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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006378 ID=TCONS_00006378|Name=TCONS_00006378|organism=Clytia hemisphaerica|type=transcript|length=2437bp
atatGGCAGACTTGAACAAAACCGAAAGTACGAGAATATTCTGGGTCGCA
GCAAGATTTCAACCAGAAACACAGCGAATTCGATGATTCTGGAATTTTTC
CAAACAATATATAAAGAGAGTAAATCTGAGAAATGTCATATTCAAACAAG
AGTTAAAAGTTGACAACAACGAGAAAAATAAAGACTTTAGAATTCACGAG
AAGAAAAACATCACAAAAATGGGAAAAGCAGTAGGAATCGATCTTGGAAC
AACTTATTCATGTGTTGGGATCTTTCAAAATGGAAAAGTTGATATCATCG
CGAATGATGCTGGCAACAGAACAACGCCAAGTTATGTTGCGTTCAATGAC
GTTGAGCGTCTCATTGGTGATGCAGCAAAAAACCAAGCTGCTATGAATCC
TACGAACACCATTTTCGACGCAAAACGATTGATCGGTAGAAATTTTGTGG
ATCAAACAGTCCAATCGGATATAAAGTTATGGCCATTTAAAGTTGTAAAC
AAAGCTGGAAAACCAAAGATTGAGGTCGATTTCAAAGGGGAACGAAAGAT
TTATACTCCAGAAGAAATATCATCAATGgttttatcaaaaatgaaagata
CTGCTGAAAATTATCTGGGAGAGAAAGTTACAGATGCAGTCATTACAGTC
CCAGCATATTTCAACGACAGCCAACGACAAGCCACAAAAGACGCAGGTGT
GATTGCTGGTTTGAACGTCTTGCGTGTTGTTAATGAACCAACAGCAGCAG
CAATTGCTTACGGCCTTGACAAGTTCACTGATGAcgaaagaaatgttttg
attttcgatCTTGGAGGTGGCACCTTTGATGTCTCAGTACTGGCAATTGA
TAATGGAGTCTTTGAAGTGAAATCAACCCGTGGCGACACGCACCTTGGTG
GCGAAGACTTTGACAACAGAATGGTGGAACATTTCGTAGCCGAGATCAAA
CGAAAACACAAGAAAGATATCACATCCAACAAACGAGCTATCAGACGTTT
AAGAACAGCTTGCGAAAAAGCCAAACGAACTCTCTCTTCGACAGCTCAAG
CTTCTATCGAGATCGATTCCCTTTTCGACGGAGTTGATTTCTTCACATCT
ATCTCCAGAGCAAGGTTTGAGGAGCTAAACTCAGAGATGTTCAAGAAGAC
GTTGGAACCGGTACAAAAAGCCCTTGCAGACGCCAAGTTAGATAAATCAC
AAATTCATGAAATCGTTTTGGTTGGAGGATCAACAAGAATCCCGAAAATC
CGAAAGATGTTACAAGATTATTTCAACGGGAAATCACTCTGTAATTCTGT
CAACCCAGATGAAGCTGTTGCATATGGAGCTGCCATCCAAGCTGCCATCT
TGACTGGCTCAAAAGACGATGCTGTTAAAGATCTACTATTGATTGACGTG
GCTCCTTTATCACTTGGTATTGAGACAGCTGGAGgagtgatgacgtcact
catcaaaCGAAACACCAAAATCCCATGCAATCAAGCTCAAACCTTCACAA
CGTACTCCGACAATCAACCCGGTGTCAGCATCCAAGTCTTTGAAGGTGAA
CGAAGTATGACCAAAGATAACCATCGACTTGGAGAATTTGAACTTTCTGG
AATCGCACCAGCCCCAAGAGGTGTACCGCAGATCGAAGTTACTTTCGATA
TCGATGCTAATGGTATTTTAAATGTGACAGCCAAAGACAAGAGCACTGGC
AAAGATGCACACATTACCATCAATAAAGGTCGATTATCCAAGGACGAGGT
TGAGAGGATGGTACAGGATGCTGAGAAACATCGTGCGGAAGACGAGCAGC
AAAAGGAACGAGTGGATGCAAGAAACGCACTTGAAGCCTACGCCTTCCAA
ATGAAAAGCACTGTTGATGACTCAAACATCAAAAAGAAGTTAAGTGAAGG
TGACCAAGAGACAATCCTCAAGAAATGCCAAGAAGTTTTGCAATGGATTG
ATGGCAATCAGCTGGCATCAAAGGAGGAATTCGAACACCAGAAAAGCGAA
TTGGAGAACGTTTGTCGACCCATCATGACCAAATTGCATCAAGGTGGAGC
AACAGGAGCTGGCCAATCCAACATGTCTCAAGGTGGACCAACTGTCGAAG
AAGTTGACTAAACAAAGTATATTCAAGAGAACATTATACCTGAGTATacc
tataaaaaagaaaaattatgatAATATCGCTGTTAAAAGAAACCATTGTA
GCAGTAGGAAACCATTATATTTatgtaaattttattgtttGATTTAAAGA
CATTGTATATTTCAAAAGAACtttgttgtaaaaaaaaatgaagttagtCT
TCATTCAACCATTATTTAActcaaaagatttgaaaaaagaacAGTCGTAA
AAGAACAagccattttgaaataaatattcATCTGTATTCTTATTGACCGT
AAATTTCATACACCCTTccggaaaaattggccaaaat Run BLAST on NCBI protein sequence of TCONS_00006378-protein >TCONS_00006378-protein ID=TCONS_00006378-protein|Name=TCONS_00006378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MGKAVGIDLGTTYSCVGIFQNGKVDIIANDAGNRTTPSYVAFNDVERLIG
DAAKNQAAMNPTNTIFDAKRLIGRNFVDQTVQSDIKLWPFKVVNKAGKPK
IEVDFKGERKIYTPEEISSMVLSKMKDTAENYLGEKVTDAVITVPAYFND
SQRQATKDAGVIAGLNVLRVVNEPTAAAIAYGLDKFTDDERNVLIFDLGG
GTFDVSVLAIDNGVFEVKSTRGDTHLGGEDFDNRMVEHFVAEIKRKHKKD
ITSNKRAIRRLRTACEKAKRTLSSTAQASIEIDSLFDGVDFFTSISRARF
EELNSEMFKKTLEPVQKALADAKLDKSQIHEIVLVGGSTRIPKIRKMLQD
YFNGKSLCNSVNPDEAVAYGAAIQAAILTGSKDDAVKDLLLIDVAPLSLG
IETAGGVMTSLIKRNTKIPCNQAQTFTTYSDNQPGVSIQVFEGERSMTKD
NHRLGEFELSGIAPAPRGVPQIEVTFDIDANGILNVTAKDKSTGKDAHIT
INKGRLSKDEVERMVQDAEKHRAEDEQQKERVDARNALEAYAFQMKSTVD
DSNIKKKLSEGDQETILKKCQEVLQWIDGNQLASKEEFEHQKSELENVCR
PIMTKLHQGGATGAGQSNMSQGGPTVEEVD Run BLAST on NCBI transcript from alignment at sc0000067:99183..103762+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006378 ID=TCONS_00006378|Name=TCONS_00006378|organism=Clytia hemisphaerica|type=transcript|length=4580bp|location=Sequence derived from alignment at sc0000067:99183..103762+ (Clytia hemisphaerica)
atatGGCAGACTTGAACAAAACCGAAAGTACGAGAATATTCTGGGTCGCA
GCAAGATTTCAACCAGAAACACAGCGAATTCGATGATTCTGGAATTTTTC
CAAACAATATATAAAGAGAGTAAATCTGAGAAATGTCATATTCAAACAAG
AGTTAAAAGTTGACAACAACGAGAAAAATAAAGACTTTAGAATTCACGAG
AAGAAAAACATCACAAAAATGGGAAAAGCAGTAGGAATCGATCTTGGAAC
AACTTATTCATGTGTTGGGATCTTTCAAAATGGAAAAGTTGATATCATCG
CGAATGATGCTGGCAACAGAACAACGCCAAGTTATGTTGCGTTCAATGAC
GTTGAGCGTCTCATTGGTGATGCAGCAAAAAACCAAGCTGCTATGAATCC
TACGAACACCATTTTCGACGCAAAACGATTGATCGGTAGAAATTTTGTGG
ATCAAACAGTCCAATCGGATATAAAGTTATGGCCATTTAAAGTTGTAAAC
AAAGCTGGAAAACCAAAGATTGAGGTATGTATTTTCAGTCAGTCTTATTC
TTTTTGTTAACTCTAATAGCTTATTGAAAAGCAATCAGAACTTGCCATCA
TCAGTATCCTATAATGTGTTATTTTCTTTATTACTCAATGtttttatttt
ttgttgcaCGTCAGTTGTATACAATAAATTGACAtttaatttcatatttc
atattttcatttcaGGTCGATTTCAAAGGGGAACGAAAGATTTATACTCC
AGAAGAAATATCATCAATGgttttatcaaaaatgaaagataCTGCTGAAA
ATTATCTGGGAGAGAAAGTTACAGATGCAGTCATTACAGTCCCAGCATAT
TTCAACGACAGCCAACGACAAGCCACAAAAGACGCAGGTGTGATTGCTGG
TTTGAACGTCTTGCGTGTTGTTAATGAACCAACAGCAGCAGCAATTGCTT
ACGGCCTTGACAAGTTCACTGATGAcgaaagaaatgttttgattttcgat
CTTGGAGGTGGCACCTTTGATGTCTCAGTACTGGCAATTGATAATGGAGT
CTTTGAAGTGAAATCAACCCGTGGCGACACGCACCTTGGTGGCGAAGACT
TTGACAACAGAATGGTGGAACATTTCGTAGCCGTAAGTCCTTCAATCATN
GGCAACAGAACAACGCCAAGTTATGTTGCGTTCAATGACGTTGAGCGTCT
CATTGGTGATGCAGCAAAAAACCAAGCTGCTATGAATCCTACTAACACCA
TTTTCGACGCAAAACGATTGATCGGTAGAAATTTTGTGGATCAAACAGTC
CAATCGGATATAAAGTTATGGCCATTTAAAGTTGTAAACAAAGCTGGAAA
ACCAAAGATTGAGGTATGTATTTTCAGTCAGTCTTATTCTTTTTGTTAAC
TCTAATAGCTTATTGAAAAGCAATCAGAACTTGCCATCATCAGTATCCTA
TAATGTGTTATTTTCTTTATTactcaatgtttttattttttgttgcaCGT
CAGTTGTATACAATAAATTGACAtttaatttcatatttcatattttcatt
tcaGGTCGATTTCAAAGGGGAACGAAAGATTTATACTCCAGAAGAAATAT
CATCAATGgttttatcaaaaatgaaagataCTGCTGAAAATTATCTGGGA
GAGAAAGTTACAGATGCAGTCATTACAGTCCCAGCATATTTCAACGACAG
CCAACGACAAGCCACAAAAGACGCAGGTGTGATTGCTGGTTTGAACGTCT
TGCGTGTTGTTAATGAACCAACAGCAGCAGCAATTGCTTACGGCCTTGAC
AAGTTCACTGATGAcgaaagaaatgttttgattttcgatCTTGGAGGTGG
CACCTTTGATGTCTCAGTACTGGCAATTGATAATGGAGTCTTTGAAGTGA
AATCAACCCGTGGCGACACGCACCTTGGTGGCGAAGACTTTGACAACAGA
ATGGTGGAACATTTCGTAGCCGTAAGTCCTTCAATCATAATTTTTTCATC
TCTTATTCATGTCATTAAGGAGTATAAGATAATAAATCTTTATAAATAAA
AGCATCAGCTTTGCATAAATCGAGACATTTGACAACACCGGTTAAAAAAG
TAGTGCATCGGACCTAATTTTAGATCAACATGGTATGTGAGACTTAATTA
TTTATCAAGAANTTCTTTTTGTTAACTCTAATAGCTTATTGAAAAGCAAT
CAGAACTTGCCATCATCAGTATCCTATAATGTGTTATTTTCTTTATTact
caatgtttttattttttgttgcaCGTCAGTTGTATACAATAAATTGACAt
ttaatttcatatttcatattttcatttcaGGTCGATTTCAAAGGGGAACG
AAAGATTTATACTCCAGAAGAAATATCATCAATGgttttatcaaaaatga
aagataCTGCTGAAAATTATCTGGGAGAGAAAGTTACAGATGCAGTCATT
ACAGTCCCAGCATATTTCAACGACAGCCAACGACAAGCCACAAAAGACGC
AGGTGTGATTGCTGGTTTGAACGTCTTGCGTGTTGTTAATGAACCAACAG
CAGCAGCAATTGCTTACGGCCTTGACAAGTTCACTGATGAcgaaagaaat
gttttgattttcgatCTTGGAGGTGGCACCTTTGATGTCTCAGTACTGGC
AATTGATAATGGAGTCTTTGAAGTGAAATCAACCCGTGGCGACACGCACC
TTGGTGGCGAAGACTTTGACAACAGAATGGTGGAACATTTCGTAGCCGTA
AGTCCTTCAATCATAATTTTTTCATCTCTTATTCATGTCATTAAGGAGTA
TAAGATAATAAATCTTTATAAATAAAAGCATCAGCTTTGCATAAATCGAG
ACATTTGACAACACCGGTTAAAAAAGTAGTGCATCGGACCTAATTTTAGA
TCAACATGGTATATGAGACTTAATTATTTATCAAGAAATTCTATTTTGCG
CACTTCTTGCCTACTCCACTGAATTGTGTTGGATGAGTCGACAATTCTTG
AGAATATCCATTAAGATTgactaatttttctttttctttcaagtAAGTGC
ATTGACTAATTTGTTTCTCTCTTTCTACCTTCAGGAGATCAAACGAAAAC
ACAAGAAAGATATCACATCCAACAAACGAGCTATCAGACGTTTAAGAACA
GCTTGCGAAAAAGCCAAACGAACTCTCTCTTCGACAGCTCAAGCTTCTAT
CGAGATCGATTCCCTTTTCGACGGAGTTGATTTCTTCACATCTATCTCCA
GAGCAAGGTTTGAGGAGCTAAACTCAGAGATGTTCAAGAAGACGTTGGAA
CCGGTACAAAAAGCCCTTGCAGACGCCAAGTTAGATAAATCACAAATTCA
TGAAATCGTTTTGGTTGGAGGATCAACAAGAATCCCGAAAATCCGAAAGA
TGTTACAAGATTATTTCAACGGGAAATCACTCTGTAATTCTGTCAACCCA
GATGAAGCTGTTGCATATGGAGCTGCCATCCAAGCTGCCATCTTGACTGG
CTCAAAAGACGATGCTGTTAAAGATCTACTATTGATTGACGTGGCTCCTT
TATCACTTGGTATTGAGACAGCTGGAGgagtgatgacgtcactcatcaaa
CGAAACACCAAAATCCCATGCAATCAAGCTCAAACCTTCACAACGTACTC
CGACAATCAACCCGGTGTCAGCATCCAAGTCTTTGAAGGTGAACGAAGTA
TGACCAAAGATAACCATCGACTTGGAGAATTTGAACTTTCTGGAATCGCA
CCAGCCCCAAGAGGTGTACCGCAGATCGAAGTTACTTTCGATATCGATGC
TAATGGTATTTTAAATGTGACAGCCAAAGACAAGAGCACTGGCAAAGATG
CACACATTACCATCAATAAAGGTCGATTATCCAAGGACGAGGTTGAGAGG
ATGGTACAGGATGCTGAGAAACATCGTGCGGAAGACGAGCAGCAAAAGGA
ACGAGTGGATGCAAGAAACGCACTTGAAGCCTACGCCTTCCAAATGAAAA
GCACTGTTGATGACTCAAACATCAAAAAGAAGTTAAGTGAAGGTGACCAA
GAGACAATCCTCAAGAAATGCCAAGAAGTTTTGCAATGGATTGATGGCAA
TCAGCTGGCATCAAAGGAGGAATTCGAACACCAGAAAAGCGAATTGGAGA
ACGTTTGTCGACCCATCATGACCAAATTGCATCAAGGTGGAGCAACAGGA
GCTGGCCAATCCAACATGTCTCAAGGTGGACCAACTGTCGAAGAAGTTGA
CTAAACAAAGTATATTCAAGAGAACATTATACCTGAGTATacctataaaa
aagaaaaattatgatAATATCGCTGTTAAAAGAAACCATTGTAGCAGTAG
GAAACCATTATATTTatgtaaattttattgtttGATTTAAAGACATTGTA
TATTTCAAAAGAACtttgttgtaaaaaaaaatgaagttagtCTTCATTCA
ACCATTATTTAActcaaaagatttgaaaaaagaacAGTCGTAAAAGAACA
agccattttgaaataaatattcATCTGTATTCTTATTGACCGTAAATTTC
ATACACCCTTccggaaaaattggccaaaat Coding sequence (CDS) from alignment at sc0000067:99183..103762+ >TCONS_00006378 ID=TCONS_00006378|Name=TCONS_00006378|organism=Clytia hemisphaerica|type=CDS|length=7572bp|location=Sequence derived from alignment at sc0000067:99183..103762+ (Clytia hemisphaerica)
ATGGGAAAAGCAGTAGGAATCGATCTTGGAACAACTTATTCATGTGTTGG
GATCTTTCAAAATGGAAAAGTTGATATCATCGCGAATGATGCTGGCAACA
GAACAACGCCAAGTTATGTTGCGTTCAATGACGTTGAGCGTCTCATTGGT
GATGCAGCAAAAAACCAAGCTGCTATGAATCCTACGAACACCATTTTCGA
CGCAAAACGATTGATCGGTAGAAATTTTGTGGATCAAACAGTCCAATCGG
ATATAAAGTTATGGCCATTTAAAGTTGTAAACAAAGCTGGAAAACCAAAG
ATTGAGGTCGATTTCAAAGGGGAACGAAAGATTTATACTCCAGAAGAAAT
ATCATCAATGgttttatcaaaaatgaaagataCTGCTGAAAATTATCTGG
GAGAGAAAGTTACAGATGCAGTCATTACAGTCCCAGCATATTTCAACGAC
AGCCAACGACAAGCCACAAAAGACGCAGGTGTGATTGCTGGTTTGAACGT
CTTGCGTGTTGTTAATGAACCAACAGCAGCAGCAATTGCTTACGGCCTTG
ACAAGTTCACTGATGAcgaaagaaatgttttgattttcgatCTTGGAGGT
GGCACCTTTGATGTCTCAGTACTGGCAATTGATAATGGAGTCTTTGAAGT
GAAATCAACCCGTGGCGACACGCACCTTGGTGGCGAAGACTTTGACAACA
GAATGGTGGAACATTTCGTAGCCGAGATCAAACGAAAACACAAGAAAGAT
ATCACATCCAACAAACGAGCTATCAGACGTTTAAGAACAGCTTGCGAAAA
AGCCAAACGAACTCTCTCTTCGACAGCTCAAGCTTCTATCGAGATCGATT
CCCTTTTCGACGGAGTTGATTTCTTCACATCTATCTCCAGAGCAAGGTTT
GAGGAGCTAAACTCAGAGATGTTCAAGAAGACGTTGGAACCGGTACAAAA
AGCCCTTGCAGACGCCAAGTTAGATAAATCACAAATTCATGAAATCGTTT
TGGTTGGAGGATCAACAAGAATCCCGAAAATCCGAAAGATGTTACAAGAT
TATTTCAACGGGAAATCACTCTGTAATTCTGTCAACCCAGATGAAGCTGT
TGCATATGGAGCTGCCATCCAAGCTGCCATCTTGACTGGCTCAAAAGACG
ATGCTGTTAAAGATCTACTATTGATTGACGTGGCTCCTTTATCACTTGGT
ATTGAGACAGCTGGAGgagtgatgacgtcactcatcaaaCGAAACACCAA
AATCCCATGCAATCAAGCTCAAACCTTCACAACGTACTCCGACAATCAAC
CCGGTGTCAGCATCCAAGTCTTTGAAGGTGAACGAAGTATGACCAAAGAT
AACCATCGACTTGGAGAATTTGAACTTTCTGGAATCGCACCAGCCCCAAG
AGGTGTACCGCAGATCGAAGTTACTTTCGATATCGATGCTAATGGTATTT
TAAATGTGACAGCCAAAGACAAGAGCACTGGCAAAGATGCACACATTACC
ATCAATAAAGGTCGATTATCCAAGGACGAGGTTGAGAGGATGGTACAGGA
TGCTGAGAAACATCGTGCGGAAGACGAGCAGCAAAAGGAACGAGTGGATG
CAAGAAACGCACTTGAAGCCTACGCCTTCCAAATGAAAAGCACTGTTGAT
GACTCAAACATCAAAAAGAAGTTAAGTGAAGGTGACCAAGAGACAATCCT
CAAGAAATGCCAAGAAGTTTTGCAATGGATTGATGGCAATCAGCTGGCAT
CAAAGGAGGAATTCGAACACCAGAAAAGCGAATTGGAGAACGTTTGTCGA
CCCATCATGACCAAATTGCATCAAGGTGGAGCAACAGGAGCTGGCCAATC
CAACATGTCTCAAGGTGGACCAACTGTCGAAGAAGTTGACTAAATGGGAA
AAGCAGTAGGAATCGATCTTGGAACAACTTATTCATGTGTTGGGATCTTT
CAAAATGGAAAAGTTGATATCATCGCGAATGATGCTGGCAACAGAACAAC
GCCAAGTTATGTTGCGTTCAATGACGTTGAGCGTCTCATTGGTGATGCAG
CAAAAAACCAAGCTGCTATGAATCCTACGAACACCATTTTCGACGCAAAA
CGATTGATCGGTAGAAATTTTGTGGATCAAACAGTCCAATCGGATATAAA
GTTATGGCCATTTAAAGTTGTAAACAAAGCTGGAAAACCAAAGATTGAGG
TCGATTTCAAAGGGGAACGAAAGATTTATACTCCAGAAGAAATATCATCA
ATGgttttatcaaaaatgaaagataCTGCTGAAAATTATCTGGGAGAGAA
AGTTACAGATGCAGTCATTACAGTCCCAGCATATTTCAACGACAGCCAAC
GACAAGCCACAAAAGACGCAGGTGTGATTGCTGGTTTGAACGTCTTGCGT
GTTGTTAATGAACCAACAGCAGCAGCAATTGCTTACGGCCTTGACAAGTT
CACTGATGAcgaaagaaatgttttgattttcgatCTTGGAGGTGGCACCT
TTGATGTCTCAGTACTGGCAATTGATAATGGAGTCTTTGAAGTGAAATCA
ACCCGTGGCGACACGCACCTTGGTGGCGAAGACTTTGACAACAGAATGGT
GGAACATTTCGTAGCCGAGATCAAACGAAAACACAAGAAAGATATCACAT
CCAACAAACGAGCTATCAGACGTTTAAGAACAGCTTGCGAAAAAGCCAAA
CGAACTCTCTCTTCGACAGCTCAAGCTTCTATCGAGATCGATTCCCTTTT
CGACGGAGTTGATTTCTTCACATCTATCTCCAGAGCAAGGTTTGAGGAGC
TAAACTCAGAGATGTTCAAGAAGACGTTGGAACCGGTACAAAAAGCCCTT
GCAGACGCCAAGTTAGATAAATCACAAATTCATGAAATCGTTTTGGTTGG
AGGATCAACAAGAATCCCGAAAATCCGAAAGATGTTACAAGATTATTTCA
ACGGGAAATCACTCTGTAATTCTGTCAACCCAGATGAAGCTGTTGCATAT
GGAGCTGCCATCCAAGCTGCCATCTTGACTGGCTCAAAAGACGATGCTGT
TAAAGATCTACTATTGATTGACGTGGCTCCTTTATCACTTGGTATTGAGA
CAGCTGGAGgagtgatgacgtcactcatcaaaCGAAACACCAAAATCCCA
TGCAATCAAGCTCAAACCTTCACAACGTACTCCGACAATCAACCCGGTGT
CAGCATCCAAGTCTTTGAAGGTGAACGAAGTATGACCAAAGATAACCATC
GACTTGGAGAATTTGAACTTTCTGGAATCGCACCAGCCCCAAGAGGTGTA
CCGCAGATCGAAGTTACTTTCGATATCGATGCTAATGGTATTTTAAATGT
GACAGCCAAAGACAAGAGCACTGGCAAAGATGCACACATTACCATCAATA
AAGGTCGATTATCCAAGGACGAGGTTGAGAGGATGGTACAGGATGCTGAG
AAACATCGTGCGGAAGACGAGCAGCAAAAGGAACGAGTGGATGCAAGAAA
CGCACTTGAAGCCTACGCCTTCCAAATGAAAAGCACTGTTGATGACTCAA
ACATCAAAAAGAAGTTAAGTGAAGGTGACCAAGAGACAATCCTCAAGAAA
TGCCAAGAAGTTTTGCAATGGATTGATGGCAATCAGCTGGCATCAAAGGA
GGAATTCGAACACCAGAAAAGCGAATTGGAGAACGTTTGTCGACCCATCA
TGACCAAATTGCATCAAGGTGGAGCAACAGGAGCTGGCCAATCCAACATG
TCTCAAGGTGGACCAACTGTCGAAGAAGTTGACTAAATGGGAAAAGCAGT
AGGAATCGATCTTGGAACAACTTATTCATGTGTTGGGATCTTTCAAAATG
GAAAAGTTGATATCATCGCGAATGATGCTGGCAACAGAACAACGCCAAGT
TATGTTGCGTTCAATGACGTTGAGCGTCTCATTGGTGATGCAGCAAAAAA
CCAAGCTGCTATGAATCCTACGAACACCATTTTCGACGCAAAACGATTGA
TCGGTAGAAATTTTGTGGATCAAACAGTCCAATCGGATATAAAGTTATGG
CCATTTAAAGTTGTAAACAAAGCTGGAAAACCAAAGATTGAGGTCGATTT
CAAAGGGGAACGAAAGATTTATACTCCAGAAGAAATATCATCAATGgttt
tatcaaaaatgaaagataCTGCTGAAAATTATCTGGGAGAGAAAGTTACA
GATGCAGTCATTACAGTCCCAGCATATTTCAACGACAGCCAACGACAAGC
CACAAAAGACGCAGGTGTGATTGCTGGTTTGAACGTCTTGCGTGTTGTTA
ATGAACCAACAGCAGCAGCAATTGCTTACGGCCTTGACAAGTTCACTGAT
GAcgaaagaaatgttttgattttcgatCTTGGAGGTGGCACCTTTGATGT
CTCAGTACTGGCAATTGATAATGGAGTCTTTGAAGTGAAATCAACCCGTG
GCGACACGCACCTTGGTGGCGAAGACTTTGACAACAGAATGGTGGAACAT
TTCGTAGCCGAGATCAAACGAAAACACAAGAAAGATATCACATCCAACAA
ACGAGCTATCAGACGTTTAAGAACAGCTTGCGAAAAAGCCAAACGAACTC
TCTCTTCGACAGCTCAAGCTTCTATCGAGATCGATTCCCTTTTCGACGGA
GTTGATTTCTTCACATCTATCTCCAGAGCAAGGTTTGAGGAGCTAAACTC
AGAGATGTTCAAGAAGACGTTGGAACCGGTACAAAAAGCCCTTGCAGACG
CCAAGTTAGATAAATCACAAATTCATGAAATCGTTTTGGTTGGAGGATCA
ACAAGAATCCCGAAAATCCGAAAGATGTTACAAGATTATTTCAACGGGAA
ATCACTCTGTAATTCTGTCAACCCAGATGAAGCTGTTGCATATGGAGCTG
CCATCCAAGCTGCCATCTTGACTGGCTCAAAAGACGATGCTGTTAAAGAT
CTACTATTGATTGACGTGGCTCCTTTATCACTTGGTATTGAGACAGCTGG
AGgagtgatgacgtcactcatcaaaCGAAACACCAAAATCCCATGCAATC
AAGCTCAAACCTTCACAACGTACTCCGACAATCAACCCGGTGTCAGCATC
CAAGTCTTTGAAGGTGAACGAAGTATGACCAAAGATAACCATCGACTTGG
AGAATTTGAACTTTCTGGAATCGCACCAGCCCCAAGAGGTGTACCGCAGA
TCGAAGTTACTTTCGATATCGATGCTAATGGTATTTTAAATGTGACAGCC
AAAGACAAGAGCACTGGCAAAGATGCACACATTACCATCAATAAAGGTCG
ATTATCCAAGGACGAGGTTGAGAGGATGGTACAGGATGCTGAGAAACATC
GTGCGGAAGACGAGCAGCAAAAGGAACGAGTGGATGCAAGAAACGCACTT
GAAGCCTACGCCTTCCAAATGAAAAGCACTGTTGATGACTCAAACATCAA
AAAGAAGTTAAGTGAAGGTGACCAAGAGACAATCCTCAAGAAATGCCAAG
AAGTTTTGCAATGGATTGATGGCAATCAGCTGGCATCAAAGGAGGAATTC
GAACACCAGAAAAGCGAATTGGAGAACGTTTGTCGACCCATCATGACCAA
ATTGCATCAAGGTGGAGCAACAGGAGCTGGCCAATCCAACATGTCTCAAG
GTGGACCAACTGTCGAAGAAGTTGACTAAATGGGAAAAGCAGTAGGAATC
GATCTTGGAACAACTTATTCATGTGTTGGGATCTTTCAAAATGGAAAAGT
TGATATCATCGCGAATGATGCTGGCAACAGAACAACGCCAAGTTATGTTG
CGTTCAATGACGTTGAGCGTCTCATTGGTGATGCAGCAAAAAACCAAGCT
GCTATGAATCCTACGAACACCATTTTCGACGCAAAACGATTGATCGGTAG
AAATTTTGTGGATCAAACAGTCCAATCGGATATAAAGTTATGGCCATTTA
AAGTTGTAAACAAAGCTGGAAAACCAAAGATTGAGGTCGATTTCAAAGGG
GAACGAAAGATTTATACTCCAGAAGAAATATCATCAATGgttttatcaaa
aatgaaagataCTGCTGAAAATTATCTGGGAGAGAAAGTTACAGATGCAG
TCATTACAGTCCCAGCATATTTCAACGACAGCCAACGACAAGCCACAAAA
GACGCAGGTGTGATTGCTGGTTTGAACGTCTTGCGTGTTGTTAATGAACC
AACAGCAGCAGCAATTGCTTACGGCCTTGACAAGTTCACTGATGAcgaaa
gaaatgttttgattttcgatCTTGGAGGTGGCACCTTTGATGTCTCAGTA
CTGGCAATTGATAATGGAGTCTTTGAAGTGAAATCAACCCGTGGCGACAC
GCACCTTGGTGGCGAAGACTTTGACAACAGAATGGTGGAACATTTCGTAG
CCGAGATCAAACGAAAACACAAGAAAGATATCACATCCAACAAACGAGCT
ATCAGACGTTTAAGAACAGCTTGCGAAAAAGCCAAACGAACTCTCTCTTC
GACAGCTCAAGCTTCTATCGAGATCGATTCCCTTTTCGACGGAGTTGATT
TCTTCACATCTATCTCCAGAGCAAGGTTTGAGGAGCTAAACTCAGAGATG
TTCAAGAAGACGTTGGAACCGGTACAAAAAGCCCTTGCAGACGCCAAGTT
AGATAAATCACAAATTCATGAAATCGTTTTGGTTGGAGGATCAACAAGAA
TCCCGAAAATCCGAAAGATGTTACAAGATTATTTCAACGGGAAATCACTC
TGTAATTCTGTCAACCCAGATGAAGCTGTTGCATATGGAGCTGCCATCCA
AGCTGCCATCTTGACTGGCTCAAAAGACGATGCTGTTAAAGATCTACTAT
TGATTGACGTGGCTCCTTTATCACTTGGTATTGAGACAGCTGGAGgagtg
atgacgtcactcatcaaaCGAAACACCAAAATCCCATGCAATCAAGCTCA
AACCTTCACAACGTACTCCGACAATCAACCCGGTGTCAGCATCCAAGTCT
TTGAAGGTGAACGAAGTATGACCAAAGATAACCATCGACTTGGAGAATTT
GAACTTTCTGGAATCGCACCAGCCCCAAGAGGTGTACCGCAGATCGAAGT
TACTTTCGATATCGATGCTAATGGTATTTTAAATGTGACAGCCAAAGACA
AGAGCACTGGCAAAGATGCACACATTACCATCAATAAAGGTCGATTATCC
AAGGACGAGGTTGAGAGGATGGTACAGGATGCTGAGAAACATCGTGCGGA
AGACGAGCAGCAAAAGGAACGAGTGGATGCAAGAAACGCACTTGAAGCCT
ACGCCTTCCAAATGAAAAGCACTGTTGATGACTCAAACATCAAAAAGAAG
TTAAGTGAAGGTGACCAAGAGACAATCCTCAAGAAATGCCAAGAAGTTTT
GCAATGGATTGATGGCAATCAGCTGGCATCAAAGGAGGAATTCGAACACC
AGAAAAGCGAATTGGAGAACGTTTGTCGACCCATCATGACCAAATTGCAT
CAAGGTGGAGCAACAGGAGCTGGCCAATCCAACATGTCTCAAGGTGGACC
AACTGTCGAAGAAGTTGACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006378-exon-sc0000067-1491911889:99183..99706 | TCONS_00006378-exon-sc0000067-1491911889:99183..99706 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1510915933:99183..99706 | TCONS_00006378-exon-sc0000067-1510915933:99183..99706 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1575043694:99183..99706 | TCONS_00006378-exon-sc0000067-1575043694:99183..99706 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1491911889:99898..100303 | TCONS_00006378-exon-sc0000067-1491911889:99898..100303 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1510915933:99898..100303 | TCONS_00006378-exon-sc0000067-1510915933:99898..100303 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1575043694:99898..100303 | TCONS_00006378-exon-sc0000067-1575043694:99898..100303 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1491911889:101143..101153 | TCONS_00006378-exon-sc0000067-1491911889:101143..101153 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1510915933:101143..101153 | TCONS_00006378-exon-sc0000067-1510915933:101143..101153 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1575043694:101143..101153 | TCONS_00006378-exon-sc0000067-1575043694:101143..101153 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1491911889:102267..103762 | TCONS_00006378-exon-sc0000067-1491911889:102267..103762 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1510915933:102267..103762 | TCONS_00006378-exon-sc0000067-1510915933:102267..103762 | Clytia hemisphaerica | exon |
| TCONS_00006378-exon-sc0000067-1575043694:102267..103762 | TCONS_00006378-exon-sc0000067-1575043694:102267..103762 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:99183..103762 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00006378 vs. Swiss-Prot (Human)
Match: HSP7C (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1) HSP 1 Score: 952.584 bits (2461), Expect = 0.000e+0 Identity = 456/609 (74.88%), Postives = 542/609 (89.00%), Query Frame = 3
Query: 222 GKAVGIDLGTTYSCVGIFQNGKVDIIANDAGNRTTPSYVAFNDVERLIGDAAKNQAAMNPTNTIFDAKRLIGRNFVDQTVQSDIKLWPFKVVNKAGKPKIEVDFKGERKIYTPEEISSMVLSKMKDTAENYLGEKVTDAVITVPAYFNDSQRQATKDAGVIAGLNVLRVVNEPTAAAIAYGLDKFTDDERNVLIFDLGGGTFDVSVLAIDNGVFEVKSTRGDTHLGGEDFDNRMVEHFVAEIKRKHKKDITSNKRAIRRLRTACEKAKRTLSSTAQASIEIDSLFDGVDFFTSISRARFEELNSEMFKKTLEPVQKALADAKLDKSQIHEIVLVGGSTRIPKIRKMLQDYFNGKSLCNSVNPDEXXXXXXXXXXXILTGSKDDAVKDLLLIDVAPLSLGIETAGGVMTSLIKRNTKIPCNQAQTFTTYSDNQPGVSIQVFEGERSMTKDNHRLGEFELSGIAPAPRGVPQIEVTFDIDANGILNVTAKDKSTGKDAHITI--NKGRLSKDEVERMVQDAEKHRAEDEQQKERVDARNALEAYAFQMKSTVDDSNIKKKLSEGDQETILKKCQEVLQWIDGNQLASKEEFEHQKSELENVCRPIMTKLHQ 2042
G AVGIDLGTTYSCVG+FQ+GKV+IIAND GNRTTPSYVAF D ERLIGDAAKNQ AMNPTNT+FDAKRLIGR F D VQSD+K WPF VVN AG+PK++V++KGE K + PEE+SSMVL+KMK+ AE YLG+ VT+AV+TVPAYFNDSQRQATKDAG IAGLNVLR++NEPTAAAIAYGLDK ERNVLIFDLGGGTFDVS+L I++G+FEVKST GDTHLGGEDFDNRMV HF+AE KRKHKKDI+ NKRA+RRLRTACE+AKRTLSS+ QASIEIDSL++G+DF+TSI+RARFEELN+++F+ TL+PV+KAL DAKLDKSQIH+IVLVGGSTRIPKI+K+LQD+FNGK L S+NPDEAVAYGAA+QAAIL+G K + V+DLLL+DV PLSLGIETAGGVMT LIKRNT IP Q QTFTTYSDNQPGV IQV+EGER+MTKDN+ LG+FEL+GI PAPRGVPQIEVTFDIDANGILNV+A DKSTGK+ ITI +KGRLSK+++ERMVQ+AEK++AEDE+Q+++V ++N+LE+YAF MK+TV+D ++ K+++ D++ IL KC E++ W+D NQ A KEEFEHQ+ ELE VC PI+TKL+Q
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
The following BLAST results are available for this feature:
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