TCONS_00006952 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006952
Unique NameTCONS_00006952
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1483

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006952 ID=TCONS_00006952|Name=TCONS_00006952|organism=Clytia hemisphaerica|type=transcript|length=1483bp
GTCTGCTGTTGGGTCAAGATCAATCCTTCTTTGTGCCCATCATTGTCTGA
CACGTTGATTGGAGTAACTTAATATCATAAAGtaccttataaaaaaataa
tattaacaATACAAAATGGTTGAATCTGGTGTCAAACTGAACCTCGATTG
CGTCGAAGCTTTCACCAATGTCCACAAAGCACAAACAAGCCGATTCTGCG
TGTTTGGATTTAACGATAAACGAACCAAAGTCGAGTTGAAGTACGCTgca
ggaaaagaagaaaattttgaacagCTATTGGCACAGCTCCCAAAAGATCA
TGTTCGCTTTATCTTCTACGACTGCCAATACAAAACGAAGGAAGGACAGG
ATCggaataagGTACTTTATGCTGTTTGGTCTAGTGACGACGATGCAcca
ggaaaagaaaaaatgttgcTCTCTTCAACCTCCAAAGAGGTGGAGAAAAA
ATGCAACGGATTCGCCAAGAAGGCTTCATACCACGAATGGGCAGAACTTA
CCGAAGCCGCCTTCGTTGATGTCGTTTCCGAGGGtggacaaaaataaaca
cgCCTCGACGCCCTTCCTTCTCTCCATTGGTTTACGTcgcgaaaataatt
aaatttgcTGTCCGTTCATTATATCTTAAAGATGGAGGTccacttttttt
gttttaggtTTTTTGTATAAGTCAGATAATTAATTGGAAACGAACTTATG
TTGTCGGTTGGTGGACAAACCTTTGAATATAATATAATGGAttgttaaat
gtttttttataacgAGGCCTTTTGATTTAAAACCAAGGTTTCCCGAATAA
GGGTTGATCTTTGCCATCAATCGTTATCAAACAAATCTAGTAAAAATCGA
TATGTTACATAactgttttttttctaaaaatttcccCACTGTGATTCATC
GTGGTTTGATTTTGCAATGATACTCTTTATAAGGCAACTTTGGATTGAAA
CGACAGATCATTTCAAACTTTTCCTCTATTATGTTCAAATTGATAACAAT
GATATAATTTATTTTATCTATacgaaatattaaaaatcttttgaaaacaa
taaatatacCAAAATTTGTTCCATTTTTAAATCCAGTCGGTACCTCTGAT
TGTTTGTCGAAAATCGTGGCTTTCCCCTTAACAACACGCTCATTGCGTGA
ATCCttttaaaaatggaaaatattacttggaatttcaaaatattgaaggT
TTCACATTCAATCTAGAAACGCAGCattttatgtagatttcaaatATACA
CAATGAAAGCAAATTTTTCTGTTATATTTGATCCCTCTAATACGTATTTG
TTTGGTGATCCGCAGTGAACGTGATGACCAAGACTTCGTGAATTTCTTTT
ATGAGCTCTCATGGGTTTTAGAGAAGATGTGAACATAGAGTGGTGAGatg
ttaagaacatctcaaGGGCTTCAAAAAATTGGGGTTCCGAAAGCTAATTC
TTGGTCATTTTTTCATACTCGGCCCGAGCTTAG
Run BLAST on NCBI

protein sequence of TCONS_00006952-protein

>TCONS_00006952-protein ID=TCONS_00006952-protein|Name=TCONS_00006952-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
MVESGVKLNLDCVEAFTNVHKAQTSRFCVFGFNDKRTKVELKYAAGKEEN
FEQLLAQLPKDHVRFIFYDCQYKTKEGQDRNKVLYAVWSSDDDAPGKEKM
LLSSTSKEVEKKCNGFAKKASYHEWAELTEAAFVDVVSEGGQK
Run BLAST on NCBI

transcript from alignment at sc0000072:486625..495661-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006952 ID=TCONS_00006952|Name=TCONS_00006952|organism=Clytia hemisphaerica|type=transcript|length=9037bp|location=Sequence derived from alignment at sc0000072:486625..495661- (Clytia hemisphaerica)
GTCTGCTGTTGGGTCAAGATCAATCCTTCTTTGTGCCCATCATTGTCTGA
CACGTTGATTGGAGTAGTAAGAAATTTTTAATCTTTTATTTTAGTAAGAA
CTTTGTTTTATGATTGCTGAATGATTCTAAATTTAACTTTCAAAGAACGG
TTGGTAAAGTTTGCTTTTTTGATGATGCATGGACTGATCATTTTTTTGAC
TACGAAGCTTTCAAAAACGTTTCNGCTCAAAAAACCAACTTTCCCTAAGG
GAACGCAGGCAAAAACGGGTTTGTTTACCTCCAGAGACCAAACGGTGGAG
AGCATCGAAATAATGCGCGCGCATTAGTTTTACGAATTACGGGAAAGGTG
TATTTCTACCGAAATAAACGATTTTAAGTGTCTGGAACAAAATGTCCGAT
CAGATTGCTTTAGCTTAAAATTATGATTTTTTGGGTCGGACATGAAGCTA
TTTGGGTCAGACAATACCCCATGTTCAGCCGTTATTTCAAGCCCTGTGAA
AATTTTGAGCCTTTAAATTTTTGATACTGTAATGAGTCACAATTTACTTT
TGAAATACTGGATTCCGTAATATTTTGAAATAAAAAGCCAAGATTCACAG
AATTATTTGCTTTTTGGGATATTTCGAAGAATAAAGTACCTTTTAAGGGT
GTCACATCCAATGCTTCTGGTTCCCCAATTGATATCTTCCGTTGGCTTAC
TTACTTGCAGGTTACTTGAAATTGATTTTTTCAATATGGAGACCAGTGTT
GTTGTAAGGGATCCATGACTGCCATCTGTTTGATTCAGCTTGCCTCAAGC
CAGTGTTTCTATTTCTATCCATTTATTTGCATAAGCCTAAAAAAGCTAAC
ATCGCAAATAACCTGAAACGAGGGGTTCATCAGGGACAGTACACAGGAAT
TTATTAAGTTGACGTTTTAAGGCATCCTTGGTGCAGTCCTTAACAAACTA
AGCTAAGGTAAACCCAATTTTATCAGGCTATACAGGGGGTCATTACTAAA
AAAAGTCTTAGACATAATCAATGGTCAAAGGCTTTTGACTTTAATTACAT
ACCACAAATCCATTTAGAGAAGTGGTATATTTAATTTTAGTGCAAATCTA
TTTGAACATTTGGGGACATTATGACATAGAGACCACCCTATCTTTGATTC
CTTTGGACAAATTTTGTAATTTGTAACTTGATTATTCTCATACTGTACCT
ACCTACNGAAAGTGATTTTTACTGGAGGATCAATTTGAAAATGCAAACCT
CCGCATTTATTTCCGTCTTTTTTGCGCAAAATGCACTTTTCTCACTCTAG
CGCTGTCGCGGCTTTATTTTTATTTGATTGCTTCGCAATGTAAATCAAAC
TTTATTTACGTCACAATTAATATTTTCCATATTTGGTAAAAAATATCAAT
CCGCATTTTAACTATTGTACTTTAAATCTCCTACGTAGTTGATTTTACCG
CCCTTTTGCTACAAGGTCGAAACCTAAAATTGCATTGTGGGGGAGTGCCA
TAGACTGTGTATTTAACTCTGGGAGCGGTATGTGGGGTTCTGAACTTTTC
AAAGCTGCAACATCTTTCTTGGGCTGTCTGCTGTTTGGTCAAGATCAATC
CTTCTTTGTGCCCATCATTGTCTGACACCACACGTTGATTGGAGTAGTAA
GAAATTTTTAATCTTTTATTTTAGTAAGAACTTTGTTTTATGATTGCTGA
ATGATTCTAATTTTTAACTTTCAAAGAACGGTTGGTAAAGTTTGCTTTTT
TGATGATGCATGGACTGATCATTTTTTTGACTACGAAGCTTTCAAAAACG
TTTAGACAAAATGATGACCAATAATTTGAAAGTGTTAAGGAAAAGGATTT
ATTTTATTTTGTATGACACATCTTGCTTGATACCTAGTTCTCAAAAAATC
ATATGGAGAAAGTCAAGTCCAGTGAAATGAAATAACACAAAGCTTTAACT
TAGGGGAAGCATCAATCTTGCCACACCATGATCTCTGTCTATATCTATCC
TCAATCAGACTTTGTTAGTGTAGGTATATCAAAATGTAGAGTTATGCTGT
TGGCATTATGGTTTGAAGAGCAAGTTCCTAGGGAAAAAATAGCTTATCGG
TTGAAATTTTATTGGTAGNTTTCGAAGAATAAAGTACCTTTTAAGGGTGT
CACATCCAATGCTTCTGGTTCCCCAATTGATATCTTCCGTTGGCTTACTT
ACTTGCAGGTTACTTGAAATTGATTTTTTCAATATGGAGACCAGTGTTGT
TGTAAGGGATCCATGACTGCCATCTGTTTGATTCAGCTTGCCTCAAGCCA
GTGTTTCTATTTCTATCCATTTATTTGCATAAGCCTAAAAAAGCTAACAT
CGCAAATAACCTGAAACGAGGGGTTCATCAGGGACAGTACACAGGAATTT
ATTAAGTTGACGTTTTAAGGCATCCTTGGTGCAGTCCTTAACAAACTAAG
CTAAGGTAAACCCAATTTTATCAGGCTATACAGGGGGTCATTACTAAAAA
AAGTCTTAGACATAATCAATGGTCAAAGGCTTTTGACTTTAATTACATAC
CACAAATCCATTTAGAGAAGTGGTATATTTAATTTTAGTGCAAATCTATT
TGAACATTTGGGGACATTATGACATAGAGACCACCCTATCTTTGATTCCT
TTGGACAAATTTTGTAATTTGTAACTTGATTATTCTCATACTGTACCTAC
CTACCTCTTTGTACCTTTTACTGGCTTTTGCTTGAACAGCTCATCCAACT
CGTTGAGTCCGATGCTTCGACATTTCCTTGAGGCTGTTGGAGTCAGCTTG
CCTAAGGGTGAAACAGAGGTGCCAACTCTCACGTATTGGACGCTCACGCA
TTGGACGTGAGACTCGCGCATTCCAACACTGTCTCACGCAATTTTTCAAG
TTTGATTTCTCACGCATTTTTGACATTTGAAAAAAATTTCCTTGTTTTTC
CAATTATTTTGAAAAAAGTTTCCCAGATTTTGTGATTTTCCGAAAAAACT
TTTCCCCGATTTTTTGGTTTTCGGGAAAAAAGTTTCCCAATTTTTCCTAG
ATTTCCTATCTTTTGGAAAAATTATCCAAGATTTCCATCTTTTGGAAAAA
AATTTCCGGTTTCCGAAATCAGAAAATCAGAAAAGTCGGACTAAGATTTC
GGATTTTGCTTCGAAATTTTCATCTCACGCAAAAAAAACATCTCAAGTTG
GCAGGTCTGGTGAAATAGTGGGCAAGCAGTGGTTCGTCTGGAACAGGTTG
TGAGGAAGGTGTCTAAGTGTTTTTTGAATACTTCTTTGGGCAGTTTGTCT
TAATCTCTTATTGGTCTGGGAAGGGTGTTGAACAAACGAGGGCCCTCTTA
GGAAAGACTCCCCTCCCAGATATTTTTGTGTTTGATATTGACAGCTTTTA
GATTGCAAATTCTCCCCAATCTTTGACTTCTGTGGCAGGAAATGCCTCCT
TTTCTTTCGTCATAATTAAAATTTGGGACGTTGCCTTCAATGACGTTTGA
GGTATAAATTATTTGATAGCGCTCTGTCTTTCAAGGCTATACTTAAGTTT
ACTGATTTTAGTTTTTCCCAATATAAGATGTCTGAGGGATGGAATTCCAT
GTAAAAAGGATTTCTGAACTTCTTCCAGTTGCTGCACAAAACCACATTTC
CAGGGTGACCAGAGTTGAGAACAGTAGTCCAAATGAGGGATGGCTAGTGC
TTTCCATAGAGTTAACATGGTTAAATTTTCCTTGATTTGAATGTGCGGTA
TATCCATACCATGCACTTATATTTTTTACCAGTTTTTACTTTTTTAATTT
GTTCTTGGATATGATAAGTCAACTGAGTGTCTAGGGTGACTCAAAGGTCT
TTAACTTTTTCCTTACTGTATTTTCGATCAACGTTGCTGTGTCAAAAAAA
TAGCGAGAACTTTGCTTCAGTGTGTCGTTTTTCCCGTAGGCAAGGTGCAT
AAAAAAAACTGTATGATGTAATTGATTTAAAAAAGTGCCATTTTAACCTC
AGTTTTCAATATCAATGTTTTTGCCGCTTAAAGTTGCACGTTACTAATTT
GTGCATAGCTTGAAAGGGCCATTTAAATTGGAAGATTTTAAATGAAATAC
ATAATGCCACTTTAAATCTGGCGTTTATTAATGATTAACATCATTAATTT
CAATTTTGTCCAACTTCCTCATACATTTCTTTTTTAGAAAACTTTAAACA
GAATTGCAATTTCATATTAAAAAGATAATTCCTTGAAAAGCCTCAAATAG
TAAACACCAGTGACTTAGACAACGCTAACAGTGAAGGACTATTTTCTCAA
TGGGGAGGGTTCATATCATAATTGTACATGCATAATTGAAAAAAATCTTG
TATGTAGGTTGTCTTTTTCTAAGATGGGACTAGCGTTTTGAACCATTTGA
TGCTTGAGATTAGCTGCAACATTTCTTATTGAAGCTTTCAATTGATTAAG
GGTCTGGGGTTGCTCCAAGATCTGTTATCTTATGCAACCCCACAAAAAGA
AATCACATACAGTGAGATCTTGGAAACTAACCTCAAGGTAAGGAAGAGAC
ACATTGCATTGCTGGTGTGGAGAGTTAGTAAATTAATAGAAGAATTGCTT
TCTTCATAATGATTCAATACCCTCGTTTTTTGCCTTTTTTAGCATTTTCA
AAAATTAATGATTTAGCATCTATGCCATAACTTTTGATCTACTTGACCTA
ATTTGACAAATGACTCCTTCAAATTTAAGTTTATCCATCCTCTTTCTAAT
ACAAAAGGATTGATTCCTTAATGCTTCATAGGATTTTAGAAAATTCAATT
CAAAGAGGGGACTTTTTTCTGGGACACCTGGTATTATCAGAATAACCAAC
TTTCAACAGTGTCTATCAAGTTTAACATTGTAAACTTCTTCATTTGAATT
TTACAGTGGGCTTAATTTTTGAGTTTCTTTTTCTAATGTAATGCCAAGTT
TGGAAAAGTAGATACCCTGAAGTGTCTGAAAATGGTATAGTATAACTTTT
TTCCACTTTAATTTTTTTGCTCAATAGTGCCTATGTTTGTCTGGAACATT
TAAAATGGATCCTTGGGATGTTTGCCTGATTAAACTGGATGAAATTAGAT
GATTTTTTTTCTTCTCAGCTAAAAAAGTCATGGAATTTGAAAAACGTTTT
ATTGACATCATGCCTAGGATGTAGGAACACAAATTTGTGGTTTTCAATAG
TATTTTCTTGCACGTGATTGACAAGTGTGAACACAAAAACCCTGAGTTAT
GAAGTAACTCAATAGGTCGATCATAAAATATAGTTAAAAATTATTCTTCC
AGAGGAATTTCTAATTTTTATGCAAGTCCTATTTTTTTATGTATTGATGA
TTCTCAAAGAGTTATAAAGTGTTCTGTTGGGGAGTGGTCAGAAAGTATCT
ACTAGGGTAGGGTGGGGATATTTTTTTAAAATTCCGAAATAAATTTTCAC
TCCCCCGCATAATAAGCCCCTAACCAGTCAATGTATTTTTGGTACCCCCC
TCCTATACTTCCTTTCTTGTCAACAAAGCTAAAATTTAATGTGAATAACC
TTGAGCATACCATAGGCTCTTTTTTTAAGGTATATAATATAATTGTGTGT
ATACAAGGTTGAGGCATGTAGTAAGCAAATTTTTACATGTCAGGCTTCTG
CTCAAACCACCTTAATAGTAAAACTTGGCAAGGAGGATCCTCTCTGTTTG
CTTGAAATGGGTTTTTGATATGTACTTGAAATTATATTCCATAGTGCGCT
AAAAAGGTTGTATGTGATGGTTTTTACTGTCAGCCTTTTTGACAAATTTG
TTGATTTTGTAATAGATAAACGTTTGTTTTTTTATAAGAACATCCAAAAT
TTTTGAAGCCTTCAAATTTTCTTAACGTTCGAGTTTTAAGCCTAAAAATG
TTCTTAACATGTTCTTATTTTCGCAATTTTTTGATTATTTTGTCCATTTT
CCTAAAAAATAAGGTGAATTAGCGTCCACCAAGCCTTAAAATGTTTTTAC
TTAACTTGTTCATAATATTTTGGCCATCAAAGCCTTATGTTCTTATATAT
AGTTTGTTCTTATAAAAAACGTGTATGTATAAATGTCACTTATAAATCTC
AGTTGTACTAAATGCAACGAATAGAACTGTTTTAAATGACGATATAATTT
TCTTGTTTTATCAATGACAACAAATAAATCAGGTAATTTTGATAGGATTA
CAAACCCTTAGCAACAATGTGTGGTTTGCCTTAATGTTGTTTTGATAAAC
TTAACTCTCTTCTCTCTCTCTCCTTTCATGTCATTGATCATTGCATTTTA
TGATACACGTCATGTCATGTGTGTGTGTTGTCATTCCTTTTGCATTTTGT
TTTTCTAACTTCTGGATTTACTTTAGTCCTACTAGGATTGTTAACTTATC
AAAATGTATTTTATCTATACTTCATCCTGTAGTGTGTGGTTTGCTGAAGT
TGTTACCGTATGCTCTCAAAAAATCTCATCTACGTCTTAAAAACATGCCT
ATCCGGACGTGTTTTTTTTACATAAACGTTTGATGACGTTTGAATGAGCC
CATAATAAATGCAGTCAAGGATCAAAGATTTTGTTTGCGTTACTAGAAAT
TGATTATTCTCTTTTCAGACTTAATATCATAAAGTACCTTATAAAAAAAT
AATATTAACAATACAAAATGGTTGAATCTGGTGTCAAACTGAACCTCGAT
TGCGTCGAAGCTTTCACCAATGTGAGTAACTTTTTTTCTGCATTTTAATT
ATCCATATTTTTATTACCTTCATGGTTTATTTAAGTCATTTTGAATACAC
GTTTTCGACCGTAGTCGCACGGGCATTTTTTGGCATTTCACTGAAACTGT
CCCAATCCTTTTTTGACGCATCTTTCTATTGTCTATAGGTGCGAAAAAAG
GGCTGGGACGATTTTAGTGGGAAAAAAATGCCCGCGGGACTACGGTCGAA
ACGGTGTATTGTATGAACGTAAATAACGGTGAAACAAAACGAGGCAGAAT
TTGCCTTTAAATTAAAGTAACTTTTTGAAATAACCAACTTGACAATTCGC
TAAATTTGAGGCAGACCTTTGATGGTTACATTACCAACCTCATCTTTAAA
ACTTTATTTCATTCCAAAGGTCCACAAAGCACAAACAAGCCGATTCTGCG
TGTTTGGATTTAACGATAAACGAACCAAAGTCGAGTTGAAGTACGCTGCA
GGAAAAGAAGAAAATTTTGAACAGCTATTGGCACAGCTCCCAAAAGATCA
TGTTCGCTTTATCTTCTACGACTGCCAATACAAAACGAAGGAAGGACAGG
ATCGGAATAAGGTAAAAATAGAGTTTCGGATTCAACTTATGACACAGTCT
CTCAACTTTGACATACTATATTTTTCAAGCCATAAAAAGGAGTGACAAAA
GTGATTCAAAAGTATACACGCAGTTGAAATTTTGCATTTCAGCGTTGAAA
AATGTTGATAAAATATATTGCAAACTTGTGAAAAATCTTCGAGAATAATT
CTTTTGTGAATTACAAGTATGTTCAAGCTCTAATAAAATACATAAAAAGT
ACATAAAAATACTTTTAAATGACCAAACTTTTCTTTTTGAATTGATAAAT
TTTTCAAACAAATCAATTTTATACTCTAGTCAAGTGGAAAAAAAGCGAAG
GCTCTCAGGCCGGTTAGGTCGAAGTTTTTTATCACTCCTGGAAATGGGTT
GTAAATATTTATCGGTGTCTACAGGGAGTGGTTCTTTTATGAGTCCAAAC
TGATGTTTTGTGTCCGATTCGGATAAAAATTGCAAATTTTAGAAAGTGTA
AAATCAATATCATTGAAATAAGTTTCAGCCTAGGGTAAAGAATCTAAAAT
CACAGTCCATGGTGAATATTTGTGTTTTGCAATGACTCAACCTTTTTCTA
TTGTCTTTTATACAGGTACTTTATGCTGTTTGGTCTAGTGACGACGATGC
ACCAGGAAAAGAAAAAATGTTGCTCTCTTCAACCTCCAAAGAGGTGGAGA
AAAAATGCAACGGATTCGCCAAGAAGGCTTCATACCACGAATGGGCAGAA
CTTACCGAAGCCGCCTTCGTTGATGTCGTTTCCGAGGGTGGACAAAAATA
AACACGCCTCGACGCCCTTCCTTCTCTCCATTGGTTTACGTCGCGAAAAT
AATTAAATTTGCTGTCCGTTCATTATATCTTAAAGATGGAGGTCCACTTT
TTTTGTTTTAGGTTTTTTGTATAAGTCAGATAATTAATTGGAAACGAACT
TATGTTGTCGGTTGGTGGACAAACCTTTGAATATAATATAATGGATTGTT
AAATGTTTTTTTATAACGAGGCCTTTTGATTTAAAACCAAGGTTTCCCGA
ATAAGGGTTGATCTTTGCCATCAATCGTTATCAAACAAATCTAGTAAAAA
TCGATATGTTACATAACTGTTTTTTTTCTAAAAATTTCCCCACTGTGATT
CATCGTGGTTTGATTTTGCAATGATACTCTTTATAAGGCAACTTTGGATT
GAAACGACAGATCATTTCAAACTTTTCCTCTATTATGTTCAAATTGATAA
CAATGATATAATTTATTTTATCTATACGAAATATTAAAAATCTTTTGAAA
ACAATAAATATACCAAAATTTGTTCCATTTTTAAATCCAGTCGGTACCTC
TGATTGTTTGTCGAAAATCGTGGCTTTCCCCTTAACAACACGCTCATTGC
GTGAATCCTTTTAAAAATGGAAAATATTACTTGGAATTTCAAAATATTGA
AGGTTTCACATTCAATCTAGAAACGCAGCATTTTATGTAGATTTCAAATA
TACACAATGAAAGCAAATTTTTCTGTTATATTTGATCCCTCTAATACGTA
TTTGTTTGGTGATCCGCAGTGAACGTGATGACCAAGACTTCGTGAATTTC
TTTTATGAGCTCTCATGGGTTTTAGAGAAGATGTGAACATAGAGTGGTGA
GATGTTAAGAACATCTCAAGGGCTTCAAAAAATTGGGGTTCCGAAAGCTA
ATTCTTGGTCATTTTTTCATACTCGGCCCGAGCTTAG

Coding sequence (CDS) from alignment at sc0000072:486625..495661-

>TCONS_00006952 ID=TCONS_00006952|Name=TCONS_00006952|organism=Clytia hemisphaerica|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000072:486625..495661- (Clytia hemisphaerica)
GTACTTTATGCTGTTTGGTCTAGTGACGACGATGCACCAGGAAAAGAAAA
AATGTTGCTCTCTTCAACCTCCAAAGAGGTGGAGAAAAAATGCAACGGAT
TCGCCAAGAAGGCTTCATACCACGAATGGGCAGAACTTACCGAAGCCGCC
TTCGTTGATGTCGTTTCCGAGGGTGGACAAAAATAAGTCCACAAAGCACA
AACAAGCCGATTCTGCGTGTTTGGATTTAACGATAAACGAACCAAAGTCG
AGTTGAAGTACGCTGCAGGAAAAGAAGAAAATTTTGAACAGCTATTGGCA
CAGCTCCCAAAAGATCATGTTCGCTTTATCTTCTACGACTGCCAATACAA
AACGAAGGAAGGACAGGATCGGAATAAGATGGTTGAATCTGGTGTCAAAC
TGAACCTCGATTGCGTCGAAGCTTTCACCAATGTACTTTATGCTGTTTGG
TCTAGTGACGACGATGCACCAGGAAAAGAAAAAATGTTGCTCTCTTCAAC
CTCCAAAGAGGTGGAGAAAAAATGCAACGGATTCGCCAAGAAGGCTTCAT
ACCACGAATGGGCAGAACTTACCGAAGCCGCCTTCGTTGATGTCGTTTCC
GAGGGTGGACAAAAATAAGTCCACAAAGCACAAACAAGCCGATTCTGCGT
GTTTGGATTTAACGATAAACGAACCAAAGTCGAGTTGAAGTACGCTGCAG
GAAAAGAAGAAAATTTTGAACAGCTATTGGCACAGCTCCCAAAAGATCAT
GTTCGCTTTATCTTCTACGACTGCCAATACAAAACGAAGGAAGGACAGGA
TCGGAATAAGATGGTTGAATCTGGTGTCAAACTGAACCTCGATTGCGTCG
AAGCTTTCACCAATGTACTTTATGCTGTTTGGTCTAGTGACGACGATGCA
CCAGGAAAAGAAAAAATGTTGCTCTCTTCAACCTCCAAAGAGGTGGAGAA
AAAATGCAACGGATTCGCCAAGAAGGCTTCATACCACGAATGGGCAGAAC
TTACCGAAGCCGCCTTCGTTGATGTCGTTTCCGAGGGTGGACAAAAATAA
GTCCACAAAGCACAAACAAGCCGATTCTGCGTGTTTGGATTTAACGATAA
ACGAACCAAAGTCGAGTTGAAGTACGCTGCAGGAAAAGAAGAAAATTTTG
AACAGCTATTGGCACAGCTCCCAAAAGATCATGTTCGCTTTATCTTCTAC
GACTGCCAATACAAAACGAAGGAAGGACAGGATCGGAATAAGATGGTTGA
ATCTGGTGTCAAACTGAACCTCGATTGCGTCGAAGCTTTCACCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003885XLOC_003885Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006952-proteinTCONS_00006952-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006952-exon-sc0000072-1575043694:495596..495661TCONS_00006952-exon-sc0000072-1575043694:495596..495661Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1575043694:488941..489043TCONS_00006952-exon-sc0000072-1575043694:488941..489043Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1575043694:488351..488542TCONS_00006952-exon-sc0000072-1575043694:488351..488542Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1575043694:486625..487746TCONS_00006952-exon-sc0000072-1575043694:486625..487746Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1510915933:495596..495661TCONS_00006952-exon-sc0000072-1510915933:495596..495661Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1510915933:488941..489043TCONS_00006952-exon-sc0000072-1510915933:488941..489043Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1510915933:488351..488542TCONS_00006952-exon-sc0000072-1510915933:488351..488542Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1510915933:486625..487746TCONS_00006952-exon-sc0000072-1510915933:486625..487746Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1491911889:495596..495661TCONS_00006952-exon-sc0000072-1491911889:495596..495661Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1491911889:488941..489043TCONS_00006952-exon-sc0000072-1491911889:488941..489043Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1491911889:488351..488542TCONS_00006952-exon-sc0000072-1491911889:488351..488542Clytia hemisphaericaexon
TCONS_00006952-exon-sc0000072-1491911889:486625..487746TCONS_00006952-exon-sc0000072-1491911889:486625..487746Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:486625..495661 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
991.928	1031.99	1094.16	1194.96	730.719	543.21	927.957	945.003	1275.39	1024.76	1079.11	1358.43	1609.16	1738.15	1324.21	1195.33	1220.18	1347.87	1621.39	1428.94	1625.7	1561.34	1086.22	1167.63	867.906	916.117	1435.99	1757.67	1466.41	1519.17
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006952 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top