XLOC_003650 (gene) - C. hemisphaerica

Overview
NameXLOC_003650
Unique NameXLOC_003650
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:99153..106489+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003650 ID=XLOC_003650|Name=XLOC_003650|organism=Clytia hemisphaerica|type=gene|length=7337bp|location=Sequence derived from alignment at sc0000067:99153..106489+ (Clytia hemisphaerica)
agATAATTTATGCAATggaaacaacaacaaatatGGCAGACTTGAACAAA ACCGAAAGTACGAGAATATTCTGGGTCGCAGCAAGATTTCAACCAGAAAC ACAGCGAATTCGATGATTCTGGAATTTTTCCAAACAATATATAAAGAGAG TAAATCTGAGAAATGTCATATTCAAACAAGAGTTAAAAGTTGACAACAAC GAGAAAAATAAAGACTTTAGAATTCACGAGAAGAAAAACATCACAAAAAT GGGAAAAGCAGTAGGAATCGATCTTGGAACAACTTATTCATGTGTTGGGA TCTTTCAAAATGGAAAAGTTGATATCATCGCGAATGATGCTGGCAACAGA ACAACGCCAAGTTATGTTGCGTTCAATGACGTTGAGCGTCTCATTGGTGA TGCAGCAAAAAACCAAGCTGCTATGAATCCTACGAACACCATTTTCGACG CAAAACGATTGATCGGTAGAAATTTTGTGGATCAAACAGTCCAATCGGAT ATAAAGTTATGGCCATTTAAAGTTGTAAACAAAGCTGGAAAACCAAAGAT TGAGGTATGTATTTTCAGTCAGTCTTATTCTTTTTGTTAACTCTAATAGC TTATTGAAAAGCAATCAGAACTTGCCATCATCAGTATCCTATAATGTGTT ATTTTCTTTATTACTCAATGtttttattttttgttgcaCGTCAGTTGTAT ACAATAAATTGACAtttaatttcatatttcatattttcatttcaGGTCGA TTTCAAAGGGGAACGAAAGATTTATACTCCAGAAGAAATATCATCAATGg ttttatcaaaaatgaaagataCTGCTGAAAATTATCTGGGAGAGAAAGTT ACAGATGCAGTCATTACAGTCCCAGCATATTTCAACGACAGCCAACGACA AGCCACAAAAGACGCAGGTGTGATTGCTGGTTTGAACGTCTTGCGTGTTG TTAATGAACCAACAGCAGCAGCAATTGCTTACGGCCTTGACAAGTTCACT GATGAcgaaagaaatgttttgattttcgatCTTGGAGGTGGCACCTTTGA TGTCTCAGTACTGGCAATTGATAATGGAGTCTTTGAAGTGAAATCAACCC GTGGCGACACGCACCTTGGTGGCGAAGACTTTGACAACAGAATGGTGGAA CATTTCGTAGCCGTAAGTCCTTCAATCATNGGCAACAGAACAACGCCAAG TTATGTTGCGTTCAATGACGTTGAGCGTCTCATTGGTGATGCAGCAAAAA ACCAAGCTGCTATGAATCCTACTAACACCATTTTCGACGCAAAACGATTG ATCGGTAGAAATTTTGTGGATCAAACAGTCCAATCGGATATAAAGTTATG GCCATTTAAAGTTGTAAACAAAGCTGGAAAACCAAAGATTGAGGTATGTA TTTTCAGTCAGTCTTATTCTTTTTGTTAACTCTAATAGCTTATTGAAAAG CAATCAGAACTTGCCATCATCAGTATCCTATAATGTGTTATTTTCTTTAT TactcaatgtttttattttttgttgcaCGTCAGTTGTATACAATAAATTG ACAtttaatttcatatttcatattttcatttcaGGTCGATTTCAAAGGGG AACGAAAGATTTATACTCCAGAAGAAATATCATCAATGgttttatcaaaa atgaaagataCTGCTGAAAATTATCTGGGAGAGAAAGTTACAGATGCAGT CATTACAGTCCCAGCATATTTCAACGACAGCCAACGACAAGCCACAAAAG ACGCAGGTGTGATTGCTGGTTTGAACGTCTTGCGTGTTGTTAATGAACCA ACAGCAGCAGCAATTGCTTACGGCCTTGACAAGTTCACTGATGAcgaaag aaatgttttgattttcgatCTTGGAGGTGGCACCTTTGATGTCTCAGTAC TGGCAATTGATAATGGAGTCTTTGAAGTGAAATCAACCCGTGGCGACACG CACCTTGGTGGCGAAGACTTTGACAACAGAATGGTGGAACATTTCGTAGC CGTAAGTCCTTCAATCATAATTTTTTCATCTCTTATTCATGTCATTAAGG AGTATAAGATAATAAATCTTTATAAATAAAAGCATCAGCTTTGCATAAAT CGAGACATTTGACAACACCGGTTAAAAAAGTAGTGCATCGGACCTAATTT TAGATCAACATGGTATGTGAGACTTAATTATTTATCAAGAANTTCTTTTT GTTAACTCTAATAGCTTATTGAAAAGCAATCAGAACTTGCCATCATCAGT ATCCTATAATGTGTTATTTTCTTTATTactcaatgtttttattttttgtt gcaCGTCAGTTGTATACAATAAATTGACAtttaatttcatatttcatatt ttcatttcaGGTCGATTTCAAAGGGGAACGAAAGATTTATACTCCAGAAG AAATATCATCAATGgttttatcaaaaatgaaagataCTGCTGAAAATTAT CTGGGAGAGAAAGTTACAGATGCAGTCATTACAGTCCCAGCATATTTCAA CGACAGCCAACGACAAGCCACAAAAGACGCAGGTGTGATTGCTGGTTTGA ACGTCTTGCGTGTTGTTAATGAACCAACAGCAGCAGCAATTGCTTACGGC CTTGACAAGTTCACTGATGAcgaaagaaatgttttgattttcgatCTTGG AGGTGGCACCTTTGATGTCTCAGTACTGGCAATTGATAATGGAGTCTTTG AAGTGAAATCAACCCGTGGCGACACGCACCTTGGTGGCGAAGACTTTGAC AACAGAATGGTGGAACATTTCGTAGCCGTAAGTCCTTCAATCATAATTTT TTCATCTCTTATTCATGTCATTAAGGAGTATAAGATAATAAATCTTTATA AATAAAAGCATCAGCTTTGCATAAATCGAGACATTTGACAACACCGGTTA AAAAAGTAGTGCATCGGACCTAATTTTAGATCAACATGGTATATGAGACT TAATTATTTATCAAGAAATTCTATTTTGCGCACTTCTTGCCTACTCCACT GAATTGTGTTGGATGAGTCGACAATTCTTGAGAATATCCATTAAGATTga ctaatttttctttttctttcaagtAAGTGCATTGACTAATTTGTTTCTCT CTTTCTACCTTCAGGAGATCAAACGAAAACACAAGAAAGATATCACATCC AACAAACGAGCTATCAGACGTTTAAGAACAGCTTGCGAAAAAGCCAAACG AACTCTCTCTTCGACAGCTCAAGCTTCTATCGAGATCGATTCCCTTTTCG ACGGAGTTGATTTCTTCACATCTATCTCCAGAGCAAGGTTTGAGGAGCTA AACTCAGAGATGTTCAAGAAGACGTTGGAACCGGTACAAAAAGCCCTTGC AGACGCCAAGTTAGATAAATCACAAATTCATGAAATCGTTTTGGTTGGAG GATCAACAAGAATCCCGAAAATCCGAAAGATGTTACAAGATTATTTCAAC GGGAAATCACTCTGTAATTCTGTCAACCCAGATGAAGCTGTTGCATATGG AGCTGCCATCCAAGCTGCCATCTTGACTGGCTCAAAAGACGATGCTGTTA AAGATCTACTATTGATTGACGTGGCTCCTTTATCACTTGGTATTGAGACA GCTGGAGgagtgatgacgtcactcatcaaaCGAAACACCAAAATCCCATG CAATCAAGCTCAAACCTTCACAACGTACTCCGACAATCAACCCGGTGTCA GCATCCAAGTCTTTGAAGGTGAACGAAGTATGACCAAAGATAACCATCGA CTTGGAGAATTTGAACTTTCTGGAATCGCACCAGCCCCAAGAGGTGTACC GCAGATCGAAGTTACTTTCGATATCGATGCTAATGGTATTTTAAATGTGA CAGCCAAAGACAAGAGCACTGGCAAAGATGCACACATTACCATCAATAAA GGTCGATTATCCAAGGACGAGGTTGAGAGGATGGTACAGGATGCTGAGAA ACATCGTGCGGAAGACGAGCAGCAAAAGGAACGAGTGGATGCAAGAAACG CACTTGAAGCCTACGCCTTCCAAATGAAAAGCACTGTTGATGACTCAAAC ATCAAAAAGAAGTTAAGTGAAGGTGACCAAGAGACAATCCTCAAGAAATG CCAAGAAGTTTTGCAATGGATTGATGGCAATCAGCTGGCATCAAAGGAGG AATTCGAACACCAGAAAAGCGAATTGGAGAACGTTTGTCGACCCATCATG ACCAAATTGCATCAAGGTGGAGCAACAGGAGCTGGCCAATCCAACATGTC TCAAGGTGGACCAACTGTCGAAGAAGTTGACTAAACAAAGTATATTCAAG AGAACATTATACCTGAGTATacctataaaaaagaaaaattatgatAATAT CGCTGTTAAAAGAAACCATTGTAGCAGTAGGAAACCATTATATTTatgta aattttattgtttGATTTAAAGACATTGTATATTTCAAAAGAACtttgtt gtaaaaaaaaatgaagttagtCTTCATTCAACCATTATTTAActcaaaag atttgaaaaaagaacAGTCGTAAAAGAACAagccattttgaaataaatat tcATCTGTATTCTTATTGACCGTAAATTTCATACACCCTTccggaaaaat tggccaaaatattgtcccgctggaaaattatcctccaatttttgtcccac tGAGAATAATAAATAAACCAAttttcactgcaaaatatttactatttttc ccatccccactgaattatCTGACttgtctgtgagaagggggtgttttcaT AAAAGCTATGATGTAAGTTCATCCACCTAGCCCTGGAATAAAATCTCCCG AATCCTCGATCCTAAAAACTTGCAAAGGTTTGAACATGAAACAACGTTTG AATTGCTTACCGTCAAATACCGTTTAACAAGTCATGGTTTTATCAAAAAG AAGGGTTGAAAATAACGTTAATGAAACGATGATTTATTTTTAACACATTT CATCAGTCATACAAAATTAATTTAACTAACATCTAATACTAACAATCTAT CAAAAAATACATATTATACATTATTCGACCGCAATCGAAACATTATTATA CATTATAGCATGAAACAAAAGGCCGTTGCACTTTTCCATGTTAGGGTACT GTGATTGATACGTCCAATTCTGAAATCCACTCAAAGTGAACGGCTTGGAA CTTGGGGATGTATTGAATGGGATAAAATAGGTCTCCATAGTCCTCCCGAT CATGAAAAATGAGACATGAAAGTATTGGGATATACCTTGAGTTTATTAAT TTTGGCGTGTACCTAATTTGGCGGCTGGCCGAAATGCGATTTTTGACAGG GATTTAATTAGGCGTGTGGGGAAATTTTAGGCACTtgtaaatcaaaaatt atttggtattttgaaagtttttacttaaaaatgctcattttagatagaat ttctatcctaaaaagattttatcaaatttagcgGGTATTTAATATTTACC AAAACCCGTCAAATTTAATTCCCGGAAAAATAAATACACTTAAGATACTT AAGACCTCgccatttttttttcagatgtaCTGTTGCTTTTTATGTCTTAT ATATTCAATCAAAGAGACAGCTTTCGAGCGAATGAGCAGTACCCAATAAT TTTGAGACAACCACTTTTATGTTTTACATTCAATCGACGAGAGAGGTTTC GAGTGTCGTCAATTCCTCCTCGTCATCAACGATTTTGTAGCCTAACAAAT TCATCACTTCATAACATTCAGTCTCTATCATCCTAACCGCCTGATACTGC AATTGTGTGCGCCAATTGTGTACTGAGTTGGTCAGGTTCTTAGCCATGTA TTCTTCCATCCACCCTGAAGAGGACGAGCTTTGTTGTGAATTCATGAACG AGAGGCGGCTGCTATCACCGCCTGAACCATAAGCGATTTTATCCAACCAT AAGCGCACCTGTGGAGCCATGGGAATACCCACAAATTTATGAACCAACTC GGCTATTTGGTGTGGATTTGTACCAAGATCTTCGTATCGAAGTAGAGTGT ATTTCCCTTGAAGCCACGAAGGAGCTGTAATGGCATATTTTATGTTAATG AGCATACCACGACAAAGTTTTTTGGAGTATTCTCTTAAATGATCCGTACT GTTTACCATTCGTGAGATGTTAGGGTTGGTTAGTAAGTGAGTGTAAACAA TGGCGCGCGGATCACGCACTAAGTGCACAACCTTCAATGAATAATCACTA CTATCTTTGTCCATTAAATATGATAATTTATGCACTTCAGAGAATTGAAT ACTTTTGACGACTGTATGTTGGTGAAGTTTGCATATTGCAGACGTTGTTT GTGGTTTCAATGGTGTACACATTCGGATAGTGTAAAATGAACGGGAATTA GTTTCCGGACAAAGCGGAGGTGCGGAAAGAGCCCGGCTTGCGAGACGACT TTTCAGAGAGCTGTATTGAAAAGACATAAAGTTCGTATAATATGAGAGCT CATCAAATTTACATTGGAAAGTTCCATCGAGCTGTTGAGTAACCATGGAG TCATAAACATCTGATGGACGATTCTCTTTATAATAATCAAGAGCTTTCAA AGGTTCGTACAGATAAAAAACTTGTGGATTTTGATTGAACATTTCACCTA GCAATGCACTTCCGCAATACTGATTGGATAAAATCAAGATATTTTGACGC ATTTTCGAGCCATGCTGGTTCATCCAAGAATTGAATTCCAACAACTTATT TAATCGTTCATACATCAAAACCTTCTGACGTAACTCTTCCAGCTCGCCTT GAGGCTTGTTATCCGTCTTCAATTCCTCTTCTTGCATCTGGCTTAACGAA GTCGCACATTTTGGCTTTCCATCGTCAGTGTCCTCAATCACGACTTTGTA TCTTTGGTCAGCATAATATAAGTTCAGAATCAATAAATATAATATCGCGA GGAGGAGGACTAGCCATAAGATTTGATCACGAGTTCGACGAATAACTGAT ACCAACTTCTCCTCGAACATTTCCAACGGTCTATTCCATCAACTTGTCAA ATATTATAACAAAATTGCCATTAGATACCATTCGAGTTTATCAAAAGGTA ATCTAaataaattcaatcaaatttaaCGAGGATTTTATTGCCTTTTAATT Gcttctttaaattttcttctctttataaagtttatacaagcaataaaaac aaaacgaaGATGAGCCGATTGTTTTGGTtgtttcgaacgttcgaacaaAA AACAAATTGTCTCGAACAATTCTCAGATAAGGAAGCCTCATTTGTCTACA TTTGTTAGCAGAGACGAACTAACCAGCCAtgtaatttgaaaattgaaaac taattttcggAAATTGAGAATTACTTTTTGTTTATGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006377TCONS_00006377Clytia hemisphaericatranscript
TCONS_00006378TCONS_00006378Clytia hemisphaericatranscript
TCONS_00006379TCONS_00006379Clytia hemisphaericatranscript
TCONS_00006380TCONS_00006380Clytia hemisphaericatranscript
TCONS_00006381TCONS_00006381Clytia hemisphaericatranscript
TCONS_00006382TCONS_00006382Clytia hemisphaericatranscript
TCONS_00006383TCONS_00006383Clytia hemisphaericatranscript
TCONS_00006384TCONS_00006384Clytia hemisphaericatranscript
TCONS_00006385TCONS_00006385Clytia hemisphaericatranscript
TCONS_00006386TCONS_00006386Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006378-proteinTCONS_00006378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:99153..106489 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HSPA1Bheat shock 70 kDa protein 1A/1B Homo Sapiens
HSPA6heat shock 70 kDa protein 6 Homo Sapiens
HSPA2heat shock-related 70 kDa protein 2 Homo Sapiens
HSPA1Aheat shock 70 kDa protein 1A/1B Homo Sapiens
HSPA1Lheat shock 70 kDa protein 1-like Homo Sapiens
HSPA8heat shock cognate 71 kDa protein isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53 0.76 0.23 0.21 0.26 0.3 3.27 3.61 81.15 18.72 305.32 1075.98 3.55 3.67 18.89 4.24 3.02 2.9 184.23 135.08 39.32 265.62 2.17 1.89 2.49 2.46 22.19 94.53 15.46 5.1