TCONS_00005335 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005335
Unique NameTCONS_00005335
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005335 ID=TCONS_00005335|Name=TCONS_00005335|organism=Clytia hemisphaerica|type=transcript|length=2475bp
AATCACCACACACACAAAAAGTcattgacaaataaaaaaaaggaaagaga
gATTTACCtcattaaaacaaaaaacaacataagAAAAAAGGACTCTCCTG
CTCCCTGTTTTCATTATAATTCCAAAATCTACTGTCAAGATGAAAGCTTT
GATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGACAA
GACCAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACCAA
GTGGAAGCTTTGGCTGCTGCTGGTGTTGATCATGTCATTTTGGCTGTTAG
TTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGC
TTGGTATCAAATTTAGTATGTCACACGAAGTTGAACCATTAGGAACAGCT
GGTCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGaaccttt
ctttgttttgaactGTGATATTACAAGTGAATTCCCTTTCAAGCAAATGT
TAGAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTAGTCACCAAA
GTAGAAGAACCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCAGG
CAAAATCAACAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAAAA
TCAATGCTGGAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAGAG
ccaagACCAATGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAATGA
TAGCCAGCTATATTGCATGGAGTTATCAGGTCATTGGATGGATATTGGTC
AACCAAAAGATTTCATCACTGGAACCAAATTACATTTAAATTCATTACGG
AGGAGAAATGCGGAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAATGT
TTTTACCGATCCAACAGCTAAAATCGAGCCCGAATGTCAAATAGGACCAA
ATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGgtGCATGTTTATCC
AATTGCATAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTACG
AGATTCAATTATCGGATGGAAATCAACTGTCGGACGATGGGTCCGTATGG
AAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGATGAGATCTAT
TTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAGCCTCTGTTCC
CGAACCCAATATTGTCATGTAGACTGGATAAGTTCTTTTTAACAACGTCT
GTCAGTATTGTTGTCTCATGTGAAGCTTTCAAAGTTTAAAGATTGAAACT
AAGGCTTCTCAGTTATCAATTGGGTATGTTCTAAGtctttttcaaagaat
ttgttAAGGAAGACAAGCTGAAGACTTTCAACTTCTATGAATATTATTTC
TTTCGTTTTTAGAGTAAacccttttgattttttttctaactaTAAGTGAC
GGGGCCCtactattcttatttttttgtaacGGTTATTATAAAGGGTTCTG
GGTaggatattttttaaatgaattatgTGTTATTTAATAAACATAAAAAC
TAATAGTTAGGACAAGCAACTGGATAAATTTTTGTTCAAATGTATGGCTA
CAAATTTACcatttctattcatgatatgcaccactggagagccttccaag
aattttcaaaaaattccaaCCAATGTGAAatttctcagaagactctccag
tggtgcatatcatgaattctacCGCTTATAAGCGTTGAAATGTATTTATC
AACCTTTGCGTTGCAAGAGGATTGGGGCCGAATTTTTCCAGGGTTGTGTG
ATGTCAAATGTTGTTGTTGCTGGCCAATGCATGATATGTACCATTGCAAT
ATCTTCTGGCATTACATTATGgaaccaacagctgattggttgcaatttta
cgtcactttcaaccaatcagctgtagggtccgtagaagacattgcaatgg
tgcatttCACGAATTGCATTATGAAGTCATTCAACTCggctgacctttat
ataccctggacacaGCTTTTCGATACCGGCCAAACagaatctttgatcgg
agtatTTTGAAAGTGATATTTTAATGATTTGTAAATTGACCCACATTGAG
AAGTGCTACCATTAAGGTTCCCTTTTTCTAAACTCTACAGGACAGTGTTC
AACCATTGTAAACTTCGGCCGAATCCTTTTGTGTGGTTCATAGTGGTATA
ACACCATGTTCGCATATAACGGTTCAGTTTCGCTcggaaacgaaatgaag
ccattctattggttaaaagtgacgtaaaacttaaATTTAAACCAATAGGa
cggcttcatttcgtttcggagtgaAACGGAACCGTATTGTGCGAACGTGG
TCCAAGCTATTCTTCATATGTTTTATCAGCTTATTTTGATATTGCTGGTT
ATAGCTAACTATTAGTTTTATCTTATTGTCTTATATCTATAGCTAAATTC
AGGAAAGTCCTAGTCAAAGACTTGC
Run BLAST on NCBI

protein sequence of TCONS_00005335-protein

>TCONS_00005335-protein ID=TCONS_00005335-protein|Name=TCONS_00005335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MKALILVGGYGTRLRPLTLTRPKPLVEFCNKPTLLHQVEALAAAGVDHVI
LAVSYLSEMLENELRKEEEKLGIKFSMSHEVEPLGTAGPLALAKHWLEES
DEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYE
EDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPY
MANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGV
RGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSH
SWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTIS
ASVPEPNIVM
Run BLAST on NCBI

transcript from alignment at sc0000052:333504..342112-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005335 ID=TCONS_00005335|Name=TCONS_00005335|organism=Clytia hemisphaerica|type=transcript|length=8609bp|location=Sequence derived from alignment at sc0000052:333504..342112- (Clytia hemisphaerica)
AATCACCACACACACAAAAAGTCATTGACAAATAAAAAAAAGGAAAGAGA
GGTGAGTAATATATTGGTACTGAATAATAGAGTAATGCCATAAGATCCAT
ATAATCCATTTTCTCGCCTAGTAATGTTATTTNTCAGGGGGTCTGAAAAG
AGCCTCAGAGAAGATAGGCAGAAATAAAAAGTCGATGTCGGAACGAGCAA
TAGACAAGAGTTCTTTCCCTAGGGAATAGTGTATTTCCGGAAGAATGAGA
ACAAGTTACTTAAAAAGCCTGGTAGGGAAGTTCTTTTTCCTAGGATTTGC
TCGATGACCCAGATCGAAACCAAAATAATTCCAGTGCATAACAACAACTT
TTTCTACGTGGAGGATGATAGTAATCACCACACACACAAAAAGTCATTGA
CAAATTAAAAAAAGGAAAGAGAGGTGAGTAATATATTGGTACTGAATAAT
AGAGTAATGCCATAAGATCCATATAATCCATTTTCTCGCCTAGTAATGTT
ATTTTTATGTTTTGTTCAAGATTTACCTCATTAAAACAAAAAACAACATA
AGAAAAAAGGACTCTCCTGCTCCCTGTTTTCATTATAATTCCAAAATCTA
CTGTCAAGATGAAAGCTTTGATTCTTGTTGGAGGGTACGGAACTCGTCTG
AGACCCTTAACATTGACAAGACCAAAACCACTTGTTGAATTTTGTAATAA
ACCAACACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGTAAGTATCTTTT
CTTTTATTCTATATATTATGAACTCATTTGCACATTGACCATTGTAAGGA
AGGGAGTGTGCTTTGAAATTAAATTAAGTGAACTTACCTGTTTCTGAGTG
AGTCAAATACTGTGAACTTATCTACCGTGAGATTTGGTAACTTGCATCAG
TGGAGGCTAACATGCATAGCCCTCAAATGAATGACCTGGCTGGTCATTGA
AATAAACTATATATTCAGCTCCGCTCACAGCTCTACTCTACCATTTTTGT
TTTGACTTAACCAGGCCATTCATTTTAGGGCTATGCATGTTAGCCTCCAA
TGAACTGATGCAAGTTACACAATCTCACGGTAACTAATAAAATTCTGATG
GAGTACAGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGATG
GCAATTCGGCCACCATTTCTCAAAAGCTCCAAAGTCATTTAATTTGAGTT
AATGAATGGCGTATTAAAAGAATACAGAATTTCTCTTTTGCACTGAGTAG
CCTTTAAATCAAAATATGGAAAGAATCTGTAGTAGTGGAACACACGCGAA
TGTCTGGAACGAAGAAGACCAAATTAGCAAAACAATGGAGTGTTGTCGTT
ATCGTGACATATTATGACAGAAAGTATGATTGATAAACTTGGTGGAGTTA
TCAAAACAAATTTGTTTTCAAAAAGAATTAACAGTAAGTATAAATACAGG
CCAGATATCAACAGTCCCATGCTTCGACCTATCGTCCCAAGTTAGATCAG
TTGACCATAAATAGTTATTCAAAAGATCGTCGCATTCTAACAAACAACGA
TGATTGTAATCAAATATTACCCAGGGTTTGCCGTTCAATTGCTTCGATTA
CGTTTGATTGTATTCGATAATGTGTGATTACGTTCAATTGATTCAATCAT
AGTATTCACTTGCTTCATTATTCGCTCACGTACGTACATTACGTACTTTG
CATATTGGCAGTCGCCCACGCTAAAGCTCTAAAGGGTTGGGTCAATTTAA
TTGCAATCAAACTTATCGAATATAATCGTTAGATAAATGGAACGTAGTTG
ACAGTCAATTGAACCAATCGAACATTATTCAAACACAATCAAATATTACT
TAGGAATTGGCCATTCAATTAAGATTCAACAATTCAACAATCGAATAGCA
CTTATTTGATTGTGTTTGATTACATTCAATCGGTTCGATCTTGATTTCCT
TTCGAACATTTTCAATTAACACTGTCTGGACATTCTCCTGAATTATAACA
CGTGATAACGCAGGGGATAACGCTGCAAAAGTTTAGGGTTTCATTTATGT
AATACAGAGCAGATACTTTCTGGCTCGAATGGGTGGAGTAATTTAATATG
TAGAACTTAGTCAATAGGTTGTCCCATTCTTCAAAATGGCTATTGCAAGG
GGGTCATTTGTTCTCATTCACTATATTAAAGTGATACTGGTTAAAGAATT
TTTGATAAATGCCCTCTTCTAAAATCCAAAAAAAGTAATAAAAATCCAGG
CCGTTTATTCAAAGTAATCTGGTTTACTACAAATGCGGTATATGAATAAT
GTAATTAATACACCATTCAAAAAATTATAAACACTTCCATAATTTCGAGT
CACTAATATGACTTGAAAGATTGCTCAAATCTACAGAGAGTGGTCAGAAT
ATCAAACATCAATGCAAAATGTACTCTTTATCAAATTTAAAAACTAAAAG
TAAATGATATACATGGTTATTCCTGTAATTAAGCAAAGATCTATTATTTT
CTAAATGTTGAATTGTGAAAAAGAATTCAGCTATTATTATTATTCAATTT
TTCCCAATTCGTTACGGAATGGGTTCTCTCGGAGAATAGTATTTCCAATT
ATTTTTCTATATGACTTATTTCCAATAGGCTGGTGTTGATCATGTCATTT
TGGCTGTTAGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAG
GAAGAAAAGGTTAGCTCCAATTTGTTTGAGATATTTTAAAAGCTTACCAA
CATATTTCTGATCAATTTAAAAGTTGAGGTTTAGGATCAAATTTCACCCC
AAATCTTTCCAAGATATGGTATATACTTGACTGGATAAGCTTCCTGTTTA
ATCATGAAACTTCTTGATTATTTTCGGGATTTTTTTGTTTTTATAGTATT
TTGTGCAATACACAATTATTTTAGTGATTCTCCTCATAATTTAGCTTGGT
ATCAAATTTAGTATGTCACACGAAGTTGAACCATTAGGAACAGGTAAAAT
ATCACTTTAAAAAGTCTTTATTTCTTTACATCCACTTTCATATTGTGTTA
GAAAAATTACAAAATGATTCACATTCTTCTCAAAGTTATTTCATAATAAC
TTTTGTTACCATGGTAGATTTTTACACCTCTGAGTATTCTTGGATGTTAT
ATTTAACGAAGGAAAGTGACTTATATTGATAGTTTAGTGAAACATTAATA
GTTTTTCCTTCCATATGTTTCCCTTCAAGTTATTAAAAAACTAAAAAAGC
CTTTGAAAAGCTTTGCTTTAACAGCAGAACCAGATAACAAAGAGCTCCAG
GTTTTTAATGTCTCATGATTTGAACTCTATTATACAGATTCAAAAGGGTA
TAAATGTGAACTTAAATCACTGACCTTTATATATCCCTGGACCAAGCTAT
ATCTGCCATCTTTGATCAAAGTTTTTTTTGAAATGGATGTAAAGAAGCCA
TTGTAGTGTTAAAAATTAATGTCTAACGGCGCTACATCATCAAAAGTATT
CCAGAGAAGGTAGATCTAACGCTCTCGATGTATTTACACCGCTATTGAGT
GGTGCCACCTTTAGGGTACCACTTTTCAAAAAACTTAGATCAAAGATTTC
GCTTGGCCGGGATTGAGAAACTTGGTCCAGGGTATATAAAGGTCAGTGAC
TTAAATGTACTATATTTGTACTGAATGAAAACTTTATGACTCCAAGCAGG
AATTTAAAAAAGTGAAATCCAAAAAAATACATGAATAAATGCCACATGAT
TATGTTATTTTTTATAGCTGGTCCATTAGCACTTGCTAAACATTGGCTGG
AAGAATCAGATGAACCTTTCTTTGTTTTGAACTGTGATATTACAAGTGAA
TTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAACATGGAAAAGAAGG
AACAATTGTAGTAAGTTCTTTTTCATTTTTCATTGCCTATATCTTTTTCT
CATTCTTGCTTCACTTTAGGAGGCCTGTTAAGTGATACTTCTGTGTTCTA
CTATTTTATGGACCTGAGAAATCTTGAACAATTACTTTAGATGCTATGCT
AAAATTAGATCCGTAGAATATCTCGTCTGAATACCATCAACGTTTATATT
TAGCGTATAGGCTTATTCCATTTAATAATTTCGAAATCATTACATTACTT
TTTATACTATTGAATATTTAAAGATTCAAAGCAATTGTTCCCAATTATTT
CCATCGAGTTGCCGTTTCAATGAGTTTCTCGTCGTTATTATACATGGGTT
AGCATTTTAACATCTCTTGTTTGCATATTTAGGTCACCAAAGTAGAAGAA
CCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAA
CAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAAAATCAATGCTG
GAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAGAGGTGAGGCCA
TGTTCATATTTCTTGCTTTTTATTTCTTCCCTTCCCTTTCTTTTGTTTTT
TTTTCAATATTTCTTTATTGCCTTTTCTGTAAGAAAAACTGGGCACTGAC
ACTCCTTTTCAACCCCAGCGTTTTCCTCAGCGTTTACCTCAAGCATTTTG
ATACATTTTTCCAATTTCATGTCAAAGCCTCAATTCGGGTTTTGTTTTTA
AAAATAGATTCCTCGATGTAATAAGTATAGTTGAGGCTCAATAATTCATT
CTTCATTGGGAATTGGATTTTCATTAAGTTAGAGAGCTTATCGAATAGTA
GTAGAGTGTCGTTTATGAGAAGTTCTTGTTGATGGTAACTCTCAATATTA
TCGAATAATGAAGCGTATTGAATAGTAGGACGTCGAATTAGAGAATGTCC
ACTATACTCTAAAACTTTATGATCATTTTCAGCCAAGACCAATGTCAATA
GAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAGCTATATTGCAT
GGAGTTATCAGGTACATAGTTTTATGAATTTCTTTATTAGAGTAAACACC
AACTCAATAGTACAAGATTTCAGGGGGAGTACTAGGATTGCGAGGTGACG
GGCATGTTCGAGCCAAAAACGATCCTTTGAGAGACTGAATTTCGAACATT
TTGACTCTTTTTGACGTCTTAACGGCCAATTTTGAGTCGATTTTTCTTGA
TTTTTTCAGAGACTTTATTGCTTTATGGTCTATGTACCCCTTTGATAGAT
TTTCGATGGTGTAAAAAACGACCCTTATGGCTCGCACATACCTGACACCC
ATTTTGTCTAAATTGCCACCCCCCCTCCTCCTCCTCTCCCCCTCCTCCCC
CCTCTCCTGGGACTAGGTTCGAACTCAAAGAGCAGAGATAATCTTTAATT
TCAAGAAACTTGTGATTTAGCGGTGTAGTTAAGGGTTATTGATCGATATC
TTTTGTTTTCAATTTAGGTCATTGGATGGATATTGGTCAACCAAAAGATT
TCATCACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCG
GAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCGTAAG
GATATTTTCTTGGTCATTGTGTTCGATAGGATTTCGCTCTACGCGTGTGC
ATTTGAGGGAGCACTACTGGGTCTGAGTGCCAAACTATTCTTCGTACCGG
GTGTCCCAGAAAAAAGTTCCTCTCTTTGAAGTGAGTTTTATTTCGAGTTC
TATCGACTTATAAAGAATCAATCATTTTGCATTGGAAAGAGGAAGGATAA
ACTTAAATTATGAAGGGTCATTTGTCAAATCTGGTCAACTTAATCAAAAG
ATCTAAATGCTAAAACATTACTTTTAAAAAAAAGTCGGTCAAAGTTGACA
GAAAAGTATTGTGCTTCATTGTTCATGTTTTGTTCCAGGATCCAACAGCT
AAAATCGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCATA
TGCCGTCATCGAAAAAGGTACGTTACGTTCTTATATAGAAATCTCATTTT
TCAGTAGGCAAAAATGTAAGGAATGTCGCCCCGCGATTGCCGATGATATT
GACCCTGTCTTTGGTTAGTTGTATTTGTTCATCACTGACCCTGTGTTCGT
GACACAGCAGAGCTAGGGCGTATAGGTAAAATTACTCTATCAAGCTTGGG
AGAACGATTTCTCTCACAAGCCTGGATGAAGTCACACTCGCTTGCCAAAT
GAATCGCAGCACCTAGTGAGAATCGAACCCTGGCCTTTATGGAAGCCAGG
GACGAAAACACTGCTATTTCTATAACTAAGCAAATCATTCTATTTTATCT
TCATTTAATTATTTTAAAGGTGCATGTTTATCCAATTGCATAGTCATGAG
AGGGGCGACCATTCGATCACATTCCTGGGTACGAGATTCAATTATCGGAT
GGAAATCAACTGTCGGACGATGGGTAGGTGTATTATTGTGTTTTTTATCA
ACTTCTTTCTTTTACACTTTTCTCTTAAAATTACCTGCTCCTCGGGAGAC
TGCTGATCTACCGATTCCAGACCATCTAAAAGGAACGACAAATAACTATT
AAAAAGCGACAAAAAGAAAGACTAACCCTAACTATCAAAGAACGACATAT
TTCACCGTCCCAAATCCCGATCTTGGTCAGTGACTACCATCTCTACACAT
TCATTACTCTTTGTACTTTACGCTGTTTAACGACTAGTGGTTTAAAGAAC
GATAAATCACGCTTGCCTATAAGTCTCAATTTGGGTGAGCTGGAAACATT
AGATGAACGAACTCTTGGAAATAGCCGCTGTAAAATGAATTGCCTGTATT
CTTATGTAGTTTTAAAAAGAAAACATTCCATTGTGATGGAACAATCAACT
TACAAACGCGCCCCATAAGTCTTTGCAAACTCAGCATTTTTTAATTGCCA
TTCAGACGTCATTTTTAATAAACGTTTTTTTTTTGGGGCATCTAAATTTT
TTGAAGCCTTGGGATGTTCTTAACTTTTTGGGTCTAAAACCTAGAAATGT
TCTTAAAATGTTCTTATTTTCACAATGTTTCCCCATTTTTCTATCAAAGC
GAGTGTTTTTGAGTCTTCAAAGCCTTAAAATGCTCTTAACTTGTTTTTAT
CGAAGCCTTAAGTTCTTATGATAGTTTTTTCTTATAGAAAACGTGTACTG
ACAATGCATAGCCATTCAGACGTCATTTTTTATACTGATAATGCAGCTCT
AATACCTCTTTTTCCTTTCATCAGGTCCGTATGGAAGGTGTATGCGTGCT
TGGAGAAGATGTCCATGTGAAGGATGAGATCTATTTAAATGGAGCTCGTG
TGCTACCTCATAAAACGATATCAGCCTCTGTTCCCGAACCCAATATTGTC
ATGTAGACTGGATAAGTTCTTTTTAACAACGTCTGTCAGTATTGTTGTCT
CATGTGAAGCTTTCAAAGTTTAAAGATTGAAACTAAGGCTTCTCAGTTAT
CAATTGGGTATGTTCTAAGTCTTTTTCAAAGAATTTGTTAAGGAAGACAA
GCTGAAGACTTTCAACTTCTATGAATATTATTTCTTTCGTTTTTAGAGTA
AACCCTTTTGATTTTTTTTCTAACTATAAGTGACGGGGCCCTACTATTCT
TATTTTTTTGTAACGGTTATTATAAAGGGTTCTGGGTAGGATATTTTTTA
AATGAATTATGTGTTATTTAATAAACATAAAAACTAATAGTTAGGACAAG
CAACTGGATAAATTTTTGTTCAAATGTATGGCTACAAATTTACCATTTCT
ATTCATGATATGCACCACTGGAGAGCCTTCCAAGAATTTTCAAAAAATTC
CAACCAATGTGAAATTTCTCAGAAGACTCTCCAGTGGTGCATATCATGAA
TTCTACCGCTTATAAGCGTTGAAATGTATTTATCAACCTTTGCGTTGCAA
GAGGATTGGGGCCGAATTTTTCCAGGGTTGTGTGATGTCAAATGTTGTTG
TTGCTGGCCAATGCATGATATGTACCATTGCAATATCTTCTGGCATTACA
TTATGGAACCAACAGCTGATTGGTTGCAATTTTACGTCACTTTCAACCAA
TCAGCTGTAGGGTCCGTAGAAGACATTGCAATGGTGCATTTCACGAATTG
CATTATGAAGTCATTCAACTCGGCTGACCTTTATATACCCTGGACACAGC
TTTTCGATACCGGCCAAACAGAATCTTTGATCGGAGTATTTTGAAAGTGA
TATTTTAATGATTTGTAAATTGACCCACATTGAGAAGTGCTACCATTAAG
GTTCCCTTTTTCTAAACTCTACAGGACAGTGTTCAACCATTGTAAACTTC
GGCCGAATCCTTTTGTGTGGTTCATAGTGGTATAACACCATGTTCGCATA
TAACGGTTCAGTTTCGCTCGGAAACGAAATGAAGCCATTCTATTGGTTAA
AAGTGACGTAAAACTTAAATTTAAACCAATAGGACGGCTTCATTTCGTTT
CGGAGTGAAACGGAACCGTATTGTGCGAACGTGGTCCAAGCTATTCTTCA
TATGTTTTATCAGCTTATTTTGATATTGCTGGTTATAGCTAACTATTAGT
TTTATCTTATTGTCTTATATCTATAGCTAAATTCAGGAAAGTCCTAGTCA
AAGACTTGC

Coding sequence (CDS) from alignment at sc0000052:333504..342112-

>TCONS_00005335 ID=TCONS_00005335|Name=TCONS_00005335|organism=Clytia hemisphaerica|type=CDS|length=10830bp|location=Sequence derived from alignment at sc0000052:333504..342112- (Clytia hemisphaerica)
GTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGA
TGAGATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAG
CCTCTGTTCCCGAACCCAATATTGTCATGTAGGTGCATGTTTATCCAATT
GCATAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTACGAGAT
TCAATTATCGGATGGAAATCAACTGTCGGACGATGGGATCCAACAGCTAA
AATCGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCATATG
CCGTCATCGAAAAAGGTCATTGGATGGATATTGGTCAACCAAAAGATTTC
ATCACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCGGA
AGTCTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCCCAAGAC
CAATGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAG
CTATATTGCATGGAGTTATCAGGTCACCAAAGTAGAAGAACCTTCAAAAT
ATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTC
GAGAAACCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATAT
ATTTAGCCCGAGCATATTGAAAAGGATAGAGCTGGTCCATTAGCACTTGC
TAAACATTGGCTGGAAGAATCAGATGAACCTTTCTTTGTTTTGAACTGTG
ATATTACAAGTGAATTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAA
CATGGAAAAGAAGGAACAATTGTACTTGGTATCAAATTTAGTATGTCACA
CGAAGTTGAACCATTAGGAACAGGCTGGTGTTGATCATGTCATTTTGGCT
GTTAGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGA
AAAGATGAAAGCTTTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGAC
CCTTAACATTGACAAGACCAAAACCACTTGTTGAATTTTGTAATAAACCA
ACACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGTCCGTATGGAAGGTGT
ATGCGTGCTTGGAGAAGATGTCCATGTGAAGGATGAGATCTATTTAAATG
GAGCTCGTGTGCTACCTCATAAAACGATATCAGCCTCTGTTCCCGAACCC
AATATTGTCATGTAGGTGCATGTTTATCCAATTGCATAGTCATGAGAGGG
GCGACCATTCGATCACATTCCTGGGTACGAGATTCAATTATCGGATGGAA
ATCAACTGTCGGACGATGGGATCCAACAGCTAAAATCGAGCCCGAATGTC
AAATAGGACCAAATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGGT
CATTGGATGGATATTGGTCAACCAAAAGATTTCATCACTGGAACCAAATT
ACATTTAAATTCATTACGGAGGAGAAATGCGGAAGTCTTATACGATGGAG
AAGGTGTTCGAGGAAATGTTTTTACCCCAAGACCAATGTCAATAGAAAAA
GAAGTCTTCCCATATATGGCAAATGATAGCCAGCTATATTGCATGGAGTT
ATCAGGTCACCAAAGTAGAAGAACCTTCAAAATATGGGGTTGTCGTTTAT
GAAGAAGACTCAGGCAAAATCAACAGCTTTGTCGAGAAACCAAAAGAATA
CGTCTCTAATAAAATCAATGCTGGAATGTATATATTTAGCCCGAGCATAT
TGAAAAGGATAGAGCTGGTCCATTAGCACTTGCTAAACATTGGCTGGAAG
AATCAGATGAACCTTTCTTTGTTTTGAACTGTGATATTACAAGTGAATTC
CCTTTCAAGCAAATGTTAGAATTCCATAAGAAACATGGAAAAGAAGGAAC
AATTGTACTTGGTATCAAATTTAGTATGTCACACGAAGTTGAACCATTAG
GAACAGGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTTATCAGA
AATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGATGAAAGCTTTGA
TTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGACAAGA
CCAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACCAAGT
GGAAGCTTTGGCTGCTGTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAG
ATGTCCATGTGAAGGATGAGATCTATTTAAATGGAGCTCGTGTGCTACCT
CATAAAACGATATCAGCCTCTGTTCCCGAACCCAATATTGTCATGTAGGT
GCATGTTTATCCAATTGCATAGTCATGAGAGGGGCGACCATTCGATCACA
TTCCTGGGTACGAGATTCAATTATCGGATGGAAATCAACTGTCGGACGAT
GGGATCCAACAGCTAAAATCGAGCCCGAATGTCAAATAGGACCAAATGTC
GTTATAGGACCATATGCCGTCATCGAAAAAGGTCATTGGATGGATATTGG
TCAACCAAAAGATTTCATCACTGGAACCAAATTACATTTAAATTCATTAC
GGAGGAGAAATGCGGAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAAT
GTTTTTACCCCAAGACCAATGTCAATAGAAAAAGAAGTCTTCCCATATAT
GGCAAATGATAGCCAGCTATATTGCATGGAGTTATCAGGTCACCAAAGTA
GAAGAACCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAA
AATCAACAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAAAATCA
ATGCTGGAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAGAGCTG
GTCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGAACCTTTC
TTTGTTTTGAACTGTGATATTACAAGTGAATTCCCTTTCAAGCAAATGTT
AGAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTACTTGGTATCA
AATTTAGTATGTCACACGAAGTTGAACCATTAGGAACAGGCTGGTGTTGA
TCATGTCATTTTGGCTGTTAGTTATTTATCAGAAATGCTTGAAAATGAAC
TTCGCAAGGAGGAAGAAAAGATGAAAGCTTTGATTCTTGTTGGAGGGTAC
GGAACTCGTCTGAGACCCTTAACATTGACAAGACCAAAACCACTTGTTGA
ATTTTGTAATAAACCAACACTTTTGCACCAAGTGGAAGCTTTGGCTGCTG
TCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGAT
GAGATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAGC
CTCTGTTCCCGAACCCAATATTGTCATGTAGGTGCATGTTTATCCAATTG
CATAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTACGAGATT
CAATTATCGGATGGAAATCAACTGTCGGACGATGGGATCCAACAGCTAAA
ATCGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCATATGC
CGTCATCGAAAAAGGTCATTGGATGGATATTGGTCAACCAAAAGATTTCA
TCACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCGGAA
GTCTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCCCAAGACC
AATGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAGC
TATATTGCATGGAGTTATCAGGTCACCAAAGTAGAAGAACCTTCAAAATA
TGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTCG
AGAAACCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATATA
TTTAGCCCGAGCATATTGAAAAGGATAGAGCTGGTCCATTAGCACTTGCT
AAACATTGGCTGGAAGAATCAGATGAACCTTTCTTTGTTTTGAACTGTGA
TATTACAAGTGAATTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAAC
ATGGAAAAGAAGGAACAATTGTACTTGGTATCAAATTTAGTATGTCACAC
GAAGTTGAACCATTAGGAACAGGCTGGTGTTGATCATGTCATTTTGGCTG
TTAGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAA
AAGATGAAAGCTTTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACC
CTTAACATTGACAAGACCAAAACCACTTGTTGAATTTTGTAATAAACCAA
CACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGTCCGTATGGAAGGTGTA
TGCGTGCTTGGAGAAGATGTCCATGTGAAGGATGAGATCTATTTAAATGG
AGCTCGTGTGCTACCTCATAAAACGATATCAGCCTCTGTTCCCGAACCCA
ATATTGTCATGTAGGTGCATGTTTATCCAATTGCATAGTCATGAGAGGGG
CGACCATTCGATCACATTCCTGGGTACGAGATTCAATTATCGGATGGAAA
TCAACTGTCGGACGATGGGATCCAACAGCTAAAATCGAGCCCGAATGTCA
AATAGGACCAAATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGGTC
ATTGGATGGATATTGGTCAACCAAAAGATTTCATCACTGGAACCAAATTA
CATTTAAATTCATTACGGAGGAGAAATGCGGAAGTCTTATACGATGGAGA
AGGTGTTCGAGGAAATGTTTTTACCCCAAGACCAATGTCAATAGAAAAAG
AAGTCTTCCCATATATGGCAAATGATAGCCAGCTATATTGCATGGAGTTA
TCAGGTCACCAAAGTAGAAGAACCTTCAAAATATGGGGTTGTCGTTTATG
AAGAAGACTCAGGCAAAATCAACAGCTTTGTCGAGAAACCAAAAGAATAC
GTCTCTAATAAAATCAATGCTGGAATGTATATATTTAGCCCGAGCATATT
GAAAAGGATAGAGCTGGTCCATTAGCACTTGCTAAACATTGGCTGGAAGA
ATCAGATGAACCTTTCTTTGTTTTGAACTGTGATATTACAAGTGAATTCC
CTTTCAAGCAAATGTTAGAATTCCATAAGAAACATGGAAAAGAAGGAACA
ATTGTACTTGGTATCAAATTTAGTATGTCACACGAAGTTGAACCATTAGG
AACAGGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTTATCAGAA
ATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGATGAAAGCTTTGAT
TCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGACAAGAC
CAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACCAAGTG
GAAGCTTTGGCTGCTGTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGA
TGTCCATGTGAAGGATGAGATCTATTTAAATGGAGCTCGTGTGCTACCTC
ATAAAACGATATCAGCCTCTGTTCCCGAACCCAATATTGTCATGTAGGTG
CATGTTTATCCAATTGCATAGTCATGAGAGGGGCGACCATTCGATCACAT
TCCTGGGTACGAGATTCAATTATCGGATGGAAATCAACTGTCGGACGATG
GGATCCAACAGCTAAAATCGAGCCCGAATGTCAAATAGGACCAAATGTCG
TTATAGGACCATATGCCGTCATCGAAAAAGGTCATTGGATGGATATTGGT
CAACCAAAAGATTTCATCACTGGAACCAAATTACATTTAAATTCATTACG
GAGGAGAAATGCGGAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAATG
TTTTTACCCCAAGACCAATGTCAATAGAAAAAGAAGTCTTCCCATATATG
GCAAATGATAGCCAGCTATATTGCATGGAGTTATCAGGTCACCAAAGTAG
AAGAACCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAA
ATCAACAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAAAATCAA
TGCTGGAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAGAGCTGG
TCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGAACCTTTCT
TTGTTTTGAACTGTGATATTACAAGTGAATTCCCTTTCAAGCAAATGTTA
GAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTACTTGGTATCAA
ATTTAGTATGTCACACGAAGTTGAACCATTAGGAACAGGCTGGTGTTGAT
CATGTCATTTTGGCTGTTAGTTATTTATCAGAAATGCTTGAAAATGAACT
TCGCAAGGAGGAAGAAAAGATGAAAGCTTTGATTCTTGTTGGAGGGTACG
GAACTCGTCTGAGACCCTTAACATTGACAAGACCAAAACCACTTGTTGAA
TTTTGTAATAAACCAACACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGT
CCGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGATG
AGATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAGCC
TCTGTTCCCGAACCCAATATTGTCATGTAGGTGCATGTTTATCCAATTGC
ATAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTACGAGATTC
AATTATCGGATGGAAATCAACTGTCGGACGATGGGATCCAACAGCTAAAA
TCGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCATATGCC
GTCATCGAAAAAGGTCATTGGATGGATATTGGTCAACCAAAAGATTTCAT
CACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCGGAAG
TCTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCCCAAGACCA
ATGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAGCT
ATATTGCATGGAGTTATCAGGTCACCAAAGTAGAAGAACCTTCAAAATAT
GGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTCGA
GAAACCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATATAT
TTAGCCCGAGCATATTGAAAAGGATAGAGCTGGTCCATTAGCACTTGCTA
AACATTGGCTGGAAGAATCAGATGAACCTTTCTTTGTTTTGAACTGTGAT
ATTACAAGTGAATTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAACA
TGGAAAAGAAGGAACAATTGTACTTGGTATCAAATTTAGTATGTCACACG
AAGTTGAACCATTAGGAACAGGCTGGTGTTGATCATGTCATTTTGGCTGT
TAGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAA
AGATGAAAGCTTTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCC
TTAACATTGACAAGACCAAAACCACTTGTTGAATTTTGTAATAAACCAAC
ACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGTCCGTATGGAAGGTGTAT
GCGTGCTTGGAGAAGATGTCCATGTGAAGGATGAGATCTATTTAAATGGA
GCTCGTGTGCTACCTCATAAAACGATATCAGCCTCTGTTCCCGAACCCAA
TATTGTCATGTAGGTGCATGTTTATCCAATTGCATAGTCATGAGAGGGGC
GACCATTCGATCACATTCCTGGGTACGAGATTCAATTATCGGATGGAAAT
CAACTGTCGGACGATGGGATCCAACAGCTAAAATCGAGCCCGAATGTCAA
ATAGGACCAAATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGGTCA
TTGGATGGATATTGGTCAACCAAAAGATTTCATCACTGGAACCAAATTAC
ATTTAAATTCATTACGGAGGAGAAATGCGGAAGTCTTATACGATGGAGAA
GGTGTTCGAGGAAATGTTTTTACCCCAAGACCAATGTCAATAGAAAAAGA
AGTCTTCCCATATATGGCAAATGATAGCCAGCTATATTGCATGGAGTTAT
CAGGTCACCAAAGTAGAAGAACCTTCAAAATATGGGGTTGTCGTTTATGA
AGAAGACTCAGGCAAAATCAACAGCTTTGTCGAGAAACCAAAAGAATACG
TCTCTAATAAAATCAATGCTGGAATGTATATATTTAGCCCGAGCATATTG
AAAAGGATAGAGCTGGTCCATTAGCACTTGCTAAACATTGGCTGGAAGAA
TCAGATGAACCTTTCTTTGTTTTGAACTGTGATATTACAAGTGAATTCCC
TTTCAAGCAAATGTTAGAATTCCATAAGAAACATGGAAAAGAAGGAACAA
TTGTACTTGGTATCAAATTTAGTATGTCACACGAAGTTGAACCATTAGGA
ACAGGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTTATCAGAAA
TGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGATGAAAGCTTTGATT
CTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGACAAGACC
AAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACCAAGTGG
AAGCTTTGGCTGCTGTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGAT
GTCCATGTGAAGGATGAGATCTATTTAAATGGAGCTCGTGTGCTACCTCA
TAAAACGATATCAGCCTCTGTTCCCGAACCCAATATTGTCATGTAGGTGC
ATGTTTATCCAATTGCATAGTCATGAGAGGGGCGACCATTCGATCACATT
CCTGGGTACGAGATTCAATTATCGGATGGAAATCAACTGTCGGACGATGG
GATCCAACAGCTAAAATCGAGCCCGAATGTCAAATAGGACCAAATGTCGT
TATAGGACCATATGCCGTCATCGAAAAAGGTCATTGGATGGATATTGGTC
AACCAAAAGATTTCATCACTGGAACCAAATTACATTTAAATTCATTACGG
AGGAGAAATGCGGAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAATGT
TTTTACCCCAAGACCAATGTCAATAGAAAAAGAAGTCTTCCCATATATGG
CAAATGATAGCCAGCTATATTGCATGGAGTTATCAGGTCACCAAAGTAGA
AGAACCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAA
TCAACAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAAAATCAAT
GCTGGAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAGAGCTGGT
CCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGAACCTTTCTT
TGTTTTGAACTGTGATATTACAAGTGAATTCCCTTTCAAGCAAATGTTAG
AATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTACTTGGTATCAAA
TTTAGTATGTCACACGAAGTTGAACCATTAGGAACAGGCTGGTGTTGATC
ATGTCATTTTGGCTGTTAGTTATTTATCAGAAATGCTTGAAAATGAACTT
CGCAAGGAGGAAGAAAAGATGAAAGCTTTGATTCTTGTTGGAGGGTACGG
AACTCGTCTGAGACCCTTAACATTGACAAGACCAAAACCACTTGTTGAAT
TTTGTAATAAACCAACACTTTTGCACCAAGTGGAAGCTTTGGCTGCTGTC
CGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGATGA
GATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAGCCT
CTGTTCCCGAACCCAATATTGTCATGTAGGTGCATGTTTATCCAATTGCA
TAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTACGAGATTCA
ATTATCGGATGGAAATCAACTGTCGGACGATGGGATCCAACAGCTAAAAT
CGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCATATGCCG
TCATCGAAAAAGGTCATTGGATGGATATTGGTCAACCAAAAGATTTCATC
ACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCGGAAGT
CTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCCCAAGACCAA
TGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAGCTA
TATTGCATGGAGTTATCAGGTCACCAAAGTAGAAGAACCTTCAAAATATG
GGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTCGAG
AAACCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATATATT
TAGCCCGAGCATATTGAAAAGGATAGAGCTGGTCCATTAGCACTTGCTAA
ACATTGGCTGGAAGAATCAGATGAACCTTTCTTTGTTTTGAACTGTGATA
TTACAAGTGAATTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAACAT
GGAAAAGAAGGAACAATTGTACTTGGTATCAAATTTAGTATGTCACACGA
AGTTGAACCATTAGGAACAGGCTGGTGTTGATCATGTCATTTTGGCTGTT
AGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAA
GATGAAAGCTTTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCT
TAACATTGACAAGACCAAAACCACTTGTTGAATTTTGTAATAAACCAACA
CTTTTGCACCAAGTGGAAGCTTTGGCTGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003035XLOC_003035Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005335-proteinTCONS_00005335-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005335-exon-sc0000052-1575043694:342062..342112TCONS_00005335-exon-sc0000052-1575043694:342062..342112Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:341376..341592TCONS_00005335-exon-sc0000052-1575043694:341376..341592Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:339404..339484TCONS_00005335-exon-sc0000052-1575043694:339404..339484Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:339120..339168TCONS_00005335-exon-sc0000052-1575043694:339120..339168Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:338203..338345TCONS_00005335-exon-sc0000052-1575043694:338203..338345Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:337672..337830TCONS_00005335-exon-sc0000052-1575043694:337672..337830Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:337152..337230TCONS_00005335-exon-sc0000052-1575043694:337152..337230Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:336568..336695TCONS_00005335-exon-sc0000052-1575043694:336568..336695Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:336146..336224TCONS_00005335-exon-sc0000052-1575043694:336146..336224Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:335690..335793TCONS_00005335-exon-sc0000052-1575043694:335690..335793Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1575043694:333504..334888TCONS_00005335-exon-sc0000052-1575043694:333504..334888Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:342062..342112TCONS_00005335-exon-sc0000052-1510915933:342062..342112Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:341376..341592TCONS_00005335-exon-sc0000052-1510915933:341376..341592Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:339404..339484TCONS_00005335-exon-sc0000052-1510915933:339404..339484Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:339120..339168TCONS_00005335-exon-sc0000052-1510915933:339120..339168Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:338203..338345TCONS_00005335-exon-sc0000052-1510915933:338203..338345Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:337672..337830TCONS_00005335-exon-sc0000052-1510915933:337672..337830Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:337152..337230TCONS_00005335-exon-sc0000052-1510915933:337152..337230Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:336568..336695TCONS_00005335-exon-sc0000052-1510915933:336568..336695Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:336146..336224TCONS_00005335-exon-sc0000052-1510915933:336146..336224Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:335690..335793TCONS_00005335-exon-sc0000052-1510915933:335690..335793Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1510915933:333504..334888TCONS_00005335-exon-sc0000052-1510915933:333504..334888Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:342062..342112TCONS_00005335-exon-sc0000052-1491911889:342062..342112Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:341376..341592TCONS_00005335-exon-sc0000052-1491911889:341376..341592Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:339404..339484TCONS_00005335-exon-sc0000052-1491911889:339404..339484Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:339120..339168TCONS_00005335-exon-sc0000052-1491911889:339120..339168Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:338203..338345TCONS_00005335-exon-sc0000052-1491911889:338203..338345Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:337672..337830TCONS_00005335-exon-sc0000052-1491911889:337672..337830Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:337152..337230TCONS_00005335-exon-sc0000052-1491911889:337152..337230Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:336568..336695TCONS_00005335-exon-sc0000052-1491911889:336568..336695Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:336146..336224TCONS_00005335-exon-sc0000052-1491911889:336146..336224Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:335690..335793TCONS_00005335-exon-sc0000052-1491911889:335690..335793Clytia hemisphaericaexon
TCONS_00005335-exon-sc0000052-1491911889:333504..334888TCONS_00005335-exon-sc0000052-1491911889:333504..334888Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:333504..342112 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14259e-07	1.16324	8.36698e-06	1.72148	7.57779	1.72165	1.79482	2.1447	1.26734	8.67795e-06	0.000297332	0.895462	0.0436645	2.1537e-06	1.2917e-06	0.656505	0.00139451	6.65662e-06	0.00302694	4.88292	0.778438	0	0	1.51292e-06	1.37677	5.28664	11.3204	1.37477e-06	0.000226818	9.69615e-08
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005835NTP_transferase_dom
IPR001451Hexapep
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0016779 nucleotidyltransferase activity
Blast
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BLAST of TCONS_00005335 vs. Swiss-Prot (Human)
Match: GMPPB (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 469.159 bits (1206), Expect = 4.192e-158
Identity = 241/360 (66.94%), Postives = 292/360 (81.11%), Query Frame = 2 
Query:  140 MKALILVGGYGXXXXXXXXXXXXXXVEFCNKPTLLHQVEALAAAGVDHVILAVSYLSXXXXXXXXXXXXXXGIKFSMSHEVEPLGTAGPLALAKHWLEESDEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYEEDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPYMANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGVRGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSHSWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTISASVPEPNIVM 1219
            MKALILVGGYGTRLRPLTL+ PKPLV+FCNKP LLHQVEALAAAGVDHVILAVSY+S++LE E++ +E++LGI+ SMSHE EPLGTAGPLALA+  L E+ +PFFVLN D+  +FPF+ M++FH+ HG+EG+I+VTKVEEPSKYGVVV E D+G+I+ FVEKP+ +VSNKINAGMYI SP++L+RI+ +P SIEKEVFP MA + QLY MEL G WMDIGQPKDF+TG  L L SLR++  E L  G G+ GNV  DP+A+I   C IGPNV +GP  V+E G C+  C V+R A IRSHSW+   I+GW+  VG+WVRME V VLGEDV V DE+YLNGA VLPHK+I  SVPEP I+M
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360
The following BLAST results are available for this feature:
BLAST of TCONS_00005335 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GMPPB4.192e-15866.94Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
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