XLOC_003139 (gene) - C. hemisphaerica

Overview
NameXLOC_003139
Unique NameXLOC_003139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:424529..425840-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003139 ID=XLOC_003139|Name=XLOC_003139|organism=Clytia hemisphaerica|type=gene|length=1312bp|location=Sequence derived from alignment at sc0000053:424529..425840- (Clytia hemisphaerica)
GATCGCACCAATGGAGTTACTTCATTTTCTTTTGCGTGGAAGCTTTGCTC
GAAAAAATGCGATCGTAGCGCGCGCAAGTGGATACCAGCCTTAACAAAAC
GGAAATATCTTTTGCTATTTAATCAAAGCACTAATCTGTGGTTTTCCATT
GAACAAAAGCAAAGATTTATTCCTTTGGCTTTGTATCGAATGAACTGATT
TATATCCAAGAATTTTCATGACACCATTACACGAGCCTTGTATAGTTTGC
ACTAAGTCATGGTTCATCATCAACCGCCATTTATCGCTAACAGTTGAAAT
ATCTCGAGGTGAAGTCGAAAAACGTTTGGAGAATAATTTTTTAGTTGTCC
TGATTTTCGGTCGAGTTCGACTTCGAGTTTTGCTCTCAAAATATTTAGGT
ATATCACTTGGGAATCCTAAAAACTTCTCAAGGGAATTCCCAAGAGAGGT
TAGGTTCGTTTGTAGATCTTCGTATCTCAAAACTTTATATTTGATGGTAC
TATGATCATGTAACTCTTCGTGATGAGTTGTTTTTAAAAAATGGTTCATA
TTTTTACGAATAAGGGAACAAGATAAATCAACAAATGGTTTTACTCTTTT
CATTGGATTTGGTTGTTGTTCATGAAACCAATGTAATTGATACTTCGAGA
ATAAAAATGCTCTAGGATCTCTCATTGAATGGATTAACAGAATCTGGTAA
TGTTCTGGTAAACTTAAATCCTCTAAACTTGACATACGACCAAAAGGCAT
ACGAAATGATAACTCCTTGACTACAATTTTATATTCATTTTTCACACAAA
GCTGATTCATCAATTGTGAATCAATTTTCCTACATTTATGAGTTTTAGCG
TCGCAGAAAGGTGCCATAGTTAAGACCTTGCTACGCCGATGATTCATCTT
GGGGCTTTCCAAGTATTTCAAATAATGATCATGCTTTTTCTGGTAATTAC
AAGTTACGATGTCTTTAAGAAATTCTTTAGCTTCCTGAGCGTAAAACTTC
TCTTGGTTGTTAGCGCTGCTATCAACATCAAAGAAGAAATCGCGTCCATA
ATATTGATGTATAGCTCTTAAAGGTTCGAATAAATAAATTACATCATCTT
GACTATTGAAGAGATCACCAAGTAAGGAAGTACCAGTTCGACCAGGGCCA
ACTATAAATATCGCTTTCTTCGTTTTGCGGTTGGTGAGGTTTCCAGGTAG
AAATTTGATAATGCTTGAAAATTGTGTCCAACATATTAAAACATATATTG
ATAGCAACAATCCAATGATGATGATTTTCGTTTTTCTGGATTTCAGTCGA
ACCATTGCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005521TCONS_00005521Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005521-proteinTCONS_00005521-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:424529..425840 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHST5carbohydrate sulfotransferase 5 Homo Sapiens
CHST3carbohydrate sulfotransferase 3 Homo Sapiens
CHST1PREDICTED: carbohydrate sulfotransferase 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.74	0.44	0.33	0.32	0.65	0.55	2.4	2.52	0.73	1.88	0.65	0.9	2.48	2.02	0.8	1.47	1.18	2.38	5.47	6.83	2.58	2.55	1.77	1.91	1.66	2.25	0.26	0.14	0.29	0.04