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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005521 ID=TCONS_00005521|Name=TCONS_00005521|organism=Clytia hemisphaerica|type=transcript|length=1312bp
gatcgcaccaatggagttacttcattttcttttgcgtggaagctttgctc
gaaaaaatgCGATcgtagcgcgcgcaagtggataCCAGCCTTAACAAAAC
GGAAATATCTTTTGCTATTTAATCAAAGCACTAATCTGTGGTTTTCCATT
GAACAAAAGCAAAGATTTATTCCTTTGGCTTTGTATCGAATGAACTGATT
TATATCCAAGAATTTTCATGACACCATTACACGAGCCTTGTATAGTTTGC
ACTAAGTCATGGTTCATCATCAACCGCCATTTATCGCTAACAGTTGAAAT
ATCTCGAGGTGAAGTCGAAAAACGTTTGGAGAATAATTTTTTAGTTGTCC
TGATTTTCGGTCGAGTTCGACTTCGAGTTTTGCTCTCAAAATATTTAGGT
ATATCACTTgggaatcctaaaaacttctCAAGGGAATTCCCAAGAGAGGT
TAGGTTCGTTTGTAGATCTTCGTATCTCAAAACTTTATATTTGATGGTAC
TATGATCATGTAACTCTTCGTGATgagttgtttttaaaaaatggttCATA
TTTTTACGAATAAGGGAACAAGATAAATCAACAAATGGTTTTACTCTTTT
CATTGGATTTGGTTGTTGTTCATGAAACCAATGTAATTGATACTTCGAGA
ATAAAAATGCTCTAGGATCTCTCATTGAATGGATTAACAGAATCTGGTAA
TGTTCTGGTAAACTTAAATCCTCTAAACTTGACATACGACCAAAAGGCAT
ACGAAATGATAACTCCTTGACTACAATTTTATATTCATTTTTCACACAAA
GCTGATTCATCAATTGTGAATCAATTTTCCTACATTTATGAGTTTTAGCG
TCGCAGAAAGGTGCCATAGTTAAGACCTTGCTACGCCGATGATTCATCTT
GGGGCTTTCCAAGTATTTCAAATAATGATCATGCTTTTTCTGGTAATTAC
AAGTTACGATGTCTTTAAGAAATTCTTTAGCTTCCTGAGCGTAAAACTTC
TCTTGGTTGTTAGCGCTGCTATCaacatcaaagaagaaatcGCGTCCATA
ATATTGATGTATAGCTCTTAAAGGTTCGAATAAATAAATTACATCATCTT
GACTATTGAAGAGATCACCAAGTAAGGAAGTACCAGTTCGACCAGGGCCA
ACTATAAATATCGCTTTCTTCGTTTTGCGGTTGGTGAGGTTTCCAGGTAG
AAATTTGATAATGCTTGAAAATTGTGTCCAACATATTAAAACATATATTG
ATAGCAACAATCCAATGATGATGATTTTcgtttttctggatttcagTCGA
ACCATTGCTTTT Run BLAST on NCBI protein sequence of TCONS_00005521-protein >TCONS_00005521-protein ID=TCONS_00005521-protein|Name=TCONS_00005521-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
KAMVRLKSRKTKIIIIGLLLSIYVLICWTQFSSIIKFLPGNLTNRKTKKA
IFIVGPGRTGTSLLGDLFNSQDDVIYLFEPLRAIHQYYGRDFFFDVDSSA
NNQEKFYAQEAKEFLKDIVTCNYQKKHDHYLKYLESPKMNHRRSKVLTMA
PFCDAKTHKCRKIDSQLMNQLCVKNEYKIVVKELSFRMPFGRMSSLEDLS
LPEHYQILLIHSMRDPRAFLFSKYQLHWFHEQQPNPMKRVKPFVDLSCSL
IRKNMNHFLKTTHHEELHDHSTIKYKVLRYEDLQTNLTSLGNSLEKFLGF
PSDIPKYFESKTRSRTRPKIRTTKKLFSKRFSTSPRDISTVSDKWRLMMN
HDLVQTIQGSCNGVMKILGYKSVHSIQSQRNKSLLLFNGKPQISALIK Run BLAST on NCBI transcript from alignment at sc0000053:424529..425840 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005521 ID=TCONS_00005521|Name=TCONS_00005521|organism=Clytia hemisphaerica|type=transcript|length=1312bp|location=Sequence derived from alignment at sc0000053:424529..425840 (Clytia hemisphaerica)
AAAAGCAATGGTTCGActgaaatccagaaaaacgAAAATCATCATCATTG
GATTGTTGCTATCAATATATGTTTTAATATGTTGGACACAATTTTCAAGC
ATTATCAAATTTCTACCTGGAAACCTCACCAACCGCAAAACGAAGAAAGC
GATATTTATAGTTGGCCCTGGTCGAACTGGTACTTCCTTACTTGGTGATC
TCTTCAATAGTCAAGATGATGTAATTTATTTATTCGAACCTTTAAGAGCT
ATACATCAATATTATGGACGCgatttcttctttgatgttGATAGCAGCGC
TAACAACCAAGAGAAGTTTTACGCTCAGGAAGCTAAAGAATTTCTTAAAG
ACATCGTAACTTGTAATTACCAGAAAAAGCATGATCATTATTTGAAATAC
TTGGAAAGCCCCAAGATGAATCATCGGCGTAGCAAGGTCTTAACTATGGC
ACCTTTCTGCGACGCTAAAACTCATAAATGTAGGAAAATTGATTCACAAT
TGATGAATCAGCTTTGTGTGAAAAATGAATATAAAATTGTAGTCAAGGAG
TTATCATTTCGTATGCCTTTTGGTCGTATGTCAAGTTTAGAGGATTTAAG
TTTACCAGAACATTACCAGATTCTGTTAATCCATTCAATGAGAGATCCTA
GAGCATTTTTATTCTCGAAGTATCAATTACATTGGTTTCATGAACAACAA
CCAAATCCAATGAAAAGAGTAAAACCATTTGTTGATTTATCTTGTTCCCT
TATTCGTAAAAATATGaaccattttttaaaaacaactcATCACGAAGAGT
TACATGATCATAGTACCATCAAATATAAAGTTTTGAGATACGAAGATCTA
CAAACGAACCTAACCTCTCTTGGGAATTCCCTTGagaagtttttaggatt
cccAAGTGATATACCTAAATATTTTGAGAGCAAAACTCGAAGTCGAACTC
GACCGAAAATCAGGACAACTAAAAAATTATTCTCCAAACGTTTTTCGACT
TCACCTCGAGATATTTCAACTGTTAGCGATAAATGGCGGTTGATGATGAA
CCATGACTTAGTGCAAACTATACAAGGCTCGTGTAATGGTGTCATGAAAA
TTCTTGGATATAAATCAGTTCATTCGATACAAAGCCAAAGGAATAAATCT
TTGCTTTTGTTCAATGGAAAACCACAGATTAGTGCTTTGATTAAATAGCA
AAAGATATTTCCGTTTTGTTAAGGCTGGtatccacttgcgcgcgctacgA
TCGcattttttcgagcaaagcttccacgcaaaagaaaatgaagtaactcc
attggtgcgatc Coding sequence (CDS) from alignment at sc0000053:424529..425840 >TCONS_00005521 ID=TCONS_00005521|Name=TCONS_00005521|organism=Clytia hemisphaerica|type=CDS|length=1197bp|location=Sequence derived from alignment at sc0000053:424529..425840 (Clytia hemisphaerica)
AAAGCAATGGTTCGActgaaatccagaaaaacgAAAATCATCATCATTGG
ATTGTTGCTATCAATATATGTTTTAATATGTTGGACACAATTTTCAAGCA
TTATCAAATTTCTACCTGGAAACCTCACCAACCGCAAAACGAAGAAAGCG
ATATTTATAGTTGGCCCTGGTCGAACTGGTACTTCCTTACTTGGTGATCT
CTTCAATAGTCAAGATGATGTAATTTATTTATTCGAACCTTTAAGAGCTA
TACATCAATATTATGGACGCgatttcttctttgatgttGATAGCAGCGCT
AACAACCAAGAGAAGTTTTACGCTCAGGAAGCTAAAGAATTTCTTAAAGA
CATCGTAACTTGTAATTACCAGAAAAAGCATGATCATTATTTGAAATACT
TGGAAAGCCCCAAGATGAATCATCGGCGTAGCAAGGTCTTAACTATGGCA
CCTTTCTGCGACGCTAAAACTCATAAATGTAGGAAAATTGATTCACAATT
GATGAATCAGCTTTGTGTGAAAAATGAATATAAAATTGTAGTCAAGGAGT
TATCATTTCGTATGCCTTTTGGTCGTATGTCAAGTTTAGAGGATTTAAGT
TTACCAGAACATTACCAGATTCTGTTAATCCATTCAATGAGAGATCCTAG
AGCATTTTTATTCTCGAAGTATCAATTACATTGGTTTCATGAACAACAAC
CAAATCCAATGAAAAGAGTAAAACCATTTGTTGATTTATCTTGTTCCCTT
ATTCGTAAAAATATGaaccattttttaaaaacaactcATCACGAAGAGTT
ACATGATCATAGTACCATCAAATATAAAGTTTTGAGATACGAAGATCTAC
AAACGAACCTAACCTCTCTTGGGAATTCCCTTGagaagtttttaggattc
ccAAGTGATATACCTAAATATTTTGAGAGCAAAACTCGAAGTCGAACTCG
ACCGAAAATCAGGACAACTAAAAAATTATTCTCCAAACGTTTTTCGACTT
CACCTCGAGATATTTCAACTGTTAGCGATAAATGGCGGTTGATGATGAAC
CATGACTTAGTGCAAACTATACAAGGCTCGTGTAATGGTGTCATGAAAAT
TCTTGGATATAAATCAGTTCATTCGATACAAAGCCAAAGGAATAAATCTT
TGCTTTTGTTCAATGGAAAACCACAGATTAGTGCTTTGATTAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005521-exon-sc0000053-1491911889:424529..425840 | TCONS_00005521-exon-sc0000053-1491911889:424529..425840 | Clytia hemisphaerica | exon |
| TCONS_00005521-exon-sc0000053-1510915933:424529..425840 | TCONS_00005521-exon-sc0000053-1510915933:424529..425840 | Clytia hemisphaerica | exon |
| TCONS_00005521-exon-sc0000053-1575043694:424529..425840 | TCONS_00005521-exon-sc0000053-1575043694:424529..425840 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053 | supercontig | sc0000053:424529..425840 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
The following BLAST results are available for this feature:
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