TCONS_00005335-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005335-protein
Unique NameTCONS_00005335-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005335-protein ID=TCONS_00005335-protein|Name=TCONS_00005335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MKALILVGGYGTRLRPLTLTRPKPLVEFCNKPTLLHQVEALAAAGVDHVI
LAVSYLSEMLENELRKEEEKLGIKFSMSHEVEPLGTAGPLALAKHWLEES
DEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYE
EDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPY
MANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGV
RGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSH
SWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTIS
ASVPEPNIVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003035XLOC_003035Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005335TCONS_00005335Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005835NTP_transferase_dom
IPR001451Hexapep
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0016779 nucleotidyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005835Nucleotidyl transferase domainPFAMPF00483NTP_transferasecoord: 2..229
e-value: 1.8E-49
score: 168.5
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 253..281
e-value: 3.8E-6
score: 26.3
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..230
e-value: 8.0E-65
score: 218.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..310
NoneNo IPR availableGENE3D2.160.10.10coord: 231..358
e-value: 1.2E-21
score: 76.3
NoneNo IPR availableCDDcd06425M1P_guanylylT_B_like_Ncoord: 1..233
e-value: 8.50307E-157
score: 442.035

Blast
[Close]
BLAST of TCONS_00005335-protein vs. Swiss-Prot (Human)
Match: GMPPB (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0
Identity = 241/360 (66.94%), Postives = 292/360 (81.11%), Query Frame = 0 
Query:    1 MKALILVGGYGTRLRPLTLTRPKPLVEFCNKPTLLHQVEALAAAGVDHVILAVSYLSEMLENELRKEEEKLGIKFSMSHEVEPLGTAGPLALAKHWLEESDEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYEEDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPYMANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGVRGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSHSWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTISASVPEPNIVM 360
            MKALILVGGYGTRLRPLTL+ PKPLV+FCNKP LLHQVEALAAAGVDHVILAVSY+S++LE E++ +E++LGI+ SMSHE EPLGTAGPLALA+  L E+ +PFFVLN D+  +FPF+ M++FH+ HG+EG+I+VTKVEEPSKYGVVV E D+G+I+ FVEKP+ +VSNKINAGMYI SP++L+RI+ +P SIEKEVFP MA + QLY MEL G WMDIGQPKDF+TG  L L SLR++  E L  G G+ GNV  DP+A+I   C IGPNV +GP  V+E G C+  C V+R A IRSHSW+   I+GW+  VG+WVRME V VLGEDV V DE+YLNGA VLPHK+I  SVPEP I+M
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360
The following BLAST results are available for this feature:
BLAST of TCONS_00005335-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GMPPB0.000e+066.94Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
back to top