TCONS_00005895 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005895
Unique NameTCONS_00005895
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2718

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005895 ID=TCONS_00005895|Name=TCONS_00005895|organism=Clytia hemisphaerica|type=transcript|length=2718bp
ATTCACAAAAATCCATCACATACCTCCCATCATCCAAAACTAACCCATCT
CTATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGATGAAGAAAAG
CTTTATGAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCACCCA
TTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGCTTTA
AAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAGATGT
GAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGATGATG
AAGACActaaagtgattaacatccagccttcaaataaatcaaaacgCTCN
ATGTAAAATAGAGTTACTGGCTAACACTCCTAGTAATGCTACCAACTTGT
TGAAAATTCATTTAATGGTGGAGCATAGGTACCAAAAGAAACGATCAGTT
ATAGAAGCTTTAAAACAAGAACGCATCATAATCTGCAAACGAAAACATCA
CGGTGAACATATCATAATGCCATGTGAAGAATGTAGAATTTGGTTATGCT
GGGATTCCCTTATCGACCACCTTCAGTTAAAGAAACATAACATGGATCGA
TTAGGTGCCATTGATTTCATGAtcacattaaaaaagaaaatttggggTCA
AAATGCTCCTAAAGCCAGAGACTTAGACGATTTTGGACGGCGTCTCCCAG
CTGTGAATGAACAAAGTTCGTGTAAAGACAGCCAAAGAGCAGATATTTCC
ACGAATAATGCCCAGAAAGATTCTAATTCACAAAAATCCATCACATACCT
CCCATCATCCAAAACTAACCCATCTCTATCTACACCTTCTATCGCTAGCA
AACCAATTGTGGCGATGAAGAAAAGCTTTATGAGCGACGCTTTAAGTTCA
CTCAAAAGTACTGGGTGCCCACCTATTAATAGTGCTTATACTACAATCAA
CCCTACGCTTTTGAGAGAAGCTTTAAAGGATGATAAAGCACAATATGAGA
AAGACTTTTCATTAACGAAAGATGTGAAAAGCAATGTCGGTGAAAAACGA
AAATCGATTGTTATTGACGATGATGAAGACActaaagtgattaacatcca
gccttcaaataaatcaaaacgCTCTGAGCCTTCAAAGAGTAATTCCCAAA
CACTCGAGAACAATAGTCTATCTACAGACTACAAAATTTCAGCTCCTGCT
GTTGATGCTGAATATGAGAGGGAGAAAAACATTAGCAATAAAGAAAGAAT
TGATAATAAAGCTAGTCTCCGTGTGGTTATAACTGATGTAAAAGAAGTTA
ATATACAAAAAGTTAAGGTGGCTGCAAGTTGCCCTGTATGTGGAAgagaa
tttaaaatgaaacaaatgaaactaATTAGCCATCATTTGGTAAGAAAACA
TGGTTTTAAGGTACGACAAGCTCTTATGGAGGAGGTCAAGCAGACACGAT
TGGCTAAGTGTATGAAACAGCACGGAGGAAAACATATTCTTCTGCCATGC
GCAGTCGATCAATGCGACATGTGGTTTTGTAGCGATATGAGTTTTGAACA
ACATATGAGGATGAAACATTGTATGTCTATGCCTGATGTTTATAAAGCGA
GAGACGAGTTAATTAAAAAACATTGGGATGGTAAAAAAGTACTCGTCAAA
GAGATCTTATCAGGAATTAGTACCAACAATAAAAGTACATTAAATTCTAA
CGCCAAATCCAGTATGGAAGATTCAATGATATCTAAATCCAACACTGAAA
TCAGTACGCGAAGACCTACTGAAAAGACAACAAATACATCCAAGTCTTCA
TCTTCAACCAGTGCCGGTGAAGAAATAACTACTGAAGTTACAAGGACATC
TAAGTCTAACGCTGGAATGAGTGAACACATCACCACGGAACATACAAAGA
CATCTAAATGTAACACTGGAAACATTATCACGGATTCTttcatgaaagaa
aaaacacaaattgagaaaaaaaaataacactGATGCTAAGCAGGAACAAC
ATTCAACTCAAAAACCAACAGTTTATGGAGGAAAAGCAAACCCTATCACT
ATTGATATTGatttaattgaaaatgaaaCTCTCTCTCGAAATAAAATGAA
gtcaaaaaccaaagaaaatatcAAGGACATCGAAAATAAGGAATTATTTG
TGCTCAAAACTCCGTCTAACTCAGTTGCTACGGAAATTAAACTCGATATA
TTTACGAAAACAACAAGCGAAGATCTTTCAAAATTGTCTGCGCCTTCTTT
CGAAGCTGAGAAAGAAGTTGGTAAAGGTAATAAAGGTTTTGTACTAAACA
CTAATGATGAAAGTGCTAGCATTATATCTAAGTCGTTCGTTGGATCAGAA
GCTTTGGAAACGGAATGTGATAGAAATTCTACCACGGATGTAAAAGAGAG
TTTTCTGGAGACTGTGATCGCGGAGGAAAAAGAACTAAAATCGAGCACAC
GGGAAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGACGCTTTA
TTTGGGATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAACGTGACGGAGA
TATCATTATGGTTAATCAGAGTCGTCAAGAAATACCGGAGCCTTCGATTA
AAGAAGAGGGAGAAACAAGTGTCACCAATCTCTCGTGTAAAGACTCGTTT
AAAGTTACAACGCAACCTTGTCAAACGCTGGAGGAATTGGTTCAAGATAT
TCAAAACATCACAACAAA
Run BLAST on NCBI

protein sequence of TCONS_00005895-protein

>TCONS_00005895-protein ID=TCONS_00005895-protein|Name=TCONS_00005895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MVEHRYQKKRSVIEALKQERIIICKRKHHGEHIIMPCEECRIWLCWDSLI
DHLQLKKHNMDRLGAIDFMITLKKKIWGQNAPKARDLDDFGRRLPAVNEQ
SSCKDSQRADISTNNAQKDSNSQKSITYLPSSKTNPSLSTPSIASKPIVA
MKKSFMSDALSSLKSTGCPPINSAYTTINPTLLREALKDDKAQYEKDFSL
TKDVKSNVGEKRKSIVIDDDEDTKVINIQPSNKSKRSEPSKSNSQTLENN
SLSTDYKISAPAVDAEYEREKNISNKERIDNKASLRVVITDVKEVNIQKV
KVAASCPVCGREFKMKQMKLISHHLVRKHGFKVRQALMEEVKQTRLAKCM
KQHGGKHILLPCAVDQCDMWFCSDMSFEQHMRMKHCMSMPDVYKARDELI
KKHWDGKKVLVKEILSGISTNNKSTLNSNAKSSMEDSMISKSNTEISTRR
PTEKTTNTSKSSSSTSAGEEITTEVTRTSKSNAGMSEHITTEHTKTSKCN
TGNIITDSFMKEKTQIEKKK
Run BLAST on NCBI

transcript from alignment at sc0000061:186471..190080-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005895 ID=TCONS_00005895|Name=TCONS_00005895|organism=Clytia hemisphaerica|type=transcript|length=3610bp|location=Sequence derived from alignment at sc0000061:186471..190080- (Clytia hemisphaerica)
ATTCACAAAAATCCATCACATACCTCCCATCATCCAAAACTAACCCATCT
CTATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGATGAAGAAAAG
CTTTATGAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCACCCA
TTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGCTTTA
AAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAGATGT
GAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGATGATG
AAGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCAAAACGCTCN
ATGTAAAATAGAGTTACTGGCTAACACTCCTAGTAATGCTACCAACTTGT
TGAAAATTCATTTAATGGTGGAGCATAGGTAGGTAGTAATACCAACGTTT
TAGTATGATTTAAATTTATCTCGAAATACTTTGATTTGTGCATGATTTTC
TTTTTCTCCAGTCCATAGTTGCGCCTCTTCGATTAGGAAATACTTACGCA
AATTATTGAAAAATTNGAACAATAGTCTATCTACAGACTACAAAATTTCA
GCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAACAGTAGCAATAA
AGCAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTATAACTGATGTAA
AAGAAGTTAATATGCAAAAAGTTAAGGTGGCTGNTCAGATTTGTAGAACG
GCACCTGGAGTGTTTATTTTCTCGCTGATTTTCTCGCTAAGAAGAAGAAT
TATTAATGCATTTAATGATTAAACAGAAAAACGGTTTTTATTCTTAATGG
AAGAGAATAATTCATTTGTCCTTCTTTCAATGTTCAGGTACCAAAAGAAA
CGATCAGTTATAGAAGCTTTAAAACAAGAACGCATCATAATCTGCAAACG
AAAACATCACGGTGAACATATCATAATGCCATGTGAAGAATGTAGAATTT
GGTTATGCTGGGATTCCCTTATCGACCACCTTCAGTTAAAGAAACATAAC
ATGGATCGATTAGGTGCCATTGATTTCATGATCACATTAAAAAAGAAAAT
TTGGGGTCAAAATGCTCCTAAAGCCAGAGACTTAGACGATTTTGGACGGC
GTCTCCCAGCTGTGAATGAACAAAGTTCGTGTAAAGACAGCCAAAGAGCA
GATATTTCCACGAATAATGCCCAGAAAGATTCTAATTCACAAAAATCCAT
CACATACCTCCCATCATCCAAAACTAACCCATCTCTATCTACACCTTCTA
TCGCTAGCAAACCAATTGTGGCGATGAAGAAAAGCTTTATGAGCGACGCT
TTAAGTTCACTCAAAAGTACTGGGTGCCCACCTATTAATAGTGCTTATAC
TACAATCAACCCTACGCTTTTGAGAGAAGCTTTAAAGGATGATAAAGCAC
AATATGAGAAAGACTTTTCATTAACGAAAGATGTGAAAAGCAATGTCGGT
GAAAAACGAAAATCGATTGTTATTGACGATGATGAAGACACTAAAGTGAT
TAACATCCAGCCTTCAAATAAATCAAAACGCTCTGAGCCTTCAAAGAGTA
ATTCCCAAACACTCGAGAACAATAGTCTATCTACAGACTACAAAATTTCA
GCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAACATTAGCAATAA
AGAAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTATAACTGATGTAA
AAGAAGTTAATATACAAAAAGTTAAGGTGGCTGCAAGTTGCCCTGTATGT
GGAAGAGAATTTAAAATGAAACAAATGAAACTAATTAGCCATCATTTGGT
AAGAAAACATGGTTTTAAGGTACGACAAGCTCTTATGGAGGAGGTNAATT
TAAAATGAAACAAATGAAACTAATTAGCCATCATTTGGTAAGAAAACATG
GTTTTAAGTTACGACAAGCTCTTATGGAGGAGGTCAAGCAGACACGATTG
GCTAAGTGTATGAAACAGCACGGAGGAAAACATATTCTTCTGCCATGCGC
AGTCGATCAATGCGACATGTGGTTTTGTAGCGATATGAGTTTTGAACAAC
ATATGAGGATGAAACATTGTATGTCTATGCCTGATGTTTATAAAGCGAGA
GACGAGTTAATTAAAAAACATTGGGATGGTAAAAAAGTACTCGTCAAAGA
GATCTTATCAGGAATTAGTACCAACAATAAAAGTACATTAAATTCTAACG
CCAAATCCAGTATGGAAGATTCAATGATATCTAAATCCAACACTGAAATC
AGTACGCGAAGACCTACTGAAAAGACAACAAATACATCCAAGTCTTCATC
TTCAACCAGTGCCGGTGAAGAAATAACTACTGAAGTTACAAGGACATCTA
AGTCTAACGCTGGAATGAGTGAACACATCACCACGGAACATACAAAGACA
TCTAAATGTAACACTGGAAACATTATCACGGATTCTTTCATGAAAGAAAA
AACACAAATTGAGAAAAAAAAATAACACTGATGCTAAGCAGGAACAACAT
TCAACTCAAAAACCAACAGTTTATGGAGGAAAAGCAAACCCTATCACTAT
TGATATTGATTTAATTGAAAATGAAACTCTCTCTCGAAATAAAATGAAGT
CAAAAACCAAAGAAAATATCAAGGACATCGAAAATAAGGAATTATTTGTG
CTCAAAACTCCGTCTAACTCAGTTGCTACGGAAATTAAACTCGATATATT
TACGAAAACAACAAGCGAAGATCTTTCAAAATTGTCTGCGCCTTCTTTCG
AAGCTGAGAAAGAAGTTGGTAAAGGTAATAAAGGTTTTGTACTAAACACT
AATGATGAAAGTGCTAGCATTATATCTAAGTCGTTCGTTGGATCAGAAGC
TTTGGAAACGGAATGTGATAGAAATTCTACCACGGATGTAAAAGAGAGTT
TTCTGGAGACTGTGATCGCGGAGGAAAAAGAACTAAAATCGAGCACACGG
GAAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGACGCTTTATT
TGGGATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAACGTGACGGAGATA
TCATTATGGTTAATCAGAGTCGTCAAGAAATACCGGAGCCTTCGATTAAA
GAAGAGGGAGAAACAAGTGTCACCAATCTCTCGTGTAAAGACTCGTTTAA
AGTTACAACGCAACCTTGTCAAACGCTGGAGGTATATAAAACTATTTACT
TGTTAGAAGAGATCCTCTTTACAATGTCCCATTGATCGATATTGTTTTCT
ATTTACTACCTGGGTAGGTTTAAAGAATATTTGTTTATGTTTTTAACAAT
CAGCATCAATCGCGATCGACTTCTGATATTGAGTGAAGGCTGATAAGGAA
GTAGAAAATGTAACGAGATTTCTAATTTTGTCATTGCTTTCAAATTGGCG
GATGGCTTTTGTTTCTGGGTCTTACATGGAAACAAAGTTCTACCTTTCAA
TAAGAAGAGATTTGTCAAAACTCATTCAAGAACTCATTTTCTTTACTTAA
GTAAATAAATTACCTTTTTACTCAGGAATTGGTTCAAGATATTCAAAACA
TCACAACAAA

Coding sequence (CDS) from alignment at sc0000061:186471..190080-

>TCONS_00005895 ID=TCONS_00005895|Name=TCONS_00005895|organism=Clytia hemisphaerica|type=CDS|length=4689bp|location=Sequence derived from alignment at sc0000061:186471..190080- (Clytia hemisphaerica)
GTCAAGCAGACACGATTGGCTAAGTGTATGAAACAGCACGGAGGAAAACA
TATTCTTCTGCCATGCGCAGTCGATCAATGCGACATGTGGTTTTGTAGCG
ATATGAGTTTTGAACAACATATGAGGATGAAACATTGTATGTCTATGCCT
GATGTTTATAAAGCGAGAGACGAGTTAATTAAAAAACATTGGGATGGTAA
AAAAGTACTCGTCAAAGAGATCTTATCAGGAATTAGTACCAACAATAAAA
GTACATTAAATTCTAACGCCAAATCCAGTATGGAAGATTCAATGATATCT
AAATCCAACACTGAAATCAGTACGCGAAGACCTACTGAAAAGACAACAAA
TACATCCAAGTCTTCATCTTCAACCAGTGCCGGTGAAGAAATAACTACTG
AAGTTACAAGGACATCTAAGTCTAACGCTGGAATGAGTGAACACATCACC
ACGGAACATACAAAGACATCTAAATGTAACACTGGAAACATTATCACGGA
TTCTTTCATGAAAGAAAAAACACAAATTGAGAAAAAAAAATAAGTACCAA
AAGAAACGATCAGTTATAGAAGCTTTAAAACAAGAACGCATCATAATCTG
CAAACGAAAACATCACGGTGAACATATCATAATGCCATGTGAAGAATGTA
GAATTTGGTTATGCTGGGATTCCCTTATCGACCACCTTCAGTTAAAGAAA
CATAACATGGATCGATTAGGTGCCATTGATTTCATGATCACATTAAAAAA
GAAAATTTGGGGTCAAAATGCTCCTAAAGCCAGAGACTTAGACGATTTTG
GACGGCGTCTCCCAGCTGTGAATGAACAAAGTTCGTGTAAAGACAGCCAA
AGAGCAGATATTTCCACGAATAATGCCCAGAAAGATTCTAATTCACAAAA
ATCCATCACATACCTCCCATCATCCAAAACTAACCCATCTCTATCTACAC
CTTCTATCGCTAGCAAACCAATTGTGGCGATGAAGAAAAGCTTTATGAGC
GACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCACCTATTAATAGTGC
TTATACTACAATCAACCCTACGCTTTTGAGAGAAGCTTTAAAGGATGATA
AAGCACAATATGAGAAAGACTTTTCATTAACGAAAGATGTGAAAAGCAAT
GTCGGTGAAAAACGAAAATCGATTGTTATTGACGATGATGAAGACACTAA
AGTGATTAACATCCAGCCTTCAAATAAATCAAAACGCTCTGAGCCTTCAA
AGAGTAATTCCCAAACACTCGAGAACAATAGTCTATCTACAGACTACAAA
ATTTCAGCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAACATTAG
CAATAAAGAAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTATAACTG
ATGTAAAAGAAGTTAATATACAAAAAGTTAAGGTGGCTGCAAGTTGCCCT
GTATGTGGAAGAGAATTTAAAATGAAACAAATGAAACTAATTAGCCATCA
TTTGGTAAGAAAACATGGTTTTAAGGTACGACAAGCTCTTATGGAGGAGA
TGGTGGAGCATAGGTCAAGCAGACACGATTGGCTAAGTGTATGAAACAGC
ACGGAGGAAAACATATTCTTCTGCCATGCGCAGTCGATCAATGCGACATG
TGGTTTTGTAGCGATATGAGTTTTGAACAACATATGAGGATGAAACATTG
TATGTCTATGCCTGATGTTTATAAAGCGAGAGACGAGTTAATTAAAAAAC
ATTGGGATGGTAAAAAAGTACTCGTCAAAGAGATCTTATCAGGAATTAGT
ACCAACAATAAAAGTACATTAAATTCTAACGCCAAATCCAGTATGGAAGA
TTCAATGATATCTAAATCCAACACTGAAATCAGTACGCGAAGACCTACTG
AAAAGACAACAAATACATCCAAGTCTTCATCTTCAACCAGTGCCGGTGAA
GAAATAACTACTGAAGTTACAAGGACATCTAAGTCTAACGCTGGAATGAG
TGAACACATCACCACGGAACATACAAAGACATCTAAATGTAACACTGGAA
ACATTATCACGGATTCTTTCATGAAAGAAAAAACACAAATTGAGAAAAAA
AAATAAGTACCAAAAGAAACGATCAGTTATAGAAGCTTTAAAACAAGAAC
GCATCATAATCTGCAAACGAAAACATCACGGTGAACATATCATAATGCCA
TGTGAAGAATGTAGAATTTGGTTATGCTGGGATTCCCTTATCGACCACCT
TCAGTTAAAGAAACATAACATGGATCGATTAGGTGCCATTGATTTCATGA
TCACATTAAAAAAGAAAATTTGGGGTCAAAATGCTCCTAAAGCCAGAGAC
TTAGACGATTTTGGACGGCGTCTCCCAGCTGTGAATGAACAAAGTTCGTG
TAAAGACAGCCAAAGAGCAGATATTTCCACGAATAATGCCCAGAAAGATT
CTAATTCACAAAAATCCATCACATACCTCCCATCATCCAAAACTAACCCA
TCTCTATCTACACCTTCTATCGCTAGCAAACCAATTGTGGCGATGAAGAA
AAGCTTTATGAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCAC
CTATTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGCT
TTAAAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAGA
TGTGAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGATG
ATGAAGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCAAAACGC
TCTGAGCCTTCAAAGAGTAATTCCCAAACACTCGAGAACAATAGTCTATC
TACAGACTACAAAATTTCAGCTCCTGCTGTTGATGCTGAATATGAGAGGG
AGAAAAACATTAGCAATAAAGAAAGAATTGATAATAAAGCTAGTCTCCGT
GTGGTTATAACTGATGTAAAAGAAGTTAATATACAAAAAGTTAAGGTGGC
TGCAAGTTGCCCTGTATGTGGAAGAGAATTTAAAATGAAACAAATGAAAC
TAATTAGCCATCATTTGGTAAGAAAACATGGTTTTAAGGTACGACAAGCT
CTTATGGAGGAGATGGTGGAGCATAGGTCAAGCAGACACGATTGGCTAAG
TGTATGAAACAGCACGGAGGAAAACATATTCTTCTGCCATGCGCAGTCGA
TCAATGCGACATGTGGTTTTGTAGCGATATGAGTTTTGAACAACATATGA
GGATGAAACATTGTATGTCTATGCCTGATGTTTATAAAGCGAGAGACGAG
TTAATTAAAAAACATTGGGATGGTAAAAAAGTACTCGTCAAAGAGATCTT
ATCAGGAATTAGTACCAACAATAAAAGTACATTAAATTCTAACGCCAAAT
CCAGTATGGAAGATTCAATGATATCTAAATCCAACACTGAAATCAGTACG
CGAAGACCTACTGAAAAGACAACAAATACATCCAAGTCTTCATCTTCAAC
CAGTGCCGGTGAAGAAATAACTACTGAAGTTACAAGGACATCTAAGTCTA
ACGCTGGAATGAGTGAACACATCACCACGGAACATACAAAGACATCTAAA
TGTAACACTGGAAACATTATCACGGATTCTTTCATGAAAGAAAAAACACA
AATTGAGAAAAAAAAATAAGTACCAAAAGAAACGATCAGTTATAGAAGCT
TTAAAACAAGAACGCATCATAATCTGCAAACGAAAACATCACGGTGAACA
TATCATAATGCCATGTGAAGAATGTAGAATTTGGTTATGCTGGGATTCCC
TTATCGACCACCTTCAGTTAAAGAAACATAACATGGATCGATTAGGTGCC
ATTGATTTCATGATCACATTAAAAAAGAAAATTTGGGGTCAAAATGCTCC
TAAAGCCAGAGACTTAGACGATTTTGGACGGCGTCTCCCAGCTGTGAATG
AACAAAGTTCGTGTAAAGACAGCCAAAGAGCAGATATTTCCACGAATAAT
GCCCAGAAAGATTCTAATTCACAAAAATCCATCACATACCTCCCATCATC
CAAAACTAACCCATCTCTATCTACACCTTCTATCGCTAGCAAACCAATTG
TGGCGATGAAGAAAAGCTTTATGAGCGACGCTTTAAGTTCACTCAAAAGT
ACTGGGTGCCCACCTATTAATAGTGCTTATACTACAATCAACCCTACGCT
TTTGAGAGAAGCTTTAAAGGATGATAAAGCACAATATGAGAAAGACTTTT
CATTAACGAAAGATGTGAAAAGCAATGTCGGTGAAAAACGAAAATCGATT
GTTATTGACGATGATGAAGACACTAAAGTGATTAACATCCAGCCTTCAAA
TAAATCAAAACGCTCTGAGCCTTCAAAGAGTAATTCCCAAACACTCGAGA
ACAATAGTCTATCTACAGACTACAAAATTTCAGCTCCTGCTGTTGATGCT
GAATATGAGAGGGAGAAAAACATTAGCAATAAAGAAAGAATTGATAATAA
AGCTAGTCTCCGTGTGGTTATAACTGATGTAAAAGAAGTTAATATACAAA
AAGTTAAGGTGGCTGCAAGTTGCCCTGTATGTGGAAGAGAATTTAAAATG
AAACAAATGAAACTAATTAGCCATCATTTGGTAAGAAAACATGGTTTTAA
GGTACGACAAGCTCTTATGGAGGAGATGGTGGAGCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003362XLOC_003362Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005895-proteinTCONS_00005895-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005895-exon-sc0000061-1575043694:189653..190080TCONS_00005895-exon-sc0000061-1575043694:189653..190080Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1575043694:188188..189193TCONS_00005895-exon-sc0000061-1575043694:188188..189193Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1575043694:186850..188098TCONS_00005895-exon-sc0000061-1575043694:186850..188098Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1575043694:186471..186505TCONS_00005895-exon-sc0000061-1575043694:186471..186505Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1510915933:189653..190080TCONS_00005895-exon-sc0000061-1510915933:189653..190080Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1510915933:188188..189193TCONS_00005895-exon-sc0000061-1510915933:188188..189193Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1510915933:186850..188098TCONS_00005895-exon-sc0000061-1510915933:186850..188098Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1510915933:186471..186505TCONS_00005895-exon-sc0000061-1510915933:186471..186505Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1491911889:189653..190080TCONS_00005895-exon-sc0000061-1491911889:189653..190080Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1491911889:188188..189193TCONS_00005895-exon-sc0000061-1491911889:188188..189193Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1491911889:186850..188098TCONS_00005895-exon-sc0000061-1491911889:186850..188098Clytia hemisphaericaexon
TCONS_00005895-exon-sc0000061-1491911889:186471..186505TCONS_00005895-exon-sc0000061-1491911889:186471..186505Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:186471..190080 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.28319	5.63503	4.32521	4.2654	2.35441	2.05153	2.04293	1.94934	0.90127	1.57379	0.495348	0.765167	0.365816	0.590893	0.96385	1.78045	1.86402	2.0498	0.25987	0.407903	1.49545	1.51958	4.64318	5.53868	1.01707	0.732024	0.728176	0.223589	3.75507	3.58699
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005895 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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