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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005402 ID=TCONS_00005402|Name=TCONS_00005402|organism=Clytia hemisphaerica|type=transcript|length=1343bp
TGGATTATTCTGGTTGGAACTATCTTTCCAACAGTGCATAGCTTTTTAAG
ATAGCATAAATGTGTAGAAAATTTGCTAAAGAGGTAATGTGTCAACATAC
TTTTGTAACAAAATGTACCCCTAGTTTCCAGGAAAATTTGTCTAAGGTAC
CACAACCCCTTTTCAGTGCCTTCAATAATaccaaatttttcaataattca
agtttttttgtacTGCAAATAGTgcgatgttttaaaaattattgagATGT
ATTATATGAAGGGAGGCAATACAAGTCTGTTATCTTCTATCTGCCGAGAG
TGCTCGATGATATCAGAGCttgttcaaattaaaagaaagagactttgatt
tattacttagaactttaagtttcatgccgGATGGACGACAATCAACAGCT
AAATGAAAATTTAGTGAAGAAGTGATGGtttccccctcattttggtcatA
AATCACTTATAAAATGACATCAAATAACACCCATTCAGTACAGAAATCGG
CCATACTCGCTacaaagtcttctatatagtttttcaagAGCTTTCAGATT
CTTTAATTAGTTTAGGcttaaaatgagtttgaaatttccataaaaattgg
GCCCTTGGGCTTTAGCCTACTTTTTCAATAAATGGGTCCAAAAATAGGGG
CTACCCTTAAAATCATTCTGGGAAGCCCTTCTAATATCAATCCATAGGGT
ATTAGGCATGTCTGGTCCAAATTTGgtgctttgttccaaatttgcacAAT
TTTTATGGAATTTGTTACAAATCAGGCCTACTAGTTctgaaaaagtgaat
ttttttaatgcaGTGATTAATTTTCCAAAACCATGGACGAAGAACTTTTG
CCCTCTAGACATTCTAAATGGGTGTTTTCACAATTTTAATGGCCTACAAT
GTCCAACTTGATTATGAACAGCATttatttcgaatgttttgaaggAGTTC
AAATAATGTCAGTGGTgataaatatctttattttgaaCTAAATAAACTAA
ACTAATCGCTGCATCATAGCTTCAAAGTTAAATCAACCTAtttaaaactc
aatttttaCCTTCGAAAACTACTTGTCAGACTCATTGCAATACATCTAGT
TCATTTTACTTTAAGATTTTGGACTATCACAGGGctgtaaataaatattt
tagtcaATCTGCAGACATCATGTCCGATGGAAATTTCttgcgtttttagg
caaaattgatttttggcaCCCCCCCCAGGATTCTGGGGGGGAGGGGGTTT
gacgattttcaaattttttgaatcaggtgggggttgagttgatgaaaaaa
ttcaggtgggggtaaccctataCAGGTGGGGGTGGACATTTTC Run BLAST on NCBI transcript from alignment at sc0000052:613485..614827 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005402 ID=TCONS_00005402|Name=TCONS_00005402|organism=Clytia hemisphaerica|type=transcript|length=1343bp|location=Sequence derived from alignment at sc0000052:613485..614827 (Clytia hemisphaerica)
GAAAATGTCCACCCCCACCTGtatagggttacccccacctgaattttttc
atcaactcaacccccacctgattcaaaaaatttgaaaatcgtcAAACCCC
CTCCCCCCCAGAATCCTGGGGGGGGtgccaaaaatcaattttgcctaaaa
acgcaaGAAATTTCCATCGGACATGATGTCTGCAGATtgactaaaatatt
tatttacagCCCTGTGATAGTCCAAAATCTTAAAGTAAAATGAACTAGAT
GTATTGCAATGAGTCTGACAAGTAGTTTTCGAAGGtaaaaattgagtttt
aaaTAGGTTGATTTAACTTTGAAGCTATGATGCAGCGATTAGTTTAGTTT
ATTTAGttcaaaataaagatatttatcACCACTGACATTATTTGAACTcc
ttcaaaacattcgaaataaATGCTGTTCATAATCAAGTTGGACATTGTAG
GCCATTAAAATTGTGAAAACACCCATTTAGAATGTCTAGAGGGCAAAAGT
TCTTCGTCCATGGTTTTGGAAAATTAATCACtgcattaaaaaaattcact
ttttcagAACTAGTAGGCCTGATTTGTAACAAATTCCATAAAAATTgtgc
aaatttggaacaaagcacCAAATTTGGACCAGACATGCCTAATACCCTAT
GGATTGATATTAGAAGGGCTTCCCAGAATGATTTTAAGGGTAGCCCCTAT
TTTTGGACCCATTTATTGAAAAAGTAGGCTAAAGCCCAAGGGCccaattt
ttatggaaatttcaaactcattttaagCCTAAACTAATTAAAGAATCTGA
AAGCTcttgaaaaactatatagaagactttgtAGCGAGTATGGCCGATTT
CTGTACTGAATGGGTGTTATTTGATGTCATTTTATAAGTGATTTatgacc
aaaatgagggggaaaCCATCACTTCTTCACTAAATTTTCATTTAGCTGTT
GATTGTCGTCCATCcggcatgaaacttaaagttctaagtaataaatcaaa
gtctctttcttttaatttgaacaaGCTCTGATATCATCGAGCACTCTCGG
CAGATAGAAGATAACAGACTTGTATTGCCTCCCTTCATATAATACATctc
aataatttttaaaacatcgcACTATTTGCAgtacaaaaaaacttgaatta
ttgaaaaatttggtATTATTGAAGGCACTGAAAAGGGGTTGTGGTACCTT
AGACAAATTTTCCTGGAAACTAGGGGTACATTTTGTTACAAAAGTATGTT
GACACATTACCTCTTTAGCAAATTTTCTACACATTTATGCTATCTTAAAA
AGCTATGCACTGTTGGAAAGATAGTTCCAACCAGAATAATCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005402-exon-sc0000052-1491911889:613485..614827 | TCONS_00005402-exon-sc0000052-1491911889:613485..614827 | Clytia hemisphaerica | exon |
| TCONS_00005402-exon-sc0000052-1510915933:613485..614827 | TCONS_00005402-exon-sc0000052-1510915933:613485..614827 | Clytia hemisphaerica | exon |
| TCONS_00005402-exon-sc0000052-1575043694:613485..614827 | TCONS_00005402-exon-sc0000052-1575043694:613485..614827 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000052 | supercontig | sc0000052:613485..614827 . |
Blast
The following BLAST results are available for this feature:
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