TCONS_00005943 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00005943
Unique Name	TCONS_00005943
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1693

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000061:806162..814608-

transcript sequence

>TCONS_00005943 ID=TCONS_00005943|Name=TCONS_00005943|organism=Clytia hemisphaerica|type=transcript|length=1693bp
GGTGAACTGCACCCTAATTCAATTAGATTAAATTACTTttaacaaaacat
tcaaaatacaaaaagaactTATATGTAGgacaattatattttttattgca
tcGCAAATGACTTGTATTTATATTCCCTAGGCAATTATCGTAGGCAATTA
TCGCTAGatattatatcaattttttacaatttcaatTCAACTCAATCATT
CAATTCTGAAACTTACACAAGAAGGATGTACGTGGAAGATGTTGAGATGC
GTTTTTAGATACAAGTTTTAGAGTTCAATTTCAAGTtcaatcttttatca
atcatttCATGTACCTGTATTCACTTgccttcaaatttggcatgtggcTA
TCCGtttgaacataatcAACCAGTTACAAACGGAAGCTGACTCCAATCTT
TGCTCAAATTCCCCAACACTCATTTCGCTGAGATTTGTTCCATGTTAGTT
CCATTATATATTTAATATATATCAtgccgtagcatgaaggtacaGCATAA
AGGTGCAGCATCTAGCTACGATGTGTAACAAAGTTAATAGTTCAAGCCCC
AGTTGTATAAAAGTTTGTTGAAAAAGATCGCTTAATAAAAATAGTTATGA
CTTTATTAGTAAACATAATAAATGAAGGCTTTGCACTCTGTAACTCGATG
TTGATTTGGTTGTTGAAGTTgaaagaaaatcatcatttgTTGATTTGAAG
CATTTGAAAGTCTTCATTAAAGCTCGCCGGACTGGTCGATTCAACACTAC
ATAAATGATGGGATCTGTGACAGAGTTTAATATTCCCAAAGAGAGTAGAG
ATCCAGTCAGCTCAGGGTTTGGTGCAGTTGGAATTTTACCTGTGTATCGT
CCTTGAATGAATTCGGTAATCGTCAAGATGCAAGTTGGTAACCAGAGGAT
GACAAATGTTAACGTAAACATCATAGACACCAGGACTGATTTTTGGagtt
tctttttaaagatttgtgcCGGATTCTGCTGTTTCTTATTCAATGGTTGT
CCATCATCTTTGGTGGTGTTGGTACATTGGATATGTGTGGAAACTGTTAA
ATGGTGGATCTGTTTGAGTTGCTTATGTACATCTAAGAATATGGCAATAT
TACCAGCAATCAGGATGAATCCAGTGGAAAAGTAACTGAATGAACAGATC
GTTGCCGATTTCTCGAAATCCACCAACAGCAGTGCAAGCAAGTACAATGC
TGGAAATATGAGAGCAGCCGGTAGGATCTTGTAAGCTTTTCCTTTGGTGA
AATTTTGGTATACAAACGGTTTTTTAACAGCCATCATACGGTCAATTAAC
AACATGATGAGTAGGCTAAAATTGATAGCGATTACTACACGGAAATATAT
ACCAGCAAAATCGTTAAACAGGACGACCTGTTGGTATGTTGCATCGATGA
TAACTAGCCCAGGGGTTTGTGCGAAACTACCTATCCCAATAAACCAATGA
GTGCATATAAATGGTACCAAGAATACTATGGTTATTTGTTTCTTTCCACA
ACGTGATTTCCAGAATCCAAACAGCAGACAGGAGTTGGTGATCAAGATGG
TTATGGAGATGATAGATCCAAGAATGATAGCACCAATTGAAAGAATGTCA
GTTAATACTGGTGGCTCGCTACCAGTGTTATTCATGCTGATAGATTTTTA
TCAGTAAACAACAACGAAATTATGTTCAACACGTTATTTGAAA

Run BLAST on NCBI

transcript from alignment at sc0000061:806162..814608-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00005943 ID=TCONS_00005943|Name=TCONS_00005943|organism=Clytia hemisphaerica|type=transcript|length=8447bp|location=Sequence derived from alignment at sc0000061:806162..814608- (Clytia hemisphaerica)
GGTGAACTGCACCCTAATTCAATTAGATTAAATTACTTTTAACAAAACAT
TCAAAATACAAAAAGAACTTATATGTAGGACAATTATATTTTTTATTGCA
TCGCAAATGACTTGTATTTATATTCCCTAGGCAATTATCGTAGGCAATTA
TCGCTAGATATTATATCAATTTTTTACAATTTCAATTCAACTCAATCATT
CAATTCTGAAACTTACACAAGAAGGATGTACGTGGAAGATGTTGAGATGC
GTTTTTAGATACAAGTTTTAGAGTTCAATTTCAAGTTCAATCTTTTATCA
ATCATTTCATGTACCTGTATTCACTTGCCTTCAAATTTGGCATGTGGCTA
TCCGGTACGTTTGCCTCTTTGTTTGCCTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAGGTCTGGACATTAGGCTAGGTCATTTTTAGGCATGTTTTTTG
TTAGTCAAATTTAAGTTCATTTATTGCATTCAATTATTGTCAATAATAAA
TTTTCTCTAGTTTATTTTCTAATTGTATTTTTTTTCAATCAATTTTTCAG
TTTGAACATAATCAACCAGTTACAAACGGAAGCTGACTCCAATCTTTGCT
CAAATTCCCCAACATTCAAACGGAGTCCTACGTCATTCAACGGGAACCCG
CCCATTCAATTTCAAACACACGGAATCGTTCATCAATCCAAGCGAACATC
CGTCTTATCAATCGGTGATCCATTCAGTCAATTTGGTGATCCACTCAACA
ACGTCCACTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCCGAAGTCACACCCAAAGATGACGACACAATCGAGGCCACGCC
CAAGGATGACATGCCTGAGGAACTGAAAACGATACCTCAAGATACCACTC
AACTCGAAATCGATATCATGGTTGCAATCGAGGATATTGATGACTTGATT
GACGAGAATGCATCCTTTGATGACGTCACTACCTCGAAGCTCGAGCAACA
TCGAACCAATCTTCGACGATTACGAAATATCCTCATGAGAAATCATCCAC
ATTCTGACCTGCTTTCCGAGATCAAAGTCACCTTGGATGTAAAAATCAAA
TCCTATATCAAATCAAACAAAGGCGTGAACAACAACACCAAAATCTTGCA
AGACAAAATGAAGCAAGACGAAATCCAACGAAAACAAAGATCAATCGAGT
TCCTCGTCAACAACATTAATCGAGATCTGAAGGAACTTACAGAACAATNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTGAGATTAGCACAAGAACACAACATTGAAGAGTACC
TATACTATGGTGAAGGACTCAACACCATCTACCAGCTGATCGGTGATGTA
CAAACAACGAAATTCCTGGACACCATCTGTACCGACGACCTCGAGCAACA
AGAAATCTGGTCAAAACTCATATCCTTCCTGGAGGTGTCACAACACAATC
AACACATGGAATCTATACCTTCTCGTTACCACTGGCAACCAACAATGGTG
CAGAGATGACTGGAGTTTGTCTCGACACACTCACTGCGACCTTTTCCTTC
TATCCATTGCAAGGAAAAGTGGAGAACGACATTCAGCACAGTTGGGAGGA
CTCTGGCCACGACATCAATCATCTTCCAAGACTACCACCAATGGTTGGAG
GAGACGTCGACGTGATGATAGGTATACGTTATCTTCGTTTCTTTCCTAAA
TTCATCCACCAGTTACCTTCTGGCTTGACCATCTACCAATCACAATTCAA
GAACATCGATGGATCTTATGGGGTGATCGGTGGTCCCCATGAGGTATTCA
CAAGTATCGAAAATCATCATCACTCAACTTNAGACATTCGATTACTTGGA
TCAGCTACCTTCAGTGAGGTTCGACATGACTTGTATTTCACTAACAACCC
AACTTACCAAATCAACAACGACGAATCTGAACCATCAACTTCATACATCA
CCAATCTTAATGAGAAGTTCGAATCAGTTGGTACAGACCTTAACTATCGC
TGTGTCAATTGTCGAAAGTGTTTAACCTGTAAGAACCATTCTACAGAAGA
TTCCATTAGCATCCAAGAGGAGGTCGAGCAAGACTTGATTAATCGCTCCA
TCACTATCGACCCATCCAATTGTTCATCGATTGCTAATCTTCCACTAATA
CACGACCCTCTGGTCAAACTGGCACCAAATCGAGACATTGCACTTCGCGT
TTACATACAACAGCTTAAACGTTTGGAAAAGCATCAAGACGATAAGGACG
GCATCCTCATCTCAGAGAAGAAACTGCAACACCTGGGATTCGTCGAATAT
GTCAAGAATTTGCCCACTGACATCCAAAAGCAACTATGTCGGTGTTTTTT
ACACTTTTGGCAAAAACGTGAAGTTTTTTTAAACAGGTTTTAAAATAAAT
ACAAAATGCATGGGAAGGCTACACAACGAATGCTAGATCTTCAATCGACA
TCATTCTGTGTCCCAATCTTGGAGAAGTCATCACCAATCGCCTACAGCAT
CGTCAACGACATCCATTGGAACCACATCACTGCTTCACATTCTGGTGTGG
AGACCACTTGGAGATATGTTCTTCAGAAAGTTTTCATCATCGAAGGAAGG
AGTCTGGTCAAGTCAATTCGATCAAATTGTGAAAGGTGTCGATACCTTCT
CAAGAAAACCATCGACGTATCAACGGGACCAGTATCACCTGACAACCTGA
TGATTGCTCCAATCTTCTACGTATCTCAAGTCGATTTGTGTGGTCCATTT
GAATCATACTCGTATCACAACAAGAGGGCCACTGTCAAGATCTGGTACGC
CGTCTTCTGCTGTGCTACTACCACCACCATCAGCATCAAATGCATGGAGG
ATTACTCGACAAACGCATTCCTACAAGCATTCACTCGACTATCGTGCGAA
GTTGGGTATCCACGTCGACTGCTCACTGATGAGGGCAGCCAACTCGNCAC
CATCAGCATCAAATGCATGGAGGATTACTCGACAAACGCATTCCTACAAG
CATTCACTCGACTATCGTGCGAAGTTGGGTATCCACGTCGACTGCTCACT
GATGAGGGCAGTCAACTCGTCAAGGCTTGCGAAACACTTCAAATTGATTT
CCAAGACATCCAACGTCGTCTCTTCAAAGAATCCAATGTCGATTTCAACA
CTTGTCCAGTTGGAGGCCACAATATGAATGGTCTCGTAGAACGAAAAATT
CGTGAAGTCAAGAAGTCCATCCAAAAATCAGTCTCCAATCAACGACTATC
AATCATGCAATGGGAGACATTCGCATCTCGAGCAGCAAACAGCATCAATG
ATCTACCATTAGGCATTCGTGACTACGATGGAGACTTGCAATCATTGGAT
ATCATCACACCAAATAGACTGAGACTTGGACGAAACAACGACAGAAGCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAATAAATAATTCGAAAGT
TACTGAAGTACGGCGCATTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAA
GGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAACTCAATGAGTCCATC
TGCAAGTGTAAGGGGGAAATATTTAGTCGCATTTGTGCGAATCTTGTTTA
CAATTTCAATTCAACTCAATCATTCAATTCTGAAACTTACACAAGAAGGA
TGTATGTGGAAGATGTCGAGATGCGTTTTTAGATACAAGTTTTAGAGTTC
AATTTCAAGTTCAATCTTTTATCAATCATTTCATGTACCTGTATTCACTT
GCCTTCAAATTTGGCATGTGGCTATCCGGTACGTTTGCCTCTTTGTTTGC
CTTTGTGCCTTTCTTTGTTTGCCTTTGTACCTTTCTTGTTTGCCTCTTGT
GCCTTTTTTGTTTGCCTTTGTGTCTTTCTTGTTTGCTTTTTGTGCCTCCT
TTTCATGCACATTTAGGTTGGGTCCGGTTTAGGTCTGGACATTAGGCTAG
GTCATTTTTAGGCATGTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCATTCAATTATTG
TCAATAATCAATTTCTCTAGTTTATTTTCTAATTGTAATTTTTCAATCAA
TTTTTCAGTTTGAACATAATCAACCAGTTACAAACGGAAGCTGACTCCAA
TCTTTGCTCAAATTCCCCAACACTCATTTCGCTGAGATTTGTTCCATGTT
AGTTCCATTATATATTTAATATATATCATGCCGTAGCATGAAGGTACAGC
ATAAAGGTGCAGCATCTAGCTACGATGTGTAACAAAGTTAATAGTTCAAG
CCCCAGTTGTATAAAAGTTTGTTGAAAAAGATCGCTTAATAAAAATAGTT
ATGACTTTATTAGTAAACATAATAAATGAAGGCTTTGCACTCTGTAACTC
GATGTTGATTTGGTTGTTGAAGTTGAAAGAAAATCATCATTTGTTGATTT
GAAGCATTTGAAAGTCTTCATTAAAGCTCGCCGGACTGGTCGATTCAACA
CTACATAAATGATGGGATCTGTGACAGAGTTTAATATTCCCAAAGAGAGT
AGAGATCCAGTCAGCTCAGGGTTTGGTGCAGTTGGAATTTTACCTGTGTA
TCGTCCTTGAATGAATTCGGTAATCGTCAAGATGCAAGTTGGTAACCAGA
GGATGACAAATGTTAACGTAAACATCATAGACACCAGGACTGATTTTTGG
AGTTTCTTTTTAAAGATTTGTGCCGGATTCTGCTGTTTCTTATTCAATGG
TTGTCCATCATCTTTGGTGGTGTTGGTACATTGGATATGTGTGGAAACTG
TTAAATGGTGGATCTGTTTGAGTTGCTTATGTACATCTAAGAATATGGCA
ATATTACCAGCAATCAGGATGAATCCAGTGGAAAAGTAACTGAATGAACA
GATCGTTGCCGATTTCTCGAAATCCACCAACAGCAGTGCAAGCAAGTACA
ATGCTGGAAATATGAGAGCAGCCGGTAGGATCTTGTAAGCTTTTCCTTTG
GTGAAATTTTGGTATACAAACGGTTTTTTAACAGCCATCATACGGTCAAT
TAACAACATGATGAGTAGGCTAAAATTGATAGCGATTACTACACGGAAAT
ATATACCAGCAAAATCGTTAAACAGGACGACCTGTTGGTATGTTGCATCG
ATGATAACTAGCCCAGGGGTTTGTGCGAAACTACCTATCCCAATAAACCA
ATGAGTGCATATAAATGGTACCAAGAATACTATGGTTATTTGTTTCTTTC
CACAACGTGATTTCCAGAATCCAAACAGCAGACAGGAGTTGGTGATCAAG
ATGGTTATGGAGATGATAGATCCAAGAATGATAGCACCAATTGAAAGAAT
GTCAGTTAATACTGGTGGCTCGCTACCAGTGTTATTCATGCTGATAGATT
TTTATCAGTAAACAACAACGAAATTATGTTCAACACGTTATTTGAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003379	XLOC_003379	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00005943-exon-sc0000061-1575043694:814255..814608	TCONS_00005943-exon-sc0000061-1575043694:814255..814608	Clytia hemisphaerica	exon
TCONS_00005943-exon-sc0000061-1575043694:806162..807500	TCONS_00005943-exon-sc0000061-1575043694:806162..807500	Clytia hemisphaerica	exon
TCONS_00005943-exon-sc0000061-1510915933:814255..814608	TCONS_00005943-exon-sc0000061-1510915933:814255..814608	Clytia hemisphaerica	exon
TCONS_00005943-exon-sc0000061-1510915933:806162..807500	TCONS_00005943-exon-sc0000061-1510915933:806162..807500	Clytia hemisphaerica	exon
TCONS_00005943-exon-sc0000061-1491911889:814255..814608	TCONS_00005943-exon-sc0000061-1491911889:814255..814608	Clytia hemisphaerica	exon
TCONS_00005943-exon-sc0000061-1491911889:806162..807500	TCONS_00005943-exon-sc0000061-1491911889:806162..807500	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000061	supercontig	sc0000061:806162..814608 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0302179	0	0.0342142	0.0331403	0	0	0.034484	0.0989939	0.123929	0.328773	0.169546	0.0953597	1.68412	1.46982	0.460252	0.49201	0.0234859	0.10862	3.98923	4.30813	0.0907458	0.354101	0.143485	0.326122	0.385016	0.183263	0.0395264	0.0392058	0.0347245	0.0327145

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00005943 vs. Swiss-Prot (Human)

BLAST of TCONS_00005943 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00005943 (transcript) - C. hemisphaerica