAAACCTTGATTATTATTGGCTCCTAAACTATCTTTAAGGGATCTGACC
ATATTTGCCACTTTCAAAATATGAATATCTGCCAGATGTAGCGTACAAAA
CTTTGACATGTTATACATTTTCTGTTAGGCCAATTATCCGTGAGTCTGAA
AATTTAAAAATTGTAATGAAAAAATTTGATGAAGAAGAAAATGAAGACTT
TTGCGAAGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAA
AAAAAATTTGAAAATATTTTTGCGGTAGATGGTGTATCTTTTATCGAACT
AAAATCATCAAAATTTTTCTAAAAGCTTATTTGCTTCAAAATCTTGAAAA
TGGTGCTTTTTGACCAATTTTCTATTCCAATTTTTCATAGAAAAATAGCC
ATAACTTTTGATGTATTAGTTTAAAAAAATTTTCCTAAAAATTTAAAACA
GTTCAATTCTTTGCGGACAGTTTGAAAAAACTTTGAAACAAAAAGGTTAA
TTACCCATTAAAACTTTTTATAAAAGAAGGTGATAACATCATTTTTGCAA
TTAAGTTCTTAATTAGTCTTAAGGGATATGATTAAAAAGCAATTTATAAA
GGCAATTCTTTGTTAAAATTGTTAAAGAATCTAAAACGTAACTTTTATGT
TCAGATACTAAAAGTAATTTTCCGACTATGGTCAGAGCCCCTAAGGCAGA
TTATTTAACTACATTCATTGAAACCCCGGTGGGCTAGAGAGGAATGAATC
CCTCGATTTGGATGGGAAGTGAAGCCACTTATAACAGAGGCCACCCGAGC
GATTTTTGTGATGGCGTGATTGGGAGTTTTTTCTACTTTCGTGATTGTCT
ATCATAAGTCAAAACGTGATCGTAATTTGAAATATTTTTGAGCCGTGATT
TGGACTCTTTCAAAGGTGTGCGTGATTATCCAAATTTTTTGCTGATTTTC
GTGATCGTGATTGAATACAAAAAATTGCGTGATATCGTGATCTAACTTAC
TGCTGGGGGGCCTCATAAGACTCATCCGAAAATCATGGCCCTCGTGGTTT
TCGGACAAAAGAAAGTAGATCCCATGCTCCAAGTGAGCAAAATAAGAGTG
GCGGGACGGGATGAAAGCGGCACCCTATCGCCAATTTTTCCTTGCTCTCC
TACGCAGCTCTTATTTTATAAAACCCTAGTTTTTGCTAGTCTATCCCTAA
CGTGCTCTAGATTAATTTTTGAGCGGTAAATATTATGTTAAAAATGAAGT
ATTCTGTGAAAAATGGCAAGCAAAACAAGGATTAGTACACATTAAAGTGA
ATGGACTTTAAATACTACTACATATTTCTCAAATAGCAAAAAATACTCAA
AATAGGGCAGCATAGTTAAATTTTCGAAGTTGTATCTGATGAGATCGATT
TCTGATCATCTACAACACTGATGGGGTTTTTTATTTCATCGAACTTTTAT
CTGATAGGGATAGGGTAAATATTTGCTATAAATTGTTTGCTGGCCGGATC
CATTTTTTGAGCTCTCGCCGCGTGTGTAGCCTCTTTTTTGTTACACCTAC
GCCCTCCATCATACTGTGTTAACTTTTGTCCTCTTCCAAAATCACGAAAA
CTCGTGCACTCAGACACACAATGCATTGCACAAAAATGTTGTCAGAAAAA
ATATACAGCAACCCACAAAACCTAATTTCCGAAAGAAAGCTACAAATAAA
CAAAAAACAATCCTCTTTGCCTTTCCAACCTCCTTTTTATAGTCTCTCAC
TAAAATCTTAAAGGAAATCCTGGCAGACGAGCTATCGTCATTGAACAAGC
AACGCAAGTTTTTCATCCCGGAAAATATCGGGTTTAATTACAGTCTTTGT
TCTTTGTTAGTTGACAGAGGATAGCTTCTTTATCTTCATTCTAACTTTTT
GAAATATCAGTCTGTTTAATACAAAACCAACCAACAACGACCCTTCATAG
GGCTCTTCTTTACCCTCACACCGTCATAGTTAGCGTTTATTTGACCTTAC
AAAGACGTCATTGACGCTAGCAGAATATCTTCTTGACATTTTTTTCATAG
CTGAAGTTGTACTTTTGAATTGAAATATTGTTTTCTCTTTTATGTTAGGC
TGCTACTACAAACCAAAAGACTCACATCATTGGGTAAAAGAACGAAAATC
TTGGACGCTCAAAGCAACCCACAAAAATCCGACAACGACAAAAAGATGTC
GAATAATTCAACGGCAACAACTACCCAGTCGCCTTTCTTGGATGTCTTCA
CGCAACGAGAAATATATTTAATGTACATTGGTTACGTCATCATAACCATA
TTCGGAATAAGTTCAAACTTAGCCGTTTGTTTCGTCATTCTCAAATACCG
ACATCTTCGGGTCATCGTCAATATTCTCATATTAAATCTAGCGATATCTG
ACATAGTGGCATGTCTCAGCGTTTACCCATTCATTTTTGTTGATATCCCA
GCTACGGGGTTACGTGGTAGATCGGCAAACGTGTTATGTGGTATTACGGA
AGGTCTGAGCGTATTCTTCGTAGTAGCGACAGTATCATTACTAACGTTGA
GCGTTCTGTCAATCAGCCGCTACATCGTTATCAATCATCCTCTCCGCTTG
AATTGGAGGCTCAAGAAAGGTAGCATTAAATATATTTTTACAATCATATG
GATCACGAGTGCTGCCTTATTAATCCCGAGCAGTGTTTCATTTAGTTACA
ATGAGGAAAAACAATTCTGTTTCCGTGAATGGGCGCCTGGCATTCACTCC
TTCACCTACTTTATGTTCACAGGACTCCTTGGTTTCTTTATACCGATATT
CTCATTAACTTTTACGTACTGTACGTCAGTTTACACACTATGGTTTAAAA
GATCGAATGTCTCAAATACACGATTCAGTGGCTCGTCCCAGCCTCCTGGT
AATATGCGAGTCAAGAAACGAGTCAGTATCCTACTTGGTCTGTTAATAGT
AGTATATCTCCTATGTTGGATGCCTTTTGCTATCTACTGGCTACTATCAG
CTGGAATCGGGTATTACGACCAATCAGATGAAAAACTAATCGAGGGGATT
CGATTTAATCGGATAACGGTATTCATCGCTTTATGTAATACAGTTTTGAA
CCCGATTGTTTACGCGTTCACGAACGCTCATTTAAGAACTGCTTTTTGGT
ATTGCTTACAATGTAAGAAGCTGAATGCGGTGGCCCAGAGGACTAGCATG
ACCGGTGGCCCAACTTTGGTATCTTACACGGCGGCAAGGAGGCATACTAT
ACACCCAGGATCCGATATCGAACTGAGAACAATGGGTAGACCAAGAGAGA
TGACCTTGTGATGAAACAATAAACACACGATTACAAACAAACAAATAAGA
TACATTTTTTCAATCCGTTTTCTAAGTGTGTTAACATTCTTGAAAAACGA
CATTAAATTATTTTTGATTATTTTTGTATAGTTTGTATACAGTGTGTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007301TCONS_00007301Clytia hemisphaericatranscript
TCONS_00007300TCONS_00007300Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007300-proteinTCONS_00007300-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:239814..248762 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.23	0	0.03	0.12	0.03	1.49	1.73	1.44	1.59	1.64	1.3	3.85	3.88	2.73	4.58	2.04	1.98	1.32	0.63	1.97	2.25	1.09	1.23	1.43	1.44	0.12	0.13	1.69	1.27