XLOC_003362 (gene) - C. hemisphaerica

Overview
NameXLOC_003362
Unique NameXLOC_003362
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:186471..190080-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003362 ID=XLOC_003362|Name=XLOC_003362|organism=Clytia hemisphaerica|type=gene|length=3610bp|location=Sequence derived from alignment at sc0000061:186471..190080- (Clytia hemisphaerica)
ATTCACAAAAATCCATCACATACCTCCCATCATCCAAAACTAACCCATCT
CTATCTACACCTTCTATCGCTAGCAAACAAAAAGTGGTGATGAAGAAAAG
CTTTATGAGCGACGCTTTAAGTTCACTCAAAAGTACTGGGTGCCCACCCA
TTAATAGTGCTTATACTACAATCAACCCTACGCTTTTGAGAGAAGCTTTA
AAGGATGATAAAGCACAATATGAGAAAGACTTTTCATTAACGAAAGATGT
GAAAAGCAATGTCGGTGAAAAACGAAAATCGATTGTTATTGACGATGATG
AAGACACTAAAGTGATTAACATCCAGCCTTCAAATAAATCAAAACGCTCN
ATGTAAAATAGAGTTACTGGCTAACACTCCTAGTAATGCTACCAACTTGT
TGAAAATTCATTTAATGGTGGAGCATAGGTAGGTAGTAATACCAACGTTT
TAGTATGATTTAAATTTATCTCGAAATACTTTGATTTGTGCATGATTTTC
TTTTTCTCCAGTCCATAGTTGCGCCTCTTCGATTAGGAAATACTTACGCA
AATTATTGAAAAATTNGAACAATAGTCTATCTACAGACTACAAAATTTCA
GCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAACAGTAGCAATAA
AGCAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTATAACTGATGTAA
AAGAAGTTAATATGCAAAAAGTTAAGGTGGCTGNTCAGATTTGTAGAACG
GCACCTGGAGTGTTTATTTTCTCGCTGATTTTCTCGCTAAGAAGAAGAAT
TATTAATGCATTTAATGATTAAACAGAAAAACGGTTTTTATTCTTAATGG
AAGAGAATAATTCATTTGTCCTTCTTTCAATGTTCAGGTACCAAAAGAAA
CGATCAGTTATAGAAGCTTTAAAACAAGAACGCATCATAATCTGCAAACG
AAAACATCACGGTGAACATATCATAATGCCATGTGAAGAATGTAGAATTT
GGTTATGCTGGGATTCCCTTATCGACCACCTTCAGTTAAAGAAACATAAC
ATGGATCGATTAGGTGCCATTGATTTCATGATCACATTAAAAAAGAAAAT
TTGGGGTCAAAATGCTCCTAAAGCCAGAGACTTAGACGATTTTGGACGGC
GTCTCCCAGCTGTGAATGAACAAAGTTCGTGTAAAGACAGCCAAAGAGCA
GATATTTCCACGAATAATGCCCAGAAAGATTCTAATTCACAAAAATCCAT
CACATACCTCCCATCATCCAAAACTAACCCATCTCTATCTACACCTTCTA
TCGCTAGCAAACCAATTGTGGCGATGAAGAAAAGCTTTATGAGCGACGCT
TTAAGTTCACTCAAAAGTACTGGGTGCCCACCTATTAATAGTGCTTATAC
TACAATCAACCCTACGCTTTTGAGAGAAGCTTTAAAGGATGATAAAGCAC
AATATGAGAAAGACTTTTCATTAACGAAAGATGTGAAAAGCAATGTCGGT
GAAAAACGAAAATCGATTGTTATTGACGATGATGAAGACACTAAAGTGAT
TAACATCCAGCCTTCAAATAAATCAAAACGCTCTGAGCCTTCAAAGAGTA
ATTCCCAAACACTCGAGAACAATAGTCTATCTACAGACTACAAAATTTCA
GCTCCTGCTGTTGATGCTGAATATGAGAGGGAGAAAAACATTAGCAATAA
AGAAAGAATTGATAATAAAGCTAGTCTCCGTGTGGTTATAACTGATGTAA
AAGAAGTTAATATACAAAAAGTTAAGGTGGCTGCAAGTTGCCCTGTATGT
GGAAGAGAATTTAAAATGAAACAAATGAAACTAATTAGCCATCATTTGGT
AAGAAAACATGGTTTTAAGGTACGACAAGCTCTTATGGAGGAGGTNAATT
TAAAATGAAACAAATGAAACTAATTAGCCATCATTTGGTAAGAAAACATG
GTTTTAAGTTACGACAAGCTCTTATGGAGGAGGTCAAGCAGACACGATTG
GCTAAGTGTATGAAACAGCACGGAGGAAAACATATTCTTCTGCCATGCGC
AGTCGATCAATGCGACATGTGGTTTTGTAGCGATATGAGTTTTGAACAAC
ATATGAGGATGAAACATTGTATGTCTATGCCTGATGTTTATAAAGCGAGA
GACGAGTTAATTAAAAAACATTGGGATGGTAAAAAAGTACTCGTCAAAGA
GATCTTATCAGGAATTAGTACCAACAATAAAAGTACATTAAATTCTAACG
CCAAATCCAGTATGGAAGATTCAATGATATCTAAATCCAACACTGAAATC
AGTACGCGAAGACCTACTGAAAAGACAACAAATACATCCAAGTCTTCATC
TTCAACCAGTGCCGGTGAAGAAATAACTACTGAAGTTACAAGGACATCTA
AGTCTAACGCTGGAATGAGTGAACACATCACCACGGAACATACAAAGACA
TCTAAATGTAACACTGGAAACATTATCACGGATTCTTTCATGAAAGAAAA
AACACAAATTGAGAAAAAAAAATAACACTGATGCTAAGCAGGAACAACAT
TCAACTCAAAAACCAACAGTTTATGGAGGAAAAGCAAACCCTATCACTAT
TGATATTGATTTAATTGAAAATGAAACTCTCTCTCGAAATAAAATGAAGT
CAAAAACCAAAGAAAATATCAAGGACATCGAAAATAAGGAATTATTTGTG
CTCAAAACTCCGTCTAACTCAGTTGCTACGGAAATTAAACTCGATATATT
TACGAAAACAACAAGCGAAGATCTTTCAAAATTGTCTGCGCCTTCTTTCG
AAGCTGAGAAAGAAGTTGGTAAAGGTAATAAAGGTTTTGTACTAAACACT
AATGATGAAAGTGCTAGCATTATATCTAAGTCGTTCGTTGGATCAGAAGC
TTTGGAAACGGAATGTGATAGAAATTCTACCACGGATGTAAAAGAGAGTT
TTCTGGAGACTGTGATCGCGGAGGAAAAAGAACTAAAATCGAGCACACGG
GAAAATGCCAGTGATCAAATAAAATCAACAGAAAATGGCGACGCTTTATT
TGGGATTTCATGTGAGAAAGTTTCTTTAAAAGCAAAACGTGACGGAGATA
TCATTATGGTTAATCAGAGTCGTCAAGAAATACCGGAGCCTTCGATTAAA
GAAGAGGGAGAAACAAGTGTCACCAATCTCTCGTGTAAAGACTCGTTTAA
AGTTACAACGCAACCTTGTCAAACGCTGGAGGTATATAAAACTATTTACT
TGTTAGAAGAGATCCTCTTTACAATGTCCCATTGATCGATATTGTTTTCT
ATTTACTACCTGGGTAGGTTTAAAGAATATTTGTTTATGTTTTTAACAAT
CAGCATCAATCGCGATCGACTTCTGATATTGAGTGAAGGCTGATAAGGAA
GTAGAAAATGTAACGAGATTTCTAATTTTGTCATTGCTTTCAAATTGGCG
GATGGCTTTTGTTTCTGGGTCTTACATGGAAACAAAGTTCTACCTTTCAA
TAAGAAGAGATTTGTCAAAACTCATTCAAGAACTCATTTTCTTTACTTAA
GTAAATAAATTACCTTTTTACTCAGGAATTGGTTCAAGATATTCAAAACA
TCACAACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005895TCONS_00005895Clytia hemisphaericatranscript
TCONS_00005894TCONS_00005894Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005895-proteinTCONS_00005895-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:186471..190080 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.08	10.29	7.87	7.11	5.07	3.98	5.01	5.32	1.38	2.41	1.47	1.29	0.51	0.71	2.31	3.36	2.54	3.88	0.42	0.73	2.86	2.34	10.58	10.18	2.06	1.82	1.18	0.77	6.99	7.06